19 LOC_Os02g14310 hypothetical protein gene hypothetical protein chr2 7857115 7857522 + CDS,downstream 19 LOC_Os10g06520 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 3343680 3352303 - CDS,downstream 19 LOC_Os02g39670 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr2 23960206 23962653 + CDS 19 LOC_Os06g06590 expressed protein gene expressed protein chr6 3095000 3096884 - CDS,promoter,downstream 19 LOC_Os05g15580 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 8821982 8831782 + CDS 19 LOC_Os09g04690 hypothetical protein gene hypothetical protein chr9 2496167 2496809 - CDS 19 LOC_Os09g08464 ATP synthase B chain, putative gene ATP synthase B chain, putative chr9 4416891 4417372 + five_prime_UTR,CDS,three_prime_UTR,downstream 19 LOC_Os11g28628 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 16082298 16084842 - CDS,promoter,downstream 19 LOC_Os12g20110 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11687039 11693043 + CDS,promoter 19 LOC_Os10g11090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 6151386 6153128 + CDS,downstream 19 LOC_Os07g22310 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12503421 12510725 - CDS 19 LOC_Os10g16550 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 8176507 8181568 + CDS,downstream 19 LOC_Os05g01850 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 501364 504223 - CDS,promoter 19 LOC_Os10g09960 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 5417288 5418385 + CDS,promoter,downstream 19 LOC_Os12g28159 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 16626013 16629066 + CDS,promoter,downstream 19 LOC_Os12g43220 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 26788128 26795471 - CDS 19 LOC_Os04g06080 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 3153508 3157941 + CDS,promoter 19 LOC_Os10g09450 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 5113000 5113440 + CDS,promoter,downstream 19 LOC_Os07g35480 glucan endo-1,3-beta-glucosidase precursor, putative, expressed gene glucan endo-1,3-beta-glucosidase precursor, putative, expressed chr7 21222257 21224918 - CDS 19 LOC_Os09g39980 ubiquitin family protein, putative, expressed gene ubiquitin family protein, putative, expressed chr9 22924984 22928257 - CDS,downstream 19 LOC_Os01g18650 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 10500595 10503168 - CDS,promoter,downstream 19 LOC_Os03g23870 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 13546725 13549916 - CDS,promoter 19 LOC_Os02g22740 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 13540933 13542582 - CDS,promoter 19 LOC_Os08g23390 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 14138291 14140095 + CDS,downstream 19 LOC_Os05g17430 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10006545 10008737 - CDS 19 LOC_Os04g17810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9757570 9758284 + CDS,promoter,downstream 19 LOC_Os01g31040 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 16975660 16978058 + five_prime_UTR,CDS,promoter 19 LOC_Os10g09070 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 4923162 4924477 - CDS,promoter,downstream 19 LOC_Os10g09460 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5114111 5121039 - CDS,promoter,downstream 19 LOC_Os10g21336 unknown gene unknown chr10 10812166 10812488 - CDS,downstream 19 LOC_Os09g06140 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2875363 2876549 + CDS,promoter 19 LOC_Os12g23630 ATP synthase subunit alpha, mitochondrial, putative gene ATP synthase subunit alpha, mitochondrial, putative chr12 13410274 13410561 - CDS,promoter 19 LOC_Os01g30980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16930759 16936372 - CDS,promoter 19 LOC_Os02g21980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 13068447 13075373 - CDS,downstream 19 LOC_Os04g26834 eukaryotic aspartyl protease domain containing protein, expressed gene eukaryotic aspartyl protease domain containing protein, expressed chr4 15672586 15681818 - CDS,promoter 19 LOC_Os10g16560 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 8182919 8190980 + CDS,promoter 19 LOC_Os07g16690 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9789904 9792024 + CDS,downstream 19 LOC_Os01g30962 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16915152 16915865 + CDS,promoter,downstream 19 LOC_Os04g06840 conserved hypothetical protein gene conserved hypothetical protein chr4 3602963 3604207 + CDS 19 LOC_Os08g21690 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 12954994 12961258 + CDS,promoter,downstream 19 LOC_Os07g20910 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12096529 12100749 + CDS,promoter 19 LOC_Os04g02550 expressed protein gene expressed protein chr4 940184 942304 - five_prime_UTR,CDS,three_prime_UTR,downstream 19 LOC_Os06g06580 conserved hypothetical protein gene conserved hypothetical protein chr6 3092919 3094988 + CDS,downstream 19 LOC_Os03g23790 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13483867 13485753 + CDS,promoter 19 LOC_Os06g28400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 16159253 16159966 + CDS,downstream 19 LOC_Os08g23400 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 14140381 14144832 + CDS,promoter 19 LOC_Os12g09220 expressed protein gene expressed protein chr12 4813524 4817484 - five_prime_UTR 19 LOC_Os07g20950 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 12116784 12117539 + CDS,promoter,downstream 19 LOC_Os02g23821 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 13727907 13732331 - CDS,promoter 19 LOC_Os04g18770 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 10426309 10431642 + CDS 19 LOC_Os12g23590 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 13365582 13369632 - CDS,downstream 19 LOC_Os05g52070 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 29832457 29846986 - CDS 19 LOC_Os04g05300 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 2633729 2636911 + CDS,downstream 19 LOC_Os06g21670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 12511115 12512338 + CDS,promoter,downstream 19 LOC_Os10g15240 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 8006105 8010060 + CDS,downstream 19 LOC_Os05g36030 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr5 21272365 21273065 + CDS 19 LOC_Os12g28168 hypothetical protein gene hypothetical protein chr12 16629660 16630037 - CDS,promoter,downstream 19 LOC_Os03g49240 hypothetical protein gene hypothetical protein chr3 28036584 28037876 - CDS 19 LOC_Os10g09440 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5105605 5111912 - CDS,downstream 19 LOC_Os04g14620 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 8193420 8197810 + CDS 19 LOC_Os04g26800 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 15646989 15649465 - CDS,promoter,downstream 19 LOC_Os10g07616 chalcone synthase, putative gene chalcone synthase, putative chr10 4243440 4245680 + CDS 19 LOC_Os10g09950 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5412035 5414220 - CDS,promoter,downstream 19 LOC_Os10g15250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 8010735 8017210 - CDS,promoter 19 LOC_Os04g26720 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr4 15595123 15596857 + CDS 19 LOC_Os05g17460 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10027893 10031212 - CDS 19 LOC_Os08g11850 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 6948331 6952776 - CDS 19 LOC_Os04g39730 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 23489542 23495530 - CDS 19 LOC_Os06g01060 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 39328 47391 - CDS 19 LOC_Os02g26100 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 15327723 15330939 + CDS,promoter 19 LOC_Os12g14920 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 8533736 8536001 + CDS 19 LOC_Os10g15210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 7989557 7994871 + CDS 19 LOC_Os05g32340 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr5 18792582 18796906 + CDS 19 LOC_Os10g39880 photosynthetic reaction center protein, putative gene photosynthetic reaction center protein, putative chr10 21263132 21264305 + CDS,promoter 19 LOC_Os06g31050 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 18060105 18063587 - CDS,promoter 19 LOC_Os05g46900 hypothetical protein gene hypothetical protein chr5 27081521 27081721 + CDS,promoter,downstream 19 LOC_Os03g23180 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13387629 13389273 + CDS,promoter 19 LOC_Os01g29900 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16760879 16766388 + CDS,downstream 19 LOC_Os09g04460 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2370253 2378520 + CDS 19 LOC_Os03g23800 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13490474 13497208 - CDS,promoter,downstream 19 LOC_Os04g04890 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 2354093 2354893 + CDS,promoter,downstream 19 LOC_Os07g20670 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 11936220 11947843 - CDS 19 LOC_Os06g28410 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 16161417 16163522 + CDS,promoter 19 LOC_Os07g20630 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 11921132 11925807 + CDS 19 LOC_Os09g01110 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 118494 119763 - CDS,promoter 19 LOC_Os05g01840 hypothetical protein gene hypothetical protein chr5 499094 500440 + CDS,downstream 19 LOC_Os03g23760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr3 13459111 13467987 + CDS,promoter,downstream 19 LOC_Os04g14160 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 7911342 7912958 + CDS,promoter,downstream 19 LOC_Os08g21190 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 12650619 12652798 - CDS 19 LOC_Os12g25830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 14976024 14983193 - CDS 19 LOC_Os04g17520 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr4 9576850 9577562 - CDS,promoter 19 LOC_Os12g19690 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11467615 11469811 + CDS,downstream 19 LOC_Os11g02230 hypothetical protein gene hypothetical protein chr11 625870 627066 - CDS 19 LOC_Os06g21680 conserved hypothetical protein gene conserved hypothetical protein chr6 12512742 12513686 - CDS,promoter,downstream 19 LOC_Os09g07910 DNA-directed RNA polymerase subunit alpha, putative gene DNA-directed RNA polymerase subunit alpha, putative chr9 4036616 4037693 - CDS 19 LOC_Os02g32300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 19067640 19071968 - CDS,downstream 19 LOC_Os04g26660 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 15548695 15555307 + CDS 19 LOC_Os10g22150 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 11368637 11369029 + CDS,promoter 19 LOC_Os09g19954 ribosomal protein, putative gene ribosomal protein, putative chr9 11947923 11950067 + three_prime_UTR 19 LOC_Os08g22340 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 13459856 13465363 + CDS 19 LOC_Os04g17789 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9740132 9743225 - CDS,downstream 19 LOC_Os05g24680 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 14222699 14234932 - CDS 19 LOC_Os07g20890 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12083452 12089846 + CDS 19 LOC_Os05g17630 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10142260 10149270 - CDS 19 LOC_Os04g26710 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 15588684 15591801 - CDS 19 LOC_Os03g35326 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 19543006 19547607 + CDS,promoter,downstream 19 LOC_Os02g23820 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 13706103 13713388 - CDS,downstream 19 LOC_Os12g28128 hypothetical protein gene hypothetical protein chr12 16609030 16609407 - CDS,promoter,downstream 19 LOC_Os07g29500 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 17316986 17320814 - CDS 19 LOC_Os05g51930 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 29737715 29744645 - CDS,downstream 19 LOC_Os01g30940 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr1 16883519 16884232 - CDS,promoter 19 LOC_Os02g34300 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 20513325 20521093 + CDS,downstream 19 LOC_Os06g01050 hypothetical protein gene hypothetical protein chr6 32589 36124 + CDS,promoter 19 LOC_Os10g15230 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 8002081 8003618 + CDS 19 LOC_Os04g14150 dehydration response related protein, putative, expressed gene dehydration response related protein, putative, expressed chr4 7909036 7910573 + CDS,three_prime_UTR,downstream 19 LOC_Os06g01040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 17804 25538 - CDS 19 LOC_Os10g05849 unknown gene unknown chr10 2955808 2956009 - CDS,promoter,downstream 19 LOC_Os01g29804 expressed protein gene expressed protein chr1 16692935 16699719 + three_prime_UTR,downstream 19 LOC_Os12g43165 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr12 26771227 26775573 + five_prime_UTR,promoter,downstream 19 LOC_Os11g28619 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 16070429 16072973 - CDS,promoter,downstream 19 LOC_Os03g23780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr3 13476264 13481888 + CDS,downstream 19 LOC_Os05g22440 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 12680647 12684385 - CDS,promoter 19 LOC_Os09g23860 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 14225130 14228705 - CDS,promoter 19 LOC_Os06g17900 disease resistance protein RPM1, putative gene disease resistance protein RPM1, putative chr6 10386510 10389466 + CDS,downstream 19 LOC_Os07g16700 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9792310 9794766 + CDS,promoter 19 LOC_Os10g09050 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 4914689 4916712 - CDS,downstream 19 LOC_Os10g15180 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 7979175 7982045 - CDS,promoter,downstream 19 LOC_Os05g20560 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr5 12063627 12065147 + CDS,three_prime_UTR,promoter 19 LOC_Os04g26790 eukaryotic aspartyl protease domain containing protein, expressed gene eukaryotic aspartyl protease domain containing protein, expressed chr4 15622825 15644552 - CDS,three_prime_UTR,promoter 19 LOC_Os03g35330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 19567287 19568957 - CDS,promoter 19 LOC_Os05g46874 hypothetical protein gene hypothetical protein chr5 27067115 27072181 + CDS,downstream 19 LOC_Os12g19720 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11483743 11486535 + CDS 19 LOC_Os12g14480 cysteine-rich receptor-like protein kinase 23 precursor, putative gene cysteine-rich receptor-like protein kinase 23 precursor, putative chr12 8263718 8267530 - CDS,promoter 19 LOC_Os06g27340 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr6 15454249 15454962 + CDS,promoter 19 LOC_Os03g42530 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr3 23656716 23665786 + CDS,promoter 19 LOC_Os01g31020 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16960244 16972708 + CDS 19 LOC_Os07g04110 legume lectins beta domain containing protein, expressed gene legume lectins beta domain containing protein, expressed chr7 1742476 1744750 + CDS 19 LOC_Os01g30970 PMR5, putative, expressed gene PMR5, putative, expressed chr1 16927572 16928674 + five_prime_UTR,CDS,promoter,downstream 19 LOC_Os07g35070 OsFBX239 - F-box domain containing protein gene OsFBX239 - F-box domain containing protein chr7 21007413 21008863 + CDS 19 LOC_Os11g23970 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 13120277 13125785 - CDS 19 LOC_Os04g13510 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 7527262 7532713 - CDS 19 LOC_Os12g26500 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 15487076 15491568 - CDS 19 LOC_Os11g04620 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 1962165 1964246 + CDS 19 LOC_Os03g23860 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13538334 13543890 + CDS,promoter,downstream 19 LOC_Os06g11350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 5968231 5969041 - CDS 19 LOC_Os02g27380 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 16130523 16138359 + CDS 19 LOC_Os08g20220 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 12128792 12138872 + CDS 19 LOC_Os12g28150 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 16616434 16620306 + CDS,downstream 19 LOC_Os04g06130 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 3180198 3187681 - CDS,promoter,downstream 19 LOC_Os05g18340 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10558736 10564645 + CDS 19 LOC_Os05g21020 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 12363435 12368943 - CDS 19 LOC_Os10g03150 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 1329561 1331870 - CDS 19 LOC_Os07g16680 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 9784900 9785672 - CDS,downstream 19 LOC_Os01g39190 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 22045060 22050693 + CDS 19 LOC_Os10g05860 POEI7 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed gene POEI7 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed chr10 2957869 2959006 - three_prime_UTR,promoter 19 LOC_Os09g04260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2250505 2260956 + CDS 19 LOC_Os12g19700 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11470097 11480691 + CDS,promoter 19 LOC_Os04g26750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 15617588 15623092 + CDS,promoter,downstream 19 LOC_Os11g32770 ribulose bisphosphate carboxylase large chain precursor, putative gene ribulose bisphosphate carboxylase large chain precursor, putative chr11 18892285 18892608 - CDS,promoter 19 LOC_Os03g23770 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 13472678 13473775 - CDS,promoter 19 LOC_Os06g03370 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 1283505 1286411 - CDS,promoter 19 LOC_Os05g52060 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 29821513 29830144 - CDS 19 LOC_Os12g21470 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 12010366 12012512 + CDS,downstream 19 LOC_Os10g11100 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 6154595 6159688 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 19 LOC_Os07g13800 cytokinin-N-glucosyltransferase, putative, expressed gene cytokinin-N-glucosyltransferase, putative, expressed chr7 7906489 7908413 + CDS 19 LOC_Os03g35970 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 19949777 19954353 - CDS 19 LOC_Os11g12140 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 6763995 6765300 - CDS 19 LOC_Os04g06070 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 3146533 3153223 + CDS 19 LOC_Os12g28119 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 16605383 16608436 + CDS,promoter,downstream 19 LOC_Os07g03790 lectin-like receptor kinase 7, putative, expressed gene lectin-like receptor kinase 7, putative, expressed chr7 1582453 1584631 - CDS 19 LOC_Os12g21540 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 12107199 12109346 + CDS,promoter 19 LOC_Os12g23620 hypothetical protein gene hypothetical protein chr12 13406735 13407264 - CDS 19 LOC_Os05g52120 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 29888631 29894646 - five_prime_UTR,CDS,promoter 19 LOC_Os12g29710 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr12 17729944 17734518 - CDS 19 LOC_Os01g31000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16953377 16955738 + CDS,promoter 19 LOC_Os11g12720 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr11 7178387 7179099 - CDS,promoter 19 LOC_Os10g09060 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 4918966 4922475 - CDS,downstream 19 LOC_Os10g09500 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr10 5141927 5151514 + CDS,three_prime_UTR,promoter,downstream 19 LOC_Os04g04900 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 2355161 2359573 + CDS,promoter 19 LOC_Os09g17360 expressed protein gene expressed protein chr9 10623826 10625730 - five_prime_UTR,downstream 19 LOC_Os03g23110 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13359730 13365739 - CDS,promoter,downstream 19 LOC_Os04g05340 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 2651757 2655522 - CDS 19 LOC_Os12g14450 hypothetical protein gene hypothetical protein chr12 8241493 8242711 - CDS,promoter,downstream 19 LOC_Os12g21530 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr12 12105021 12105721 + CDS,promoter,downstream 19 LOC_Os08g11160 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr8 6561963 6562895 + CDS,promoter 19 LOC_Os09g06120 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2859564 2860276 + CDS,promoter 19 LOC_Os10g06190 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 3169313 3170630 + CDS,downstream 19 LOC_Os10g15170 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 7974529 7977928 + CDS,downstream 19 LOC_Os11g12710 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 7174116 7176945 - CDS,downstream 19 LOC_Os07g18240 lectin-like receptor kinase, putative, expressed gene lectin-like receptor kinase, putative, expressed chr7 10809108 10812197 - CDS 19 LOC_Os08g11870 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 6960243 6961523 - CDS 19 LOC_Os04g26820 hypothetical protein gene hypothetical protein chr4 15652752 15653685 + CDS,promoter,downstream 19 LOC_Os02g25280 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 14724820 14729038 - CDS 19 LOC_Os07g23980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 13572475 13576160 + CDS,promoter,downstream 19 LOC_Os04g26810 hypothetical protein gene hypothetical protein chr4 15651385 15652381 + CDS,promoter,downstream 19 LOC_Os05g39330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 23006516 23011807 + CDS 19 LOC_Os04g05310 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 2637579 2641906 - CDS,promoter 19 LOC_Os05g51720 hypothetical protein gene hypothetical protein chr5 29605801 29606193 - CDS,promoter,downstream 19 LOC_Os12g10110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 5348232 5349218 - CDS 19 LOC_Os11g11880 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr11 6586938 6590917 + CDS,promoter 19 LOC_Os04g05290 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 2627733 2631700 + CDS,promoter 19 LOC_Os10g09970 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5421604 5426606 - CDS,promoter,downstream 19 LOC_Os02g19870 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 11674414 11684362 - CDS 19 LOC_Os09g01100 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 110598 116009 - CDS 19 LOC_Os04g17798 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr4 9744695 9745406 - promoter,downstream 19 LOC_Os09g19952 ribosomal protein L22, putative gene ribosomal protein L22, putative chr9 11945746 11948200 + promoter,downstream 19 LOC_Os03g56040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 31903607 31905778 + promoter 19 LOC_Os10g21344 chloroplast 50S ribosomal protein L16, putative gene chloroplast 50S ribosomal protein L16, putative chr10 10813651 10815111 - promoter 19 LOC_Os08g11170 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 6563882 6565562 + promoter 19 LOC_Os09g06130 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2861748 2863903 + promoter,downstream 19 LOC_Os05g51970 hypothetical protein gene hypothetical protein chr5 29760601 29761080 - promoter 19 LOC_Os11g15170 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 8539801 8548384 + promoter 19 LOC_Os05g46940 hypothetical protein gene hypothetical protein chr5 27099218 27100421 + promoter 19 LOC_Os06g27350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 15456437 15458581 + promoter,downstream 19 LOC_Os10g21348 unknown gene unknown chr10 10816032 10816482 - promoter 19 LOC_Os10g21342 chloroplast 50S ribosomal protein L14, putative gene chloroplast 50S ribosomal protein L14, putative chr10 10813169 10813540 - promoter,downstream 19 LOC_Os06g21690 expressed protein gene expressed protein chr6 12536159 12537579 + promoter 19 LOC_Os05g42080 hypothetical protein gene hypothetical protein chr5 24555848 24556257 + promoter 19 LOC_Os10g38194 unknown gene unknown chr10 20381075 20381331 - promoter 19 LOC_Os12g28137 ATPase 3, putative, expressed gene ATPase 3, putative, expressed chr12 16614032 16616018 + promoter 19 LOC_Os02g39689 unknown gene unknown chr2 23967783 23968090 - promoter 19 LOC_Os06g08280 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr6 4007140 4012540 + promoter 19 LOC_Os07g21950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12271452 12273856 + promoter,downstream 19 LOC_Os01g59430 hypothetical protein gene hypothetical protein chr1 34374815 34375378 - promoter 19 LOC_Os05g51940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 29748167 29748919 - promoter 19 LOC_Os01g46720 expressed protein gene expressed protein chr1 26610755 26617660 + promoter 19 LOC_Os03g30040 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr3 17136621 17137452 - promoter 19 LOC_Os12g43179 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 26778901 26784854 - promoter 19 LOC_Os06g32580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 18950377 18951739 - promoter 19 LOC_Os06g03180 conserved hypothetical protein gene conserved hypothetical protein chr6 1193479 1198549 + promoter 19 LOC_Os12g14948 unknown gene unknown chr12 8545147 8545393 - promoter,downstream 19 LOC_Os11g27100 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 15130683 15132832 + promoter 19 LOC_Os12g28177 ATPase 3, putative, expressed gene ATPase 3, putative, expressed chr12 16634757 16636648 + promoter 19 LOC_Os02g23823 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr2 13753341 13761401 + promoter 19 LOC_Os05g07320 hypothetical protein gene hypothetical protein chr5 3894286 3894965 - promoter 19 LOC_Os02g05590 ribosome inactivating protein, putative gene ribosome inactivating protein, putative chr2 2712289 2712957 + promoter 19 LOC_Os03g49250 OsFBO16 - F-box and other domain containing protein, expressed gene OsFBO16 - F-box and other domain containing protein, expressed chr3 28039046 28041195 + promoter 19 LOC_Os09g08880 ATP synthase like protein, putative gene ATP synthase like protein, putative chr9 4691153 4692007 - promoter 19 LOC_Os05g36040 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr5 21274483 21278171 + promoter 19 LOC_Os05g46930 conserved hypothetical protein gene conserved hypothetical protein chr5 27098370 27098771 + promoter 19 LOC_Os11g12730 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 7179207 7184737 - promoter 19 LOC_Os06g01090 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 96225 100496 - promoter 19 LOC_Os01g71620 expressed protein gene expressed protein chr1 41485813 41493403 - promoter 19 LOC_Os06g17910 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr6 10396098 10398254 + promoter 19 LOC_Os12g35530 hypothetical protein gene hypothetical protein chr12 21569403 21569621 + promoter 19 LOC_Os02g53430 DNA-3-methyladenine glycosylase, putative, expressed gene DNA-3-methyladenine glycosylase, putative, expressed chr2 32689510 32691716 - promoter 19 LOC_Os12g20260 hypothetical protein gene hypothetical protein chr12 11819142 11820473 - promoter 19 LOC_Os04g17950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9861744 9862883 - promoter 19 LOC_Os02g39680 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 23964108 23966213 + promoter 19 LOC_Os01g31310 hypothetical protein gene hypothetical protein chr1 17134643 17135264 + promoter 19 LOC_Os05g33520 expressed protein gene expressed protein chr5 19628827 19631772 - promoter 19 LOC_Os07g16880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 9924496 9925701 - promoter 19 LOC_Os04g17940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9853098 9858060 - promoter,downstream 19 LOC_Os10g06180 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 3165108 3165548 + promoter,downstream 19 LOC_Os04g30440 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 18008073 18011962 - promoter 19 LOC_Os04g17840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9772029 9777537 - promoter 19 LOC_Os12g40200 conserved hypothetical protein gene conserved hypothetical protein chr12 24849179 24852034 - promoter 19 LOC_Os05g21230 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 12522517 12524911 - promoter 19 LOC_Os05g01860 hypothetical protein gene hypothetical protein chr5 505648 506039 - promoter 19 LOC_Os12g14960 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr12 8559512 8560324 - promoter 19 LOC_Os03g01020 pectinesterase inhibitor domain containing protein, putative, expressed gene pectinesterase inhibitor domain containing protein, putative, expressed chr3 25526 27075 + promoter 19 LOC_Os05g06170 FAR1 family protein gene FAR1 family protein chr5 3096808 3098842 - promoter 19 LOC_Os08g45260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 28428134 28430899 - promoter 19 LOC_Os06g26140 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 15293147 15294511 + promoter 19 LOC_Os12g18440 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 10662049 10662468 + promoter 19 LOC_Os03g46010 hypothetical protein gene hypothetical protein chr3 26007008 26008121 + promoter 19 LOC_Os10g38192 unknown gene unknown chr10 20380799 20381015 - promoter 19 LOC_Os10g09600 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 5203950 5204390 + promoter 19 LOC_Os04g17100 heavy metal-associated domain containing protein, expressed gene heavy metal-associated domain containing protein, expressed chr4 9358634 9359857 - promoter,downstream 19 LOC_Os03g23810 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13499284 13502134 - promoter 19 LOC_Os04g42240 expressed protein gene expressed protein chr4 24796912 24797897 - promoter 19 LOC_Os05g25060 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr5 14441285 14449369 - promoter 19 LOC_Os05g46954 expressed protein gene expressed protein chr5 27105926 27108757 + promoter,downstream 19 LOC_Os05g52104 unknown gene unknown chr5 29887201 29887419 + promoter 19 LOC_Os04g51430 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 30272828 30278218 + promoter 19 LOC_Os01g30956 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 16903759 16909147 + promoter,downstream 19 LOC_Os06g39700 DNA-directed RNA polymerase subunit alpha, putative gene DNA-directed RNA polymerase subunit alpha, putative chr6 23565357 23567409 + promoter 19 LOC_Os01g05940 receptor kinase, putative, expressed gene receptor kinase, putative, expressed chr1 2829325 2835425 + promoter 19 LOC_Os01g29910 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16832266 16842459 + promoter 19 LOC_Os04g06850 expressed protein gene expressed protein chr4 3604648 3609254 - promoter 19 LOC_Os04g17850 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 9786152 9792626 + promoter,downstream 19 LOC_Os08g21695 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 12968854 12970372 - promoter,downstream 19 LOC_Os12g24410 conserved hypothetical protein gene conserved hypothetical protein chr12 13922141 13929900 - promoter 19 LOC_Os01g31140 hypothetical protein gene hypothetical protein chr1 17032682 17032990 - promoter 19 LOC_Os01g58350 conserved hypothetical protein gene conserved hypothetical protein chr1 33712599 33714398 + promoter 19 LOC_Os12g23570 hypothetical protein gene hypothetical protein chr12 13343081 13345085 - promoter 19 LOC_Os04g17900 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9835572 9839072 + promoter 19 LOC_Os10g07618 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 4247246 4248233 + promoter 19 LOC_Os10g21338 unknown gene unknown chr10 10812619 10813029 - promoter,downstream 19 LOC_Os08g40180 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed gene 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed chr8 25423937 25428788 + promoter 19 LOC_Os11g30040 esterase PIR7, putative gene esterase PIR7, putative chr11 17006248 17007089 + promoter 19 LOC_Os10g11110 expressed protein gene expressed protein chr10 6161131 6167051 + promoter 19 LOC_Os04g17890 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9820943 9828800 + promoter,downstream 19 LOC_Os10g15190 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 7982932 7983958 + promoter 19 LOC_Os03g23120 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13367839 13369558 + promoter 19 LOC_Os11g44280 hypothetical protein gene hypothetical protein chr11 26290322 26290603 + promoter 19 LOC_Os09g06180 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2894556 2895859 + promoter 19 LOC_Os10g15160 conserved hypothetical protein gene conserved hypothetical protein chr10 7964595 7964903 + promoter 19 LOC_Os01g30932 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 16866854 16869246 - promoter 19 LOC_Os04g17860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9796658 9801142 - promoter,downstream 19 LOC_Os04g17530 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr4 9578936 9579418 - promoter 19 LOC_Os10g09510 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5151701 5154235 + promoter 19 LOC_Os04g06144 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 3189066 3201684 - promoter 19 LOC_Os01g60410 ubiquitin-conjugating enzyme, putative, expressed gene ubiquitin-conjugating enzyme, putative, expressed chr1 34936677 34940953 + promoter 19 LOC_Os12g20280 hypothetical protein gene hypothetical protein chr12 11841154 11842696 + promoter 19 LOC_Os07g36400 expressed protein gene expressed protein chr7 21759612 21763060 + promoter 19 LOC_Os05g17360 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 9960118 9964562 - promoter 19 LOC_Os03g19360 hypothetical protein gene hypothetical protein chr3 10900521 10902274 - promoter 19 LOC_Os09g19960 hypothetical protein gene hypothetical protein chr9 11949910 11951502 - promoter 19 LOC_Os04g17820 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9759757 9761175 + promoter,downstream 19 LOC_Os07g16920 hypothetical protein gene hypothetical protein chr7 9955008 9955325 - promoter 19 LOC_Os07g20930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12108420 12109070 + promoter 19 LOC_Os02g32310 hypothetical protein gene hypothetical protein chr2 19072431 19072844 + promoter 19 LOC_Os04g04914 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 2363231 2367854 + promoter 19 LOC_Os03g64300 THION30 - Plant thionin family protein precursor, expressed gene THION30 - Plant thionin family protein precursor, expressed chr3 36332953 36339823 + promoter 19 LOC_Os08g26150 hypothetical protein gene hypothetical protein chr8 15908518 15908969 - promoter 19 LOC_Os04g17830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9766398 9767748 + promoter,downstream 19 LOC_Os04g10590 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 5738083 5740190 + promoter 19 LOC_Os06g42710 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr6 25683526 25687067 + promoter 19 LOC_Os12g14030 hypothetical protein gene hypothetical protein chr12 7966295 7966555 - promoter 19 LOC_Os09g36150 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 20826782 20828631 + promoter 19 LOC_Os02g25030 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr2 14508321 14508554 + promoter 19 LOC_Os10g09470 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 5123835 5127007 + promoter 19 LOC_Os04g16736 photosystem I assembly protein ycf3, putative gene photosystem I assembly protein ycf3, putative chr4 9106014 9107992 - promoter 19 LOC_Os10g21346 chloroplast 30S ribosomal protein S3, putative, expressed gene chloroplast 30S ribosomal protein S3, putative, expressed chr10 10815257 10816029 - promoter 19 LOC_Os07g24992 uncharacterized protein ycf68, putative gene uncharacterized protein ycf68, putative chr7 14230705 14231106 - promoter 19 LOC_Os09g17220 hypothetical protein gene hypothetical protein chr9 10569471 10569870 + promoter 19 LOC_Os07g20730 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 11990463 11997605 - promoter 19 LOC_Os12g29714 hypothetical protein gene hypothetical protein chr12 17720777 17721313 - promoter 19 LOC_Os02g21990 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr2 13076893 13077966 - promoter 19 LOC_Os02g14320 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 7857951 7861703 + promoter 19 LOC_Os07g16550 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 9705459 9706500 - promoter 19 LOC_Os08g21474 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr8 12796837 12799277 + promoter 19 LOC_Os02g22800 conserved hypothetical protein gene conserved hypothetical protein chr2 13582299 13588851 - promoter 19 LOC_Os04g52614 SHR5-receptor-like kinase, putative, expressed gene SHR5-receptor-like kinase, putative, expressed chr4 31114588 31122620 - promoter 19 LOC_Os12g18840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 10913871 10918073 + promoter 19 LOC_Os07g16780 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9847154 9849058 + promoter 19 LOC_Os07g01010 hypothetical protein gene hypothetical protein chr7 1362 2134 + promoter 19 LOC_Os09g08470 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr9 4419207 4425072 - promoter 19 LOC_Os10g15340 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 8061196 8064945 - promoter 19 LOC_Os01g71558 phototropic-responsive NPH3 family protein, putative gene phototropic-responsive NPH3 family protein, putative chr1 41453333 41453998 - downstream 19 LOC_Os06g26130 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 15288366 15291158 + downstream 19 LOC_Os07g20720 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 11973851 11988988 - downstream 19 LOC_Os08g22540 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 13569261 13573738 - downstream 19 LOC_Os11g12130 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 6759749 6763708 - downstream 19 LOC_Os05g17420 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10001815 10006259 - downstream 19 LOC_Os12g14020 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 7963028 7963801 - downstream 19 LOC_Os03g42520 expressed protein gene expressed protein chr3 23654109 23656475 + downstream 19 LOC_Os05g46890 expressed protein gene expressed protein chr5 27076457 27079482 + downstream 19 LOC_Os10g09410 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5094493 5095566 - downstream 19 LOC_Os09g19950 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr9 11941964 11943252 + downstream 19 LOC_Os04g17510 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9569029 9575389 - downstream 19 LOC_Os04g32340 RNA-binding motif protein, putative, expressed gene RNA-binding motif protein, putative, expressed chr4 19211410 19219675 - downstream 19 LOC_Os03g62920 hypothetical protein gene hypothetical protein chr3 35593510 35593952 + downstream 19 LOC_Os04g52606 SHR5-receptor-like kinase, putative, expressed gene SHR5-receptor-like kinase, putative, expressed chr4 31100180 31110866 - downstream 19 LOC_Os04g42230 hypothetical protein gene hypothetical protein chr4 24792068 24792718 - downstream 19 LOC_Os05g46950 expressed protein gene expressed protein chr5 27100629 27104191 - downstream 19 LOC_Os12g43200 conserved hypothetical protein gene conserved hypothetical protein chr12 26787221 26787580 + downstream 19 LOC_Os08g22008 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 13209206 13214492 + downstream 19 LOC_Os02g22790 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 13572273 13578057 - downstream 19 LOC_Os09g24416 chloroplast 30S ribosomal protein S3, putative gene chloroplast 30S ribosomal protein S3, putative chr9 14507273 14507992 + downstream 19 LOC_Os10g21334 unknown gene unknown chr10 10811942 10812055 - downstream 19 LOC_Os12g18430 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr12 10658207 10659919 + downstream 19 LOC_Os10g05840 POEI6 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI6 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2949182 2950066 - downstream 19 LOC_Os12g23600 hypothetical protein gene hypothetical protein chr12 13375015 13375750 + downstream 19 LOC_Os02g15890 hypothetical protein gene hypothetical protein chr2 8992665 8994446 - downstream 19 LOC_Os02g46540 hypothetical protein gene hypothetical protein chr2 28376885 28377103 - downstream 19 LOC_Os06g01030 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 10524 17197 - downstream 19 LOC_Os03g50325 phosphatidylinositol 4-kinase, putative, expressed gene phosphatidylinositol 4-kinase, putative, expressed chr3 28693399 28698547 - downstream 19 LOC_Os05g01830 hypothetical protein gene hypothetical protein chr5 496871 498086 - downstream 19 LOC_Os07g16540 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9700980 9702285 - downstream 19 LOC_Os12g42500 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 26372110 26372953 - downstream 19 LOC_Os09g08870 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 4683578 4689688 - downstream 19 LOC_Os07g16400 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9588520 9600363 + downstream 19 LOC_Os05g22718 chloroplast 30S ribosomal protein S8, putative gene chloroplast 30S ribosomal protein S8, putative chr5 12831644 12832054 - downstream 19 LOC_Os06g31040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 18057942 18059264 - downstream 19 LOC_Os01g60389 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 34929362 34932593 + downstream 19 LOC_Os01g30950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16886515 16888661 + downstream 19 LOC_Os07g24990 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 14225790 14228982 + downstream 19 LOC_Os04g17930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9846835 9847913 - downstream 19 LOC_Os09g05120 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr9 2744901 2749554 + downstream 19 LOC_Os12g26100 hypothetical protein gene hypothetical protein chr12 15180096 15181448 - downstream 19 LOC_Os03g10270 conserved hypothetical protein gene conserved hypothetical protein chr3 5231848 5232654 + downstream 19 LOC_Os07g16770 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9836396 9844665 + downstream 19 LOC_Os01g71608 phototropic-responsive NPH3 family protein, putative gene phototropic-responsive NPH3 family protein, putative chr1 41484306 41484971 - downstream 19 LOC_Os01g29890 hypothetical protein gene hypothetical protein chr1 16742155 16742427 - downstream 19 LOC_Os05g27450 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 15903907 15911044 - downstream 19 LOC_Os04g32350 RNA polymerase III RPC4 domain containing protein, expressed gene RNA polymerase III RPC4 domain containing protein, expressed chr4 19226883 19229474 - downstream 19 LOC_Os01g39180 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr1 22041885 22044269 + downstream 19 LOC_Os02g23822 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 13733185 13735522 - downstream 19 LOC_Os08g22030 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 13299597 13304841 + downstream 19 LOC_Os07g16900 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 9932813 9937725 - downstream 19 LOC_Os05g51710 pleckstrin homology domain-containing protein-related taxo, putative, expressed gene pleckstrin homology domain-containing protein-related taxo, putative, expressed chr5 29601385 29604919 - downstream 19 LOC_Os12g35520 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 21566128 21566902 - downstream 19 LOC_Os01g46750 AMP-binding enzyme, putative, expressed gene AMP-binding enzyme, putative, expressed chr1 26627845 26635905 + downstream 19 LOC_Os04g33770 nucleoside-diphosphate-sugar epimerase, putative, expressed gene nucleoside-diphosphate-sugar epimerase, putative, expressed chr4 20274911 20279199 + downstream 19 LOC_Os02g05580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 2708165 2711320 - downstream 19 LOC_Os12g20270 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11825746 11832383 + downstream 19 LOC_Os09g08460 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 4411239 4416051 - downstream 19 LOC_Os10g09490 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5136087 5139995 + downstream 19 LOC_Os01g67364 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr1 39113638 39116489 + downstream 19 LOC_Os05g06160 trehalose phosphatase, putative gene trehalose phosphatase, putative chr5 3091597 3095006 + downstream 19 LOC_Os05g39320 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed gene thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed chr5 23003048 23005377 + downstream 19 LOC_Os06g03170 hypothetical protein gene hypothetical protein chr6 1182443 1191439 - downstream 19 LOC_Os03g49230 acetyltransferase, GNAT family, putative, expressed gene acetyltransferase, GNAT family, putative, expressed chr3 28032400 28035432 - downstream 19 LOC_Os04g17090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 9356827 9357195 - downstream 19 LOC_Os11g32750 hydrolase, NUDIX family, domain containing protein, expressed gene hydrolase, NUDIX family, domain containing protein, expressed chr11 18886527 18891119 + downstream 19 LOC_Os05g22722 chloroplast 50S ribosomal protein L14, putative gene chloroplast 50S ribosomal protein L14, putative chr5 12832194 12832565 - downstream 19 LOC_Os04g06120 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 3177463 3178665 - downstream 19 LOC_Os09g07900 ubiquitin-protein ligase 1, putative, expressed gene ubiquitin-protein ligase 1, putative, expressed chr9 4015486 4035019 + downstream 19 LOC_Os11g11870 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 6584273 6585479 - downstream 19 LOC_Os01g58340 conserved hypothetical protein gene conserved hypothetical protein chr1 33709143 33710167 + downstream 19 LOC_Os09g24414 chloroplast 50S ribosomal protein L22, putative gene chloroplast 50S ribosomal protein L22, putative chr9 14506770 14507219 + downstream 19 LOC_Os01g31300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 17120024 17122046 + downstream 19 LOC_Os04g55310 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 32709191 32710303 + downstream 19 LOC_Os06g42700 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr6 25679947 25681278 - downstream 19 LOC_Os05g09090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 5054005 5056386 - downstream 19 LOC_Os06g01070 conserved hypothetical protein gene conserved hypothetical protein chr6 49099 49641 + downstream 19 LOC_Os01g55430 OsFBT2 - F-box and tubby domain containing protein, expressed gene OsFBT2 - F-box and tubby domain containing protein, expressed chr1 31926090 31928961 - downstream 19 LOC_Os11g44270 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 26287795 26288194 + downstream 19 LOC_Os04g16734 maturase K, putative gene maturase K, putative chr4 9102391 9104019 + downstream 19 LOC_Os01g39220 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr1 22063276 22063695 + downstream 19 LOC_Os07g20940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12110557 12112678 + downstream 19 LOC_Os12g19680 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr12 11466091 11468302 - downstream 19 LOC_Os06g03165 hypothetical protein gene hypothetical protein chr6 1186903 1190012 - downstream 19 LOC_Os02g22730 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 13539575 13540274 - downstream 19 LOC_Os09g40000 AGAP005770-PA, putative, expressed gene AGAP005770-PA, putative, expressed chr9 22933500 22938707 + downstream 19 LOC_Os12g14939 conserved hypothetical protein gene conserved hypothetical protein chr12 8541746 8541999 + downstream 19 LOC_Os04g51420 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 30269344 30270541 - downstream 19 LOC_Os12g23610 ATP synthase, A subunit family protein, putative gene ATP synthase, A subunit family protein, putative chr12 13401406 13405646 - downstream 19 LOC_Os12g21520 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr12 12102048 12103437 + downstream 19 LOC_Os01g60400 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 34932859 34933568 + downstream 19 LOC_Os08g22970 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 13813047 13813928 - downstream 19 LOC_Os12g18830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 10907479 10910121 + downstream 19 LOC_Os05g42070 UDP-glucose flavonoid-O-glucosyltransferase, putative gene UDP-glucose flavonoid-O-glucosyltransferase, putative chr5 24553624 24554785 + downstream 19 LOC_Os05g22430 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 12678076 12679992 + downstream 19 LOC_Os03g30030 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr3 17133040 17134701 - downstream 19 LOC_Os06g39690 SOUL heme-binding protein, putative, expressed gene SOUL heme-binding protein, putative, expressed chr6 23558645 23562077 + downstream 19 LOC_Os04g55350 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 32739153 32741383 + downstream 19 LOC_Os07g16870 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9918226 9920765 - downstream 19 LOC_Os10g22140 conserved hypothetical protein gene conserved hypothetical protein chr10 11362972 11365951 - downstream 19 LOC_Os04g05330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 2644716 2650241 - downstream 19 LOC_Os06g16820 hypothetical protein gene hypothetical protein chr6 9742064 9742879 + downstream 19 LOC_Os11g30030 esterase PIR7A, putative gene esterase PIR7A, putative chr11 17004461 17005124 + downstream 19 LOC_Os03g19350 OsLonP1 - Putative Lon protease homologue, expressed gene OsLonP1 - Putative Lon protease homologue, expressed chr3 10886434 10897707 - downstream 19 LOC_Os12g19710 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11481586 11481879 - downstream 19 LOC_Os03g23250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 13450192 13456855 + downstream 19 LOC_Os12g20470 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11957327 11963091 + downstream 19 LOC_Os08g21680 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr8 12914062 12918006 + downstream 19 LOC_Os09g03180 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 1523380 1528700 + downstream 19 LOC_Os06g03360 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 1281592 1282155 + downstream 19 LOC_Os04g55300 hypothetical protein gene hypothetical protein chr4 32686830 32689281 + downstream 19 LOC_Os12g14900 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 8521834 8523991 - downstream 19 LOC_Os05g20550 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 12060966 12061679 + downstream 19 LOC_Os05g30960 hypothetical protein gene hypothetical protein chr5 17917636 17918103 + downstream 19 LOC_Os10g15330 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 8055214 8056675 + downstream 19 LOC_Os06g26340 CGMC_MAPKCMGC_2.10 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed gene CGMC_MAPKCMGC_2.10 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed chr6 15413830 15422650 - downstream 19 LOC_Os07g20690 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 11955105 11958029 - downstream 19 LOC_Os05g21180 phosphatidic acid phosphatase-related, putative, expressed gene phosphatidic acid phosphatase-related, putative, expressed chr5 12453173 12457726 + downstream 19 LOC_Os12g43160 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 26767810 26769148 + downstream 19 LOC_Os02g53420 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr2 32682736 32687175 - downstream 19 LOC_Os09g06340 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2975750 2976142 + downstream 19 LOC_Os01g18640 aminotransferase, putative, expressed gene aminotransferase, putative, expressed chr1 10495580 10499919 - downstream 19 LOC_Os04g04390 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 2066644 2080265 - downstream 19 LOC_Os06g16830 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 9743691 9744196 + downstream 19 LOC_Os05g36020 hypothetical protein gene hypothetical protein chr5 21270327 21270650 - downstream 19 LOC_Os05g22716 translation initiation factor IF-1, chloroplast, putative gene translation initiation factor IF-1, chloroplast, putative chr5 12831183 12831506 - downstream 19 LOC_Os03g23100 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 13353959 13356956 + downstream 19 LOC_Os10g38189 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr10 20377571 20378519 - downstream 19 LOC_Os07g20880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12074488 12081715 - downstream 19 LOC_Os05g21220 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 12473270 12473982 - downstream 19 LOC_Os10g06260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 3207268 3208368 - downstream 19 LOC_Os03g46440 BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed gene BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed chr3 26257756 26265292 - downstream 19 LOC_Os02g36210 ent-kaurene synthase, chloroplast precursor, putative, expressed gene ent-kaurene synthase, chloroplast precursor, putative, expressed chr2 21835190 21841968 + downstream 19 LOC_Os06g16380 hypothetical protein gene hypothetical protein chr6 9348328 9349580 - downstream 19 LOC_Os11g32830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 18928065 18928391 + downstream 19 LOC_Os05g18330 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10557182 10558450 + downstream 19 LOC_Os09g06170 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 2891827 2893504 - downstream 19 LOC_Os10g21328 DNA-directed RNA polymerase subunit alpha, putative gene DNA-directed RNA polymerase subunit alpha, putative chr10 10810261 10811274 - downstream 19 LOC_Os04g05280 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 2625478 2625918 - downstream 19 LOC_Os09g04680 photosystem II P680 chlorophyll A apoprotein, putative gene photosystem II P680 chlorophyll A apoprotein, putative chr9 2493946 2495364 + downstream 19 LOC_Os08g21470 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr8 12793577 12794409 + downstream 19 LOC_Os05g26460 PROLM11 - Prolamin precursor, expressed gene PROLM11 - Prolamin precursor, expressed chr5 15327376 15328041 + downstream 19 LOC_Os07g20900 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 12094498 12094893 - downstream 19 LOC_Os10g39870 ATG1, putative, expressed gene ATG1, putative, expressed chr10 21259970 21261133 + downstream 19 LOC_Os08g04080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 1977617 1979806 - downstream 19 LOC_Os07g16670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 9782554 9784257 + downstream 19 LOC_Os06g02980 ATP synthase F1, epsilon subunit family protein gene ATP synthase F1, epsilon subunit family protein chr6 1094473 1095463 - downstream 19 LOC_Os04g55290 G10 protein, putative, expressed gene G10 protein, putative, expressed chr4 32683002 32686508 - downstream 19 LOC_Os01g31030 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr1 16973734 16974446 + downstream 19 LOC_Os03g01016 expressed protein gene expressed protein chr3 18876 22618 - downstream 19 LOC_Os01g30990 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 16937443 16938750 - downstream 19 LOC_Os12g20210 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 11780181 11785834 - downstream 19 LOC_Os11g32759 expressed protein gene expressed protein chr11 18888464 18891804 - downstream 19 LOC_Os06g08270 hypothetical protein gene hypothetical protein chr6 4003935 4004619 - downstream 19 LOC_Os11g27090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 15124453 15127426 - downstream 19 LOC_Os03g53419 hypothetical protein gene hypothetical protein chr3 30638408 30639088 - downstream 19 LOC_Os09g17210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 10565285 10566313 + downstream 19 LOC_Os05g25050 hypothetical protein gene hypothetical protein chr5 14438188 14439662 - downstream 19 LOC_Os06g46540 cell division cycle protein 23, putative, expressed gene cell division cycle protein 23, putative, expressed chr6 28255525 28259342 + downstream 19 LOC_Os08g16950 hypothetical protein gene hypothetical protein chr8 10379107 10379741 - downstream 19 LOC_Os02g46420 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr2 28272447 28274172 - downstream 19 LOC_Os10g21332 chloroplast 30S ribosomal protein S11, putative gene chloroplast 30S ribosomal protein S11, putative chr10 10811338 10811769 - downstream 19 LOC_Os12g14440 Jacalin-like lectin domain containing protein, putative, expressed gene Jacalin-like lectin domain containing protein, putative, expressed chr12 8236834 8238558 + downstream 19 LOC_Os12g29720 hypothetical protein gene hypothetical protein chr12 17716855 17718664 + downstream 19 LOC_Os07g20660 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 11932690 11935690 + downstream 19 LOC_Os12g10100 ligA, putative gene ligA, putative chr12 5346839 5347288 + downstream