9 LOC_Os12g12934 peptide transporter PTR3-A, putative, expressed gene peptide transporter PTR3-A, putative, expressed chr12 7163195 7168416 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os10g03530 CAF1 family ribonuclease containing protein, putative gene CAF1 family ribonuclease containing protein, putative chr10 1524489 1525271 - CDS,downstream 9 LOC_Os06g45410 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr6 27455913 27458565 + CDS 9 LOC_Os08g27720 pirin, putative, expressed gene pirin, putative, expressed chr8 16889633 16893716 + CDS 9 LOC_Os04g45330 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr4 26612527 26615130 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g64620 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr1 37504112 37505046 + CDS,three_prime_UTR 9 LOC_Os04g10000 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr4 5375536 5377006 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os07g36740 CSLF4 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase gene CSLF4 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase chr7 22005069 22011120 - CDS,promoter,downstream 9 LOC_Os10g28970 BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed gene BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed chr10 15031030 15032858 + CDS,three_prime_UTR,promoter 9 LOC_Os09g19500 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 11663441 11666859 + CDS,promoter 9 LOC_Os11g47950 cyclin, putative gene cyclin, putative chr11 28398197 28400371 - CDS,promoter,downstream 9 LOC_Os09g17970 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 10991178 10997260 - CDS 9 LOC_Os11g03770 hypothetical protein gene hypothetical protein chr11 1480581 1481553 - CDS 9 LOC_Os01g18900 stigma specific peroxidase precursor, putative gene stigma specific peroxidase precursor, putative chr1 10686169 10686465 - CDS,downstream 9 LOC_Os01g03230 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 1308843 1310568 - CDS,promoter 9 LOC_Os03g10730 hypothetical protein gene hypothetical protein chr3 5478286 5479808 + CDS,promoter,downstream 9 LOC_Os05g05100 expressed protein gene expressed protein chr5 2477879 2478451 - five_prime_UTR,downstream 9 LOC_Os05g32070 LRP1, putative, expressed gene LRP1, putative, expressed chr5 18631300 18632636 - three_prime_UTR,promoter,downstream 9 LOC_Os05g37020 hypothetical protein gene hypothetical protein chr5 21571833 21573271 - CDS,promoter 9 LOC_Os10g10420 OsFBX378 - F-box domain containing protein gene OsFBX378 - F-box domain containing protein chr10 5737379 5738725 - CDS,downstream 9 LOC_Os10g04850 OsFBO5 - F-box and other domain containing protein gene OsFBO5 - F-box and other domain containing protein chr10 2349381 2353482 - CDS,downstream 9 LOC_Os11g38130 OsFBDUF57 - F-box and DUF domain containing protein, expressed gene OsFBDUF57 - F-box and DUF domain containing protein, expressed chr11 22144741 22146393 - CDS,downstream 9 LOC_Os12g36040 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr12 22055981 22058413 + five_prime_UTR,CDS,promoter 9 LOC_Os06g21920 inorganic phosphate transporter 1-9, putative, expressed gene inorganic phosphate transporter 1-9, putative, expressed chr6 12679639 12680852 + five_prime_UTR,promoter 9 LOC_Os03g47370 LTPL95 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL95 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr3 26782957 26784313 + CDS,promoter 9 LOC_Os04g06690 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 3513817 3518517 + CDS,downstream 9 LOC_Os06g46160 expressed protein gene expressed protein chr6 27974948 27978363 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os11g26780 dehydrin, putative, expressed gene dehydrin, putative, expressed chr11 14872348 14873477 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g13790 POT family protein gene POT family protein chr12 7792875 7796966 + CDS 9 LOC_Os10g01920 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr10 582000 583653 + five_prime_UTR,CDS 9 LOC_Os11g32080 conserved hypothetical protein gene conserved hypothetical protein chr11 18434804 18435303 - CDS,promoter,downstream 9 LOC_Os11g40840 receptor-like protein kinase 2 precursor, putative, expressed gene receptor-like protein kinase 2 precursor, putative, expressed chr11 23970868 23972166 - five_prime_UTR,CDS,downstream 9 LOC_Os11g36270 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 20884607 20886707 - CDS,downstream 9 LOC_Os07g06286 peroxidase precursor, putative gene peroxidase precursor, putative chr7 3057437 3058408 + CDS,promoter,downstream 9 LOC_Os06g07640 myb-like DNA-binding domain, SHAQKYF class family protein gene myb-like DNA-binding domain, SHAQKYF class family protein chr6 3695118 3696877 - CDS 9 LOC_Os04g47900 ATTIM23-2, putative, expressed gene ATTIM23-2, putative, expressed chr4 28294355 28295209 - three_prime_UTR,promoter 9 LOC_Os11g35980 leucine rich repeat protein, putative, expressed gene leucine rich repeat protein, putative, expressed chr11 20679639 20682744 + five_prime_UTR,promoter 9 LOC_Os06g39120 expressed protein gene expressed protein chr6 23231526 23232881 + CDS,three_prime_UTR 9 LOC_Os01g58650 LTPL35 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL35 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr1 33905326 33908548 + CDS,promoter 9 LOC_Os01g08630 hypothetical protein gene hypothetical protein chr1 4296867 4301381 - CDS,promoter 9 LOC_Os01g01360 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr1 177310 179812 + CDS,three_prime_UTR 9 LOC_Os10g24400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 12433820 12440320 + CDS 9 LOC_Os01g28500 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr1 15957709 15958474 - five_prime_UTR,CDS,downstream 9 LOC_Os03g24100 expressed protein gene expressed protein chr3 13677418 13678572 - CDS,promoter 9 LOC_Os05g22800 pectate lyase precursor, putative, expressed gene pectate lyase precursor, putative, expressed chr5 12876015 12881290 - CDS 9 LOC_Os01g42610 terpene synthase, putative gene terpene synthase, putative chr1 24233585 24237945 + CDS 9 LOC_Os12g38230 expressed protein gene expressed protein chr12 23451268 23452144 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os03g06705 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr3 3404787 3406195 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g07050 POEI42 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI42 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr1 3316554 3317111 - CDS,promoter,downstream 9 LOC_Os06g34870 Zinc finger, C3HC4 type domain containing protein gene Zinc finger, C3HC4 type domain containing protein chr6 20275504 20280210 - CDS,downstream 9 LOC_Os03g37930 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr3 21058923 21063478 - CDS,downstream 9 LOC_Os02g36070 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 21684509 21686317 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g17400 leucine rich repeat protein, putative gene leucine rich repeat protein, putative chr2 10010586 10013468 - CDS,downstream 9 LOC_Os03g39629 hypothetical protein gene hypothetical protein chr3 22009587 22010053 - CDS,promoter,downstream 9 LOC_Os04g45630 conserved hypothetical protein gene conserved hypothetical protein chr4 26803217 26804209 - CDS,promoter,downstream 9 LOC_Os06g39110 expressed protein gene expressed protein chr6 23226138 23227395 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g42259 hypervariable Bacillus group-specific protein, putative, expressed gene hypervariable Bacillus group-specific protein, putative, expressed chr3 23510786 23511753 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os07g41540 sulfotransferase domain containing protein gene sulfotransferase domain containing protein chr7 24900928 24902268 - CDS,promoter 9 LOC_Os03g43080 hypothetical protein gene hypothetical protein chr3 24033812 24034482 + CDS,promoter 9 LOC_Os04g26980 terpene synthase, putative gene terpene synthase, putative chr4 15781750 15785745 - CDS 9 LOC_Os06g11710 cytokinin-O-glucosyltransferase 2, putative gene cytokinin-O-glucosyltransferase 2, putative chr6 6201141 6201791 + CDS,promoter,downstream 9 LOC_Os09g20684 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed gene SMP-30/Gluconolaconase/LRE-like region containing protein, expressed chr9 12453364 12459995 + five_prime_UTR,CDS,promoter 9 LOC_Os08g01140 cytochrome b561, putative, expressed gene cytochrome b561, putative, expressed chr8 94765 96042 - CDS,three_prime_UTR 9 LOC_Os01g55060 hypothetical protein gene hypothetical protein chr1 31658477 31658746 - CDS,promoter,downstream 9 LOC_Os11g46130 stripe rust resistance protein Yr10, putative gene stripe rust resistance protein Yr10, putative chr11 27448450 27449403 + CDS,promoter 9 LOC_Os12g34950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 21237995 21244677 - CDS,promoter 9 LOC_Os12g27930 expressed protein gene expressed protein chr12 16460349 16461244 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g09130 hypothetical protein gene hypothetical protein chr12 4774852 4776983 - CDS,downstream 9 LOC_Os02g21090 CPuORF33 - conserved peptide uORF-containing transcript, expressed gene CPuORF33 - conserved peptide uORF-containing transcript, expressed chr2 12503298 12507105 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os10g37034 cytochrome P450, putative gene cytochrome P450, putative chr10 19757759 19761223 + CDS 9 LOC_Os11g08280 DEFL33 - Defensin and Defensin-like DEFL family gene DEFL33 - Defensin and Defensin-like DEFL family chr11 4338379 4338717 + CDS,downstream 9 LOC_Os07g38690 ubiquitin-like protein SMT3, putative, expressed gene ubiquitin-like protein SMT3, putative, expressed chr7 23226391 23226986 + five_prime_UTR,promoter,downstream 9 LOC_Os10g42030 expressed protein gene expressed protein chr10 22523552 22529800 + CDS,downstream 9 LOC_Os07g01110 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr7 57610 59650 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g10130 OsWAK112d - OsWAK receptor-like protein kinase, expressed gene OsWAK112d - OsWAK receptor-like protein kinase, expressed chr10 5554559 5561117 - five_prime_UTR,CDS,downstream 9 LOC_Os02g14910 bZIP transcription factor family protein, putative, expressed gene bZIP transcription factor family protein, putative, expressed chr2 8323890 8325790 + five_prime_UTR,CDS,promoter 9 LOC_Os03g14270 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr3 7766000 7767639 - CDS,downstream 9 LOC_Os08g04580 csAtPR5, putative, expressed gene csAtPR5, putative, expressed chr8 2282686 2285212 - CDS,promoter 9 LOC_Os07g22770 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr7 12845940 12847593 - three_prime_UTR 9 LOC_Os07g06540 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr7 3179347 3179925 + CDS,promoter,downstream 9 LOC_Os08g02110 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr8 696180 697615 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os08g32750 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed gene bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed chr8 20280332 20282774 + five_prime_UTR,CDS,promoter 9 LOC_Os02g29020 Cupin domain containing protein gene Cupin domain containing protein chr2 17169352 17170023 + CDS,promoter 9 LOC_Os02g40260 uncharacterized protein At4g06744 precursor, putative, expressed gene uncharacterized protein At4g06744 precursor, putative, expressed chr2 24366936 24368627 + CDS,three_prime_UTR,downstream 9 LOC_Os08g02300 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr8 855111 857609 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g47390 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr11 27985223 27987942 - CDS 9 LOC_Os07g01590 hypothetical protein gene hypothetical protein chr7 366516 367830 - CDS,promoter,downstream 9 LOC_Os07g04330 expressed protein gene expressed protein chr7 1911081 1913268 + CDS,three_prime_UTR,promoter 9 LOC_Os02g39260 cyclin, putative, expressed gene cyclin, putative, expressed chr2 23705021 23706577 + CDS,three_prime_UTR,downstream 9 LOC_Os10g33370 3-ketoacyl-CoA synthase precursor, putative, expressed gene 3-ketoacyl-CoA synthase precursor, putative, expressed chr10 17492940 17500347 + CDS,three_prime_UTR 9 LOC_Os01g20980 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr1 11714139 11716758 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g24820 OsFBX127 - F-box domain containing protein, expressed gene OsFBX127 - F-box domain containing protein, expressed chr4 14255173 14256897 - CDS,downstream 9 LOC_Os01g60600 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr1 35031468 35034278 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g51680 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed gene uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed chr2 31657211 31659949 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g43580 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr4 25604877 25606431 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g11350 embryogenesis transmembrane protein, putative, expressed gene embryogenesis transmembrane protein, putative, expressed chr11 6292301 6296627 - CDS,downstream 9 LOC_Os07g11690 hypothetical protein gene hypothetical protein chr7 6467247 6467731 - CDS,promoter 9 LOC_Os03g37290 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 20664519 20669333 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g08022 fructose-bisphospate aldolase isozyme, putative, expressed gene fructose-bisphospate aldolase isozyme, putative, expressed chr10 4360120 4362047 - five_prime_UTR,CDS,downstream 9 LOC_Os03g50644 conserved hypothetical protein gene conserved hypothetical protein chr3 28909753 28910758 + CDS,downstream 9 LOC_Os03g06960 vesicle-associated membrane protein, putative, expressed gene vesicle-associated membrane protein, putative, expressed chr3 3550771 3553411 + CDS 9 LOC_Os01g55200 potassium channel KAT1, putative, expressed gene potassium channel KAT1, putative, expressed chr1 31760179 31762843 + CDS 9 LOC_Os03g47310 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 26754275 26758768 + CDS,promoter 9 LOC_Os01g13870 expressed protein gene expressed protein chr1 7775045 7776328 + CDS,promoter,downstream 9 LOC_Os03g22750 OsFBX83 - F-box domain containing protein gene OsFBX83 - F-box domain containing protein chr3 13139406 13140666 + CDS,promoter,downstream 9 LOC_Os08g04210 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr8 2053191 2055028 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os12g05510 conserved hypothetical protein gene conserved hypothetical protein chr12 2520695 2522452 - CDS,promoter,downstream 9 LOC_Os07g05510 expressed protein gene expressed protein chr7 2568104 2569642 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g10590 osFTL8 FT-Like8 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL8 FT-Like8 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr1 5651593 5654352 + CDS,promoter 9 LOC_Os03g24640 terpene synthase, putative gene terpene synthase, putative chr3 14031205 14036019 + CDS,promoter 9 LOC_Os07g09110 OsFBX219 - F-box domain containing protein, expressed gene OsFBX219 - F-box domain containing protein, expressed chr7 4757159 4759321 - CDS,three_prime_UTR,promoter 9 LOC_Os03g43564 hypothetical protein gene hypothetical protein chr3 24333466 24335643 - CDS,promoter 9 LOC_Os11g29740 expressed protein gene expressed protein chr11 16785922 16786440 - CDS,promoter,downstream 9 LOC_Os10g21090 ATP binding protein, putative, expressed gene ATP binding protein, putative, expressed chr10 10628067 10630782 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g08700 expressed protein gene expressed protein chr12 4411899 4414891 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g25250 OsFBX90 - F-box domain containing protein gene OsFBX90 - F-box domain containing protein chr3 14421671 14423020 - CDS,promoter 9 LOC_Os07g43140 VQ domain containing protein, putative gene VQ domain containing protein, putative chr7 25846732 25847490 - CDS,promoter 9 LOC_Os08g06120 B3 DNA binding domain containing protein gene B3 DNA binding domain containing protein chr8 3376472 3377335 + CDS,promoter,downstream 9 LOC_Os01g03640 multicopper oxidase domain containing protein, expressed gene multicopper oxidase domain containing protein, expressed chr1 1496240 1499609 - CDS,three_prime_UTR,promoter 9 LOC_Os10g20260 CSLF7 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed gene CSLF7 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed chr10 10109243 10116460 - five_prime_UTR,CDS,downstream 9 LOC_Os07g17490 hypothetical protein gene hypothetical protein chr7 10325863 10328180 - CDS,downstream 9 LOC_Os01g03530 multicopper oxidase domain containing protein, expressed gene multicopper oxidase domain containing protein, expressed chr1 1432033 1435811 + five_prime_UTR,CDS 9 LOC_Os10g04000 STE_MEKK_ste11_MAP3K.22 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast gene STE_MEKK_ste11_MAP3K.22 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast chr10 1827774 1829354 - CDS,downstream 9 LOC_Os04g57080 jasmonate O-methyltransferase, putative gene jasmonate O-methyltransferase, putative chr4 33832316 33834446 + CDS,promoter,downstream 9 LOC_Os04g33570 RCN4 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene RCN4 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr4 20147073 20149558 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g19330 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 10933871 10934968 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os03g32050 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 18324012 18331304 - five_prime_UTR,CDS,downstream 9 LOC_Os01g69070 auxin efflux carrier component, putative, expressed gene auxin efflux carrier component, putative, expressed chr1 40135182 40141721 - five_prime_UTR,CDS,downstream 9 LOC_Os09g30990 hypothetical protein gene hypothetical protein chr9 18659141 18659780 - CDS,downstream 9 LOC_Os08g42170 zinc transporter 2 precursor, putative, expressed gene zinc transporter 2 precursor, putative, expressed chr8 26644120 26644540 + CDS,three_prime_UTR,downstream 9 LOC_Os08g12980 conserved hypothetical protein gene conserved hypothetical protein chr8 7700470 7702431 - CDS,downstream 9 LOC_Os12g34200 OsFBX450 - F-box domain containing protein gene OsFBX450 - F-box domain containing protein chr12 20695288 20698893 + CDS,promoter 9 LOC_Os10g17890 OsWAK113 - OsWAK receptor-like protein OsWAK-RLP gene OsWAK113 - OsWAK receptor-like protein OsWAK-RLP chr10 8970821 8971732 + CDS,downstream 9 LOC_Os12g36000 conserved hypothetical protein gene conserved hypothetical protein chr12 21976965 21978745 + CDS 9 LOC_Os12g25360 hypothetical protein gene hypothetical protein chr12 14629585 14631120 + CDS,downstream 9 LOC_Os01g11740 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 6351582 6357359 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os03g64170 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr3 36248885 36252369 - five_prime_UTR,CDS,downstream 9 LOC_Os12g31610 lectin-like protein kinase, putative gene lectin-like protein kinase, putative chr12 19007058 19010389 - CDS,downstream 9 LOC_Os05g11250 lachrymatory factor synthase, putative, expressed gene lachrymatory factor synthase, putative, expressed chr5 6348808 6349882 + CDS,three_prime_UTR,downstream 9 LOC_Os01g01430 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr1 215126 216664 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g37660 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr12 23085261 23089161 - CDS,three_prime_UTR 9 LOC_Os07g29830 ankyrin repeat domain containing protein gene ankyrin repeat domain containing protein chr7 17537884 17538377 - CDS,downstream 9 LOC_Os04g45590 glyoxalase family protein, putative, expressed gene glyoxalase family protein, putative, expressed chr4 26790471 26791514 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g62490 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr1 36176246 36179084 - CDS,three_prime_UTR,downstream 9 LOC_Os07g05024 expressed protein gene expressed protein chr7 2214530 2216181 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g48190 hypothetical protein gene hypothetical protein chr4 28515402 28517636 - CDS,promoter,downstream 9 LOC_Os06g37680 expressed protein gene expressed protein chr6 22326747 22327918 - CDS 9 LOC_Os01g21710 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr1 12183831 12185801 + CDS 9 LOC_Os04g57840 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr4 34255164 34258970 - three_prime_UTR,promoter 9 LOC_Os02g30240 expressed protein gene expressed protein chr2 17975634 17976666 - five_prime_UTR,downstream 9 LOC_Os03g44690 hypothetical protein gene hypothetical protein chr3 25184867 25185833 + CDS 9 LOC_Os06g19010 cadmium tolerance factor, putative, expressed gene cadmium tolerance factor, putative, expressed chr6 10812017 10815112 - five_prime_UTR,CDS,downstream 9 LOC_Os08g41030 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr8 25947544 25948452 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g03884 homeobox protein knotted-1-like 6, putative, expressed gene homeobox protein knotted-1-like 6, putative, expressed chr5 1724437 1730928 - five_prime_UTR,CDS,downstream 9 LOC_Os07g34240 gibberellin receptor GID1L2, putative gene gibberellin receptor GID1L2, putative chr7 20484034 20485353 + CDS,promoter,downstream 9 LOC_Os06g36210 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr6 21207195 21213384 + CDS 9 LOC_Os11g05200 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr11 2293555 2294286 + CDS,promoter 9 LOC_Os04g43324 G-patch domain containing protein, putative gene G-patch domain containing protein, putative chr4 25441974 25446301 + CDS,downstream 9 LOC_Os06g14540 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr6 8177989 8183625 - CDS 9 LOC_Os06g46860 hypothetical protein gene hypothetical protein chr6 28439984 28443176 - CDS,downstream 9 LOC_Os09g20150 C1-like domain containing protein gene C1-like domain containing protein chr9 12066465 12070747 + CDS,promoter,downstream 9 LOC_Os03g48760 Cupin domain containing protein gene Cupin domain containing protein chr3 27776945 27777634 - CDS,downstream 9 LOC_Os02g40070 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed gene AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed chr2 24255802 24260428 + three_prime_UTR,promoter 9 LOC_Os01g46984 expressed protein gene expressed protein chr1 26821159 26822807 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g41800 dihydroflavonol-4-reductase, putative, expressed gene dihydroflavonol-4-reductase, putative, expressed chr6 25065393 25070031 - CDS 9 LOC_Os03g41010 hypothetical protein gene hypothetical protein chr3 22795693 22796354 - CDS,promoter,downstream 9 LOC_Os04g31670 conserved hypothetical protein gene conserved hypothetical protein chr4 18803883 18804775 + CDS,promoter,downstream 9 LOC_Os01g67690 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 39335768 39340114 - CDS,downstream 9 LOC_Os09g34250 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr9 20221693 20223633 + five_prime_UTR,CDS,promoter 9 LOC_Os03g46046 hypothetical protein gene hypothetical protein chr3 26025639 26026219 + CDS 9 LOC_Os03g61430 uncharacterized Cys-rich domain containing protein, putative gene uncharacterized Cys-rich domain containing protein, putative chr3 34849983 34850754 - CDS,downstream 9 LOC_Os03g19990 WD40-like Beta Propeller Repeat family protein, expressed gene WD40-like Beta Propeller Repeat family protein, expressed chr3 11265539 11268816 + CDS 9 LOC_Os07g15160 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 8701193 8705005 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os05g31720 stromal membrane-associated protein, putative, expressed gene stromal membrane-associated protein, putative, expressed chr5 18406449 18410135 + CDS,three_prime_UTR,promoter 9 LOC_Os03g01260 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 178154 179206 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g13400 ZOS3-06 - C2H2 zinc finger protein, expressed gene ZOS3-06 - C2H2 zinc finger protein, expressed chr3 7236160 7240443 - five_prime_UTR,downstream 9 LOC_Os08g32330 expressed protein gene expressed protein chr8 20018404 20020387 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g42240 expressed protein gene expressed protein chr4 24796912 24797897 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os05g44200 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr5 25620236 25622478 - CDS,downstream 9 LOC_Os03g14654 LTPL108 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL108 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 7964102 7965039 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os09g36260 hypothetical protein gene hypothetical protein chr9 20920528 20921690 - CDS,promoter 9 LOC_Os10g10540 cysteine-rich repeat secretory protein precursor, putative, expressed gene cysteine-rich repeat secretory protein precursor, putative, expressed chr10 5837763 5844685 + CDS,promoter 9 LOC_Os01g24550 fruit bromelain precursor, putative, expressed gene fruit bromelain precursor, putative, expressed chr1 13836880 13838313 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g06720 disease resistance protein SlVe2 precursor, putative gene disease resistance protein SlVe2 precursor, putative chr1 3175544 3178602 + CDS 9 LOC_Os11g08870 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 4694022 4699515 - CDS,downstream 9 LOC_Os04g29090 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr4 17086877 17091173 - CDS,promoter 9 LOC_Os09g38360 hypothetical protein gene hypothetical protein chr9 22089798 22090877 + CDS,promoter,downstream 9 LOC_Os03g16950 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr3 9420625 9421861 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g40480 LTPL143 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL143 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21603118 21603853 - five_prime_UTR,promoter,downstream 9 LOC_Os01g17990 conserved hypothetical protein gene conserved hypothetical protein chr1 10060418 10064078 + CDS,downstream 9 LOC_Os06g19300 cadmium tolerance factor, putative gene cadmium tolerance factor, putative chr6 10972967 10976255 + CDS,promoter 9 LOC_Os07g29310 OsSAUR30 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR30 - Auxin-responsive SAUR gene family member, expressed chr7 17185680 17186647 + three_prime_UTR 9 LOC_Os07g10330 conserved hypothetical protein gene conserved hypothetical protein chr7 5533727 5534362 - CDS,promoter,downstream 9 LOC_Os11g30810 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr11 17477402 17479248 + CDS,three_prime_UTR 9 LOC_Os12g43390 thaumatin, putative gene thaumatin, putative chr12 26888574 26889098 - CDS,promoter,downstream 9 LOC_Os01g65740 plant-specific domain TIGR01615 family protein gene plant-specific domain TIGR01615 family protein chr1 38163494 38166102 + CDS,promoter 9 LOC_Os02g51440 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr2 31509432 31511915 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g54690 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr2 33485746 33487000 + CDS,promoter 9 LOC_Os12g24140 cyclin-dependent kinase G-2, putative gene cyclin-dependent kinase G-2, putative chr12 13736781 13737740 + CDS,promoter 9 LOC_Os07g29940 conserved hypothetical protein gene conserved hypothetical protein chr7 17626239 17627720 + CDS,downstream 9 LOC_Os01g56030 EF hand family protein, putative, expressed gene EF hand family protein, putative, expressed chr1 32257870 32258982 - three_prime_UTR,promoter,downstream 9 LOC_Os01g68300 expressed protein gene expressed protein chr1 39681791 39682399 - three_prime_UTR,promoter 9 LOC_Os11g08240 DEFL29 - Defensin and Defensin-like DEFL family gene DEFL29 - Defensin and Defensin-like DEFL family chr11 4321940 4322266 + CDS,promoter,downstream 9 LOC_Os03g50180 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 28610925 28617103 + CDS,promoter 9 LOC_Os07g11440 chalcone synthase, putative gene chalcone synthase, putative chr7 6293616 6295308 - CDS,promoter,downstream 9 LOC_Os11g33430 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr11 19318118 19320731 + CDS,promoter,downstream 9 LOC_Os01g33920 hypothetical protein gene hypothetical protein chr1 18657357 18657647 - CDS,downstream 9 LOC_Os11g06570 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 3155631 3171408 + CDS,downstream 9 LOC_Os07g18570 hypothetical protein gene hypothetical protein chr7 10983163 10984530 - CDS,promoter 9 LOC_Os12g38570 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr12 23654038 23657560 - CDS,promoter 9 LOC_Os10g01240 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr10 158717 159240 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g16470 phosphatidylinositol kinase, putative, expressed gene phosphatidylinositol kinase, putative, expressed chr1 9348256 9350312 + three_prime_UTR,promoter 9 LOC_Os04g38760 hypothetical protein gene hypothetical protein chr4 22846947 22848844 - CDS,downstream 9 LOC_Os10g01930 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr10 590160 591679 + five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g42569 expressed protein gene expressed protein chr3 23692532 23702980 + five_prime_UTR,promoter 9 LOC_Os12g43410 thaumatin, putative gene thaumatin, putative chr12 26898672 26899691 - CDS,promoter,downstream 9 LOC_Os07g42290 expressed protein gene expressed protein chr7 25308040 25310643 + five_prime_UTR,CDS,promoter 9 LOC_Os04g48280 hypothetical protein gene hypothetical protein chr4 28569458 28571615 - CDS,downstream 9 LOC_Os11g45380 zinc finger family protein, putative gene zinc finger family protein, putative chr11 26978210 26981179 - CDS,promoter 9 LOC_Os03g06640 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 3346624 3350414 + CDS 9 LOC_Os10g42900 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr10 23057470 23060637 + five_prime_UTR,promoter 9 LOC_Os06g10250 hypothetical protein gene hypothetical protein chr6 5257956 5260613 + CDS,promoter 9 LOC_Os01g62170 hypothetical protein gene hypothetical protein chr1 35992938 35994890 + CDS,downstream 9 LOC_Os09g07154 hypothetical protein gene hypothetical protein chr9 3492993 3495469 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os03g22240 hypothetical protein gene hypothetical protein chr3 12755892 12756215 - CDS,promoter,downstream 9 LOC_Os01g58100 polyphenol oxidase, putative gene polyphenol oxidase, putative chr1 33600286 33604216 - CDS,promoter,downstream 9 LOC_Os01g31850 expressed protein gene expressed protein chr1 17443478 17444209 + five_prime_UTR,CDS 9 LOC_Os01g19370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 10959991 10961372 - CDS,promoter 9 LOC_Os10g09700 OsWAK110 - OsWAK receptor-like protein kinase gene OsWAK110 - OsWAK receptor-like protein kinase chr10 5258692 5261784 + CDS,promoter 9 LOC_Os04g42220 GPI-anchored protein, putative, expressed gene GPI-anchored protein, putative, expressed chr4 24790833 24792066 + three_prime_UTR,downstream 9 LOC_Os05g29790 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr5 17176649 17179988 + CDS,promoter 9 LOC_Os01g01520 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr1 269145 274084 - five_prime_UTR,downstream 9 LOC_Os11g02330 LTPL22 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL22 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 679037 679912 + three_prime_UTR 9 LOC_Os02g58720 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr2 35869292 35871128 + five_prime_UTR,three_prime_UTR,CDS,promoter,downstream 9 LOC_Os05g16140 hypothetical protein gene hypothetical protein chr5 9128070 9129650 - CDS 9 LOC_Os08g41800 regulatory protein, putative, expressed gene regulatory protein, putative, expressed chr8 26395610 26398388 + CDS,promoter 9 LOC_Os08g07740 histone-like transcription factor and archaeal histone, putative, expressed gene histone-like transcription factor and archaeal histone, putative, expressed chr8 4332720 4334437 - five_prime_UTR 9 LOC_Os06g02900 aspartic proteinase nepenthesin-2 precursor, putative, expressed gene aspartic proteinase nepenthesin-2 precursor, putative, expressed chr6 1062523 1065533 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g34550 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 19055183 19056938 + CDS,promoter,downstream 9 LOC_Os11g13750 expressed protein gene expressed protein chr11 7563716 7564551 - three_prime_UTR,downstream 9 LOC_Os03g21970 basic helix-loop-helix domain containing protein, expressed gene basic helix-loop-helix domain containing protein, expressed chr3 12586262 12588565 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g10210 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr3 5179657 5181187 - three_prime_UTR,promoter,downstream 9 LOC_Os08g06370 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr8 3529970 3534440 + CDS,three_prime_UTR,downstream 9 LOC_Os01g50480 SAM dependent carboxyl methyltransferase, putative gene SAM dependent carboxyl methyltransferase, putative chr1 28983498 28984971 - CDS,downstream 9 LOC_Os02g07810 inactive receptor kinase At2g26730 precursor, putative, expressed gene inactive receptor kinase At2g26730 precursor, putative, expressed chr2 4086434 4089162 + CDS,downstream 9 LOC_Os12g12000 RALFL46 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL46 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr12 6575194 6575919 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os02g29720 cytochrome P450, putative gene cytochrome P450, putative chr2 17670489 17672354 - CDS 9 LOC_Os05g35830 expressed protein gene expressed protein chr5 21196252 21197369 + five_prime_UTR,CDS,promoter 9 LOC_Os01g32389 unknown gene unknown chr1 17769544 17770822 + CDS,downstream 9 LOC_Os04g59370 thaumatin, putative, expressed gene thaumatin, putative, expressed chr4 35102662 35104037 + five_prime_UTR,CDS,promoter 9 LOC_Os09g08520 hypothetical protein gene hypothetical protein chr9 4442720 4443847 - CDS,promoter 9 LOC_Os09g38930 expressed protein gene expressed protein chr9 22354475 22356685 - CDS,promoter,downstream 9 LOC_Os05g08830 expressed protein gene expressed protein chr5 4875785 4876359 + five_prime_UTR,promoter 9 LOC_Os10g09820 no apical meristem protein, putative gene no apical meristem protein, putative chr10 5331531 5335172 - CDS 9 LOC_Os11g12430 hypothetical protein gene hypothetical protein chr11 6938991 6942906 + CDS 9 LOC_Os04g50030 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr4 29646107 29647877 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g05640 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr11 2556720 2559538 + three_prime_UTR 9 LOC_Os12g39240 cytochrome P450, putative gene cytochrome P450, putative chr12 24121390 24123404 - CDS,downstream 9 LOC_Os09g11730 hypothetical protein gene hypothetical protein chr9 6541918 6548115 - CDS 9 LOC_Os04g39230 expressed protein gene expressed protein chr4 23144719 23145901 + five_prime_UTR,CDS,promoter 9 LOC_Os04g32989 unknown gene unknown chr4 19773543 19773979 + CDS,promoter 9 LOC_Os05g16160 malonyl-CoA isoflavone 7-O-glucoside-6-O-malonyltransferase, putative gene malonyl-CoA isoflavone 7-O-glucoside-6-O-malonyltransferase, putative chr5 9137845 9138393 + CDS,promoter,downstream 9 LOC_Os06g26210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 15328732 15331084 - CDS 9 LOC_Os07g08570 OsFBX218 - F-box domain containing protein gene OsFBX218 - F-box domain containing protein chr7 4424619 4425793 - CDS,promoter,downstream 9 LOC_Os05g31670 AWPM-19-like membrane family protein, putative, expressed gene AWPM-19-like membrane family protein, putative, expressed chr5 18368810 18369779 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g41070 NAD dependent epimerase/dehydratase family protein, putative, expressed gene NAD dependent epimerase/dehydratase family protein, putative, expressed chr7 24566138 24569324 - five_prime_UTR,CDS,downstream 9 LOC_Os03g53220 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative gene U5 small nuclear ribonucleoprotein 200 kDa helicase, putative chr3 30515962 30523987 + CDS 9 LOC_Os03g01700 expressed protein gene expressed protein chr3 429476 431876 - five_prime_UTR,CDS,downstream 9 LOC_Os04g25454 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 14737822 14750190 - CDS,downstream 9 LOC_Os04g19960 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 11121245 11122203 + three_prime_UTR,promoter 9 LOC_Os03g19630 myb-like DNA-binding domain containing protein gene myb-like DNA-binding domain containing protein chr3 11038512 11039081 - CDS,promoter 9 LOC_Os01g73770 dehydration-responsive element-binding protein, putative, expressed gene dehydration-responsive element-binding protein, putative, expressed chr1 42726382 42727319 + CDS,three_prime_UTR 9 LOC_Os12g43340 actin-depolymerizing factor, putative, expressed gene actin-depolymerizing factor, putative, expressed chr12 26855162 26856653 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g43840 possible lysine decarboxylase domain containing protein, expressed gene possible lysine decarboxylase domain containing protein, expressed chr4 25774274 25778379 + five_prime_UTR,CDS,promoter 9 LOC_Os03g55034 expressed protein gene expressed protein chr3 31290129 31290819 - three_prime_UTR,promoter 9 LOC_Os10g04030 conserved hypothetical protein gene conserved hypothetical protein chr10 1840729 1841823 + CDS,promoter,downstream 9 LOC_Os08g39390 ZOS8-10 - C2H2 zinc finger protein, expressed gene ZOS8-10 - C2H2 zinc finger protein, expressed chr8 24902585 24906253 + CDS,three_prime_UTR,downstream 9 LOC_Os06g34270 hypothetical protein gene hypothetical protein chr6 19947202 19949049 + CDS,downstream 9 LOC_Os12g31560 protein kinase, putative gene protein kinase, putative chr12 18956069 18958083 + CDS,promoter 9 LOC_Os07g23410 fatty acid desaturase, putative, expressed gene fatty acid desaturase, putative, expressed chr7 13200067 13205934 - CDS,three_prime_UTR 9 LOC_Os06g43320 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 26033860 26037359 + CDS 9 LOC_Os11g42680 NBS-LRR type disease resistance protein, putative gene NBS-LRR type disease resistance protein, putative chr11 25242719 25243432 + CDS,downstream 9 LOC_Os03g06040 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 3020242 3021563 + CDS,three_prime_UTR,promoter 9 LOC_Os12g42610 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr12 26444027 26453782 + five_prime_UTR,promoter 9 LOC_Os11g08445 DnaK family protein, putative gene DnaK family protein, putative chr11 4444544 4448126 + CDS,promoter,downstream 9 LOC_Os11g06630 ribosome inactivating protein, putative gene ribosome inactivating protein, putative chr11 3207208 3208083 - CDS,promoter 9 LOC_Os03g19120 MYB family transcription factor, putative gene MYB family transcription factor, putative chr3 10706116 10711931 - CDS,downstream 9 LOC_Os06g10820 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr6 5641246 5641881 + CDS,downstream 9 LOC_Os07g41910 DC1 domain-containing protein, putative gene DC1 domain-containing protein, putative chr7 25105001 25105504 + CDS,promoter,downstream 9 LOC_Os10g37950 conserved hypothetical protein gene conserved hypothetical protein chr10 20255850 20257027 - CDS,downstream 9 LOC_Os06g01580 LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor gene LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor chr6 343157 343507 + CDS,promoter 9 LOC_Os02g14450 hypothetical protein gene hypothetical protein chr2 7952133 7953676 + CDS 9 LOC_Os01g73210 hypothetical protein gene hypothetical protein chr1 42442573 42442899 - CDS,downstream 9 LOC_Os02g07770 Myb transcription factor, putative gene Myb transcription factor, putative chr2 4058205 4060228 - CDS,downstream 9 LOC_Os05g46845 conserved hypothetical protein gene conserved hypothetical protein chr5 27061575 27062672 - CDS,three_prime_UTR,promoter 9 LOC_Os07g08850 hypothetical protein gene hypothetical protein chr7 4584209 4589667 + CDS 9 LOC_Os06g44290 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 26725078 26730902 + CDS,promoter 9 LOC_Os04g55950 expressed protein gene expressed protein chr4 33140107 33140633 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os05g11360 DTDP-D-glucose 4,6-dehydratase, putative gene DTDP-D-glucose 4,6-dehydratase, putative chr5 6416467 6417069 - CDS,promoter,downstream 9 LOC_Os01g72490 LRP1, putative, expressed gene LRP1, putative, expressed chr1 42036124 42038579 - three_prime_UTR,promoter 9 LOC_Os07g01770 expressed protein gene expressed protein chr7 451093 459151 - CDS 9 LOC_Os08g34460 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr8 21624331 21625392 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g05970 POEI12 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI12 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 3011673 3012929 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g35540 expressed protein gene expressed protein chr2 21367767 21370416 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os12g05609 OsFBO24 - F-box and other domain containing protein gene OsFBO24 - F-box and other domain containing protein chr12 2573327 2574586 - CDS 9 LOC_Os09g20220 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr9 12119285 12120334 - CDS,three_prime_UTR 9 LOC_Os08g09650 OsFBX269 - F-box domain containing protein gene OsFBX269 - F-box domain containing protein chr8 5575470 5577658 - CDS,promoter 9 LOC_Os05g12000 expressed protein gene expressed protein chr5 6863620 6864457 - CDS,three_prime_UTR,promoter 9 LOC_Os01g72730 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 42201403 42202851 + CDS 9 LOC_Os06g33880 expressed protein gene expressed protein chr6 19700311 19701381 + three_prime_UTR,downstream 9 LOC_Os08g40030 CUP-SHAPED COTYLEDON3, putative, expressed gene CUP-SHAPED COTYLEDON3, putative, expressed chr8 25348810 25351039 - CDS,promoter,downstream 9 LOC_Os12g30089 unknown gene unknown chr12 17992527 17993561 + CDS,downstream 9 LOC_Os11g30560 dehydrogenase/reductase, putative, expressed gene dehydrogenase/reductase, putative, expressed chr11 17318994 17326528 + CDS,promoter 9 LOC_Os05g28980 drought induced 19 protein, putative, expressed gene drought induced 19 protein, putative, expressed chr5 16928472 16935264 - five_prime_UTR,downstream 9 LOC_Os03g26990 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr3 15435032 15436433 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os12g09720 dirigent, putative gene dirigent, putative chr12 5131800 5134232 - CDS,downstream 9 LOC_Os06g45960 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 27843656 27847258 - CDS,promoter,downstream 9 LOC_Os08g02094 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr8 685288 692880 + three_prime_UTR 9 LOC_Os03g50310 CCT/B-box zinc finger protein, putative, expressed gene CCT/B-box zinc finger protein, putative, expressed chr3 28680012 28682770 + three_prime_UTR 9 LOC_Os02g17780 ent-kaurene synthase, chloroplast precursor, putative, expressed gene ent-kaurene synthase, chloroplast precursor, putative, expressed chr2 10273716 10283725 - CDS,downstream 9 LOC_Os04g04330 receptor-like protein kinase 2 precursor, putative, expressed gene receptor-like protein kinase 2 precursor, putative, expressed chr4 2030046 2034422 + five_prime_UTR,promoter 9 LOC_Os07g26110 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr7 14987570 14989869 + five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g48210 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 28530283 28535656 - CDS 9 LOC_Os12g27330 transferase family protein, putative gene transferase family protein, putative chr12 16049552 16052193 - CDS,promoter 9 LOC_Os11g30050 conserved hypothetical protein gene conserved hypothetical protein chr11 17013299 17017118 - CDS,downstream 9 LOC_Os12g13900 hypothetical protein gene hypothetical protein chr12 7875674 7876501 - CDS,downstream 9 LOC_Os05g51370 conserved hypothetical protein gene conserved hypothetical protein chr5 29395543 29396591 - CDS,promoter 9 LOC_Os05g28930 integral membrane protein DUF6 containing protein gene integral membrane protein DUF6 containing protein chr5 16894296 16900379 + CDS,promoter 9 LOC_Os07g07094 hypothetical protein gene hypothetical protein chr7 3504518 3511002 + CDS,promoter 9 LOC_Os04g33410 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 20061475 20063652 + CDS,promoter 9 LOC_Os06g36000 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr6 21039439 21040870 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g26980 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 16402632 16407073 - CDS 9 LOC_Os08g08990 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5232771 5233801 + five_prime_UTR,CDS,promoter 9 LOC_Os11g10200 OsFBX413 - F-box domain containing protein, expressed gene OsFBX413 - F-box domain containing protein, expressed chr11 5525826 5529939 - CDS 9 LOC_Os07g37370 hypothetical protein gene hypothetical protein chr7 22389691 22391575 + CDS 9 LOC_Os04g49700 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr4 29455445 29457430 + three_prime_UTR,downstream 9 LOC_Os07g35780 cysteine-rich receptor-like protein kinase 25 precursor, putative gene cysteine-rich receptor-like protein kinase 25 precursor, putative chr7 21427685 21430460 - CDS,downstream 9 LOC_Os07g06315 hypothetical protein gene hypothetical protein chr7 3070219 3071303 - CDS,promoter 9 LOC_Os07g32510 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr7 19361164 19363746 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g36239 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 20094972 20107524 - CDS,downstream 9 LOC_Os01g18120 cinnamoyl CoA reductase, putative, expressed gene cinnamoyl CoA reductase, putative, expressed chr1 10147753 10151496 + five_prime_UTR,CDS,promoter 9 LOC_Os08g39850 lipoxygenase, chloroplast precursor, putative, expressed gene lipoxygenase, chloroplast precursor, putative, expressed chr8 25238192 25247565 + CDS,five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os04g32820 expressed protein gene expressed protein chr4 19647435 19648496 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g19470 expressed protein gene expressed protein chr2 11376609 11379300 - five_prime_UTR,CDS,downstream 9 LOC_Os09g26410 unknown gene unknown chr9 15949527 15949966 + CDS,downstream 9 LOC_Os05g34400 hypothetical protein gene hypothetical protein chr5 20330586 20331321 + CDS,promoter,downstream 9 LOC_Os07g32680 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 19513897 19515320 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os08g17130 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 10482033 10489311 - CDS 9 LOC_Os04g46240 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr4 27213167 27214123 + CDS,promoter 9 LOC_Os04g56050 hypothetical protein gene hypothetical protein chr4 33193677 33195121 - CDS,promoter,downstream 9 LOC_Os01g22560 glycerol-3-phosphate acyltransferase 1, putative, expressed gene glycerol-3-phosphate acyltransferase 1, putative, expressed chr1 12676060 12677115 - CDS,three_prime_UTR 9 LOC_Os01g21740 expressed protein gene expressed protein chr1 12202376 12203052 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g41350 hypothetical protein gene hypothetical protein chr1 23396477 23399697 + CDS 9 LOC_Os03g08880 purine permease, putative, expressed gene purine permease, putative, expressed chr3 4597926 4599432 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g02460 expressed protein gene expressed protein chr6 849898 851289 + five_prime_UTR,CDS,promoter 9 LOC_Os01g72700 expressed protein gene expressed protein chr1 42183196 42186651 + three_prime_UTR,downstream 9 LOC_Os01g57590 hypothetical protein gene hypothetical protein chr1 33299783 33301618 - CDS 9 LOC_Os11g16450 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 9093203 9095922 + CDS,promoter 9 LOC_Os12g34300 OsFBX454 - F-box domain containing protein, expressed gene OsFBX454 - F-box domain containing protein, expressed chr12 20755376 20758553 + CDS 9 LOC_Os10g25870 dirigent, putative, expressed gene dirigent, putative, expressed chr10 13331409 13332263 - CDS,three_prime_UTR,promoter 9 LOC_Os04g58820 ATOFP18/OFP18, putative, expressed gene ATOFP18/OFP18, putative, expressed chr4 34803723 34805015 + five_prime_UTR,promoter 9 LOC_Os01g06090 expressed protein gene expressed protein chr1 2906052 2906920 - CDS,promoter 9 LOC_Os06g25950 expressed protein gene expressed protein chr6 15188170 15196539 + five_prime_UTR,promoter 9 LOC_Os12g44220 ATPase 2, putative, expressed gene ATPase 2, putative, expressed chr12 27392710 27394145 + five_prime_UTR,promoter 9 LOC_Os06g40780 MONOCULM 1, putative, expressed gene MONOCULM 1, putative, expressed chr6 24310311 24315385 + CDS,promoter,downstream 9 LOC_Os02g18650 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr2 10863849 10867220 - CDS,three_prime_UTR 9 LOC_Os04g52260 LTPL124 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL124 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr4 30876568 30877589 + three_prime_UTR,promoter 9 LOC_Os04g42260 protein phosphatase 2C, putative, expressed gene protein phosphatase 2C, putative, expressed chr4 24816353 24821482 + five_prime_UTR,promoter 9 LOC_Os12g09300 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr12 4880014 4883873 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os08g09950 acyl-desaturase, chloroplast precursor, putative, expressed gene acyl-desaturase, chloroplast precursor, putative, expressed chr8 5750425 5752750 - five_prime_UTR,CDS,downstream 9 LOC_Os01g64590 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr1 37471333 37472325 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g08750 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr11 4651264 4653408 + five_prime_UTR,CDS,promoter 9 LOC_Os07g01820 OsMADS15 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS15 - MADS-box family gene with MIKCc type-box, expressed chr7 470174 476655 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g36679 zinc knuckle domain containing protein gene zinc knuckle domain containing protein chr11 21187888 21191567 + five_prime_UTR,CDS,downstream 9 LOC_Os05g13620 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr5 7552437 7553837 + three_prime_UTR,downstream 9 LOC_Os10g34050 hypothetical protein gene hypothetical protein chr10 18101416 18103814 - CDS,promoter,downstream 9 LOC_Os02g15340 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr2 8582542 8584540 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g06480 inorganic H+ pyrophosphatase, putative, expressed gene inorganic H+ pyrophosphatase, putative, expressed chr5 3335223 3339792 - CDS 9 LOC_Os04g14990 BURP domain containing protein gene BURP domain containing protein chr4 8417767 8419903 + CDS,downstream 9 LOC_Os05g43709 unknown gene unknown chr5 25344585 25345019 - CDS,promoter 9 LOC_Os11g08640 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 4593412 4596946 + CDS 9 LOC_Os06g02640 ripening-related protein precursor, putative gene ripening-related protein precursor, putative chr6 936167 939109 - CDS 9 LOC_Os03g14669 core histone H2A/H2B/H3/H4, putative, expressed gene core histone H2A/H2B/H3/H4, putative, expressed chr3 7975783 7978322 - five_prime_UTR,CDS 9 LOC_Os03g25670 hypothetical protein gene hypothetical protein chr3 14693076 14695333 + CDS 9 LOC_Os06g28124 glycosyltransferase, putative, expressed gene glycosyltransferase, putative, expressed chr6 15967623 15973051 - five_prime_UTR,CDS,downstream 9 LOC_Os11g44600 calmodulin binding protein, putative, expressed gene calmodulin binding protein, putative, expressed chr11 26495780 26506176 + five_prime_UTR,promoter 9 LOC_Os12g12290 exostosin family domain containing protein, expressed gene exostosin family domain containing protein, expressed chr12 6753851 6755660 - CDS,promoter,downstream 9 LOC_Os02g46170 hypothetical protein gene hypothetical protein chr2 28127354 28128414 + CDS,promoter,downstream 9 LOC_Os04g31350 expressed protein gene expressed protein chr4 18585729 18586893 - five_prime_UTR,downstream 9 LOC_Os11g07550 hypothetical protein gene hypothetical protein chr11 3820417 3822034 + CDS,downstream 9 LOC_Os04g41229 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr4 24276007 24283810 + CDS 9 LOC_Os09g39060 vignain precursor, putative, expressed gene vignain precursor, putative, expressed chr9 22420417 22422077 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os05g15690 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr5 8870288 8871873 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g33500 conserved hypothetical protein gene conserved hypothetical protein chr10 17580874 17589897 + CDS 9 LOC_Os08g44050 ZOS8-12 - C2H2 zinc finger protein, expressed gene ZOS8-12 - C2H2 zinc finger protein, expressed chr8 27730405 27736989 - three_prime_UTR,promoter 9 LOC_Os11g45730 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr11 27188843 27190996 - CDS,three_prime_UTR 9 LOC_Os01g60740 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr1 35128815 35129874 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os02g21840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 12979884 12984879 + CDS,promoter,downstream 9 LOC_Os03g27540 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr3 15796641 15799610 + CDS,promoter,downstream 9 LOC_Os04g46350 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr4 27292442 27294580 - three_prime_UTR,promoter,downstream 9 LOC_Os07g35560 glucan endo-1,3-beta-glucosidase precursor, putative, expressed gene glucan endo-1,3-beta-glucosidase precursor, putative, expressed chr7 21279307 21281644 - five_prime_UTR,CDS 9 LOC_Os10g30480 hypothetical protein gene hypothetical protein chr10 15786952 15788044 - CDS,downstream 9 LOC_Os05g31390 hypothetical protein gene hypothetical protein chr5 18187703 18190031 + CDS,promoter 9 LOC_Os01g60500 hypothetical protein gene hypothetical protein chr1 34986283 34987440 - CDS,promoter,downstream 9 LOC_Os10g05900 expressed protein gene expressed protein chr10 2977399 2980483 + CDS,three_prime_UTR,downstream 9 LOC_Os08g28400 expressed protein gene expressed protein chr8 17317823 17320524 - five_prime_UTR,CDS,downstream 9 LOC_Os07g05680 hypothetical protein gene hypothetical protein chr7 2710261 2711985 - CDS,downstream 9 LOC_Os02g54590 serine threonine kinase, putative, expressed gene serine threonine kinase, putative, expressed chr2 33428220 33433345 + CDS 9 LOC_Os06g44280 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr6 26713869 26716573 + CDS,three_prime_UTR,downstream 9 LOC_Os01g74410 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 43095348 43096930 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os02g52930 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr2 32353232 32356142 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g42100 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 24735184 24739515 - five_prime_UTR,CDS,downstream 9 LOC_Os06g49850 expressed protein gene expressed protein chr6 30179083 30179836 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g18330 transcription factor like protein, putative gene transcription factor like protein, putative chr3 10273792 10274436 + CDS,downstream 9 LOC_Os06g50950 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr6 30836991 30838954 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g18960 embryogenesis transmembrane protein, putative, expressed gene embryogenesis transmembrane protein, putative, expressed chr6 10779800 10783834 - CDS 9 LOC_Os01g09900 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 5147694 5149648 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g30500 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 17629575 17631349 - CDS 9 LOC_Os03g58140 transmembrane BAX inhibitor motif-containing protein, putative, expressed gene transmembrane BAX inhibitor motif-containing protein, putative, expressed chr3 33091743 33094354 - CDS 9 LOC_Os05g03320 expressed protein gene expressed protein chr5 1348456 1354725 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os06g13399 unknown gene unknown chr6 7372075 7372597 + CDS,promoter 9 LOC_Os04g56150 AP2 domain containing protein gene AP2 domain containing protein chr4 33252077 33252646 - CDS,downstream 9 LOC_Os12g35490 expressed protein gene expressed protein chr12 21544451 21548243 - five_prime_UTR,CDS 9 LOC_Os06g30730 ABC-2 type transporter domain containing protein, expressed gene ABC-2 type transporter domain containing protein, expressed chr6 17821287 17823818 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g04281 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr11 1773368 1774024 + CDS,promoter 9 LOC_Os08g23880 No apical meristem protein, putative gene No apical meristem protein, putative chr8 14451495 14452838 + CDS,downstream 9 LOC_Os10g21110 glycosyl hydrolase family 10 protein, putative, expressed gene glycosyl hydrolase family 10 protein, putative, expressed chr10 10656138 10659750 + CDS,three_prime_UTR 9 LOC_Os03g01860 hypothetical protein gene hypothetical protein chr3 517800 518793 + CDS,promoter,downstream 9 LOC_Os11g39800 hypothetical protein gene hypothetical protein chr11 23259065 23259980 - CDS,downstream 9 LOC_Os08g35510 cytochrome P450, putative gene cytochrome P450, putative chr8 22366664 22368226 - CDS,downstream 9 LOC_Os04g20540 anthocyanidin 3-O-glucosyltransferase, putative, expressed gene anthocyanidin 3-O-glucosyltransferase, putative, expressed chr4 11462795 11464271 + CDS,promoter 9 LOC_Os02g45160 aluminum-activated malate transporter, putative, expressed gene aluminum-activated malate transporter, putative, expressed chr2 27384978 27388319 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g11640 hypothetical protein gene hypothetical protein chr11 6469084 6469449 + CDS,promoter 9 LOC_Os04g21570 fasciclin-like arabinogalactan precursor protein, putative, expressed gene fasciclin-like arabinogalactan precursor protein, putative, expressed chr4 12187757 12188609 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g02380 hypothetical protein gene hypothetical protein chr4 854926 856145 - CDS,downstream 9 LOC_Os09g06940 expressed protein gene expressed protein chr9 3344558 3347774 + five_prime_UTR 9 LOC_Os11g25880 hypothetical protein gene hypothetical protein chr11 14286601 14289917 + CDS 9 LOC_Os03g28969 hypothetical protein gene hypothetical protein chr3 16442245 16444762 - CDS,promoter 9 LOC_Os01g18110 cinnamoyl CoA reductase, putative, expressed gene cinnamoyl CoA reductase, putative, expressed chr1 10143268 10145288 + CDS,downstream 9 LOC_Os09g12840 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr9 7377520 7379640 - CDS,promoter,downstream 9 LOC_Os10g12050 expressed protein gene expressed protein chr10 6714354 6718108 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os02g37160 heavy metal transport/detoxification protein, putative, expressed gene heavy metal transport/detoxification protein, putative, expressed chr2 22462311 22463919 - five_prime_UTR,downstream 9 LOC_Os06g11970 OsMADS63 - MADS-box family gene with MIKC* type-box, expressed gene OsMADS63 - MADS-box family gene with MIKC* type-box, expressed chr6 6371354 6375375 + CDS,promoter 9 LOC_Os06g08380 1,3-beta-glucan synthase component domain containing protein, expressed gene 1,3-beta-glucan synthase component domain containing protein, expressed chr6 4065763 4082812 - CDS 9 LOC_Os01g37000 carboxyl-terminal peptidase, putative, expressed gene carboxyl-terminal peptidase, putative, expressed chr1 20639936 20642841 + five_prime_UTR,CDS,promoter 9 LOC_Os12g42810 mov34/MPN/PAD-1 family protein, expressed gene mov34/MPN/PAD-1 family protein, expressed chr12 26566126 26571177 + CDS 9 LOC_Os02g56490 expressed protein gene expressed protein chr2 34578332 34579354 - five_prime_UTR,downstream 9 LOC_Os11g46950 wall-associated receptor kinase-like 18 precursor, putative, expressed gene wall-associated receptor kinase-like 18 precursor, putative, expressed chr11 27691989 27700043 + CDS,three_prime_UTR 9 LOC_Os09g13720 hypothetical protein gene hypothetical protein chr9 8025832 8029268 + CDS,downstream 9 LOC_Os04g34090 expressed protein gene expressed protein chr4 20479920 20480838 + CDS,promoter 9 LOC_Os04g33550 hypothetical protein gene hypothetical protein chr4 20118934 20119438 + CDS,downstream 9 LOC_Os11g22530 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 12478111 12486721 - CDS 9 LOC_Os12g36440 conserved hypothetical protein gene conserved hypothetical protein chr12 22263065 22268432 - CDS,promoter 9 LOC_Os01g14300 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 8011037 8012807 + CDS,promoter 9 LOC_Os11g26750 dehydrin, putative, expressed gene dehydrin, putative, expressed chr11 14856502 14857840 - five_prime_UTR,downstream 9 LOC_Os02g18500 chlorophyllase-2, chloroplast precursor, putative gene chlorophyllase-2, chloroplast precursor, putative chr2 10772433 10773887 - CDS 9 LOC_Os01g27190 C2 domain containing protein, putative, expressed gene C2 domain containing protein, putative, expressed chr1 15159397 15160614 + CDS,three_prime_UTR 9 LOC_Os08g29330 hypothetical protein gene hypothetical protein chr8 17991223 17991737 - CDS,downstream 9 LOC_Os08g36530 aspartic proteinase nepenthesin precursor, putative gene aspartic proteinase nepenthesin precursor, putative chr8 23062921 23064267 + CDS,downstream 9 LOC_Os09g15730 hypothetical protein gene hypothetical protein chr9 9608001 9608858 + CDS,promoter,downstream 9 LOC_Os03g04680 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 2222098 2224201 + five_prime_UTR,promoter 9 LOC_Os07g09530 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr7 5029627 5032825 + CDS,promoter 9 LOC_Os12g30630 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 18366907 18379812 + CDS,promoter 9 LOC_Os10g09160 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 4963473 4964942 + CDS,promoter 9 LOC_Os04g47080 anthocyanin regulatory Lc protein, putative, expressed gene anthocyanin regulatory Lc protein, putative, expressed chr4 27764248 27770504 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g03790 AMP-binding domain containing protein, expressed gene AMP-binding domain containing protein, expressed chr3 1705047 1707332 + five_prime_UTR,CDS,promoter 9 LOC_Os10g30330 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr10 15680664 15682345 + five_prime_UTR,CDS,promoter 9 LOC_Os04g36640 dehydration-responsive element-binding protein, putative gene dehydration-responsive element-binding protein, putative chr4 21946876 21947430 - CDS,downstream 9 LOC_Os08g07170 cytokinin-O-glucosyltransferase 2, putative gene cytokinin-O-glucosyltransferase 2, putative chr8 4010374 4012278 + CDS,promoter,downstream 9 LOC_Os06g02630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr6 932131 935450 - CDS,downstream 9 LOC_Os03g18860 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr3 10563626 10565722 - CDS,three_prime_UTR 9 LOC_Os05g16150 hypothetical protein gene hypothetical protein chr5 9135824 9137351 - CDS,downstream 9 LOC_Os03g25869 amino acid permease family protein, putative, expressed gene amino acid permease family protein, putative, expressed chr3 14788817 14796715 - CDS 9 LOC_Os10g22940 hypothetical protein gene hypothetical protein chr10 11860444 11862872 - CDS,downstream 9 LOC_Os05g19600 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr5 11418057 11419529 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g30460 conserved hypothetical protein gene conserved hypothetical protein chr4 18025994 18028007 + CDS 9 LOC_Os03g08410 flavin-containing monooxygenase family protein, putative, expressed gene flavin-containing monooxygenase family protein, putative, expressed chr3 4310294 4313315 + CDS,promoter,downstream 9 LOC_Os10g40230 hypothetical protein gene hypothetical protein chr10 21473875 21475745 + CDS,promoter 9 LOC_Os12g34270 OsFBX452 - F-box domain containing protein gene OsFBX452 - F-box domain containing protein chr12 20741638 20744077 + CDS 9 LOC_Os01g22640 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 12733072 12737086 + five_prime_UTR,promoter 9 LOC_Os11g46870 protein kinase, putative gene protein kinase, putative chr11 27618971 27625116 + CDS,promoter,downstream 9 LOC_Os07g46510 expressed protein gene expressed protein chr7 27780063 27780999 + three_prime_UTR,downstream 9 LOC_Os03g45450 OsWRKY60 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY60 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr3 25649057 25650143 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os07g37540 hypothetical protein gene hypothetical protein chr7 22485138 22485464 + CDS,promoter,downstream 9 LOC_Os11g29014 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 16326852 16331739 - CDS,downstream 9 LOC_Os02g06754 expressed protein gene expressed protein chr2 3408022 3409074 + three_prime_UTR,downstream 9 LOC_Os01g50530 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 29023306 29024781 + CDS,promoter,downstream 9 LOC_Os07g15940 legume lectins beta domain containing protein, expressed gene legume lectins beta domain containing protein, expressed chr7 9259550 9261836 - CDS,three_prime_UTR 9 LOC_Os02g52630 xyloglucan fucosyltransferase, putative, expressed gene xyloglucan fucosyltransferase, putative, expressed chr2 32185378 32188120 + five_prime_UTR,promoter 9 LOC_Os04g56690 OsSAUR23 - Auxin-responsive SAUR gene family member gene OsSAUR23 - Auxin-responsive SAUR gene family member chr4 33619219 33620361 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g13320 protein kinase, putative, expressed gene protein kinase, putative, expressed chr6 7324615 7326450 - five_prime_UTR,downstream 9 LOC_Os08g30590 C1-like domain containing protein, expressed gene C1-like domain containing protein, expressed chr8 18847067 18850199 - CDS,promoter 9 LOC_Os06g45940 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr6 27818966 27826495 + CDS 9 LOC_Os12g43540 hypothetical protein gene hypothetical protein chr12 26981668 26982581 - CDS,promoter,downstream 9 LOC_Os02g57520 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr2 35236276 35237982 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g43290 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 24134122 24138468 - CDS,downstream 9 LOC_Os12g34210 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 20699632 20710898 + CDS,downstream 9 LOC_Os04g30340 wall-associated receptor kinase, putative gene wall-associated receptor kinase, putative chr4 17933437 17934750 - CDS 9 LOC_Os05g20570 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr5 12069435 12070495 + CDS,three_prime_UTR 9 LOC_Os01g13310 DNA topoisomerase 2, putative gene DNA topoisomerase 2, putative chr1 7423284 7426642 - CDS,downstream 9 LOC_Os07g09290 hypothetical protein gene hypothetical protein chr7 4864037 4865349 - CDS 9 LOC_Os01g09150 expressed protein gene expressed protein chr1 4595060 4595812 + CDS,promoter,downstream 9 LOC_Os06g37240 hypothetical protein gene hypothetical protein chr6 21995508 21996114 + CDS,downstream 9 LOC_Os04g01140 cytochrome P450 93A2, putative, expressed gene cytochrome P450 93A2, putative, expressed chr4 98618 100643 - five_prime_UTR,CDS,downstream 9 LOC_Os12g03680 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 1476356 1486011 - CDS 9 LOC_Os11g37900 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr11 22002124 22005358 - CDS 9 LOC_Os11g46880 protein kinase domain containing protein gene protein kinase domain containing protein chr11 27636678 27642080 + CDS,promoter,downstream 9 LOC_Os02g30950 hypothetical protein gene hypothetical protein chr2 18484715 18485941 + CDS,promoter 9 LOC_Os06g19500 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein gene oxidoreductase, short chain dehydrogenase/reductase family domain containing protein chr6 11102009 11104190 - CDS,promoter,downstream 9 LOC_Os03g17350 white-brown complex homolog protein, putative, expressed gene white-brown complex homolog protein, putative, expressed chr3 9653266 9655992 + CDS,three_prime_UTR,downstream 9 LOC_Os12g09640 protein phosphatase 2C, putative, expressed gene protein phosphatase 2C, putative, expressed chr12 5075188 5079834 - CDS 9 LOC_Os11g12560 receptor-like protein kinase HAIKU2 precursor, putative gene receptor-like protein kinase HAIKU2 precursor, putative chr11 7052259 7057155 - CDS,promoter 9 LOC_Os02g37800 lecithin:cholesterol acyltransferase, putative, expressed gene lecithin:cholesterol acyltransferase, putative, expressed chr2 22799776 22802653 - CDS 9 LOC_Os02g30910 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr2 18448535 18451267 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g48200 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 28518790 28523047 - five_prime_UTR,CDS,promoter 9 LOC_Os07g35800 hypothetical protein gene hypothetical protein chr7 21437154 21439203 + CDS,downstream 9 LOC_Os04g59160 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 35007075 35008660 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os04g47840 expressed protein gene expressed protein chr4 28208614 28209325 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g42180 ethylene-responsive protein related, putative gene ethylene-responsive protein related, putative chr5 24601334 24603529 + CDS,promoter,downstream 9 LOC_Os02g36210 ent-kaurene synthase, chloroplast precursor, putative, expressed gene ent-kaurene synthase, chloroplast precursor, putative, expressed chr2 21835190 21841968 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os05g34980 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr5 20716511 20718724 + five_prime_UTR,promoter 9 LOC_Os04g02580 expressed protein gene expressed protein chr4 963519 965318 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os07g34529 expressed protein gene expressed protein chr7 20701220 20704823 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os08g05480 OsFBX261 - F-box domain containing protein, expressed gene OsFBX261 - F-box domain containing protein, expressed chr8 2917639 2920284 + CDS,promoter 9 LOC_Os02g36440 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr2 22001604 22006231 + CDS,promoter,downstream 9 LOC_Os09g33640 expressed protein gene expressed protein chr9 19867717 19868313 + CDS,downstream 9 LOC_Os02g02400 catalase isozyme A, putative, expressed gene catalase isozyme A, putative, expressed chr2 824850 827644 - CDS 9 LOC_Os08g30634 DC1 domain containing protein, expressed gene DC1 domain containing protein, expressed chr8 18873687 18889601 - three_prime_UTR,promoter 9 LOC_Os04g41890 hypothetical protein gene hypothetical protein chr4 24640391 24642484 - CDS,downstream 9 LOC_Os01g67890 OsMADS96 - MADS-box family gene with M-beta type-box gene OsMADS96 - MADS-box family gene with M-beta type-box chr1 39458556 39460007 - CDS,promoter 9 LOC_Os02g02790 C2 domain containing protein, expressed gene C2 domain containing protein, expressed chr2 1061877 1066213 + five_prime_UTR,CDS,promoter 9 LOC_Os07g23960 transferase family protein, putative gene transferase family protein, putative chr7 13555190 13557268 + CDS,downstream 9 LOC_Os07g34390 ankyrin repeat family protein, putative, expressed gene ankyrin repeat family protein, putative, expressed chr7 20614721 20619604 + CDS 9 LOC_Os05g31470 expressed protein gene expressed protein chr5 18246346 18247471 - five_prime_UTR,CDS,downstream 9 LOC_Os05g14130 ZOS5-05 - C2H2 zinc finger protein gene ZOS5-05 - C2H2 zinc finger protein chr5 7893642 7894274 + CDS,promoter,downstream 9 LOC_Os02g54520 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 33392995 33397131 + CDS,promoter,downstream 9 LOC_Os04g34740 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 20869475 20871171 - CDS,promoter 9 LOC_Os06g46270 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr6 28036571 28040911 + five_prime_UTR,promoter 9 LOC_Os07g17520 conserved hypothetical protein gene conserved hypothetical protein chr7 10352064 10354304 - CDS,downstream 9 LOC_Os11g42970 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr11 25429716 25431138 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g04490 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr5 2073595 2075358 + five_prime_UTR,CDS,promoter 9 LOC_Os05g12630 expressed protein gene expressed protein chr5 7249920 7251339 + CDS,three_prime_UTR,five_prime_UTR,downstream 9 LOC_Os02g31940 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr2 18866419 18872631 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g13020 hypothetical protein gene hypothetical protein chr1 7238721 7239957 + CDS,promoter 9 LOC_Os03g27810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 15948641 15949540 + CDS 9 LOC_Os12g37320 lipoxygenase 2.2, chloroplast precursor, putative, expressed gene lipoxygenase 2.2, chloroplast precursor, putative, expressed chr12 22886566 22890237 + CDS,promoter 9 LOC_Os10g02220 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr10 770655 775323 - CDS,three_prime_UTR 9 LOC_Os08g19820 hypothetical protein gene hypothetical protein chr8 11858505 11860580 - CDS,promoter 9 LOC_Os12g08760 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed gene carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed chr12 4498724 4502978 + CDS,three_prime_UTR 9 LOC_Os11g24840 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr11 13700539 13701865 - CDS 9 LOC_Os01g14700 conserved hypothetical protein gene conserved hypothetical protein chr1 8228201 8228903 + CDS,promoter,downstream 9 LOC_Os09g32992 expressed protein gene expressed protein chr9 19695876 19698352 - three_prime_UTR 9 LOC_Os04g33740 glycosyl hydrolases, putative, expressed gene glycosyl hydrolases, putative, expressed chr4 20250215 20255106 + CDS,downstream 9 LOC_Os06g38120 low-affinity cation transporter, putative, expressed gene low-affinity cation transporter, putative, expressed chr6 22565778 22570985 + CDS,three_prime_UTR,promoter 9 LOC_Os10g20610 laccase-15 precursor, putative, expressed gene laccase-15 precursor, putative, expressed chr10 10319700 10325441 - five_prime_UTR,CDS,downstream 9 LOC_Os10g05470 hypothetical protein gene hypothetical protein chr10 2697779 2701404 - CDS,promoter 9 LOC_Os04g06734 expressed protein gene expressed protein chr4 3535307 3543566 + CDS 9 LOC_Os07g04060 expressed protein gene expressed protein chr7 1716523 1718991 - CDS,downstream 9 LOC_Os05g35370 hypothetical protein gene hypothetical protein chr5 20936003 20938736 - CDS,promoter,downstream 9 LOC_Os04g32840 formin-like protein 20, putative, expressed gene formin-like protein 20, putative, expressed chr4 19654349 19655939 - five_prime_UTR,CDS,downstream 9 LOC_Os01g55240 gibberellin 2-beta-dioxygenase, putative, expressed gene gibberellin 2-beta-dioxygenase, putative, expressed chr1 31794061 31796599 + CDS,three_prime_UTR,promoter 9 LOC_Os11g32030 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr11 18407869 18410840 + five_prime_UTR,CDS,promoter 9 LOC_Os11g43729 unknown gene unknown chr11 25931209 25931825 - CDS,downstream 9 LOC_Os03g21700 DNA-binding protein, putative, expressed gene DNA-binding protein, putative, expressed chr3 12388782 12390336 + five_prime_UTR,promoter,downstream 9 LOC_Os11g42700 NBS-LRR type disease resistance protein, putative gene NBS-LRR type disease resistance protein, putative chr11 25254420 25255631 + CDS,promoter 9 LOC_Os12g44100 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr12 27312522 27317096 - five_prime_UTR,downstream 9 LOC_Os02g51280 TCP-domain protein, putative, expressed gene TCP-domain protein, putative, expressed chr2 31390838 31393236 + three_prime_UTR,downstream 9 LOC_Os01g63980 ZOS1-17 - C2H2 zinc finger protein, expressed gene ZOS1-17 - C2H2 zinc finger protein, expressed chr1 37145874 37148157 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os10g05695 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 2862818 2866792 + five_prime_UTR,CDS,promoter 9 LOC_Os08g33929 unknown gene unknown chr8 21233130 21233860 + CDS,promoter 9 LOC_Os02g42280 UDP-glucoronosyl/UDP-glucosyl transferase family protein, putative, expressed gene UDP-glucoronosyl/UDP-glucosyl transferase family protein, putative, expressed chr2 25417824 25420552 - CDS,promoter 9 LOC_Os11g36020 leucine rich repeat protein, putative gene leucine rich repeat protein, putative chr11 20709596 20711533 + CDS 9 LOC_Os05g39830 expressed protein gene expressed protein chr5 23345422 23346501 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g05110 PLA IIIA/PLP7, putative, expressed gene PLA IIIA/PLP7, putative, expressed chr7 2256321 2258136 + three_prime_UTR,promoter,downstream 9 LOC_Os10g22450 inositol-3-phosphate synthase, putative, expressed gene inositol-3-phosphate synthase, putative, expressed chr10 11553207 11558450 + CDS 9 LOC_Os10g41270 triacylglycerol lipase like protein, putative gene triacylglycerol lipase like protein, putative chr10 22109262 22110866 + CDS,downstream 9 LOC_Os07g05270 hypothetical protein gene hypothetical protein chr7 2376435 2376826 + CDS,promoter,downstream 9 LOC_Os01g62960 hypothetical protein gene hypothetical protein chr1 36477006 36477627 - CDS,promoter,downstream 9 LOC_Os06g17570 embryogenesis transmembrane protein, putative gene embryogenesis transmembrane protein, putative chr6 10196995 10198370 - CDS,downstream 9 LOC_Os01g46620 hypothetical protein gene hypothetical protein chr1 26539376 26539729 - CDS 9 LOC_Os03g61160 expressed protein gene expressed protein chr3 34731876 34733525 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os08g35760 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 22555180 22556384 - three_prime_UTR,promoter 9 LOC_Os08g24790 AIR12, putative, expressed gene AIR12, putative, expressed chr8 15006049 15007040 + five_prime_UTR,CDS,promoter 9 LOC_Os04g38660 transmembrane amino acid transporter protein, putative gene transmembrane amino acid transporter protein, putative chr4 22784737 22785856 + CDS,promoter,downstream 9 LOC_Os11g26795 hypothetical protein gene hypothetical protein chr11 14884145 14884387 + CDS,promoter,downstream 9 LOC_Os04g47860 ZOS4-11 - C2H2 zinc finger protein, expressed gene ZOS4-11 - C2H2 zinc finger protein, expressed chr4 28223519 28230884 + three_prime_UTR 9 LOC_Os08g30420 hypothetical protein gene hypothetical protein chr8 18714238 18714454 - CDS,promoter,downstream 9 LOC_Os07g04670 DUF640 domain containing protein, putative gene DUF640 domain containing protein, putative chr7 2066345 2067175 - CDS,promoter,downstream 9 LOC_Os03g56110 homeobox protein knotted-1, putative, expressed gene homeobox protein knotted-1, putative, expressed chr3 31957459 31963404 + CDS,five_prime_UTR,promoter 9 LOC_Os04g03980 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr4 1809545 1811668 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g50440 AWPM-19-like membrane family protein, putative, expressed gene AWPM-19-like membrane family protein, putative, expressed chr1 28954638 28955996 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g72370 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 41970401 41977365 - CDS,three_prime_UTR,downstream 9 LOC_Os08g39400 hypothetical protein gene hypothetical protein chr8 24911922 24912335 - CDS,downstream 9 LOC_Os02g14150 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 7743037 7746697 - CDS,downstream 9 LOC_Os10g33460 alcohol oxidase, putative, expressed gene alcohol oxidase, putative, expressed chr10 17547887 17552415 - CDS,downstream 9 LOC_Os04g49770 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 29488328 29489949 + CDS,downstream 9 LOC_Os07g11330 RAL2 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed gene RAL2 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed chr7 6243131 6243881 - CDS,three_prime_UTR 9 LOC_Os11g38360 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 22249196 22253093 - CDS 9 LOC_Os05g04640 OsWRKY5 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY5 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr5 2179495 2184915 - CDS,promoter,downstream 9 LOC_Os02g54570 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr2 33421376 33421912 - CDS,promoter,downstream 9 LOC_Os05g45460 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr5 26308843 26310223 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g39310 hypothetical protein gene hypothetical protein chr2 23732381 23732650 - CDS,promoter 9 LOC_Os03g10150 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr3 5149968 5151040 - CDS,three_prime_UTR 9 LOC_Os04g10060 ent-kaurene synthase, chloroplast precursor, putative, expressed gene ent-kaurene synthase, chloroplast precursor, putative, expressed chr4 5423779 5429469 - five_prime_UTR,CDS,downstream 9 LOC_Os01g46850 expressed protein gene expressed protein chr1 26721684 26723875 + CDS,three_prime_UTR,downstream 9 LOC_Os01g48550 expressed protein gene expressed protein chr1 27842349 27843831 - CDS,downstream 9 LOC_Os02g31840 expressed protein gene expressed protein chr2 18799614 18800720 - three_prime_UTR,downstream 9 LOC_Os05g32460 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr5 18896098 18897631 - three_prime_UTR,promoter 9 LOC_Os02g42950 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr2 25833442 25836860 - CDS,three_prime_UTR,five_prime_UTR,promoter,downstream 9 LOC_Os02g51930 cytokinin-O-glucosyltransferase 2, putative, expressed gene cytokinin-O-glucosyltransferase 2, putative, expressed chr2 31800108 31802022 + CDS,three_prime_UTR,downstream 9 LOC_Os07g30640 ubiquitin fusion protein, putative, expressed gene ubiquitin fusion protein, putative, expressed chr7 18132358 18134360 - CDS,downstream 9 LOC_Os11g38890 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 22682774 22688527 + CDS,downstream 9 LOC_Os05g07720 alliin lyase precursor, putative, expressed gene alliin lyase precursor, putative, expressed chr5 4152882 4155872 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g26430 OsWRKY42 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY42 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr2 15515627 15516854 + CDS 9 LOC_Os08g07700 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr8 4302905 4303699 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g22670 hypothetical protein gene hypothetical protein chr10 11708775 11709484 + CDS,promoter 9 LOC_Os03g52370 PIII4 - Proteinase inhibitor II family protein precursor, expressed gene PIII4 - Proteinase inhibitor II family protein precursor, expressed chr3 30067963 30068780 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g08510 ZOS2-04 - C2H2 zinc finger protein, expressed gene ZOS2-04 - C2H2 zinc finger protein, expressed chr2 4594372 4595383 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os07g05030 hypothetical protein gene hypothetical protein chr7 2217288 2218458 + CDS,promoter,downstream 9 LOC_Os12g26290 alpha-DOX2, putative, expressed gene alpha-DOX2, putative, expressed chr12 15327444 15337803 - five_prime_UTR,CDS 9 LOC_Os09g39930 tyrosine protein kinase domain containing protein, putative, expressed gene tyrosine protein kinase domain containing protein, putative, expressed chr9 22902458 22904354 + three_prime_UTR,promoter,downstream 9 LOC_Os11g33970 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr11 19392528 19404823 + CDS,three_prime_UTR 9 LOC_Os07g13900 OsFBLD4 - F-box, LRR and FBD domain containing protein gene OsFBLD4 - F-box, LRR and FBD domain containing protein chr7 7949632 7951167 + CDS 9 LOC_Os03g31210 UDP-glucose 6-dehydrogenase, putative, expressed gene UDP-glucose 6-dehydrogenase, putative, expressed chr3 17773121 17775182 + CDS,three_prime_UTR,downstream 9 LOC_Os03g59860 conserved hypothetical protein gene conserved hypothetical protein chr3 34070132 34072069 - CDS,downstream 9 LOC_Os04g48000 hypothetical protein gene hypothetical protein chr4 28372246 28372684 - CDS,promoter,downstream 9 LOC_Os09g07630 conserved hypothetical protein gene conserved hypothetical protein chr9 3836155 3837172 - CDS 9 LOC_Os08g43260 hypothetical protein gene hypothetical protein chr8 27349958 27350988 + CDS,promoter 9 LOC_Os04g29274 expressed protein gene expressed protein chr4 17184972 17188006 - CDS,downstream 9 LOC_Os12g41270 cysteine-rich receptor-like protein kinase 20 precursor, putative gene cysteine-rich receptor-like protein kinase 20 precursor, putative chr12 25559004 25564343 + CDS,promoter 9 LOC_Os01g52550 ABC transporter, ATP-binding protein, putative, expressed gene ABC transporter, ATP-binding protein, putative, expressed chr1 30188214 30194414 - five_prime_UTR,downstream 9 LOC_Os11g29980 disease resistance RPP13-like protein 1, putative gene disease resistance RPP13-like protein 1, putative chr11 16959399 16962861 - CDS,promoter 9 LOC_Os07g40950 ZOS7-12 - C2H2 zinc finger protein gene ZOS7-12 - C2H2 zinc finger protein chr7 24511742 24512725 - CDS,promoter,downstream 9 LOC_Os05g34150 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr5 20129834 20131259 - three_prime_UTR,promoter,downstream 9 LOC_Os12g37510 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr12 22982278 22984116 - CDS,three_prime_UTR 9 LOC_Os07g40170 hypothetical protein gene hypothetical protein chr7 24100437 24101074 + CDS,promoter,downstream 9 LOC_Os04g13140 vignain precursor, putative, expressed gene vignain precursor, putative, expressed chr4 7245628 7247116 + five_prime_UTR,CDS,promoter 9 LOC_Os04g23360 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 13336259 13343287 - CDS 9 LOC_Os07g11310 LTPL166 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL166 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 6237912 6238616 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g11620 expressed protein gene expressed protein chr5 6582074 6582829 + five_prime_UTR,CDS,promoter 9 LOC_Os02g45280 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 27501360 27505222 - CDS,promoter,downstream 9 LOC_Os10g31500 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 16429433 16430513 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g03010 hypothetical protein gene hypothetical protein chr3 1228806 1229350 - CDS,promoter,downstream 9 LOC_Os02g37490 glycine-rich cell wall structural protein precursor, putative, expressed gene glycine-rich cell wall structural protein precursor, putative, expressed chr2 22620403 22621322 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g28137 ATPase 3, putative, expressed gene ATPase 3, putative, expressed chr12 16614032 16616018 + three_prime_UTR 9 LOC_Os09g20170 expressed protein gene expressed protein chr9 12079450 12080867 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g24420 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 14300913 14309736 + CDS,promoter 9 LOC_Os11g09590 OsFBX404 - F-box domain containing protein, expressed gene OsFBX404 - F-box domain containing protein, expressed chr11 5125064 5127138 + three_prime_UTR,promoter 9 LOC_Os01g59710 hypothetical protein gene hypothetical protein chr1 34544930 34546596 + CDS,downstream 9 LOC_Os11g07980 ion channel nompc, putative, expressed gene ion channel nompc, putative, expressed chr11 4145989 4150642 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os09g39920 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr9 22896708 22902150 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g08470 OsFBX116 - F-box domain containing protein gene OsFBX116 - F-box domain containing protein chr4 4560006 4567026 - CDS 9 LOC_Os12g41070 hypothetical protein gene hypothetical protein chr12 25387250 25387621 + CDS,promoter,downstream 9 LOC_Os12g22880 hypothetical protein gene hypothetical protein chr12 12908847 12910514 + CDS 9 LOC_Os03g05590 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr3 2799286 2799920 + three_prime_UTR,promoter,downstream 9 LOC_Os03g47620 ankyrin, putative gene ankyrin, putative chr3 26955758 26963272 + CDS,downstream 9 LOC_Os11g29870 OsWRKY72 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY72 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr11 16885937 16889672 + five_prime_UTR,promoter 9 LOC_Os02g14570 hydroquinone glucosyltransferase, putative, expressed gene hydroquinone glucosyltransferase, putative, expressed chr2 8033811 8035456 - five_prime_UTR,CDS,downstream 9 LOC_Os04g45060 MYB family transcription factor, putative gene MYB family transcription factor, putative chr4 26474876 26476274 + CDS,promoter,downstream 9 LOC_Os09g27650 ZOS9-14 - C2H2 zinc finger protein, expressed gene ZOS9-14 - C2H2 zinc finger protein, expressed chr9 16821233 16824685 + three_prime_UTR,promoter,downstream 9 LOC_Os12g40940 expressed protein gene expressed protein chr12 25311775 25313248 + five_prime_UTR,promoter 9 LOC_Os11g05580 conserved hypothetical protein gene conserved hypothetical protein chr11 2530443 2531819 - CDS,promoter 9 LOC_Os01g73190 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 42435545 42436776 + CDS,promoter 9 LOC_Os05g15870 hypothetical protein gene hypothetical protein chr5 8955222 8957956 - CDS,downstream 9 LOC_Os05g22300 transferase family protein, putative gene transferase family protein, putative chr5 12564386 12565886 + CDS,downstream 9 LOC_Os08g04250 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr8 2065232 2066783 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g51320 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr2 31418074 31419370 - three_prime_UTR,promoter,downstream 9 LOC_Os11g08180 aspartic proteinase Asp1 precursor, putative gene aspartic proteinase Asp1 precursor, putative chr11 4283830 4284255 + CDS 9 LOC_Os07g04340 expressed protein gene expressed protein chr7 1924716 1926109 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g29250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 17171771 17173399 + CDS,downstream 9 LOC_Os11g43980 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr11 26100667 26102534 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g03960 CPuORF1 - conserved peptide uORF-containing transcript, expressed gene CPuORF1 - conserved peptide uORF-containing transcript, expressed chr2 1695454 1697219 - five_prime_UTR,downstream 9 LOC_Os04g51980 transferase family domain containing protein, expressed gene transferase family domain containing protein, expressed chr4 30675487 30678244 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g25680 expressed protein gene expressed protein chr2 15023589 15028662 - five_prime_UTR,downstream 9 LOC_Os01g53200 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr1 30560101 30563449 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g27910 oleosin, putative, expressed gene oleosin, putative, expressed chr6 15839816 15841662 + five_prime_UTR 9 LOC_Os11g08265 hypothetical protein gene hypothetical protein chr11 4330362 4330676 + CDS,promoter,downstream 9 LOC_Os04g08600 ZOS4-05 - C2H2 zinc finger protein gene ZOS4-05 - C2H2 zinc finger protein chr4 4670183 4674272 - CDS,promoter 9 LOC_Os04g49194 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed gene naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed chr4 29146429 29153131 + CDS,three_prime_UTR,promoter 9 LOC_Os03g10440 glycosyl hydrolase family 10 protein, putative, expressed gene glycosyl hydrolase family 10 protein, putative, expressed chr3 5316215 5320081 + five_prime_UTR,CDS,promoter 9 LOC_Os12g30970 OsFBX446 - F-box domain containing protein gene OsFBX446 - F-box domain containing protein chr12 18566057 18569096 - CDS 9 LOC_Os08g20440 OsMADS69 - MADS-box family gene with M-alpha type-box, expressed gene OsMADS69 - MADS-box family gene with M-alpha type-box, expressed chr8 12271630 12276713 + CDS,three_prime_UTR,promoter 9 LOC_Os07g06860 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr7 3350133 3351673 - five_prime_UTR,CDS,downstream 9 LOC_Os01g45659 hypothetical protein gene hypothetical protein chr1 25930105 25930686 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g16160 CCT motif family protein gene CCT motif family protein chr12 9227564 9228751 - CDS,promoter,downstream 9 LOC_Os08g34390 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr8 21588289 21589326 - five_prime_UTR,CDS,downstream 9 LOC_Os06g07740 myb-like DNA-binding domain, SHAQKYF class family protein, expressed gene myb-like DNA-binding domain, SHAQKYF class family protein, expressed chr6 3746262 3748227 - CDS,promoter 9 LOC_Os07g14640 hypothetical protein gene hypothetical protein chr7 8349255 8349932 + CDS,promoter,downstream 9 LOC_Os07g06130 ethylene-insensitive protein, putative, expressed gene ethylene-insensitive protein, putative, expressed chr7 2983110 2990140 + CDS,downstream 9 LOC_Os06g30450 hypothetical protein gene hypothetical protein chr6 17592384 17592983 + CDS,downstream 9 LOC_Os06g05380 OsWRKY73 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY73 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr6 2428150 2432255 + CDS,promoter 9 LOC_Os05g12640 BURP domain containing protein, expressed gene BURP domain containing protein, expressed chr5 7255451 7257274 + five_prime_UTR,CDS,promoter 9 LOC_Os11g42080 expressed protein gene expressed protein chr11 24867272 24869467 - CDS,promoter 9 LOC_Os01g05380 expressed protein gene expressed protein chr1 2541013 2541732 - CDS,promoter,downstream 9 LOC_Os05g51240 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr5 29323271 29325509 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g56490 expressed protein gene expressed protein chr4 33491200 33492118 + CDS,three_prime_UTR,downstream 9 LOC_Os06g11840 trehalose phosphatase, putative, expressed gene trehalose phosphatase, putative, expressed chr6 6276594 6280866 - five_prime_UTR,CDS,downstream 9 LOC_Os09g39110 vignain precursor, putative, expressed gene vignain precursor, putative, expressed chr9 22449899 22452785 - CDS,promoter,downstream 9 LOC_Os09g16970 hypothetical protein gene hypothetical protein chr9 10372584 10374583 + CDS,downstream 9 LOC_Os09g07290 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr9 3580289 3585049 - five_prime_UTR,CDS,downstream 9 LOC_Os07g49200 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr7 29457311 29458309 - five_prime_UTR,CDS,downstream 9 LOC_Os04g54090 RALFL18 - Rapid ALkalinization Factor RALF family protein precursor gene RALFL18 - Rapid ALkalinization Factor RALF family protein precursor chr4 32049590 32049914 + CDS,promoter,downstream 9 LOC_Os02g37480 glycine-rich cell wall structural protein precursor, putative, expressed gene glycine-rich cell wall structural protein precursor, putative, expressed chr2 22616510 22617319 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g50900 helix-loop-helix DNA-binding protein, putative gene helix-loop-helix DNA-binding protein, putative chr5 29145974 29148696 - CDS 9 LOC_Os01g07020 POEI39 - Pollen Ole e I allergen and extensin family protein precursor, putative gene POEI39 - Pollen Ole e I allergen and extensin family protein precursor, putative chr1 3305319 3305894 - CDS,downstream 9 LOC_Os06g33460 hypothetical protein gene hypothetical protein chr6 19494981 19495397 - CDS,promoter,downstream 9 LOC_Os06g32970 harpin-induced protein 1 domain containing protein gene harpin-induced protein 1 domain containing protein chr6 19194777 19195493 - CDS,promoter 9 LOC_Os06g04860 hypothetical protein gene hypothetical protein chr6 2135048 2135555 + CDS,promoter,downstream 9 LOC_Os11g12620 receptor protein kinase CLAVATA1 precursor, putative, expressed gene receptor protein kinase CLAVATA1 precursor, putative, expressed chr11 7099829 7106490 + CDS,three_prime_UTR 9 LOC_Os07g30090 actin-depolymerizing factor, putative, expressed gene actin-depolymerizing factor, putative, expressed chr7 17739695 17741322 + CDS 9 LOC_Os07g44380 dirigent, putative, expressed gene dirigent, putative, expressed chr7 26519041 26519696 + five_prime_UTR,CDS,promoter 9 LOC_Os04g03850 OsSub39 - Putative Subtilisin homologue gene OsSub39 - Putative Subtilisin homologue chr4 1732179 1736597 + CDS 9 LOC_Os06g13450 cystathionine beta-lyase, putative, expressed gene cystathionine beta-lyase, putative, expressed chr6 7400128 7403268 + CDS,promoter 9 LOC_Os04g44050 expressed protein gene expressed protein chr4 25912584 25913875 + CDS,downstream 9 LOC_Os10g20430 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 10201625 10206696 - CDS,downstream 9 LOC_Os01g71860 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41628256 41630871 + five_prime_UTR,CDS,promoter 9 LOC_Os01g66490 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr1 38610392 38613014 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g19290 hypothetical protein gene hypothetical protein chr2 11273052 11273980 + CDS,promoter,downstream 9 LOC_Os02g37540 expressed protein gene expressed protein chr2 22645090 22646063 + five_prime_UTR,CDS,promoter 9 LOC_Os06g50240 thaumatin, putative, expressed gene thaumatin, putative, expressed chr6 30419080 30422000 + CDS 9 LOC_Os01g19610 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr1 11108780 11112519 - three_prime_UTR,promoter,downstream 9 LOC_Os08g12230 expressed protein gene expressed protein chr8 7202557 7204853 - five_prime_UTR,downstream 9 LOC_Os10g02040 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr10 654588 657883 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g32040 hypothetical protein gene hypothetical protein chr11 18417293 18417646 - CDS,promoter 9 LOC_Os01g34790 expressed protein gene expressed protein chr1 19199040 19200263 - five_prime_UTR,CDS,downstream 9 LOC_Os08g12250 hypothetical protein gene hypothetical protein chr8 7207187 7207722 - CDS,downstream 9 LOC_Os03g47178 hypothetical protein gene hypothetical protein chr3 26688715 26689102 + CDS,downstream 9 LOC_Os03g51620 DUF221 domain containing protein, expressed gene DUF221 domain containing protein, expressed chr3 29536869 29543160 - five_prime_UTR,CDS,downstream 9 LOC_Os04g49150 OsMADS17 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS17 - MADS-box family gene with MIKCc type-box, expressed chr4 29123109 29128978 + five_prime_UTR,CDS,promoter 9 LOC_Os03g61490 expressed protein gene expressed protein chr3 34870913 34871879 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os05g39990 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr5 23433027 23434993 - CDS 9 LOC_Os02g51689 unknown gene unknown chr2 31662925 31663303 + CDS,promoter,downstream 9 LOC_Os03g24290 hypothetical protein gene hypothetical protein chr3 13827147 13827509 + CDS,promoter,downstream 9 LOC_Os05g44990 light repressible receptor protein kinase, putative, expressed gene light repressible receptor protein kinase, putative, expressed chr5 26090753 26095068 + CDS,promoter,downstream 9 LOC_Os01g28030 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 15671540 15675589 - CDS,three_prime_UTR 9 LOC_Os12g27350 10-deacetylbaccatin III 10-O-acetyltransferase, putative gene 10-deacetylbaccatin III 10-O-acetyltransferase, putative chr12 16075841 16079351 - CDS,promoter 9 LOC_Os04g24510 OsWAK36 - OsWAK receptor-like protein kinase, expressed gene OsWAK36 - OsWAK receptor-like protein kinase, expressed chr4 14047115 14052003 + CDS,promoter 9 LOC_Os12g26940 CHASE domain containing protein, expressed gene CHASE domain containing protein, expressed chr12 15773759 15777221 + three_prime_UTR,downstream 9 LOC_Os11g28410 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 15884318 15894766 + CDS 9 LOC_Os03g46790 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr3 26459273 26460279 + CDS,promoter,downstream 9 LOC_Os02g32320 expressed protein gene expressed protein chr2 19078543 19079992 + five_prime_UTR,CDS,downstream 9 LOC_Os11g33950 conserved hypothetical protein gene conserved hypothetical protein chr11 19370879 19371483 + CDS,downstream 9 LOC_Os02g34970 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr2 20966895 20968222 + three_prime_UTR 9 LOC_Os01g41370 FBD domain containing protein, putative, expressed gene FBD domain containing protein, putative, expressed chr1 23407579 23410129 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g56750 OsFBX65 - F-box domain containing protein, expressed gene OsFBX65 - F-box domain containing protein, expressed chr2 34788376 34790769 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g16590 ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed gene ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B,chloroplast precursor, putative, expressed chr11 9187712 9193224 - CDS 9 LOC_Os11g37290 hypothetical protein gene hypothetical protein chr11 21553224 21555440 - CDS,promoter 9 LOC_Os10g30560 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr10 15822519 15831697 - five_prime_UTR,CDS,downstream 9 LOC_Os03g22170 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr3 12712047 12713302 + CDS,three_prime_UTR,downstream 9 LOC_Os07g34790 conserved hypothetical protein gene conserved hypothetical protein chr7 20848845 20850650 + CDS 9 LOC_Os06g44750 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr6 27024440 27028342 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g11150 gibberellin 2-beta-dioxygenase, putative, expressed gene gibberellin 2-beta-dioxygenase, putative, expressed chr1 5967819 5971489 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g11810 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr4 6467242 6468567 + CDS,promoter 9 LOC_Os04g44280 OsRR5 type-A response regulator, expressed gene OsRR5 type-A response regulator, expressed chr4 26042090 26043309 + CDS,promoter 9 LOC_Os01g07460 conserved hypothetical protein gene conserved hypothetical protein chr1 3535083 3535467 + CDS,promoter,downstream 9 LOC_Os09g08570 expressed protein gene expressed protein chr9 4466902 4467804 + three_prime_UTR,promoter,downstream 9 LOC_Os11g05750 hypothetical protein gene hypothetical protein chr11 2633341 2635005 + CDS,promoter 9 LOC_Os07g30610 cytokinin-O-glucosyltransferase 2, putative, expressed gene cytokinin-O-glucosyltransferase 2, putative, expressed chr7 18112479 18114258 - CDS,three_prime_UTR 9 LOC_Os06g47400 OsFBX204 - F-box domain containing protein gene OsFBX204 - F-box domain containing protein chr6 28722597 28723358 - CDS,downstream 9 LOC_Os10g02880 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr10 1161888 1163461 - CDS,promoter 9 LOC_Os07g18240 lectin-like receptor kinase, putative, expressed gene lectin-like receptor kinase, putative, expressed chr7 10809108 10812197 - CDS 9 LOC_Os04g43519 hypothetical protein gene hypothetical protein chr4 25559795 25563697 + CDS,downstream 9 LOC_Os05g42448 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 24856379 24861241 + CDS 9 LOC_Os01g39110 ZOS1-10 - C2H2 zinc finger protein, expressed gene ZOS1-10 - C2H2 zinc finger protein, expressed chr1 21991827 21996000 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os08g32290 hypothetical protein gene hypothetical protein chr8 20003069 20005176 + CDS,promoter 9 LOC_Os01g46270 wax synthase isoform 3, putative, expressed gene wax synthase isoform 3, putative, expressed chr1 26311024 26312070 + CDS,downstream 9 LOC_Os01g08710 OsWRKY79 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY79 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 4339849 4355468 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os08g38920 caffeoyl-CoA O-methyltransferase, putative, expressed gene caffeoyl-CoA O-methyltransferase, putative, expressed chr8 24595192 24596231 - five_prime_UTR,CDS 9 LOC_Os10g33774 leucoanthocyanidin reductase, putative, expressed gene leucoanthocyanidin reductase, putative, expressed chr10 17802191 17806239 - CDS 9 LOC_Os11g08340 OsGH3.12 - Probable indole-3-acetic acid-amido synthetase gene OsGH3.12 - Probable indole-3-acetic acid-amido synthetase chr11 4397394 4399424 + CDS,promoter 9 LOC_Os07g09190 transketolase, putative, expressed gene transketolase, putative, expressed chr7 4820208 4823668 + CDS,three_prime_UTR 9 LOC_Os09g37680 conserved hypothetical protein gene conserved hypothetical protein chr9 21714187 21715179 - CDS,promoter 9 LOC_Os04g35730 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 21598021 21598713 - CDS,downstream 9 LOC_Os05g06970 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr5 3645847 3648046 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g36300 OsFBX243 - F-box domain containing protein, expressed gene OsFBX243 - F-box domain containing protein, expressed chr7 21706643 21712656 + CDS,promoter 9 LOC_Os01g68460 DC1, putative, expressed gene DC1, putative, expressed chr1 39779740 39782302 - CDS,downstream 9 LOC_Os05g01680 RCLEA7 - Root cap and Late embryogenesis related family protein precursor, expressed gene RCLEA7 - Root cap and Late embryogenesis related family protein precursor, expressed chr5 409468 410669 + CDS,three_prime_UTR,promoter 9 LOC_Os11g45400 glycerol-3-phosphate acyltransferase, putative, expressed gene glycerol-3-phosphate acyltransferase, putative, expressed chr11 27015290 27018656 + five_prime_UTR,CDS,promoter 9 LOC_Os03g24430 cytokinin-O-glucosyltransferase 3, putative gene cytokinin-O-glucosyltransferase 3, putative chr3 13914706 13916223 + CDS,promoter,downstream 9 LOC_Os05g27050 peptide transporter, putative, expressed gene peptide transporter, putative, expressed chr5 15670147 15671728 - CDS,promoter 9 LOC_Os03g08900 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 4605947 4615241 + five_prime_UTR,CDS,promoter 9 LOC_Os10g22570 cellulase, putative, expressed gene cellulase, putative, expressed chr10 11627807 11642373 - CDS,downstream 9 LOC_Os06g48020 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 29034688 29037301 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os09g07350 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed gene fasciclin-like arabinogalactan protein 8 precursor, putative, expressed chr9 3653972 3657804 + CDS 9 LOC_Os08g09410 OsFBX265 - F-box domain containing protein gene OsFBX265 - F-box domain containing protein chr8 5451023 5452777 - CDS 9 LOC_Os08g33940 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr8 21237882 21239682 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g42360 conserved hypothetical protein gene conserved hypothetical protein chr12 26297004 26297426 + CDS,promoter 9 LOC_Os05g42290 conserved hypothetical protein gene conserved hypothetical protein chr5 24672941 24675184 + CDS,promoter 9 LOC_Os02g09290 cytochrome P450 71D10, putative, expressed gene cytochrome P450 71D10, putative, expressed chr2 4785200 4787181 + CDS,three_prime_UTR,downstream 9 LOC_Os01g54470 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 31330264 31332569 + five_prime_UTR,CDS,promoter 9 LOC_Os09g20940 expressed protein gene expressed protein chr9 12605862 12606551 - three_prime_UTR,promoter 9 LOC_Os01g67468 unknown gene unknown chr1 39206067 39206876 - CDS,downstream 9 LOC_Os08g41360 conserved hypothetical protein gene conserved hypothetical protein chr8 26124248 26125216 - CDS,promoter,downstream 9 LOC_Os08g37970 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr8 24048994 24050493 - CDS,promoter,downstream 9 LOC_Os03g36650 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr3 20323336 20324240 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g15500 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr2 8679388 8680781 + CDS,promoter,downstream 9 LOC_Os02g27300 SCP-like extracellular protein gene SCP-like extracellular protein chr2 16076706 16077536 + CDS,promoter 9 LOC_Os07g37080 OsFBX256 - F-box domain containing protein gene OsFBX256 - F-box domain containing protein chr7 22210297 22212156 - CDS 9 LOC_Os11g31690 expressed protein gene expressed protein chr11 18078096 18084213 - five_prime_UTR,downstream 9 LOC_Os03g47440 hypothetical protein gene hypothetical protein chr3 26808741 26809569 - CDS 9 LOC_Os02g34370 expressed protein gene expressed protein chr2 20556665 20559796 + CDS,promoter 9 LOC_Os03g16940 glyoxalase family protein, putative, expressed gene glyoxalase family protein, putative, expressed chr3 9417799 9418768 - CDS,three_prime_UTR,downstream 9 LOC_Os01g12490 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr1 6856032 6859962 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g07040 OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed chr6 3341424 3345319 - five_prime_UTR,CDS,downstream 9 LOC_Os03g17810 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr3 9914874 9916222 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g10440 xylosyltransferase, putative, expressed gene xylosyltransferase, putative, expressed chr1 5506002 5508548 + five_prime_UTR,CDS,promoter 9 LOC_Os01g16560 antifreeze glycoprotein, putative gene antifreeze glycoprotein, putative chr1 9401669 9402698 - CDS,promoter,downstream 9 LOC_Os06g07380 OsFBX188 - F-box domain containing protein gene OsFBX188 - F-box domain containing protein chr6 3546140 3547597 - CDS,downstream 9 LOC_Os01g59720 expressed protein gene expressed protein chr1 34546734 34548310 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g28540 resistance protein LR10, putative gene resistance protein LR10, putative chr8 17424684 17428727 + CDS 9 LOC_Os05g29150 hypothetical protein gene hypothetical protein chr5 17067996 17068912 + CDS,promoter 9 LOC_Os08g36910 alpha-amylase precursor, putative, expressed gene alpha-amylase precursor, putative, expressed chr8 23337963 23340820 + CDS,three_prime_UTR 9 LOC_Os04g37650 xyloglucan fucosyltransferase, putative, expressed gene xyloglucan fucosyltransferase, putative, expressed chr4 22200241 22202590 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g16680 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 9608425 9614381 + CDS,promoter 9 LOC_Os05g24770 reticulon domain containing protein, putative, expressed gene reticulon domain containing protein, putative, expressed chr5 14298623 14302004 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os03g36150 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 20052058 20056419 - CDS,downstream 9 LOC_Os05g35310 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr5 20904063 20906814 + CDS 9 LOC_Os10g34480 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 18318534 18322955 - five_prime_UTR,CDS,downstream 9 LOC_Os01g70870 ZOS1-23 - C2H2 zinc finger protein, expressed gene ZOS1-23 - C2H2 zinc finger protein, expressed chr1 41010263 41014020 - five_prime_UTR,CDS,downstream 9 LOC_Os12g38550 expressed protein gene expressed protein chr12 23636569 23639501 + CDS,three_prime_UTR,promoter 9 LOC_Os05g49010 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr5 28046795 28047667 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os03g60630 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr3 34448405 34449829 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g55734 SSA3 - 2S albumin seed storage family protein precursor gene SSA3 - 2S albumin seed storage family protein precursor chr3 31725392 31725931 - CDS,three_prime_UTR 9 LOC_Os04g51160 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr4 30106333 30107912 - CDS,three_prime_UTR,promoter 9 LOC_Os11g08440 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr11 4439066 4442368 + three_prime_UTR,promoter,downstream 9 LOC_Os05g38410 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr5 22464173 22466149 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g06740 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr6 3157657 3161647 + CDS 9 LOC_Os07g05120 hypothetical protein gene hypothetical protein chr7 2258545 2260557 - CDS,promoter,downstream 9 LOC_Os10g26460 bHLH family protein, putative, expressed gene bHLH family protein, putative, expressed chr10 13702486 13703138 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g20260 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed chr4 11300107 11301738 - CDS,three_prime_UTR,promoter 9 LOC_Os12g39020 BED zinc finger family protein gene BED zinc finger family protein chr12 23966732 23967787 + CDS,downstream 9 LOC_Os09g09460 harpin-induced protein 1 domain containing protein gene harpin-induced protein 1 domain containing protein chr9 5088760 5090228 - CDS,downstream 9 LOC_Os03g30510 conserved hypothetical protein gene conserved hypothetical protein chr3 17402558 17407731 + CDS,promoter 9 LOC_Os11g35550 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr11 20371052 20373354 - CDS,promoter 9 LOC_Os05g05970 ZOS5-04 - C2H2 zinc finger protein gene ZOS5-04 - C2H2 zinc finger protein chr5 2984983 2985366 + CDS,promoter 9 LOC_Os02g56860 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr2 34847918 34849943 + five_prime_UTR,CDS,promoter 9 LOC_Os06g01610 vacuolar-processing enzyme precursor, putative gene vacuolar-processing enzyme precursor, putative chr6 358669 360582 + CDS,promoter,downstream 9 LOC_Os04g02650 expressed protein gene expressed protein chr4 995192 997933 - CDS,promoter,downstream 9 LOC_Os01g21880 expressed protein gene expressed protein chr1 12279120 12279500 - CDS,promoter,downstream 9 LOC_Os03g56100 hypothetical protein gene hypothetical protein chr3 31952488 31955858 + CDS,downstream 9 LOC_Os11g03860 Ser/Thr protein kinase, putative, expressed gene Ser/Thr protein kinase, putative, expressed chr11 1537545 1540255 + five_prime_UTR,CDS,promoter 9 LOC_Os06g45970 OsSAUR26 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR26 - Auxin-responsive SAUR gene family member, expressed chr6 27861250 27861651 + CDS,promoter,downstream 9 LOC_Os03g42630 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr3 23732754 23734738 + CDS,promoter 9 LOC_Os07g17470 hypothetical protein gene hypothetical protein chr7 10311179 10311574 - CDS,downstream 9 LOC_Os04g55980 glycine-rich RNA-binding, abscisic acid-inducible protein, putative gene glycine-rich RNA-binding, abscisic acid-inducible protein, putative chr4 33163054 33163287 - CDS,promoter,downstream 9 LOC_Os05g38680 plant-specific domain TIGR01589 family protein, expressed gene plant-specific domain TIGR01589 family protein, expressed chr5 22615446 22616688 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g46870 hypothetical protein gene hypothetical protein chr3 26505438 26507161 - CDS,promoter 9 LOC_Os12g05690 expressed protein gene expressed protein chr12 2621157 2622107 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os03g52860 lipoxygenase, putative, expressed gene lipoxygenase, putative, expressed chr3 30308494 30312011 + five_prime_UTR,CDS,promoter 9 LOC_Os04g37450 expressed protein gene expressed protein chr4 22128038 22128833 - three_prime_UTR,promoter 9 LOC_Os06g49260 OsWAK65 - OsWAK receptor-like protein kinase gene OsWAK65 - OsWAK receptor-like protein kinase chr6 29849304 29854923 - CDS 9 LOC_Os05g27304 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr5 15808780 15816130 + five_prime_UTR 9 LOC_Os04g49780 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 29491808 29495433 - CDS,promoter 9 LOC_Os02g45100 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed gene mitochondrial import inner membrane translocase subunit Tim17, putative, expressed chr2 27351715 27353791 - CDS,three_prime_UTR 9 LOC_Os06g51210 zinc finger family protein, putative gene zinc finger family protein, putative chr6 30985741 30987363 + CDS,promoter,downstream 9 LOC_Os06g02850 expressed protein gene expressed protein chr6 1045030 1047727 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g16940 OsSub13 - Putative Subtilisin homologue, expressed gene OsSub13 - Putative Subtilisin homologue, expressed chr2 9650579 9656893 - five_prime_UTR,CDS,downstream 9 LOC_Os12g18360 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr12 10603772 10609481 - CDS,three_prime_UTR,promoter 9 LOC_Os01g38520 expressed protein gene expressed protein chr1 21632927 21634409 + CDS,three_prime_UTR,downstream 9 LOC_Os05g03640 flavonol synthase/flavanone 3-hydroxylase, putative, expressed gene flavonol synthase/flavanone 3-hydroxylase, putative, expressed chr5 1561964 1568149 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g29584 OsWAK84 - OsWAK receptor-like protein OsWAK-RLP, expressed gene OsWAK84 - OsWAK receptor-like protein OsWAK-RLP, expressed chr9 17986173 17995612 - five_prime_UTR,downstream 9 LOC_Os04g21544 unknown gene unknown chr4 12168622 12169373 + CDS,promoter,downstream 9 LOC_Os02g16860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 9603935 9608375 - CDS 9 LOC_Os08g28800 Skp1 family, dimerisation domain containing protein gene Skp1 family, dimerisation domain containing protein chr8 17615179 17615688 + CDS,promoter 9 LOC_Os02g37380 expressed protein gene expressed protein chr2 22573291 22574744 - CDS,three_prime_UTR,promoter 9 LOC_Os03g60560 ZOS3-21 - C2H2 zinc finger protein, expressed gene ZOS3-21 - C2H2 zinc finger protein, expressed chr3 34417050 34417974 + CDS,three_prime_UTR,downstream 9 LOC_Os05g44220 hypothetical protein gene hypothetical protein chr5 25664949 25665455 + CDS,promoter,downstream 9 LOC_Os10g14150 ras-related protein, putative gene ras-related protein, putative chr10 7690884 7692857 - CDS,downstream 9 LOC_Os07g14030 SCP-like extracellular protein gene SCP-like extracellular protein chr7 8008332 8008862 - CDS,promoter,downstream 9 LOC_Os09g21810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 13215138 13220757 - CDS 9 LOC_Os07g06300 ethylene-insensitive protein 2, putative, expressed gene ethylene-insensitive protein 2, putative, expressed chr7 3060700 3068674 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g40810 GATA zinc finger domain containing protein, expressed gene GATA zinc finger domain containing protein, expressed chr10 21871767 21873662 + five_prime_UTR,promoter 9 LOC_Os12g12720 jasmonate-induced protein, putative, expressed gene jasmonate-induced protein, putative, expressed chr12 7010135 7011661 + CDS,promoter 9 LOC_Os09g29360 helix-loop-helix DNA-binding protein, putative, expressed gene helix-loop-helix DNA-binding protein, putative, expressed chr9 17825478 17827459 + five_prime_UTR,promoter 9 LOC_Os07g12850 TKL_IRAK_DUF26-lh.7 - DUF26 kinases have homology to DUF26 containing loci gene TKL_IRAK_DUF26-lh.7 - DUF26 kinases have homology to DUF26 containing loci chr7 7362546 7369098 + CDS 9 LOC_Os09g26470 zinc finger, C3HC4 type family protein, expressed gene zinc finger, C3HC4 type family protein, expressed chr9 15990280 15995928 - CDS 9 LOC_Os07g48830 glycosyl transferase 8 domain containing protein, putative, expressed gene glycosyl transferase 8 domain containing protein, putative, expressed chr7 29219291 29220851 - three_prime_UTR,downstream 9 LOC_Os09g15190 conserved hypothetical protein gene conserved hypothetical protein chr9 9219534 9220634 + CDS,promoter,downstream 9 LOC_Os07g34190 chalcone and stilbene synthases, putative, expressed gene chalcone and stilbene synthases, putative, expressed chr7 20454519 20455855 - CDS,promoter,downstream 9 LOC_Os07g38710 hypothetical protein gene hypothetical protein chr7 23232751 23233748 + CDS,downstream 9 LOC_Os05g12040 cytochrome P450 51, putative, expressed gene cytochrome P450 51, putative, expressed chr5 6882605 6884818 - CDS 9 LOC_Os01g60540 OsWRKY20 - Superfamily of TFs having WRKY and zinc finger domains gene OsWRKY20 - Superfamily of TFs having WRKY and zinc finger domains chr1 35007823 35010055 + CDS,promoter,downstream 9 LOC_Os12g11510 hcr2-0B, putative gene hcr2-0B, putative chr12 6230258 6234418 - CDS 9 LOC_Os02g05800 conserved hypothetical protein gene conserved hypothetical protein chr2 2863335 2864534 - CDS,promoter 9 LOC_Os04g04970 hypothetical protein gene hypothetical protein chr4 2403620 2404650 + CDS,promoter 9 LOC_Os05g42150 OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed gene OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed chr5 24580936 24583506 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os10g23310 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr10 12109900 12111942 - CDS,downstream 9 LOC_Os05g38380 expressed protein gene expressed protein chr5 22433825 22434424 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g34630 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 20782531 20783885 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os09g11120 conserved hypothetical protein gene conserved hypothetical protein chr9 6164470 6165262 - CDS,promoter,downstream 9 LOC_Os07g05294 unknown gene unknown chr7 2399235 2399970 + CDS,three_prime_UTR,downstream 9 LOC_Os01g73700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed gene RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed chr1 42698927 42700279 - CDS,three_prime_UTR,downstream 9 LOC_Os06g08450 histidine kinase, putative gene histidine kinase, putative chr6 4141852 4149977 - CDS,downstream 9 LOC_Os02g01355 MADS-box transcription factor, putative, expressed gene MADS-box transcription factor, putative, expressed chr2 199224 204616 + CDS,downstream 9 LOC_Os06g16450 Leucine Rich Repeat family protein, expressed gene Leucine Rich Repeat family protein, expressed chr6 9417322 9422052 - CDS 9 LOC_Os04g46670 ZOS4-09 - C2H2 zinc finger protein, expressed gene ZOS4-09 - C2H2 zinc finger protein, expressed chr4 27480890 27483145 + five_prime_UTR,promoter 9 LOC_Os01g02120 osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osMFT2 MFT-Like2 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr1 611564 614650 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g10690 inorganic phosphate transporter, putative, expressed gene inorganic phosphate transporter, putative, expressed chr4 5806762 5808521 - CDS,downstream 9 LOC_Os11g36890 conserved hypothetical protein gene conserved hypothetical protein chr11 21295108 21297539 - CDS,promoter 9 LOC_Os03g01300 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 207330 210839 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g37850 expressed protein gene expressed protein chr7 22694961 22695717 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g61480 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 35557105 35558182 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g18730 glycosyl hydrolase family 3 protein, putative, expressed gene glycosyl hydrolase family 3 protein, putative, expressed chr11 10604192 10610420 - CDS 9 LOC_Os03g13360 hypothetical protein gene hypothetical protein chr3 7208412 7209038 + CDS,downstream 9 LOC_Os11g41350 MBTB67 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB67 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr11 24343480 24344658 - CDS,promoter 9 LOC_Os09g25700 TsetseEP precursor, putative gene TsetseEP precursor, putative chr9 15421387 15423389 + CDS,downstream 9 LOC_Os09g20740 OsWAK79 - OsWAK receptor-like protein kinase gene OsWAK79 - OsWAK receptor-like protein kinase chr9 12493568 12497571 - CDS 9 LOC_Os01g22352 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 12563257 12569006 + CDS,three_prime_UTR 9 LOC_Os07g03780 lectin-like receptor kinase, putative gene lectin-like receptor kinase, putative chr7 1574322 1577615 - CDS 9 LOC_Os05g29810 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr5 17186605 17187906 + three_prime_UTR,promoter,downstream 9 LOC_Os07g02260 expressed protein gene expressed protein chr7 725606 726559 + CDS,three_prime_UTR 9 LOC_Os02g14430 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr2 7938408 7939841 + five_prime_UTR,CDS,promoter 9 LOC_Os08g07810 strictosidine synthase, putative gene strictosidine synthase, putative chr8 4370025 4371933 + CDS,downstream 9 LOC_Os01g10700 D-mannose binding lectin family protein gene D-mannose binding lectin family protein chr1 5726326 5728756 + CDS,downstream 9 LOC_Os03g19600 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr3 11029554 11031601 + CDS,promoter,downstream 9 LOC_Os10g02250 OsWAK95 - OsWAK receptor-like protein kinase gene OsWAK95 - OsWAK receptor-like protein kinase chr10 791735 798344 - CDS 9 LOC_Os11g06820 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr11 3338876 3340595 - CDS,promoter 9 LOC_Os06g04540 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr6 1961247 1962581 - three_prime_UTR,promoter 9 LOC_Os11g16350 expressed protein gene expressed protein chr11 9016668 9017961 - five_prime_UTR,CDS,downstream 9 LOC_Os11g15130 jasmonate O-methyltransferase, putative, expressed gene jasmonate O-methyltransferase, putative, expressed chr11 8523800 8525953 + CDS,promoter 9 LOC_Os10g31750 hypothetical protein gene hypothetical protein chr10 16572303 16573987 + CDS,downstream 9 LOC_Os02g30700 MYB family transcription factor, putative gene MYB family transcription factor, putative chr2 18284243 18286689 + CDS,promoter,downstream 9 LOC_Os12g13800 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr12 7799543 7803288 - CDS,promoter,downstream 9 LOC_Os08g38360 OsFBX298 - F-box domain containing protein gene OsFBX298 - F-box domain containing protein chr8 24285438 24286239 - CDS,promoter 9 LOC_Os11g16680 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr11 9238978 9242877 - CDS,downstream 9 LOC_Os02g20140 protein kinase domain containing protein gene protein kinase domain containing protein chr2 11862409 11869636 - CDS,downstream 9 LOC_Os12g31550 hypothetical protein gene hypothetical protein chr12 18943639 18949263 - CDS 9 LOC_Os02g16809 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr2 9578456 9579430 + CDS,three_prime_UTR,promoter 9 LOC_Os11g42520 DEFL34 - Defensin and Defensin-like DEFL family gene DEFL34 - Defensin and Defensin-like DEFL family chr11 25142247 25142635 + CDS 9 LOC_Os10g10080 exostosin family domain containing protein, expressed gene exostosin family domain containing protein, expressed chr10 5503545 5506993 - CDS 9 LOC_Os08g36860 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr8 23285900 23291451 - CDS,three_prime_UTR 9 LOC_Os03g43980 AAT1, putative gene AAT1, putative chr3 24694933 24696239 - CDS,downstream 9 LOC_Os02g16770 hypothetical protein gene hypothetical protein chr2 9565901 9568320 + CDS,promoter,downstream 9 LOC_Os07g04270 hypothetical protein gene hypothetical protein chr7 1889849 1890234 + CDS,downstream 9 LOC_Os06g51060 CHIT8 - Chitinase family protein precursor, expressed gene CHIT8 - Chitinase family protein precursor, expressed chr6 30889713 30891068 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g34000 POT family protein, expressed gene POT family protein, expressed chr5 20022543 20025417 + three_prime_UTR 9 LOC_Os05g09060 collagen alpha-2, putative gene collagen alpha-2, putative chr5 5030727 5032386 + CDS,promoter,downstream 9 LOC_Os11g33300 O-methyltransferase, putative gene O-methyltransferase, putative chr11 19228491 19230056 - CDS,promoter,downstream 9 LOC_Os01g40870 aldehyde dehydrogenase, putative, expressed gene aldehyde dehydrogenase, putative, expressed chr1 23112601 23118671 + CDS,promoter 9 LOC_Os06g18820 serine threonine kinase, putative, expressed gene serine threonine kinase, putative, expressed chr6 10684597 10689033 + CDS 9 LOC_Os02g10300 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr2 5411327 5414291 + CDS 9 LOC_Os04g22120 protein kinase, putative, expressed gene protein kinase, putative, expressed chr4 12524854 12530357 - CDS,downstream 9 LOC_Os05g08540 gibberellin 3-beta-dioxygenase 2-2, putative, expressed gene gibberellin 3-beta-dioxygenase 2-2, putative, expressed chr5 4660639 4662566 - CDS,three_prime_UTR 9 LOC_Os02g55290 conserved hypothetical protein gene conserved hypothetical protein chr2 33845428 33847925 - CDS 9 LOC_Os03g03560 FHA domain containing protein, putative, expressed gene FHA domain containing protein, putative, expressed chr3 1551689 1558149 - three_prime_UTR,promoter 9 LOC_Os06g02960 expressed protein gene expressed protein chr6 1089059 1091626 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g08930 expressed protein gene expressed protein chr11 4719780 4721028 - five_prime_UTR,CDS,downstream 9 LOC_Os07g04500 expressed protein gene expressed protein chr7 1984485 1986859 + three_prime_UTR,downstream 9 LOC_Os10g01720 transferase family protein, putative gene transferase family protein, putative chr10 467541 471391 + CDS,promoter 9 LOC_Os02g30940 hypothetical protein gene hypothetical protein chr2 18473317 18475479 - CDS,downstream 9 LOC_Os06g30600 hypothetical protein gene hypothetical protein chr6 17704103 17704785 + CDS,promoter,downstream 9 LOC_Os08g32400 hypothetical protein gene hypothetical protein chr8 20063394 20065797 + CDS,promoter 9 LOC_Os10g38189 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr10 20377571 20378519 - CDS,promoter 9 LOC_Os02g02930 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr2 1145779 1151142 + five_prime_UTR,CDS 9 LOC_Os01g03850 hypothetical protein gene hypothetical protein chr1 1631006 1632033 - CDS,promoter,downstream 9 LOC_Os11g27620 dirigent, putative gene dirigent, putative chr11 15439583 15440140 + CDS,promoter,downstream 9 LOC_Os01g62130 ZOS1-14 - C2H2 zinc finger protein, expressed gene ZOS1-14 - C2H2 zinc finger protein, expressed chr1 35964906 35965903 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g17820 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr8 10924222 10935214 + three_prime_UTR,downstream 9 LOC_Os12g36210 inhibitor I family protein, putative, expressed gene inhibitor I family protein, putative, expressed chr12 22159864 22160429 - five_prime_UTR,CDS,downstream 9 LOC_Os01g10850 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 5788309 5790121 + five_prime_UTR,promoter 9 LOC_Os08g26940 hypothetical protein gene hypothetical protein chr8 16440993 16441615 - CDS,promoter,downstream 9 LOC_Os07g05240 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 2360526 2363396 + CDS,downstream 9 LOC_Os09g19136 conserved hypothetical protein gene conserved hypothetical protein chr9 11416019 11422569 + CDS 9 LOC_Os09g24370 expressed protein gene expressed protein chr9 14478022 14478843 - CDS,three_prime_UTR,promoter 9 LOC_Os02g09190 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 4720932 4722709 - CDS 9 LOC_Os01g12700 MYB family transcription factor, putative gene MYB family transcription factor, putative chr1 7014131 7017379 + CDS,promoter 9 LOC_Os08g09020 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5247669 5248835 + five_prime_UTR,CDS,promoter 9 LOC_Os04g04690 legume lectins beta domain containing protein, putative gene legume lectins beta domain containing protein, putative chr4 2251528 2252231 - CDS,promoter 9 LOC_Os11g45780 RGH2B, putative gene RGH2B, putative chr11 27229457 27230270 - CDS,promoter,downstream 9 LOC_Os01g62600 laccase precursor protein, putative gene laccase precursor protein, putative chr1 36235799 36238023 + CDS,promoter 9 LOC_Os09g29130 ZF-HD protein dimerisation region containing protein, expressed gene ZF-HD protein dimerisation region containing protein, expressed chr9 17702753 17704610 - five_prime_UTR,promoter,downstream 9 LOC_Os11g06050 hypothetical protein gene hypothetical protein chr11 2868808 2871684 - CDS,promoter,downstream 9 LOC_Os06g23114 copper methylamine oxidase precursor, putative, expressed gene copper methylamine oxidase precursor, putative, expressed chr6 13475488 13484210 + five_prime_UTR,CDS,promoter 9 LOC_Os02g21890 expressed protein gene expressed protein chr2 13014464 13015689 + three_prime_UTR,downstream 9 LOC_Os02g42640 CBS domain-containing protein, putative, expressed gene CBS domain-containing protein, putative, expressed chr2 25640756 25642222 + five_prime_UTR,promoter 9 LOC_Os06g05169 unknown gene unknown chr6 2310288 2310656 + CDS,downstream 9 LOC_Os08g04230 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr8 2058654 2060634 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g14520 C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed gene C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed chr1 8131697 8134454 - three_prime_UTR,promoter,downstream 9 LOC_Os05g11320 metallothionein-like protein 3B, putative, expressed gene metallothionein-like protein 3B, putative, expressed chr5 6393819 6396035 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g03050 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr12 1145995 1147742 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g05030 expressed protein gene expressed protein chr5 2449207 2450008 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os05g04500 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr5 2080577 2082742 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g40330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 24183037 24185730 - CDS 9 LOC_Os04g46600 zinc finger protein, putative, expressed gene zinc finger protein, putative, expressed chr4 27442224 27443127 - three_prime_UTR,promoter,downstream 9 LOC_Os08g42360 hypothetical protein gene hypothetical protein chr8 26738218 26739986 - CDS,promoter,downstream 9 LOC_Os01g20010 hypothetical protein gene hypothetical protein chr1 11368569 11368835 - CDS,promoter,downstream 9 LOC_Os01g38710 nucleic acid binding protein, putative gene nucleic acid binding protein, putative chr1 21736596 21737429 + CDS,promoter,downstream 9 LOC_Os01g62310 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr1 36056301 36058591 - CDS,downstream 9 LOC_Os04g29260 hypothetical protein gene hypothetical protein chr4 17173744 17174829 + CDS,promoter 9 LOC_Os02g04924 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr2 2277042 2279841 + three_prime_UTR,downstream 9 LOC_Os09g28390 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 17251027 17254513 - five_prime_UTR,CDS,downstream 9 LOC_Os03g60279 cinnamoyl-CoA reductase family, putative gene cinnamoyl-CoA reductase family, putative chr3 34276812 34281692 + CDS,promoter,downstream 9 LOC_Os06g07650 myb-like DNA-binding domain, SHAQKYF class family protein gene myb-like DNA-binding domain, SHAQKYF class family protein chr6 3701157 3703237 - CDS 9 LOC_Os02g03510 fibroin heavy chain precursor, putative, expressed gene fibroin heavy chain precursor, putative, expressed chr2 1427398 1428132 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os11g05740 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr11 2627611 2629467 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g36700 sucrose transporter BoSUT1, putative, expressed gene sucrose transporter BoSUT1, putative, expressed chr2 22140551 22144278 - CDS 9 LOC_Os01g12890 expressed protein gene expressed protein chr1 7156780 7163385 + five_prime_UTR,promoter 9 LOC_Os04g08824 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 4865371 4867590 + CDS 9 LOC_Os06g40090 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr6 23862464 23863525 - three_prime_UTR,promoter 9 LOC_Os05g10310 acid phosphatase, putative, expressed gene acid phosphatase, putative, expressed chr5 5625651 5632844 - three_prime_UTR,downstream 9 LOC_Os06g45460 OsFBX202 - F-box domain containing protein gene OsFBX202 - F-box domain containing protein chr6 27479085 27480390 - CDS,promoter,downstream 9 LOC_Os03g14630 LTPL106 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL106 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 7945405 7946118 - five_prime_UTR,CDS,downstream 9 LOC_Os07g03770 Homeobox domain containing protein, expressed gene Homeobox domain containing protein, expressed chr7 1565064 1571187 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g14220 STF-1, putative, expressed gene STF-1, putative, expressed chr6 7932985 7934242 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g64850 OsSub10 - Putative Subtilisin homologue gene OsSub10 - Putative Subtilisin homologue chr1 37645976 37648249 + CDS,downstream 9 LOC_Os01g43280 hydroquinone glucosyltransferase, putative, expressed gene hydroquinone glucosyltransferase, putative, expressed chr1 24738048 24740044 + CDS,three_prime_UTR,downstream 9 LOC_Os03g53119 unknown gene unknown chr3 30457072 30457699 + CDS,promoter,downstream 9 LOC_Os07g36530 OsFBX249 - F-box domain containing protein gene OsFBX249 - F-box domain containing protein chr7 21842435 21844745 + CDS 9 LOC_Os02g03480 THION24 - Plant thionin family protein precursor, expressed gene THION24 - Plant thionin family protein precursor, expressed chr2 1416610 1417720 + CDS,three_prime_UTR 9 LOC_Os10g22090 hypothetical protein gene hypothetical protein chr10 11338160 11338531 - CDS 9 LOC_Os06g17000 BURP domain containing protein, expressed gene BURP domain containing protein, expressed chr6 9860877 9862939 - CDS 9 LOC_Os12g05709 F-box domain containing protein gene F-box domain containing protein chr12 2634630 2635889 + CDS,promoter 9 LOC_Os05g28440 hypothetical protein gene hypothetical protein chr5 16590290 16592350 - CDS,promoter 9 LOC_Os07g26150 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr7 15032581 15032808 + CDS,promoter,downstream 9 LOC_Os03g58850 uncharacterized PE-PGRS family protein PE_PGRS3 precursor, putative, expressed gene uncharacterized PE-PGRS family protein PE_PGRS3 precursor, putative, expressed chr3 33505783 33506596 - three_prime_UTR,promoter,downstream 9 LOC_Os12g44110 ligA, putative, expressed gene ligA, putative, expressed chr12 27325824 27327854 - three_prime_UTR,promoter,downstream 9 LOC_Os01g67700 hypothetical protein gene hypothetical protein chr1 39344390 39345043 + CDS,promoter 9 LOC_Os04g39300 heavy metal transport/detoxification protein, putative, expressed gene heavy metal transport/detoxification protein, putative, expressed chr4 23203418 23207063 - CDS,downstream 9 LOC_Os04g43160 expressed protein gene expressed protein chr4 25363238 25365463 - five_prime_UTR,downstream 9 LOC_Os06g23390 IQ calmodulin-binding motif family protein, putative gene IQ calmodulin-binding motif family protein, putative chr6 13648911 13651230 + CDS,promoter 9 LOC_Os03g63890 MYB family transcription factor, putative gene MYB family transcription factor, putative chr3 36093378 36093807 + CDS,promoter 9 LOC_Os01g29840 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr1 16719478 16721591 - five_prime_UTR,CDS,downstream 9 LOC_Os02g47390 expressed protein gene expressed protein chr2 28922837 28926141 - CDS,downstream 9 LOC_Os12g29620 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr12 17662524 17664058 + CDS,promoter,downstream 9 LOC_Os07g05290 expressed protein gene expressed protein chr7 2388669 2389873 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g08350 OsFBX162 - F-box domain containing protein, expressed gene OsFBX162 - F-box domain containing protein, expressed chr5 4551216 4557025 - CDS,promoter 9 LOC_Os06g43350 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 26059869 26064360 + CDS 9 LOC_Os06g02670 hypothetical protein gene hypothetical protein chr6 951808 952278 + CDS,promoter 9 LOC_Os04g21330 hypothetical protein gene hypothetical protein chr4 12030751 12033924 - CDS 9 LOC_Os10g38834 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr10 20600278 20606871 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os01g18584 OsWRKY9 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY9 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 10469516 10477776 + CDS,downstream 9 LOC_Os10g34140 conserved hypothetical protein gene conserved hypothetical protein chr10 18148044 18148775 + CDS,promoter,downstream 9 LOC_Os10g08680 conserved hypothetical protein gene conserved hypothetical protein chr10 4725672 4730518 + CDS,promoter 9 LOC_Os05g04210 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr5 1907897 1909264 - CDS,promoter,downstream 9 LOC_Os01g18400 CHIT10 - Chitinase family protein precursor, expressed gene CHIT10 - Chitinase family protein precursor, expressed chr1 10341001 10342546 - CDS,three_prime_UTR 9 LOC_Os01g45650 OsFBX19 - F-box domain containing protein gene OsFBX19 - F-box domain containing protein chr1 25927546 25928682 - CDS,downstream 9 LOC_Os08g26370 hypothetical protein gene hypothetical protein chr8 16070328 16070988 + CDS,promoter,downstream 9 LOC_Os04g12140 expressed protein gene expressed protein chr4 6678928 6688763 + CDS,promoter 9 LOC_Os08g36000 OsFBL51 - F-box domain and LRR containing protein gene OsFBL51 - F-box domain and LRR containing protein chr8 22685189 22686822 - CDS,promoter 9 LOC_Os02g48580 hypothetical protein gene hypothetical protein chr2 29737433 29738541 + CDS,promoter,downstream 9 LOC_Os06g12450 soluble starch synthase 2-3, chloroplast precursor, putative, expressed gene soluble starch synthase 2-3, chloroplast precursor, putative, expressed chr6 6747359 6752339 + three_prime_UTR,downstream 9 LOC_Os06g40700 OsSub50 - Putative Subtilisin homologue gene OsSub50 - Putative Subtilisin homologue chr6 24257630 24262791 + CDS 9 LOC_Os10g08319 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 4514284 4520205 + five_prime_UTR,CDS,promoter 9 LOC_Os04g39380 heavy metal transport/detoxification protein, putative, expressed gene heavy metal transport/detoxification protein, putative, expressed chr4 23250562 23251358 - five_prime_UTR,CDS,downstream 9 LOC_Os11g46900 wall-associated receptor kinase 3 precursor, putative gene wall-associated receptor kinase 3 precursor, putative chr11 27651760 27656774 + CDS,promoter,downstream 9 LOC_Os06g51010 expressed protein gene expressed protein chr6 30867980 30869037 + five_prime_UTR,CDS,promoter 9 LOC_Os10g36110 LTPL158 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL158 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 19235970 19236636 - five_prime_UTR,downstream 9 LOC_Os10g34702 hypothetical protein gene hypothetical protein chr10 18437249 18438749 - CDS,promoter 9 LOC_Os01g27390 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr1 15290643 15293389 + CDS 9 LOC_Os12g12970 RWP-RK domain-containing protein, putative gene RWP-RK domain-containing protein, putative chr12 7179882 7185552 - CDS 9 LOC_Os09g25220 protein binding protein, putative gene protein binding protein, putative chr9 15110085 15111567 + CDS,downstream 9 LOC_Os12g28880 LTPL110 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL110 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr12 17064719 17065504 + CDS 9 LOC_Os08g44840 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr8 28160256 28162717 - CDS,downstream 9 LOC_Os01g29240 expressed protein gene expressed protein chr1 16391278 16392356 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os10g19300 expressed protein gene expressed protein chr10 9757160 9760553 + CDS 9 LOC_Os02g06770 expressed protein gene expressed protein chr2 3415479 3418460 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g20970 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr1 11712702 11713416 + CDS,downstream 9 LOC_Os02g41450 no apical meristem protein, putative gene no apical meristem protein, putative chr2 24810863 24813949 + CDS,promoter,downstream 9 LOC_Os01g41270 OsFBD3 - F-box and FBD domain containing protein, expressed gene OsFBD3 - F-box and FBD domain containing protein, expressed chr1 23355950 23359151 + CDS,three_prime_UTR,downstream 9 LOC_Os02g33630 WD domain, G-beta repeat domain containing protein gene WD domain, G-beta repeat domain containing protein chr2 20020771 20024193 - CDS,downstream 9 LOC_Os01g27700 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr1 15444432 15446607 + CDS,promoter 9 LOC_Os09g17130 conserved hypothetical protein gene conserved hypothetical protein chr9 10492871 10494993 - CDS,downstream 9 LOC_Os04g38770 OsMADS61 - MADS-box family gene with MIKCc type-box gene OsMADS61 - MADS-box family gene with MIKCc type-box chr4 22855052 22856377 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g03210 hypothetical protein gene hypothetical protein chr6 1208962 1209452 + CDS,promoter,downstream 9 LOC_Os09g17530 OsFBX321 - F-box domain containing protein gene OsFBX321 - F-box domain containing protein chr9 10731282 10732352 - CDS,promoter 9 LOC_Os12g10140 O-methyltransferase, putative gene O-methyltransferase, putative chr12 5363419 5364800 + CDS,promoter 9 LOC_Os05g20930 ZOS5-07 - C2H2 zinc finger protein, expressed gene ZOS5-07 - C2H2 zinc finger protein, expressed chr5 12307988 12309251 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g22880 DEFL8 - Defensin and Defensin-like DEFL family gene DEFL8 - Defensin and Defensin-like DEFL family chr6 13361904 13362250 - CDS,promoter,downstream 9 LOC_Os06g46030 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr6 27903551 27905637 - three_prime_UTR,promoter 9 LOC_Os01g73024 expressed protein gene expressed protein chr1 42368726 42369321 + five_prime_UTR,promoter,downstream 9 LOC_Os12g38900 chorismate mutase, chloroplast precursor, putative, expressed gene chorismate mutase, chloroplast precursor, putative, expressed chr12 23885360 23889821 + five_prime_UTR,CDS,promoter 9 LOC_Os11g31130 hypothetical protein gene hypothetical protein chr11 17654938 17655704 - CDS 9 LOC_Os09g12970 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr9 7469846 7482169 + five_prime_UTR,CDS,promoter 9 LOC_Os12g05620 hypothetical protein gene hypothetical protein chr12 2582896 2585408 - CDS 9 LOC_Os05g36900 dof zinc finger domain containing protein, putative gene dof zinc finger domain containing protein, putative chr5 21492995 21493978 + CDS,promoter 9 LOC_Os12g32850 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 19820277 19823013 - five_prime_UTR,CDS 9 LOC_Os10g07510 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr10 3990764 3992624 - CDS,promoter 9 LOC_Os03g61410 expressed protein gene expressed protein chr3 34844406 34845422 - five_prime_UTR,downstream 9 LOC_Os11g44630 calmodulin binding protein, putative, expressed gene calmodulin binding protein, putative, expressed chr11 26511493 26514091 - CDS,downstream 9 LOC_Os04g09390 HEV3 - Hevein family protein precursor, expressed gene HEV3 - Hevein family protein precursor, expressed chr4 5000516 5001649 - five_prime_UTR,downstream 9 LOC_Os02g51660 trpH, putative, expressed gene trpH, putative, expressed chr2 31630623 31632389 + CDS,downstream 9 LOC_Os05g28040 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr5 16305167 16306493 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g11740 hypothetical protein gene hypothetical protein chr11 6518465 6519100 - CDS,promoter,downstream 9 LOC_Os01g28810 expressed protein gene expressed protein chr1 16134846 16140108 - CDS,three_prime_UTR 9 LOC_Os12g30600 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 18346327 18353859 - CDS,promoter 9 LOC_Os11g11720 serpin domain containing protein, putative gene serpin domain containing protein, putative chr11 6512219 6513571 + CDS,promoter,downstream 9 LOC_Os08g40940 expressed protein gene expressed protein chr8 25906676 25907960 + CDS,three_prime_UTR,promoter 9 LOC_Os06g18930 cadmium tolerance factor, putative gene cadmium tolerance factor, putative chr6 10755375 10758996 + CDS 9 LOC_Os03g30470 CHIT4 - Chitinase family protein precursor, expressed gene CHIT4 - Chitinase family protein precursor, expressed chr3 17389600 17390681 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g24780 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 13940292 13943665 + CDS 9 LOC_Os04g31760 expressed protein gene expressed protein chr4 18832939 18833705 - five_prime_UTR,CDS,downstream 9 LOC_Os03g16610 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr3 9166494 9169270 - CDS,three_prime_UTR 9 LOC_Os06g04090 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr6 1698372 1701860 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g29990 NBS-LRR type disease resistance protein, putative gene NBS-LRR type disease resistance protein, putative chr11 16968113 16972141 - CDS,promoter,downstream 9 LOC_Os01g58960 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 34083713 34085470 + CDS,promoter 9 LOC_Os04g57530 transcription factor, putative, expressed gene transcription factor, putative, expressed chr4 34046082 34048269 - CDS,promoter 9 LOC_Os04g11195 gamma-thionin family domain containing protein gene gamma-thionin family domain containing protein chr4 6091661 6092310 - CDS,promoter 9 LOC_Os12g43380 thaumatin, putative, expressed gene thaumatin, putative, expressed chr12 26879373 26880250 - CDS,three_prime_UTR,downstream 9 LOC_Os06g50440 hypothetical protein gene hypothetical protein chr6 30536134 30537527 + CDS,promoter 9 LOC_Os06g12850 conserved hypothetical protein gene conserved hypothetical protein chr6 7030414 7031805 - CDS,promoter,downstream 9 LOC_Os05g03840 endoglucanase, putative gene endoglucanase, putative chr5 1707157 1709058 - CDS,downstream 9 LOC_Os08g42570 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr8 26902273 26903897 + CDS,three_prime_UTR,downstream 9 LOC_Os01g06070 conserved hypothetical protein gene conserved hypothetical protein chr1 2898038 2898896 - CDS,promoter,downstream 9 LOC_Os06g37710 hypothetical protein gene hypothetical protein chr6 22337043 22337318 + CDS,promoter 9 LOC_Os02g57810 cytochrome P450, putative gene cytochrome P450, putative chr2 35403554 35405149 + CDS,promoter,downstream 9 LOC_Os01g10870 CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr1 5798607 5800142 + CDS,downstream 9 LOC_Os07g11970 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr7 6631572 6634408 - CDS,downstream 9 LOC_Os09g17880 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 10935862 10938399 + CDS 9 LOC_Os07g41240 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr7 24712784 24714819 + three_prime_UTR,promoter,downstream 9 LOC_Os04g06700 conserved hypothetical protein gene conserved hypothetical protein chr4 3525518 3527827 - CDS,downstream 9 LOC_Os03g57010 conserved hypothetical protein gene conserved hypothetical protein chr3 32466641 32467069 + CDS,downstream 9 LOC_Os01g45350 exostosin family protein, putative, expressed gene exostosin family protein, putative, expressed chr1 25744208 25746919 + CDS,promoter 9 LOC_Os02g41954 gibberellin 2-beta-dioxygenase 7, putative, expressed gene gibberellin 2-beta-dioxygenase 7, putative, expressed chr2 25193517 25197873 - CDS,three_prime_UTR,downstream 9 LOC_Os04g17490 hypothetical protein gene hypothetical protein chr4 9558645 9559146 - CDS,promoter,downstream 9 LOC_Os01g38900 TKL_IRAK_DUF26-le.2 - DUF26 kinases have homology to DUF26 containing loci gene TKL_IRAK_DUF26-le.2 - DUF26 kinases have homology to DUF26 containing loci chr1 21836581 21845055 - CDS,downstream 9 LOC_Os02g25070 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 14548326 14549539 + CDS,downstream 9 LOC_Os08g42670 resistance protein, putative, expressed gene resistance protein, putative, expressed chr8 26965828 26975527 - CDS 9 LOC_Os06g50940 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr6 30827273 30829436 - five_prime_UTR,CDS 9 LOC_Os10g03700 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 1659748 1670331 - CDS 9 LOC_Os01g50810 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr1 29182674 29183927 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os07g41840 hypothetical protein gene hypothetical protein chr7 25059929 25060433 - CDS,promoter 9 LOC_Os02g39430 cyclin, putative gene cyclin, putative chr2 23783066 23784268 - CDS,promoter 9 LOC_Os10g31540 glycine-rich cell wall structural protein 2 precursor, putative, expressed gene glycine-rich cell wall structural protein 2 precursor, putative, expressed chr10 16447533 16448431 - five_prime_UTR,downstream 9 LOC_Os11g31780 hypothetical protein gene hypothetical protein chr11 18186470 18188032 - CDS,promoter 9 LOC_Os11g40800 expressed protein gene expressed protein chr11 23948492 23949641 + CDS,three_prime_UTR 9 LOC_Os08g44360 male sterility protein 2, putative, expressed gene male sterility protein 2, putative, expressed chr8 27913599 27919903 + five_prime_UTR,CDS,promoter 9 LOC_Os06g49840 OsMADS16 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS16 - MADS-box family gene with MIKCc type-box, expressed chr6 30172487 30177068 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g09220 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr9 4932507 4941200 + CDS 9 LOC_Os12g04770 expressed protein gene expressed protein chr12 2027537 2029787 + CDS,three_prime_UTR,downstream 9 LOC_Os07g05830 zinc-finger protein, putative, expressed gene zinc-finger protein, putative, expressed chr7 2800929 2803210 - five_prime_UTR,CDS,promoter 9 LOC_Os08g36900 alpha-amylase precursor, putative, expressed gene alpha-amylase precursor, putative, expressed chr8 23332452 23334438 + three_prime_UTR 9 LOC_Os07g41340 B12D protein, putative, expressed gene B12D protein, putative, expressed chr7 24764685 24765720 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g37520 RNA-binding protein FUS, putative gene RNA-binding protein FUS, putative chr2 22639047 22639724 + CDS,promoter,downstream 9 LOC_Os08g02560 DUF1517 domain containing protein, putative gene DUF1517 domain containing protein, putative chr8 1055375 1058733 + CDS 9 LOC_Os01g14900 glycerol-3-phosphate acyltransferase, putative, expressed gene glycerol-3-phosphate acyltransferase, putative, expressed chr1 8346893 8350006 + CDS,three_prime_UTR 9 LOC_Os03g03760 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr3 1671829 1676807 - CDS,downstream 9 LOC_Os09g20720 strictosidine synthase 1 precursor, putative gene strictosidine synthase 1 precursor, putative chr9 12483351 12483830 + CDS,promoter 9 LOC_Os05g49930 GRAS family transcription factor domain containing protein, expressed gene GRAS family transcription factor domain containing protein, expressed chr5 28577617 28579365 + three_prime_UTR,downstream 9 LOC_Os07g06199 hypothetical protein gene hypothetical protein chr7 3024975 3026059 - CDS,promoter 9 LOC_Os06g02760 hypothetical protein gene hypothetical protein chr6 1002544 1005230 - CDS,promoter,downstream 9 LOC_Os01g41280 OsFBD4 - F-box and FBD domain containing protein, expressed gene OsFBD4 - F-box and FBD domain containing protein, expressed chr1 23359582 23361288 + CDS,promoter,downstream 9 LOC_Os07g25380 hypothetical protein gene hypothetical protein chr7 14501986 14502396 - CDS,promoter,downstream 9 LOC_Os11g09610 hypothetical protein gene hypothetical protein chr11 5134661 5135015 - CDS,promoter 9 LOC_Os02g49986 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 30533906 30535244 - CDS,three_prime_UTR,promoter 9 LOC_Os07g10120 expressed protein gene expressed protein chr7 5430554 5435180 + CDS 9 LOC_Os01g19170 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr1 10829021 10830887 + CDS,promoter,downstream 9 LOC_Os10g40440 LTPL140 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL140 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21590915 21591702 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g08120 Os11bglu37 - GH1 pseudogene gene Os11bglu37 - GH1 pseudogene chr11 4258810 4261206 + CDS,promoter 9 LOC_Os06g20290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 11652823 11653706 - CDS,downstream 9 LOC_Os07g25540 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr7 14617210 14619508 - CDS,downstream 9 LOC_Os11g24070 LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL10 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 13204839 13205965 + CDS,three_prime_UTR,promoter 9 LOC_Os05g33410 xylanase inhibitor, putative, expressed gene xylanase inhibitor, putative, expressed chr5 19571947 19573550 + CDS,three_prime_UTR 9 LOC_Os05g27590 wound-induced protein WI12, putative, expressed gene wound-induced protein WI12, putative, expressed chr5 16000821 16001638 - five_prime_UTR,downstream 9 LOC_Os10g01530 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr10 343330 346794 + CDS 9 LOC_Os04g32810 conserved hypothetical protein gene conserved hypothetical protein chr4 19640365 19642367 - CDS,promoter 9 LOC_Os10g39980 expressed protein gene expressed protein chr10 21345770 21348374 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g26840 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr8 16317223 16319443 - five_prime_UTR,CDS 9 LOC_Os10g02000 transferase family protein, putative gene transferase family protein, putative chr10 631134 632276 + CDS,promoter,downstream 9 LOC_Os02g13450 MEGL7 - Maternally expressed gene MEG family protein precursor, putative gene MEGL7 - Maternally expressed gene MEG family protein precursor, putative chr2 7179394 7181309 - CDS,downstream 9 LOC_Os11g46080 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr11 27422621 27429470 + CDS 9 LOC_Os01g66260 expressed protein gene expressed protein chr1 38483425 38484561 - CDS,downstream 9 LOC_Os04g48290 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr4 28587299 28591237 + three_prime_UTR 9 LOC_Os12g05930 conserved hypothetical protein gene conserved hypothetical protein chr12 2731573 2732169 - CDS,downstream 9 LOC_Os07g01370 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 234903 236446 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g02230 cytochrome P450, putative gene cytochrome P450, putative chr2 712586 715746 + CDS,promoter 9 LOC_Os04g42960 Lung seven transmembrane receptor domain containing protein, putative, expressed gene Lung seven transmembrane receptor domain containing protein, putative, expressed chr4 25231923 25233593 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g42240 hypothetical protein gene hypothetical protein chr5 24639800 24641050 - CDS,promoter 9 LOC_Os03g40725 expressed protein gene expressed protein chr3 22657646 22662779 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os05g34450 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr5 20352330 20356007 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g30390 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 15724948 15728657 - CDS,downstream 9 LOC_Os12g43770 OsFBX465 - F-box domain containing protein gene OsFBX465 - F-box domain containing protein chr12 27154482 27155870 + CDS,promoter,downstream 9 LOC_Os06g12410 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr6 6735054 6736804 + CDS 9 LOC_Os07g36900 OsFBL39 - F-box domain and LRR containing protein gene OsFBL39 - F-box domain and LRR containing protein chr7 22094137 22098284 - CDS 9 LOC_Os01g54270 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 31219277 31227522 - CDS,downstream 9 LOC_Os01g42780 cysteine proteinase EP-B 2 precursor, putative gene cysteine proteinase EP-B 2 precursor, putative chr1 24342474 24344129 - five_prime_UTR,CDS,downstream 9 LOC_Os12g18590 conserved hypothetical protein gene conserved hypothetical protein chr12 10737739 10740929 - CDS 9 LOC_Os07g12030 hypothetical protein gene hypothetical protein chr7 6718856 6719344 - CDS,downstream 9 LOC_Os09g18540 conserved hypothetical protein gene conserved hypothetical protein chr9 11362791 11366120 - CDS,promoter 9 LOC_Os01g28170 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr1 15785526 15789878 + CDS,promoter 9 LOC_Os04g26960 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr4 15771473 15776427 + CDS,promoter 9 LOC_Os08g33890 expressed protein gene expressed protein chr8 21205087 21205857 - three_prime_UTR,promoter 9 LOC_Os08g05520 myb-like DNA-binding domain containing protein, putative, expressed gene myb-like DNA-binding domain containing protein, putative, expressed chr8 2947525 2950375 - five_prime_UTR,CDS,downstream 9 LOC_Os01g72470 expressed protein gene expressed protein chr1 42019816 42020421 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os02g29140 ankyrin, putative, expressed gene ankyrin, putative, expressed chr2 17252070 17260196 - three_prime_UTR,promoter,downstream 9 LOC_Os03g54170 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS34 - MADS-box family gene with MIKCc type-box, expressed chr3 31041238 31047906 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g39180 OsWAK73 - OsWAK receptor-like protein kinase gene OsWAK73 - OsWAK receptor-like protein kinase chr8 24747340 24752621 - CDS 9 LOC_Os05g51390 uncharacterized protein PA4923, putative, expressed gene uncharacterized protein PA4923, putative, expressed chr5 29407366 29411609 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g05470 plastocyanin-like domain containing protein, putative gene plastocyanin-like domain containing protein, putative chr12 2505940 2506512 + CDS,promoter,downstream 9 LOC_Os03g07610 conserved hypothetical protein gene conserved hypothetical protein chr3 3871165 3871572 - CDS,downstream 9 LOC_Os01g38120 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr1 21346991 21348629 - CDS,promoter,downstream 9 LOC_Os05g35860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 21210146 21215197 - CDS,promoter,downstream 9 LOC_Os03g52360 PIII3 - Proteinase inhibitor II family protein precursor, putative, expressed gene PIII3 - Proteinase inhibitor II family protein precursor, putative, expressed chr3 30064562 30065410 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g39150 pathogenesis-related Bet v I family protein, putative, expressed gene pathogenesis-related Bet v I family protein, putative, expressed chr4 23093325 23094352 + CDS,promoter 9 LOC_Os04g59020 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr4 34926343 34927394 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os05g09732 acid phosphatase family, putative, expressed gene acid phosphatase family, putative, expressed chr5 5516032 5516325 - CDS,promoter,downstream 9 LOC_Os11g42940 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr11 25420382 25421312 - CDS,three_prime_UTR,downstream 9 LOC_Os06g49660 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr6 30050704 30052357 - CDS,three_prime_UTR 9 LOC_Os03g07650 expressed protein gene expressed protein chr3 3888561 3889303 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g27520 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 15785160 15787257 + CDS,promoter 9 LOC_Os07g02290 OsFBX208 - F-box domain containing protein gene OsFBX208 - F-box domain containing protein chr7 748571 752128 - CDS 9 LOC_Os01g25150 jacalin-like lectin domain containing protein gene jacalin-like lectin domain containing protein chr1 14188467 14191290 - CDS 9 LOC_Os07g28890 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr7 16932770 16937910 + CDS,promoter 9 LOC_Os12g36300 hypothetical protein gene hypothetical protein chr12 22192757 22193038 - CDS,downstream 9 LOC_Os01g39330 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 22136998 22141441 + CDS,three_prime_UTR 9 LOC_Os04g24469 jasmonate-induced protein, putative gene jasmonate-induced protein, putative chr4 14029843 14030729 - CDS,promoter,downstream 9 LOC_Os06g01480 NAC domain containing protein, putative, expressed gene NAC domain containing protein, putative, expressed chr6 288311 293071 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os08g04570 hypothetical protein gene hypothetical protein chr8 2279578 2281602 - CDS 9 LOC_Os02g17060 OsSub15 - Putative Subtilisin homologue gene OsSub15 - Putative Subtilisin homologue chr2 9757893 9762117 - CDS,downstream 9 LOC_Os07g47960 basic helix-loop-helix domain containing protein, expressed gene basic helix-loop-helix domain containing protein, expressed chr7 28648703 28650644 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g16960 hypothetical protein gene hypothetical protein chr9 10367725 10370428 - CDS 9 LOC_Os10g10794 hypothetical protein gene hypothetical protein chr10 5987541 5987768 + CDS,promoter,downstream 9 LOC_Os02g37360 expressed protein gene expressed protein chr2 22566345 22567472 - five_prime_UTR,CDS,downstream 9 LOC_Os02g44136 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 26703760 26711648 - CDS,promoter 9 LOC_Os12g03920 nodulin, putative gene nodulin, putative chr12 1621020 1625198 + CDS,promoter 9 LOC_Os07g34110 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr7 20391409 20394768 - five_prime_UTR,CDS,downstream 9 LOC_Os08g09060 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5259155 5260302 + five_prime_UTR,CDS,promoter 9 LOC_Os03g42350 ankyrin, putative, expressed gene ankyrin, putative, expressed chr3 23554354 23561141 + CDS 9 LOC_Os10g30890 expressed protein gene expressed protein chr10 16038755 16040877 - CDS,three_prime_UTR,promoter 9 LOC_Os02g03180 inhibitor I family protein, putative gene inhibitor I family protein, putative chr2 1259983 1260234 + CDS,promoter 9 LOC_Os02g26670 F-box/Kelch-repeat protein, putative, expressed gene F-box/Kelch-repeat protein, putative, expressed chr2 15653508 15654918 - three_prime_UTR,promoter 9 LOC_Os08g12520 expressed protein gene expressed protein chr8 7409183 7410399 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g54720 expressed protein gene expressed protein chr2 33496562 33499893 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g18780 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 11106990 11112293 + CDS 9 LOC_Os01g52410 myb-like DNA-binding domain containing protein, putative, expressed gene myb-like DNA-binding domain containing protein, putative, expressed chr1 30116069 30117609 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g01960 transferase family protein, putative gene transferase family protein, putative chr8 609522 611123 - CDS,downstream 9 LOC_Os02g06779 expressed protein gene expressed protein chr2 3420170 3423444 - CDS 9 LOC_Os07g40220 expressed protein gene expressed protein chr7 24114640 24115655 + CDS,three_prime_UTR,downstream 9 LOC_Os01g22590 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 12700718 12703546 + CDS,promoter 9 LOC_Os07g46210 LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL2 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 27576344 27577710 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os09g23420 hypothetical protein gene hypothetical protein chr9 13918743 13919868 + CDS 9 LOC_Os11g12790 VQ domain containing protein, putative gene VQ domain containing protein, putative chr11 7239836 7240330 - CDS,downstream 9 LOC_Os05g47620 conserved hypothetical protein gene conserved hypothetical protein chr5 27222784 27223937 + CDS,downstream 9 LOC_Os04g33930 LTPL103 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL103 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr4 20375210 20376521 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g21040 hypothetical protein gene hypothetical protein chr10 10587690 10589011 + CDS,promoter 9 LOC_Os07g36070 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 21564828 21568329 - CDS,promoter 9 LOC_Os11g15370 sulfotransferase domain containing protein gene sulfotransferase domain containing protein chr11 8697004 8699622 - CDS,promoter,downstream 9 LOC_Os10g21080 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr10 10614013 10621875 + CDS 9 LOC_Os03g40390 expressed protein gene expressed protein chr3 22441762 22443610 + CDS 9 LOC_Os09g29690 beta-expansin precursor, putative, expressed gene beta-expansin precursor, putative, expressed chr9 18057252 18058175 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os08g16430 phytochrome P450, putative, expressed gene phytochrome P450, putative, expressed chr8 10050529 10052156 + CDS,promoter 9 LOC_Os03g36260 hypothetical protein gene hypothetical protein chr3 20108420 20109503 + CDS,promoter 9 LOC_Os04g55630 hypothetical protein gene hypothetical protein chr4 32929435 32931563 - CDS 9 LOC_Os01g63180 laccase-6 precursor, putative, expressed gene laccase-6 precursor, putative, expressed chr1 36615758 36620473 + five_prime_UTR 9 LOC_Os01g46860 inorganic phosphate transporter, putative gene inorganic phosphate transporter, putative chr1 26724150 26725909 - CDS,promoter 9 LOC_Os03g56140 homeobox protein rough sheath 1, putative, expressed gene homeobox protein rough sheath 1, putative, expressed chr3 31979579 31984665 + CDS,promoter 9 LOC_Os11g35700 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 20463189 20470978 - CDS,downstream 9 LOC_Os09g17120 ankyrin repeat domain containing protein gene ankyrin repeat domain containing protein chr9 10486855 10488821 - CDS 9 LOC_Os08g07490 hypothetical protein gene hypothetical protein chr8 4205886 4206807 - CDS,downstream 9 LOC_Os01g72500 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 42040083 42041870 + CDS,downstream 9 LOC_Os12g27190 expressed protein gene expressed protein chr12 15954819 15959208 + CDS 9 LOC_Os04g48989 unknown gene unknown chr4 29026457 29026700 + CDS,promoter,downstream 9 LOC_Os11g01030 conserved hypothetical protein gene conserved hypothetical protein chr11 6099 9062 - CDS,downstream 9 LOC_Os10g20890 LTPL137 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL137 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 10516103 10516785 - CDS,three_prime_UTR 9 LOC_Os01g41290 OsFBD5 - F-box and FBD domain containing protein, expressed gene OsFBD5 - F-box and FBD domain containing protein, expressed chr1 23362728 23364954 + CDS,three_prime_UTR,promoter 9 LOC_Os10g05300 conserved hypothetical protein gene conserved hypothetical protein chr10 2618475 2622019 + CDS,promoter 9 LOC_Os07g34880 homeobox domain containing protein gene homeobox domain containing protein chr7 20903220 20904839 + CDS,downstream 9 LOC_Os04g30360 OsWAK58 - OsWAK receptor-like protein kinase gene OsWAK58 - OsWAK receptor-like protein kinase chr4 17944048 17945345 + CDS,promoter,downstream 9 LOC_Os02g58520 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr2 35769161 35771397 + CDS,three_prime_UTR,downstream 9 LOC_Os05g34330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 20272978 20288753 + CDS 9 LOC_Os09g11660 hypothetical protein gene hypothetical protein chr9 6502215 6506182 - CDS,downstream 9 LOC_Os03g47022 homeobox protein rough sheath 1, putative gene homeobox protein rough sheath 1, putative chr3 26578537 26579461 - CDS,promoter 9 LOC_Os04g56460 MBTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed gene MBTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed chr4 33473220 33474281 + CDS,promoter,downstream 9 LOC_Os03g62070 hydrolase, putative, expressed gene hydrolase, putative, expressed chr3 35157576 35161901 + CDS,promoter 9 LOC_Os12g27960 expressed protein gene expressed protein chr12 16483447 16484025 + CDS,promoter 9 LOC_Os01g01980 hypothetical protein gene hypothetical protein chr1 528367 529008 - CDS,downstream 9 LOC_Os01g10470 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr1 5539629 5540520 - three_prime_UTR,promoter,downstream 9 LOC_Os01g09850 ZOS1-04 - C2H2 zinc finger protein, expressed gene ZOS1-04 - C2H2 zinc finger protein, expressed chr1 5098501 5104923 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os06g03120 aspartic proteinase nepenthesin-2 precursor, putative gene aspartic proteinase nepenthesin-2 precursor, putative chr6 1152607 1154129 + CDS,promoter 9 LOC_Os03g58990 cupin domain containing protein gene cupin domain containing protein chr3 33581587 33582276 - CDS,downstream 9 LOC_Os02g07330 expressed protein gene expressed protein chr2 3772296 3776104 + CDS,promoter 9 LOC_Os03g02700 HOTHEAD precursor, putative, expressed gene HOTHEAD precursor, putative, expressed chr3 1007381 1009810 + CDS,three_prime_UTR 9 LOC_Os04g45340 expressed protein gene expressed protein chr4 26619139 26621490 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g12400 conserved hypothetical protein gene conserved hypothetical protein chr11 6918160 6918576 + CDS,promoter 9 LOC_Os02g49630 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr2 30324133 30326791 + CDS 9 LOC_Os06g22990 hypothetical protein gene hypothetical protein chr6 13418088 13422242 + CDS,promoter,downstream 9 LOC_Os01g02790 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr1 975766 979431 + CDS,promoter,downstream 9 LOC_Os01g70890 histone-like transcription factor and archaeal histone, putative, expressed gene histone-like transcription factor and archaeal histone, putative, expressed chr1 41027558 41028982 - three_prime_UTR 9 LOC_Os08g40650 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr8 25732852 25740466 + CDS 9 LOC_Os05g04460 OsWAK56 - OsWAK receptor-like protein kinase gene OsWAK56 - OsWAK receptor-like protein kinase chr5 2053456 2057572 - CDS,promoter,downstream 9 LOC_Os06g41820 SMP-30/Gluconolaconase/LRE-like region containing protein gene SMP-30/Gluconolaconase/LRE-like region containing protein chr6 25079896 25080933 - CDS 9 LOC_Os02g14590 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein chr2 8052103 8053518 + CDS,downstream 9 LOC_Os09g23560 dehydrogenase, putative, expressed gene dehydrogenase, putative, expressed chr9 14000191 14002181 + five_prime_UTR,CDS 9 LOC_Os03g37470 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 20771185 20781168 - CDS 9 LOC_Os07g30150 phosphoribosyl transferase, putative, expressed gene phosphoribosyl transferase, putative, expressed chr7 17786752 17800452 - five_prime_UTR 9 LOC_Os01g73250 abscisic stress-ripening, putative, expressed gene abscisic stress-ripening, putative, expressed chr1 42459511 42461290 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g40510 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21618752 21619566 - five_prime_UTR,CDS,downstream 9 LOC_Os11g06140 serine/threonine-protein kinase WNK4, putative, expressed gene serine/threonine-protein kinase WNK4, putative, expressed chr11 2921499 2925077 - CDS 9 LOC_Os01g72300 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr1 41916656 41918086 + five_prime_UTR,CDS,promoter 9 LOC_Os01g03900 expressed protein gene expressed protein chr1 1669322 1669997 - three_prime_UTR,promoter 9 LOC_Os07g03690 SCP-like extracellular protein gene SCP-like extracellular protein chr7 1499540 1500058 + CDS,promoter,downstream 9 LOC_Os04g47040 anthocyanin regulatory Lc protein, putative, expressed gene anthocyanin regulatory Lc protein, putative, expressed chr4 27696017 27705635 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os11g11730 cell wall adhesin, putative, expressed gene cell wall adhesin, putative, expressed chr11 6515547 6517432 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os05g05370 hypothetical protein gene hypothetical protein chr5 2652025 2656533 - CDS,promoter,downstream 9 LOC_Os01g54170 expressed protein gene expressed protein chr1 31156349 31157181 - CDS,promoter,downstream 9 LOC_Os05g05040 expressed protein gene expressed protein chr5 2452638 2453294 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g39320 expressed protein gene expressed protein chr4 23223231 23225105 - five_prime_UTR,three_prime_UTR,CDS 9 LOC_Os11g03290 nucleoside-triphosphatase, putative, expressed gene nucleoside-triphosphatase, putative, expressed chr11 1221801 1225702 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os12g38340 RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr12 23492977 23493616 + CDS,three_prime_UTR,promoter 9 LOC_Os09g15230 expressed protein gene expressed protein chr9 9244914 9245867 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g45110 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr8 28318502 28319680 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g09210 hypothetical protein gene hypothetical protein chr2 4729991 4730317 + CDS,promoter,downstream 9 LOC_Os03g14615 LTPL117 - Protease inhibitor/seed storage/LTP family protein precursor gene LTPL117 - Protease inhibitor/seed storage/LTP family protein precursor chr3 7937796 7939085 - CDS,promoter,downstream 9 LOC_Os03g46320 hypothetical protein gene hypothetical protein chr3 26195940 26198436 + CDS 9 LOC_Os11g03370 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr11 1268315 1270304 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g06654 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr3 3354037 3359481 + five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g29080 expressed protein gene expressed protein chr6 16578009 16582088 - CDS 9 LOC_Os04g55555 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 32878390 32881082 - five_prime_UTR,downstream 9 LOC_Os06g36480 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr6 21413177 21420993 - five_prime_UTR,CDS,downstream 9 LOC_Os11g02054 ACT domain containing protein, expressed gene ACT domain containing protein, expressed chr11 551471 558407 + five_prime_UTR,CDS,promoter 9 LOC_Os03g25340 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 14479231 14481121 + five_prime_UTR,CDS,promoter 9 LOC_Os11g25700 tropinone reductase, putative, expressed gene tropinone reductase, putative, expressed chr11 14197119 14200277 + CDS,three_prime_UTR 9 LOC_Os10g31250 expressed protein gene expressed protein chr10 16317227 16322201 - CDS,downstream 9 LOC_Os11g24730 receptor-interacting serine/threonine-protein kinase 4, putative gene receptor-interacting serine/threonine-protein kinase 4, putative chr11 13627927 13628730 - CDS,downstream 9 LOC_Os01g22570 glycerol-3-phosphate acyltransferase, putative gene glycerol-3-phosphate acyltransferase, putative chr1 12681307 12682402 - CDS 9 LOC_Os08g07010 ABC-2 type transporter domain containing protein, expressed gene ABC-2 type transporter domain containing protein, expressed chr8 3927465 3932580 + five_prime_UTR,CDS,promoter 9 LOC_Os01g68740 keratin, type I cytoskeletal 9, putative, expressed gene keratin, type I cytoskeletal 9, putative, expressed chr1 39924479 39926224 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g47140 OsWAK123 - OsWAK receptor-like protein kinase, expressed gene OsWAK123 - OsWAK receptor-like protein kinase, expressed chr11 27833767 27839509 + five_prime_UTR,CDS,promoter 9 LOC_Os04g56000 AGAP001055-PA, putative, expressed gene AGAP001055-PA, putative, expressed chr4 33166729 33167349 - CDS,three_prime_UTR 9 LOC_Os01g18810 hypothetical protein gene hypothetical protein chr1 10627367 10629517 - CDS,promoter 9 LOC_Os12g29950 nodulin, putative, expressed gene nodulin, putative, expressed chr12 17872364 17877342 + five_prime_UTR,promoter 9 LOC_Os10g02690 hypothetical protein gene hypothetical protein chr10 1053805 1055606 - CDS,downstream 9 LOC_Os09g16260 expressed protein gene expressed protein chr9 9920532 9925714 - CDS,promoter 9 LOC_Os07g01700 DEFL2 - Defensin and Defensin-like DEFL family, expressed gene DEFL2 - Defensin and Defensin-like DEFL family, expressed chr7 417936 418497 - five_prime_UTR,CDS,downstream 9 LOC_Os01g68730 RNA-binding protein FUS, putative, expressed gene RNA-binding protein FUS, putative, expressed chr1 39921149 39922751 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g47350 beta-D-xylosidase, putative gene beta-D-xylosidase, putative chr11 27960455 27963281 + CDS,downstream 9 LOC_Os01g13600 nmrA-like family domain containing protein gene nmrA-like family domain containing protein chr1 7604362 7605545 - CDS 9 LOC_Os06g33360 RGH1A, putative, expressed gene RGH1A, putative, expressed chr6 19433825 19438090 + five_prime_UTR,CDS,promoter 9 LOC_Os10g10849 hypothetical protein gene hypothetical protein chr10 6020612 6020839 + CDS,promoter,downstream 9 LOC_Os03g22510 expressed protein gene expressed protein chr3 12928655 12929515 - three_prime_UTR,promoter 9 LOC_Os02g52700 alpha-amylase precursor, putative, expressed gene alpha-amylase precursor, putative, expressed chr2 32237277 32239187 + five_prime_UTR,CDS,promoter 9 LOC_Os01g64430 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr1 37395102 37396530 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g43340 conserved hypothetical protein gene conserved hypothetical protein chr11 25688098 25689710 + CDS,downstream 9 LOC_Os08g05080 hypothetical protein gene hypothetical protein chr8 2610210 2611483 - CDS,promoter 9 LOC_Os09g15460 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 9458301 9462945 + CDS 9 LOC_Os06g03830 retinol dehydrogenase, putative, expressed gene retinol dehydrogenase, putative, expressed chr6 1538029 1541213 + CDS 9 LOC_Os04g54020 receptor-like kinase, putative gene receptor-like kinase, putative chr4 32012484 32017613 - CDS,downstream 9 LOC_Os03g47686 ankyrin, putative, expressed gene ankyrin, putative, expressed chr3 27003801 27013905 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g30590 LTPL55 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL55 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr7 18101561 18102722 - five_prime_UTR,CDS,downstream 9 LOC_Os04g30690 NBS type disease resistance protein, putative gene NBS type disease resistance protein, putative chr4 18168912 18172558 + CDS,promoter 9 LOC_Os06g11050 cyclin-dependent kinase inhibitor, putative, expressed gene cyclin-dependent kinase inhibitor, putative, expressed chr6 5790467 5794811 - CDS 9 LOC_Os11g04860 anthocyanin 5-O-glucosyltransferase, putative, expressed gene anthocyanin 5-O-glucosyltransferase, putative, expressed chr11 2063585 2065288 - CDS 9 LOC_Os06g08640 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr6 4300558 4302122 - CDS,three_prime_UTR 9 LOC_Os08g34258 inhibitor I family protein, putative gene inhibitor I family protein, putative chr8 21484853 21485166 + CDS,promoter,downstream 9 LOC_Os08g17784 purple acid phosphatase, putative, expressed gene purple acid phosphatase, putative, expressed chr8 10898784 10908663 + five_prime_UTR,CDS 9 LOC_Os11g14900 thiol protease SEN102 precursor, putative, expressed gene thiol protease SEN102 precursor, putative, expressed chr11 8373952 8376646 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os12g13400 expressed protein gene expressed protein chr12 7493991 7495662 + CDS,three_prime_UTR 9 LOC_Os06g47460 hypothetical protein gene hypothetical protein chr6 28741941 28746114 + CDS,promoter,downstream 9 LOC_Os10g42340 hypothetical protein gene hypothetical protein chr10 22717410 22721798 - CDS 9 LOC_Os06g09760 AP2 domain containing protein gene AP2 domain containing protein chr6 4971238 4971774 + CDS,promoter 9 LOC_Os07g07300 expressed protein gene expressed protein chr7 3619110 3629821 - five_prime_UTR,CDS 9 LOC_Os10g36420 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr10 19399616 19403954 - CDS,downstream 9 LOC_Os02g32040 AP2 domain containing protein gene AP2 domain containing protein chr2 18917753 18918472 - CDS,promoter,downstream 9 LOC_Os09g39410 male sterility protein, putative, expressed gene male sterility protein, putative, expressed chr9 22660244 22664937 + five_prime_UTR,CDS,promoter 9 LOC_Os03g37770 hypothetical protein gene hypothetical protein chr3 20938391 20938966 + CDS,promoter,downstream 9 LOC_Os01g39220 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr1 22063276 22063695 + CDS,promoter,downstream 9 LOC_Os03g61650 hypothetical protein gene hypothetical protein chr3 34938711 34939805 + CDS,promoter,downstream 9 LOC_Os04g13040 OsFBX124 - F-box domain containing protein gene OsFBX124 - F-box domain containing protein chr4 7185539 7186441 + CDS 9 LOC_Os09g32948 OsMADS8 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS8 - MADS-box family gene with MIKCc type-box, expressed chr9 19652979 19659356 + CDS,three_prime_UTR,promoter 9 LOC_Os12g43660 receptor-like protein kinase HAIKU2 precursor, putative, expressed gene receptor-like protein kinase HAIKU2 precursor, putative, expressed chr12 27088885 27092651 + CDS,three_prime_UTR 9 LOC_Os11g18839 unknown gene unknown chr11 10696952 10697062 + CDS,promoter 9 LOC_Os12g27254 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr12 15995568 16002777 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g38290 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 23146820 23149029 - three_prime_UTR,CDS,downstream 9 LOC_Os02g45850 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr2 27926962 27928820 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os04g32790 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr4 19618461 19619872 + three_prime_UTR,promoter 9 LOC_Os03g19180 GCRP8 - Glycine and cysteine rich family protein precursor, putative gene GCRP8 - Glycine and cysteine rich family protein precursor, putative chr3 10749059 10750002 - CDS,promoter,downstream 9 LOC_Os06g32910 uncharacterized Cys-rich domain containing protein, putative gene uncharacterized Cys-rich domain containing protein, putative chr6 19156241 19157750 - CDS,promoter 9 LOC_Os05g41840 conserved hypothetical protein gene conserved hypothetical protein chr5 24441875 24442498 - CDS,promoter 9 LOC_Os06g15020 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr6 8510315 8512068 + three_prime_UTR 9 LOC_Os09g39050 OsFBX342 - F-box domain containing protein, expressed gene OsFBX342 - F-box domain containing protein, expressed chr9 22418163 22419612 - CDS,downstream 9 LOC_Os03g45210 2-aminoethanethiol dioxygenase, putative, expressed gene 2-aminoethanethiol dioxygenase, putative, expressed chr3 25524770 25528811 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g24980 hypothetical protein gene hypothetical protein chr11 13760314 13760682 - CDS 9 LOC_Os11g25420 hypothetical protein gene hypothetical protein chr11 14029322 14029964 - CDS,promoter 9 LOC_Os06g13940 expressed protein gene expressed protein chr6 7762144 7762950 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g19520 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 11667111 11672509 + CDS 9 LOC_Os08g03330 hypothetical protein gene hypothetical protein chr8 1543253 1544488 - CDS,downstream 9 LOC_Os05g12670 expressed protein gene expressed protein chr5 7271633 7272520 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g30714 dehydrogenase/reductase, putative, expressed gene dehydrogenase/reductase, putative, expressed chr2 18290383 18304266 + CDS 9 LOC_Os11g05780 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr11 2661118 2662433 - five_prime_UTR,downstream 9 LOC_Os06g05480 expressed protein gene expressed protein chr6 2476493 2477407 - three_prime_UTR,promoter 9 LOC_Os01g61610 flavonol synthase/flavanone 3-hydroxylase, putative, expressed gene flavonol synthase/flavanone 3-hydroxylase, putative, expressed chr1 35635260 35640193 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g38990 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 23947305 23948240 + CDS,promoter 9 LOC_Os07g03820 lectin-like receptor kinase, putative, expressed gene lectin-like receptor kinase, putative, expressed chr7 1594360 1596614 - CDS 9 LOC_Os02g18990 GDSL-like lipase/acylhydrolase, putative gene GDSL-like lipase/acylhydrolase, putative chr2 11093807 11097790 + CDS,promoter,downstream 9 LOC_Os03g45740 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr3 25830059 25831838 + CDS,promoter 9 LOC_Os07g04560 no apical meristem protein, putative gene no apical meristem protein, putative chr7 2022159 2024062 + CDS,promoter 9 LOC_Os06g23710 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 13853886 13859640 - CDS 9 LOC_Os02g43030 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr2 25904070 25905040 - five_prime_UTR,downstream 9 LOC_Os01g10520 expressed protein gene expressed protein chr1 5577753 5584267 - CDS,three_prime_UTR 9 LOC_Os11g13390 hypothetical protein gene hypothetical protein chr11 7327582 7328286 - CDS,downstream 9 LOC_Os02g17200 hypothetical protein gene hypothetical protein chr2 9853307 9854419 - CDS,downstream 9 LOC_Os03g61419 hypothetical protein gene hypothetical protein chr3 34846103 34847164 + CDS,promoter 9 LOC_Os08g07270 glycosyltransferase, putative gene glycosyltransferase, putative chr8 4056597 4058114 - CDS,promoter 9 LOC_Os10g03490 conserved hypothetical protein gene conserved hypothetical protein chr10 1500256 1503645 - CDS,promoter 9 LOC_Os09g20700 strictosidine synthase, putative gene strictosidine synthase, putative chr9 12465522 12466997 + CDS,promoter 9 LOC_Os02g30850 OsGrx_C8 - glutaredoxin subgroup III, expressed gene OsGrx_C8 - glutaredoxin subgroup III, expressed chr2 18408428 18409492 + three_prime_UTR,downstream 9 LOC_Os10g40470 LTPL142 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL142 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr10 21598988 21599722 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os12g23830 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 13545598 13550560 + CDS,promoter 9 LOC_Os01g40290 expressed protein gene expressed protein chr1 22746292 22747099 + three_prime_UTR 9 LOC_Os12g08090 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr12 4119914 4122046 + five_prime_UTR,promoter 9 LOC_Os01g07480 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr1 3550044 3552146 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g39060 hypothetical protein gene hypothetical protein chr7 23414592 23415893 - CDS,promoter 9 LOC_Os06g44860 OsSPL10 - SBP-box gene family member, expressed gene OsSPL10 - SBP-box gene family member, expressed chr6 27113989 27116420 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g28780 MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB35 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr10 14939432 14941090 - CDS 9 LOC_Os04g04770 legume lectins beta domain containing protein, putative, expressed gene legume lectins beta domain containing protein, putative, expressed chr4 2287615 2288528 + five_prime_UTR,CDS,promoter 9 LOC_Os04g31540 OsFBX130 - F-box domain containing protein gene OsFBX130 - F-box domain containing protein chr4 18690074 18691366 + CDS,promoter,downstream 9 LOC_Os03g18250 hypothetical protein gene hypothetical protein chr3 10229528 10230273 - CDS 9 LOC_Os10g32590 universal stress protein domain containing protein, putative, expressed gene universal stress protein domain containing protein, putative, expressed chr10 17002922 17004068 + CDS,three_prime_UTR,downstream 9 LOC_Os12g26390 expressed protein gene expressed protein chr12 15418872 15421109 - CDS,downstream 9 LOC_Os01g33550 MEGL19 - Maternally expressed gene MEG family protein precursor, putative gene MEGL19 - Maternally expressed gene MEG family protein precursor, putative chr1 18463261 18463787 + CDS,downstream 9 LOC_Os08g39330 skin secretory protein xP2 precursor, putative, expressed gene skin secretory protein xP2 precursor, putative, expressed chr8 24851571 24853043 + five_prime_UTR,CDS,promoter 9 LOC_Os07g46000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 27447997 27450172 + CDS,promoter 9 LOC_Os09g28510 EF hand family protein, putative, expressed gene EF hand family protein, putative, expressed chr9 17337478 17338174 + three_prime_UTR,downstream 9 LOC_Os11g42950 expressed protein gene expressed protein chr11 25424436 25425109 - five_prime_UTR,CDS,downstream 9 LOC_Os09g18159 light repressible receptor protein kinase, putative, expressed gene light repressible receptor protein kinase, putative, expressed chr9 11122331 11142797 - five_prime_UTR,CDS 9 LOC_Os04g28620 male sterility protein, putative, expressed gene male sterility protein, putative, expressed chr4 16773247 16779638 + CDS 9 LOC_Os01g06630 small hydrophilic plant seed protein, putative, expressed gene small hydrophilic plant seed protein, putative, expressed chr1 3123351 3124325 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g21060 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr3 11972688 11975144 - CDS,three_prime_UTR 9 LOC_Os11g07000 hypothetical protein gene hypothetical protein chr11 3478324 3479769 + CDS,promoter,downstream 9 LOC_Os09g01310 hypothetical protein gene hypothetical protein chr9 258697 259752 - CDS,promoter 9 LOC_Os06g13880 expressed protein gene expressed protein chr6 7721725 7722355 - five_prime_UTR,CDS,downstream 9 LOC_Os09g09560 conserved hypothetical protein gene conserved hypothetical protein chr9 5158460 5160957 + CDS,promoter 9 LOC_Os04g54550 AT5MAT, putative, expressed gene AT5MAT, putative, expressed chr4 32260290 32260820 - CDS,downstream 9 LOC_Os05g35000 conserved hypothetical protein gene conserved hypothetical protein chr5 20727786 20729578 - CDS 9 LOC_Os08g04190 homeobox and START domains containing protein, putative, expressed gene homeobox and START domains containing protein, putative, expressed chr8 2033457 2036507 - CDS,downstream 9 LOC_Os01g68370 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr1 39722112 39725945 - CDS,three_prime_UTR,promoter 9 LOC_Os07g44250 dirigent, putative, expressed gene dirigent, putative, expressed chr7 26444638 26445529 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g37690 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr12 23101516 23103812 - five_prime_UTR,CDS,downstream 9 LOC_Os03g46110 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 26071660 26074641 - CDS,three_prime_UTR,promoter 9 LOC_Os02g44200 thioesterase family protein, putative gene thioesterase family protein, putative chr2 26749058 26751276 - CDS,promoter,downstream 9 LOC_Os01g47670 expressed protein gene expressed protein chr1 27268123 27269331 - CDS,promoter 9 LOC_Os11g32780 expressed protein gene expressed protein chr11 18896230 18899844 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os08g31610 hypothetical protein gene hypothetical protein chr8 19556397 19557761 + CDS,downstream 9 LOC_Os10g26340 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 13587559 13589312 - CDS,promoter 9 LOC_Os01g36240 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 20060916 20065485 + CDS 9 LOC_Os02g45450 dehydration-responsive element-binding protein, putative, expressed gene dehydration-responsive element-binding protein, putative, expressed chr2 27647066 27648337 + three_prime_UTR,downstream 9 LOC_Os01g13130 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr1 7301368 7302788 + five_prime_UTR,CDS,promoter 9 LOC_Os10g34130 nodulin, putative gene nodulin, putative chr10 18143113 18146332 - CDS,promoter,downstream 9 LOC_Os06g08680 expressed protein gene expressed protein chr6 4328667 4329599 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g17100 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 9910973 9915273 - CDS 9 LOC_Os07g34180 hypothetical protein gene hypothetical protein chr7 20451905 20452222 + CDS,promoter,downstream 9 LOC_Os02g29120 hypothetical protein gene hypothetical protein chr2 17238521 17238862 + CDS,promoter,downstream 9 LOC_Os08g15780 DC1 domain, putative gene DC1 domain, putative chr8 9558749 9559447 - CDS,promoter,downstream 9 LOC_Os03g15440 basic helix-loop-helix, putative, expressed gene basic helix-loop-helix, putative, expressed chr3 8457069 8460020 + CDS,three_prime_UTR,promoter 9 LOC_Os07g39640 LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL64 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 23763809 23764816 - five_prime_UTR,CDS,downstream 9 LOC_Os12g32900 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr12 19851101 19852384 - CDS 9 LOC_Os07g48980 nicotianamine synthase, putative, expressed gene nicotianamine synthase, putative, expressed chr7 29322102 29323731 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g10760 hypothetical protein gene hypothetical protein chr1 5749703 5750035 - CDS,promoter,downstream 9 LOC_Os01g19020 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 10747579 10749210 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os09g24480 TCP family transcription factor, putative gene TCP family transcription factor, putative chr9 14566291 14567869 + CDS,promoter 9 LOC_Os08g01580 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr8 341215 345733 + CDS 9 LOC_Os07g08800 hypothetical protein gene hypothetical protein chr7 4539865 4540107 + CDS,promoter,downstream 9 LOC_Os01g57854 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr1 33452389 33459043 + five_prime_UTR,promoter 9 LOC_Os09g17570 hypothetical protein gene hypothetical protein chr9 10745002 10746187 - CDS,downstream 9 LOC_Os08g03470 MBTB15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed gene MBTB15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed chr8 1627506 1630175 + CDS,three_prime_UTR,promoter 9 LOC_Os11g23930 expressed protein gene expressed protein chr11 13096257 13097268 + five_prime_UTR,CDS,promoter 9 LOC_Os04g47250 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 27876176 27878518 - five_prime_UTR,downstream 9 LOC_Os03g47210 expressed protein gene expressed protein chr3 26715074 26715694 - three_prime_UTR,promoter 9 LOC_Os09g03470 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 1706196 1710782 + CDS,downstream 9 LOC_Os03g62200 ammonium transporter protein, putative, expressed gene ammonium transporter protein, putative, expressed chr3 35231124 35234845 + five_prime_UTR,CDS,promoter 9 LOC_Os12g24130 hypothetical protein gene hypothetical protein chr12 13732364 13735966 + CDS,downstream 9 LOC_Os05g51680 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr5 29572276 29575637 - five_prime_UTR,downstream 9 LOC_Os01g14530 AWPM-19-like membrane family protein, putative, expressed gene AWPM-19-like membrane family protein, putative, expressed chr1 8145428 8147059 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g19550 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed gene oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed chr6 11131744 11133651 - CDS,three_prime_UTR,downstream 9 LOC_Os12g05020 jasmonate-induced protein, putative gene jasmonate-induced protein, putative chr12 2178172 2179893 + CDS 9 LOC_Os11g35930 chalcone synthase, putative, expressed gene chalcone synthase, putative, expressed chr11 20636673 20638465 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g35710 cycloartenol synthase, putative, expressed gene cycloartenol synthase, putative, expressed chr11 20476318 20493605 + CDS 9 LOC_Os05g39720 OsWRKY70 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY70 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr5 23247895 23250870 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g43000 cysteine-rich repeat secretory protein 15 precursor, putative, expressed gene cysteine-rich repeat secretory protein 15 precursor, putative, expressed chr2 25879153 25880901 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os11g31040 hypothetical protein gene hypothetical protein chr11 17589562 17590436 - CDS,promoter,downstream 9 LOC_Os10g38000 dehydration-responsive element-binding protein, putative gene dehydration-responsive element-binding protein, putative chr10 20283556 20284137 + CDS,promoter,downstream 9 LOC_Os01g11510 OsMADS91 - MADS-box family gene with M-beta type-box gene OsMADS91 - MADS-box family gene with M-beta type-box chr1 6190931 6192745 + CDS,promoter 9 LOC_Os01g08740 hypothetical protein gene hypothetical protein chr1 4367738 4368265 - CDS,promoter,downstream 9 LOC_Os04g23940 chalcone synthase, putative gene chalcone synthase, putative chr4 13680696 13682076 - CDS,promoter,downstream 9 LOC_Os07g34040 harpin-induced protein 1 domain containing protein, expressed gene harpin-induced protein 1 domain containing protein, expressed chr7 20347676 20348538 + five_prime_UTR,CDS,promoter 9 LOC_Os08g31080 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr8 19188077 19189686 + CDS,promoter 9 LOC_Os03g13200 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 7123841 7126283 - five_prime_UTR,CDS,downstream 9 LOC_Os01g14510 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed gene BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed chr1 8124667 8127193 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g28177 ATPase 3, putative, expressed gene ATPase 3, putative, expressed chr12 16634757 16636648 + three_prime_UTR 9 LOC_Os01g28474 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr1 15947750 15952072 + CDS 9 LOC_Os03g54190 hypothetical protein gene hypothetical protein chr3 31056990 31058704 - CDS,promoter 9 LOC_Os03g60976 conserved hypothetical protein gene conserved hypothetical protein chr3 34631889 34637512 - CDS,promoter 9 LOC_Os03g48870 expressed protein gene expressed protein chr3 27829432 27830384 + CDS,three_prime_UTR,downstream 9 LOC_Os07g01680 dirigent, putative gene dirigent, putative chr7 411927 412589 - CDS,promoter 9 LOC_Os12g31620 disease resistance protein RPM1, putative, expressed gene disease resistance protein RPM1, putative, expressed chr12 19015194 19020019 - CDS 9 LOC_Os11g28550 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 16003313 16006216 - CDS,promoter 9 LOC_Os06g33990 hypothetical protein gene hypothetical protein chr6 19794311 19795809 + CDS,downstream 9 LOC_Os08g34330 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed gene SMP-30/Gluconolaconase/LRE-like region containing protein, expressed chr8 21546863 21548614 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g26760 dehydrin, putative, expressed gene dehydrin, putative, expressed chr11 14864082 14864971 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g38840 TKL_IRAK_DUF26-le.1 - DUF26 kinases have homology to DUF26 containing loci gene TKL_IRAK_DUF26-le.1 - DUF26 kinases have homology to DUF26 containing loci chr1 21787842 21789881 - CDS,promoter 9 LOC_Os03g20350 conserved hypothetical protein gene conserved hypothetical protein chr3 11516641 11518065 + CDS,promoter,downstream 9 LOC_Os10g21190 expressed protein gene expressed protein chr10 10717815 10719924 + CDS,promoter 9 LOC_Os01g03429 conserved hypothetical protein gene conserved hypothetical protein chr1 1378691 1381143 + CDS,promoter 9 LOC_Os07g12100 expressed protein gene expressed protein chr7 6747533 6754444 - CDS,three_prime_UTR,promoter 9 LOC_Os09g17080 OsFBX318 - F-box domain containing protein gene OsFBX318 - F-box domain containing protein chr9 10462222 10463181 + CDS,promoter 9 LOC_Os05g45480 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr5 26314560 26316079 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os04g23230 hypothetical protein gene hypothetical protein chr4 13236252 13237134 + CDS,promoter,downstream 9 LOC_Os02g30670 hypothetical protein gene hypothetical protein chr2 18271782 18272532 + CDS,promoter 9 LOC_Os07g44280 dirigent, putative, expressed gene dirigent, putative, expressed chr7 26455727 26456627 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g56510 phosphate transporter 1, putative, expressed gene phosphate transporter 1, putative, expressed chr2 34603539 34609797 + five_prime_UTR,CDS,promoter 9 LOC_Os10g30840 AP2 domain containing protein gene AP2 domain containing protein chr10 15992622 15992996 - CDS,promoter,downstream 9 LOC_Os02g49410 histone-like transcription factor and archaeal histone, putative, expressed gene histone-like transcription factor and archaeal histone, putative, expressed chr2 30185602 30186620 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g38340 ZOS9-17 - C2H2 zinc finger protein, expressed gene ZOS9-17 - C2H2 zinc finger protein, expressed chr9 22063973 22070270 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g25490 aminotransferase, classes I and II, domain containing protein gene aminotransferase, classes I and II, domain containing protein chr5 14764447 14767020 - CDS,downstream 9 LOC_Os12g04140 CXE carboxylesterase, putative gene CXE carboxylesterase, putative chr12 1738759 1739846 + CDS,downstream 9 LOC_Os01g58270 OsSub7 - Putative Subtilisin homologue gene OsSub7 - Putative Subtilisin homologue chr1 33673361 33678673 + CDS 9 LOC_Os08g02160 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr8 731023 733595 + five_prime_UTR,CDS,promoter 9 LOC_Os04g41680 CHIT3 - Chitinase family protein precursor, expressed gene CHIT3 - Chitinase family protein precursor, expressed chr4 24523578 24524772 - CDS,downstream 9 LOC_Os02g37610 expressed protein gene expressed protein chr2 22690673 22691925 - five_prime_UTR,downstream 9 LOC_Os02g53100 OsWRKY32 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY32 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr2 32483148 32489201 + CDS,promoter 9 LOC_Os12g05680 transcription factor, putative, expressed gene transcription factor, putative, expressed chr12 2604717 2611492 - five_prime_UTR,downstream 9 LOC_Os08g18980 hypothetical protein gene hypothetical protein chr8 11326546 11327335 + CDS,promoter 9 LOC_Os07g28170 hypothetical protein gene hypothetical protein chr7 16446104 16449577 + CDS,downstream 9 LOC_Os09g23460 hypothetical protein gene hypothetical protein chr9 13944037 13945492 + CDS,promoter 9 LOC_Os09g12400 hypothetical protein gene hypothetical protein chr9 7093058 7093822 - CDS,promoter 9 LOC_Os07g45560 conserved hypothetical protein gene conserved hypothetical protein chr7 27177892 27188690 + CDS,promoter 9 LOC_Os11g43220 hypothetical protein gene hypothetical protein chr11 25602548 25603164 + CDS,promoter,downstream 9 LOC_Os07g02420 hypothetical protein gene hypothetical protein chr7 830697 832034 - CDS,promoter,downstream 9 LOC_Os12g26960 THION34 - Plant thionin family protein precursor, expressed gene THION34 - Plant thionin family protein precursor, expressed chr12 15785858 15786460 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g55360 hypothetical protein gene hypothetical protein chr2 33903146 33903442 + CDS,promoter,downstream 9 LOC_Os02g48490 hypothetical protein gene hypothetical protein chr2 29679419 29680342 - CDS,promoter 9 LOC_Os02g44830 hypothetical protein gene hypothetical protein chr2 27147320 27148582 - CDS,promoter,downstream 9 LOC_Os02g37260 hypothetical protein gene hypothetical protein chr2 22523516 22525454 - CDS,promoter,downstream 9 LOC_Os11g05190 phytosulfokines precursor, putative, expressed gene phytosulfokines precursor, putative, expressed chr11 2287182 2288458 + three_prime_UTR,downstream 9 LOC_Os04g50690 hypothetical protein gene hypothetical protein chr4 29812894 29813626 - CDS,promoter 9 LOC_Os04g34490 nodulin, putative, expressed gene nodulin, putative, expressed chr4 20710320 20713663 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g36000 zinc finger protein, putative gene zinc finger protein, putative chr2 21619153 21619856 + CDS,promoter 9 LOC_Os08g40130 heavy metal-associated domain containing protein gene heavy metal-associated domain containing protein chr8 25396551 25397696 + CDS,promoter,downstream 9 LOC_Os11g18340 cycloartenol synthase, putative gene cycloartenol synthase, putative chr11 10336844 10337065 - CDS,promoter,downstream 9 LOC_Os06g45610 expressed protein gene expressed protein chr6 27613008 27613832 + five_prime_UTR,promoter,downstream 9 LOC_Os04g36670 expressed protein gene expressed protein chr4 21972179 21974127 + five_prime_UTR,promoter 9 LOC_Os12g17930 hypothetical protein gene hypothetical protein chr12 10299624 10303523 - CDS,downstream 9 LOC_Os06g03070 hypothetical protein gene hypothetical protein chr6 1131268 1131867 + CDS,downstream 9 LOC_Os03g07830 AP2 domain containing protein gene AP2 domain containing protein chr3 3983896 3984852 + CDS,downstream 9 LOC_Os01g72579 unknown gene unknown chr1 42101833 42102214 + CDS,promoter 9 LOC_Os02g10350 MLO domain containing protein, putative, expressed gene MLO domain containing protein, putative, expressed chr2 5442079 5447380 + CDS,three_prime_UTR,downstream 9 LOC_Os05g44940 protein kinase domain containing protein gene protein kinase domain containing protein chr5 26057783 26064355 + CDS,promoter 9 LOC_Os05g02700 expressed protein gene expressed protein chr5 958468 959924 - CDS,promoter 9 LOC_Os02g17690 hypothetical protein gene hypothetical protein chr2 10197327 10199936 + CDS,downstream 9 LOC_Os05g35760 serine/threonine-protein kinase SAPK4, putative gene serine/threonine-protein kinase SAPK4, putative chr5 21162287 21164168 - CDS,promoter 9 LOC_Os09g29160 expressed protein gene expressed protein chr9 17730554 17732251 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g44320 expressed protein gene expressed protein chr6 26755217 26756599 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g48180 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr7 28778893 28782945 - five_prime_UTR,CDS,downstream 9 LOC_Os02g46180 DUF581 domain containing protein, expressed gene DUF581 domain containing protein, expressed chr2 28130460 28131590 - three_prime_UTR,promoter,downstream 9 LOC_Os11g30620 expressed protein gene expressed protein chr11 17363153 17365247 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os10g40620 expressed protein gene expressed protein chr10 21716102 21718722 - five_prime_UTR,promoter,downstream 9 LOC_Os05g11210 lachrymatory factor synthase, putative, expressed gene lachrymatory factor synthase, putative, expressed chr5 6333046 6333847 + CDS,three_prime_UTR 9 LOC_Os05g26210 ATOFP17/OFP17, putative gene ATOFP17/OFP17, putative chr5 15193519 15194232 + CDS,promoter,downstream 9 LOC_Os02g30550 conserved hypothetical protein gene conserved hypothetical protein chr2 18175992 18176204 + CDS,downstream 9 LOC_Os04g59420 expressed protein gene expressed protein chr4 35141900 35143496 + five_prime_UTR,promoter 9 LOC_Os05g11910 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr5 6787618 6791533 + CDS,promoter 9 LOC_Os07g03590 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1436292 1437551 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g51000 carrier, putative gene carrier, putative chr6 30865015 30865881 + CDS,promoter,downstream 9 LOC_Os09g26920 OsSub57 - Putative Subtilisin homologue, expressed gene OsSub57 - Putative Subtilisin homologue, expressed chr9 16355706 16359009 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os09g20400 expressed protein gene expressed protein chr9 12262314 12266429 - five_prime_UTR,CDS,downstream 9 LOC_Os09g32360 gp176, putative, expressed gene gp176, putative, expressed chr9 19329404 19331512 - five_prime_UTR,CDS,downstream 9 LOC_Os01g03310 BBTI1 - Bowman-Birk type bran trypsin inhibitor precursor, expressed gene BBTI1 - Bowman-Birk type bran trypsin inhibitor precursor, expressed chr1 1337229 1338139 - three_prime_UTR,promoter 9 LOC_Os04g38670 amino acid transporter family protein, putative, expressed gene amino acid transporter family protein, putative, expressed chr4 22786688 22787204 + CDS,promoter,downstream 9 LOC_Os01g65760 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 38171727 38173620 - five_prime_UTR 9 LOC_Os07g16260 hypothetical protein gene hypothetical protein chr7 9489444 9489857 + CDS,downstream 9 LOC_Os09g16050 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr9 9801156 9803312 - CDS 9 LOC_Os02g53280 expressed protein gene expressed protein chr2 32605828 32608480 - CDS,downstream 9 LOC_Os09g11870 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 6650255 6655572 - CDS,downstream 9 LOC_Os02g18750 expressed protein gene expressed protein chr2 10931589 10932547 + CDS,three_prime_UTR,downstream 9 LOC_Os06g13040 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr6 7143205 7145075 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g09980 expressed protein gene expressed protein chr6 5089955 5091122 + three_prime_UTR 9 LOC_Os03g20330 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr3 11496504 11497395 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os02g47230 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed gene Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed chr2 28820839 28827763 - five_prime_UTR 9 LOC_Os03g25910 hypothetical protein gene hypothetical protein chr3 14830903 14831656 + CDS,promoter,downstream 9 LOC_Os08g24610 hypothetical protein gene hypothetical protein chr8 14873637 14874695 - CDS,promoter 9 LOC_Os12g10270 transposon protein, putative, Ac/Ds sub-class gene transposon protein, putative, Ac/Ds sub-class chr12 5431561 5433649 + CDS 9 LOC_Os10g05088 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr10 2491565 2495841 + CDS 9 LOC_Os08g12990 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 7704974 7715630 - CDS,downstream 9 LOC_Os02g28680 expressed protein gene expressed protein chr2 16960601 16962469 + CDS,promoter,downstream 9 LOC_Os07g11050 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr7 6088993 6090036 + CDS,downstream 9 LOC_Os01g49240 limonoid UDP-glucosyltransferase, putative, expressed gene limonoid UDP-glucosyltransferase, putative, expressed chr1 28306608 28308456 + CDS,three_prime_UTR,promoter 9 LOC_Os05g49840 phospholipase, putative, expressed gene phospholipase, putative, expressed chr5 28535695 28540621 - CDS,promoter,downstream 9 LOC_Os10g04020 OsFBX356 - F-box domain containing protein, expressed gene OsFBX356 - F-box domain containing protein, expressed chr10 1837751 1838974 + CDS,three_prime_UTR,downstream 9 LOC_Os08g29770 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr8 18302651 18307244 + five_prime_UTR,CDS,promoter 9 LOC_Os09g39090 vignain precursor, putative, expressed gene vignain precursor, putative, expressed chr9 22437578 22438944 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g10750 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr6 5613000 5616154 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os07g27030 OsFBX236 - F-box domain containing protein gene OsFBX236 - F-box domain containing protein chr7 15658598 15661069 - CDS,promoter 9 LOC_Os11g11430 OsIAA29 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA29 - Auxin-responsive Aux/IAA gene family member, expressed chr11 6352367 6354259 + CDS,three_prime_UTR 9 LOC_Os04g56080 S-locus-like receptor protein kinase, putative, expressed gene S-locus-like receptor protein kinase, putative, expressed chr4 33214453 33216999 - CDS,promoter,downstream 9 LOC_Os01g09990 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 5200862 5203046 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g04310 BHLH transcription factor, putative, expressed gene BHLH transcription factor, putative, expressed chr3 1982518 1984732 - CDS,three_prime_UTR,downstream 9 LOC_Os06g38710 hypothetical protein gene hypothetical protein chr6 22982848 22983680 - CDS,downstream 9 LOC_Os05g02900 expressed protein gene expressed protein chr5 1060896 1061982 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g04980 hypothetical protein gene hypothetical protein chr7 2189677 2192213 + CDS,promoter 9 LOC_Os01g24560 fruit bromelain precursor, putative, expressed gene fruit bromelain precursor, putative, expressed chr1 13841246 13842723 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g19130 cadmium tolerance factor, putative gene cadmium tolerance factor, putative chr6 10880038 10888582 + CDS 9 LOC_Os01g39690 expressed protein gene expressed protein chr1 22384147 22385566 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g32870 hypothetical protein gene hypothetical protein chr5 19191098 19192355 + CDS,downstream 9 LOC_Os08g25710 CSLD3 - cellulose synthase-like family D, expressed gene CSLD3 - cellulose synthase-like family D, expressed chr8 15639361 15643226 - CDS,three_prime_UTR 9 LOC_Os07g23260 hypothetical protein gene hypothetical protein chr7 13103731 13104948 - CDS,downstream 9 LOC_Os05g44792 conserved hypothetical protein gene conserved hypothetical protein chr5 25980372 25986846 - CDS 9 LOC_Os01g46990 hypothetical protein gene hypothetical protein chr1 26828032 26829957 - CDS,promoter,downstream 9 LOC_Os04g35970 OsFBL17 - F-box domain and LRR containing protein gene OsFBL17 - F-box domain and LRR containing protein chr4 21758153 21761608 - CDS,downstream 9 LOC_Os09g34890 expressed protein gene expressed protein chr9 20330398 20331847 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g05950 hypothetical protein gene hypothetical protein chr4 3077736 3079060 - CDS,promoter 9 LOC_Os08g09990 hypothetical protein gene hypothetical protein chr8 5773036 5775440 - CDS,downstream 9 LOC_Os09g20100 hypothetical protein gene hypothetical protein chr9 12043070 12044039 + CDS,downstream 9 LOC_Os01g45600 hypothetical protein gene hypothetical protein chr1 25906930 25907187 - CDS,promoter,downstream 9 LOC_Os03g43464 hypothetical protein gene hypothetical protein chr3 24244919 24246893 + CDS,promoter 9 LOC_Os12g27850 LGC1, putative gene LGC1, putative chr12 16409988 16410903 + CDS,downstream 9 LOC_Os08g04700 hypothetical protein gene hypothetical protein chr8 2340712 2341248 - CDS,downstream 9 LOC_Os10g17660 profilin domain containing protein, expressed gene profilin domain containing protein, expressed chr10 8856768 8857878 + three_prime_UTR 9 LOC_Os09g17190 OsFBX320 - F-box domain containing protein, expressed gene OsFBX320 - F-box domain containing protein, expressed chr9 10544686 10546370 - CDS,three_prime_UTR,promoter 9 LOC_Os09g08990 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 4774513 4777505 - five_prime_UTR,CDS,downstream 9 LOC_Os10g09240 expressed protein gene expressed protein chr10 5011035 5011697 - three_prime_UTR,promoter 9 LOC_Os01g56450 DUF567 domain containing protein, putative, expressed gene DUF567 domain containing protein, putative, expressed chr1 32533813 32534980 - three_prime_UTR,promoter,downstream 9 LOC_Os08g40390 sulfotransferase domain containing protein gene sulfotransferase domain containing protein chr8 25564129 25565104 - CDS,promoter 9 LOC_Os04g32800 basic proline-rich protein, putative, expressed gene basic proline-rich protein, putative, expressed chr4 19624307 19626460 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os12g42010 lipase class 3 family protein, putative gene lipase class 3 family protein, putative chr12 26012052 26013206 - CDS,promoter,downstream 9 LOC_Os07g49120 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr7 29416896 29418199 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g30920 OsFBA4 - F-box and FBA domain containing protein, expressed gene OsFBA4 - F-box and FBA domain containing protein, expressed chr12 18548423 18551937 + five_prime_UTR,CDS,promoter 9 LOC_Os04g44460 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr4 26135322 26136362 + CDS,promoter 9 LOC_Os02g14490 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 7985829 7988629 + CDS,promoter,downstream 9 LOC_Os02g50410 hypothetical protein gene hypothetical protein chr2 30779781 30782143 + CDS,promoter,downstream 9 LOC_Os10g01250 hypothetical protein gene hypothetical protein chr10 164751 165057 + CDS,downstream 9 LOC_Os01g33750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 18573096 18578801 + CDS 9 LOC_Os12g26380 dirigent, putative, expressed gene dirigent, putative, expressed chr12 15409786 15411208 + CDS 9 LOC_Os07g43860 hypothetical protein gene hypothetical protein chr7 26224915 26225547 + CDS,promoter,downstream 9 LOC_Os05g14370 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr5 8086832 8088515 + CDS,promoter,downstream 9 LOC_Os07g04900 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr7 2161645 2166123 - CDS,downstream 9 LOC_Os11g41659 unknown gene unknown chr11 24533414 24533607 - CDS,promoter,downstream 9 LOC_Os12g14440 Jacalin-like lectin domain containing protein, putative, expressed gene Jacalin-like lectin domain containing protein, putative, expressed chr12 8236834 8238558 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g04080 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr12 1712134 1713663 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g51520 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr4 30335231 30338431 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g34970 conserved hypothetical protein gene conserved hypothetical protein chr6 20336991 20337407 - CDS,promoter,downstream 9 LOC_Os05g31710 expressed protein gene expressed protein chr5 18402867 18404264 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g03830 OsWAK29 - OsWAK receptor-like protein kinase, expressed gene OsWAK29 - OsWAK receptor-like protein kinase, expressed chr4 1718766 1722846 + CDS 9 LOC_Os04g55159 LTPL125 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL125 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr4 32607093 32609055 - CDS,three_prime_UTR,downstream 9 LOC_Os07g04650 zinc finger C-x8-C-x5-C-x3-H type family protein gene zinc finger C-x8-C-x5-C-x3-H type family protein chr7 2061182 2062848 - CDS,downstream 9 LOC_Os12g43080 conserved hypothetical protein gene conserved hypothetical protein chr12 26719386 26722063 + CDS 9 LOC_Os10g39030 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr10 20730228 20735139 - CDS 9 LOC_Os12g27980 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 16492630 16496392 - CDS 9 LOC_Os09g02830 OsMADS78 - MADS-box family gene with M-alpha type-box gene OsMADS78 - MADS-box family gene with M-alpha type-box chr9 1324181 1324807 - CDS,downstream 9 LOC_Os08g45000 inorganic phosphate transporter, putative, expressed gene inorganic phosphate transporter, putative, expressed chr8 28241488 28243314 + five_prime_UTR,CDS,promoter 9 LOC_Os03g44000 LTPL15 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL15 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 24719307 24721220 + three_prime_UTR,promoter,downstream 9 LOC_Os08g35670 expressed protein gene expressed protein chr8 22490035 22495076 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g30160 hypothetical protein gene hypothetical protein chr12 18080308 18081435 + CDS,promoter 9 LOC_Os01g58950 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 34073784 34075313 + CDS,downstream 9 LOC_Os07g26180 cysteine-rich receptor-like protein kinase 42 precursor, putative gene cysteine-rich receptor-like protein kinase 42 precursor, putative chr7 15054461 15056089 + CDS,promoter,downstream 9 LOC_Os07g11630 LTPL163 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL163 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 6415024 6415725 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os05g13650 RNA recognition motif containing protein, putative gene RNA recognition motif containing protein, putative chr5 7562577 7563337 + CDS,promoter,downstream 9 LOC_Os08g04560 decarboxylase, putative, expressed gene decarboxylase, putative, expressed chr8 2267450 2269571 - CDS,three_prime_UTR 9 LOC_Os05g06390 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 3270721 3276910 + CDS,promoter 9 LOC_Os11g37800 mla1, putative gene mla1, putative chr11 21919075 21923647 + CDS,promoter 9 LOC_Os05g47650 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr5 27240341 27241953 + three_prime_UTR,promoter,downstream 9 LOC_Os12g07420 transmembrane protein 17, putative gene transmembrane protein 17, putative chr12 3661130 3661579 + CDS,promoter 9 LOC_Os11g47610 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28237190 28238382 - three_prime_UTR,promoter,downstream 9 LOC_Os03g50920 ZF-HD protein dimerisation region containing protein, expressed gene ZF-HD protein dimerisation region containing protein, expressed chr3 29083663 29084481 + CDS,three_prime_UTR,promoter 9 LOC_Os11g26770 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 14867285 14870127 - CDS,promoter,downstream 9 LOC_Os05g03390 expressed protein gene expressed protein chr5 1397281 1404520 - five_prime_UTR,downstream 9 LOC_Os02g20600 BTB/POZ domain containing protein, putative gene BTB/POZ domain containing protein, putative chr2 12146389 12147621 - CDS 9 LOC_Os07g26170 conserved hypothetical protein gene conserved hypothetical protein chr7 15047810 15049453 + CDS,promoter,downstream 9 LOC_Os10g05690 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr10 2848573 2854786 - CDS,three_prime_UTR,downstream 9 LOC_Os02g20700 expressed protein gene expressed protein chr2 12206618 12209178 - CDS 9 LOC_Os01g09080 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr1 4565304 4567617 + five_prime_UTR,promoter 9 LOC_Os07g30330 cytokinin-O-glucosyltransferase 2, putative, expressed gene cytokinin-O-glucosyltransferase 2, putative, expressed chr7 17944646 17946272 + three_prime_UTR,downstream 9 LOC_Os08g02730 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr8 1147945 1149557 + five_prime_UTR,promoter 9 LOC_Os07g18550 hypothetical protein gene hypothetical protein chr7 10974395 10974808 - CDS,promoter,downstream 9 LOC_Os04g25230 hypothetical protein gene hypothetical protein chr4 14577364 14578802 - CDS,promoter,downstream 9 LOC_Os11g41034 expressed protein gene expressed protein chr11 24095488 24104161 + five_prime_UTR 9 LOC_Os11g14880 LTPL32 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL32 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 8368430 8369098 + CDS 9 LOC_Os09g39810 AP2 domain containing protein gene AP2 domain containing protein chr9 22821100 22821495 - CDS,promoter 9 LOC_Os11g09600 OsFBX405 - F-box domain containing protein, expressed gene OsFBX405 - F-box domain containing protein, expressed chr11 5130960 5133680 - CDS,three_prime_UTR,downstream 9 LOC_Os01g59780 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr1 34573789 34576560 + CDS,promoter,downstream 9 LOC_Os09g07670 white-brown complex homolog protein 11, putative gene white-brown complex homolog protein 11, putative chr9 3865696 3868751 - CDS,downstream 9 LOC_Os05g44410 conserved hypothetical protein gene conserved hypothetical protein chr5 25783763 25784998 + CDS,promoter,downstream 9 LOC_Os11g04190 auxin efflux carrier component, putative, expressed gene auxin efflux carrier component, putative, expressed chr11 1701179 1704478 - five_prime_UTR,downstream 9 LOC_Os10g21590 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr10 10981856 10986565 - five_prime_UTR,CDS,downstream 9 LOC_Os06g33090 peroxidase precursor, putative gene peroxidase precursor, putative chr6 19263702 19265386 - CDS,promoter,downstream 9 LOC_Os10g20830 LTPL133 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL133 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 10491944 10492662 - CDS,three_prime_UTR,promoter 9 LOC_Os05g04450 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr5 2050476 2052090 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g28990 zinc finger family protein, putative, expressed gene zinc finger family protein, putative, expressed chr3 16456163 16458095 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g05390 hypothetical protein gene hypothetical protein chr10 2656324 2657384 + CDS 9 LOC_Os06g05260 pectate lyase precursor, putative, expressed gene pectate lyase precursor, putative, expressed chr6 2371993 2373947 + CDS,three_prime_UTR 9 LOC_Os01g08990 conserved hypothetical protein gene conserved hypothetical protein chr1 4508225 4512098 + CDS 9 LOC_Os08g37250 patatin, putative, expressed gene patatin, putative, expressed chr8 23542816 23545440 - CDS,three_prime_UTR,downstream 9 LOC_Os10g10700 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr10 5922464 5925109 + CDS 9 LOC_Os05g06130 transcription factor X1, putative, expressed gene transcription factor X1, putative, expressed chr5 3062829 3067575 + CDS 9 LOC_Os12g08130 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr12 4143523 4145607 - three_prime_UTR 9 LOC_Os08g04500 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr8 2209024 2212899 - CDS 9 LOC_Os10g09190 hypothetical protein gene hypothetical protein chr10 4978307 4978666 + CDS,promoter,downstream 9 LOC_Os03g41419 serpin domain containing protein, putative, expressed gene serpin domain containing protein, putative, expressed chr3 23046710 23051987 + CDS,three_prime_UTR,downstream 9 LOC_Os04g32300 OsGrx_C9 - glutaredoxin subgroup III gene OsGrx_C9 - glutaredoxin subgroup III chr4 19184438 19184845 + CDS 9 LOC_Os06g04200 starch synthase, putative, expressed gene starch synthase, putative, expressed chr6 1764623 1769657 + five_prime_UTR,CDS,promoter 9 LOC_Os09g28500 EF hand family protein, putative, expressed gene EF hand family protein, putative, expressed chr9 17331717 17332538 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os06g10260 cytochrome P450, putative gene cytochrome P450, putative chr6 5263604 5264959 - CDS,downstream 9 LOC_Os03g63840 hypothetical protein gene hypothetical protein chr3 36057978 36058936 + CDS,promoter 9 LOC_Os04g11390 expressed protein gene expressed protein chr4 6220532 6222017 - CDS,three_prime_UTR 9 LOC_Os10g41600 hypothetical protein gene hypothetical protein chr10 22328972 22330229 + CDS 9 LOC_Os05g34140 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 20119122 20122647 + CDS,promoter 9 LOC_Os08g01980 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr8 631775 633169 - CDS,promoter 9 LOC_Os11g42910 conserved hypothetical protein gene conserved hypothetical protein chr11 25392798 25400155 + CDS 9 LOC_Os08g43620 expressed protein gene expressed protein chr8 27580283 27581350 + CDS,three_prime_UTR,downstream 9 LOC_Os04g50920 OsWRKY37 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY37 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr4 29947362 29951418 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g31390 transcription factor, putative, expressed gene transcription factor, putative, expressed chr9 18867402 18876573 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g44250 cytokinin-O-glucosyltransferase 3, putative, expressed gene cytokinin-O-glucosyltransferase 3, putative, expressed chr4 26028575 26030279 - five_prime_UTR,CDS,downstream 9 LOC_Os01g56440 unknown gene unknown chr1 32526747 32526977 - CDS,promoter,downstream 9 LOC_Os03g25530 expressed protein gene expressed protein chr3 14577226 14577933 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g09520 LTPL59 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL59 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr4 5091070 5094089 - CDS,downstream 9 LOC_Os03g52320 GRF-interacting factor 1, putative, expressed gene GRF-interacting factor 1, putative, expressed chr3 30038118 30041834 - CDS,three_prime_UTR,promoter 9 LOC_Os05g35850 conserved hypothetical protein gene conserved hypothetical protein chr5 21206661 21208243 - CDS,promoter,downstream 9 LOC_Os01g60490 OsWRKY22 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY22 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 34980425 34984404 + CDS,promoter,downstream 9 LOC_Os01g09190 expressed protein gene expressed protein chr1 4613882 4614827 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os08g44670 calreticulin precursor, putative gene calreticulin precursor, putative chr8 28078665 28079958 + CDS,promoter 9 LOC_Os02g09240 cytochrome P450 71D8, putative, expressed gene cytochrome P450 71D8, putative, expressed chr2 4754170 4756306 + CDS 9 LOC_Os03g63644 hypothetical protein gene hypothetical protein chr3 35941132 35941426 - CDS,promoter,downstream 9 LOC_Os06g43910 two-component response regulator, putative gene two-component response regulator, putative chr6 26449764 26453699 + CDS,promoter 9 LOC_Os04g21160 triacylglycerol lipase 1 precursor, putative gene triacylglycerol lipase 1 precursor, putative chr4 11901780 11908766 - CDS,downstream 9 LOC_Os06g33100 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 19270206 19271894 - five_prime_UTR,downstream 9 LOC_Os05g12290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 7055806 7059960 + CDS 9 LOC_Os03g12790 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 6852791 6855384 - CDS,three_prime_UTR,downstream 9 LOC_Os09g18010 conserved hypothetical protein gene conserved hypothetical protein chr9 11021045 11027729 + CDS 9 LOC_Os02g54190 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr2 33215399 33217726 - five_prime_UTR,CDS,downstream 9 LOC_Os02g51550 DUF581 domain containing protein, expressed gene DUF581 domain containing protein, expressed chr2 31569939 31571707 + three_prime_UTR,downstream 9 LOC_Os07g09300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 4867358 4879264 - CDS,downstream 9 LOC_Os01g38720 nucleic acid binding protein, putative gene nucleic acid binding protein, putative chr1 21741264 21743010 + CDS 9 LOC_Os10g10720 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 5933045 5937590 + CDS 9 LOC_Os07g04380 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 1942387 1944206 + CDS 9 LOC_Os08g09110 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr8 5273867 5278297 - CDS,promoter 9 LOC_Os06g43410 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 26091519 26093624 + CDS,promoter 9 LOC_Os11g41320 hypothetical protein gene hypothetical protein chr11 24314173 24315284 + CDS,promoter 9 LOC_Os11g11540 LGC1, putative gene LGC1, putative chr11 6413325 6413741 + CDS,promoter 9 LOC_Os04g03860 expressed protein gene expressed protein chr4 1750038 1755464 + CDS 9 LOC_Os09g37360 pectinesterase, putative gene pectinesterase, putative chr9 21574181 21575278 - CDS,downstream 9 LOC_Os05g35770 serine/threonine-protein kinase SAPK4, putative gene serine/threonine-protein kinase SAPK4, putative chr5 21166865 21168471 - CDS,downstream 9 LOC_Os04g56910 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr4 33743574 33745579 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g56130 lichenase-2 precursor, putative gene lichenase-2 precursor, putative chr3 31969047 31973730 + CDS,downstream 9 LOC_Os12g37210 hypothetical protein gene hypothetical protein chr12 22791019 22794011 - CDS,promoter,downstream 9 LOC_Os01g72760 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 42210838 42212648 + CDS,promoter 9 LOC_Os02g36140 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr2 21759140 21767549 + CDS 9 LOC_Os11g31850 hypothetical protein gene hypothetical protein chr11 18252268 18252927 - CDS,downstream 9 LOC_Os05g14770 hypothetical protein gene hypothetical protein chr5 8386993 8388381 + CDS 9 LOC_Os05g48990 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr5 28037650 28042695 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g03680 SCP-like extracellular protein gene SCP-like extracellular protein chr7 1495800 1496348 + CDS,promoter,downstream 9 LOC_Os10g22880 hypothetical protein gene hypothetical protein chr10 11816406 11817408 - CDS,downstream 9 LOC_Os08g37470 2-aminoethanethiol dioxygenase, putative, expressed gene 2-aminoethanethiol dioxygenase, putative, expressed chr8 23728000 23729579 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g01210 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr2 119391 121707 + five_prime_UTR,CDS,downstream 9 LOC_Os04g04640 decarboxylase, putative gene decarboxylase, putative chr4 2216468 2229855 - CDS,promoter 9 LOC_Os09g36700 ribonuclease T2 family domain containing protein, expressed gene ribonuclease T2 family domain containing protein, expressed chr9 21164701 21167169 - CDS 9 LOC_Os07g44430 peroxiredoxin, putative gene peroxiredoxin, putative chr7 26547658 26548810 + CDS,promoter,downstream 9 LOC_Os11g18500 hypothetical protein gene hypothetical protein chr11 10422455 10425312 - CDS,downstream 9 LOC_Os12g10540 OsMADS13 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS13 - MADS-box family gene with MIKCc type-box, expressed chr12 5583579 5589271 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os05g28810 hypothetical protein gene hypothetical protein chr5 16827387 16828368 + CDS,promoter,downstream 9 LOC_Os05g25480 OsMan06 - Endo-Beta-Mannanase, expressed gene OsMan06 - Endo-Beta-Mannanase, expressed chr5 14758806 14761211 + CDS 9 LOC_Os01g31760 acyl-ACP thioesterase, putative gene acyl-ACP thioesterase, putative chr1 17383194 17388544 + CDS,promoter 9 LOC_Os01g49160 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 28248876 28250472 + three_prime_UTR,promoter,downstream 9 LOC_Os08g36680 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed gene bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed chr8 23144504 23148767 - five_prime_UTR,CDS,downstream 9 LOC_Os08g42490 DC1 domain containing protein, expressed gene DC1 domain containing protein, expressed chr8 26859142 26860134 - CDS,downstream 9 LOC_Os03g42990 hypothetical protein gene hypothetical protein chr3 23975742 23976461 + CDS,promoter 9 LOC_Os02g36264 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr2 21880441 21893361 - five_prime_UTR,downstream 9 LOC_Os08g08710 expressed protein gene expressed protein chr8 5045721 5047615 - five_prime_UTR,CDS,downstream 9 LOC_Os05g46800 hypothetical protein gene hypothetical protein chr5 27041145 27043043 + CDS,promoter 9 LOC_Os11g04750 hypothetical protein gene hypothetical protein chr11 2020289 2021508 + CDS 9 LOC_Os08g31920 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr8 19784499 19786826 - CDS 9 LOC_Os10g39270 nucleoid DNA-binding, putative gene nucleoid DNA-binding, putative chr10 20889612 20890805 + CDS,promoter,downstream 9 LOC_Os06g18790 anthocyanidin 3-O-glucosyltransferase, putative gene anthocyanidin 3-O-glucosyltransferase, putative chr6 10658719 10659690 + CDS,promoter,downstream 9 LOC_Os09g13040 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr9 7518040 7522188 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g57050 jasmonate O-methyltransferase, putative gene jasmonate O-methyltransferase, putative chr4 33816198 33820106 + CDS,promoter 9 LOC_Os11g06980 BURP domain containing protein, expressed gene BURP domain containing protein, expressed chr11 3459802 3463905 - CDS,three_prime_UTR,promoter 9 LOC_Os01g53260 OsWRKY23 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY23 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 30603251 30607033 + CDS,three_prime_UTR,promoter 9 LOC_Os02g05670 expressed protein gene expressed protein chr2 2772141 2774718 - CDS,three_prime_UTR 9 LOC_Os01g10530 expressed protein gene expressed protein chr1 5590697 5598234 - CDS,three_prime_UTR,promoter 9 LOC_Os02g45080 MYB family transcription factor, putative gene MYB family transcription factor, putative chr2 27341534 27344352 + CDS,promoter 9 LOC_Os07g02820 expressed protein gene expressed protein chr7 1060133 1061408 - CDS,downstream 9 LOC_Os05g46370 bHelix-loop-helix transcription factor, putative, expressed gene bHelix-loop-helix transcription factor, putative, expressed chr5 26816802 26818711 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g24300 LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL1 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 13832212 13833323 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os11g40180 dirigent, putative, expressed gene dirigent, putative, expressed chr11 23498667 23502767 + CDS,promoter 9 LOC_Os06g22420 ZOS6-04 - C2H2 zinc finger protein, expressed gene ZOS6-04 - C2H2 zinc finger protein, expressed chr6 13030174 13031067 - CDS,downstream 9 LOC_Os11g36240 pectinesterase, putative gene pectinesterase, putative chr11 20869211 20871856 + CDS,promoter,downstream 9 LOC_Os11g31760 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr11 18162464 18169290 - CDS,downstream 9 LOC_Os11g33990 hypothetical protein gene hypothetical protein chr11 19404246 19404710 - CDS,downstream 9 LOC_Os01g56500 expressed protein gene expressed protein chr1 32572843 32574849 - CDS,promoter,downstream 9 LOC_Os06g39960 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr6 23772210 23775883 + CDS,promoter 9 LOC_Os11g05410 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr11 2428830 2432936 + CDS 9 LOC_Os12g41310 RNA recognition motif containing protein, putative gene RNA recognition motif containing protein, putative chr12 25580990 25581514 + CDS,promoter 9 LOC_Os05g16000 hypothetical protein gene hypothetical protein chr5 9035465 9037612 - CDS 9 LOC_Os03g01780 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr3 484269 485554 + CDS 9 LOC_Os01g66480 expressed protein gene expressed protein chr1 38593407 38593700 + CDS,promoter,downstream 9 LOC_Os04g46060 OsWRKY36 - Superfamily of TFs having WRKY and zinc finger domains gene OsWRKY36 - Superfamily of TFs having WRKY and zinc finger domains chr4 27099144 27105852 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g34060 proteins of unknown function domain containing protein, expressed gene proteins of unknown function domain containing protein, expressed chr6 19832726 19834253 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g23770 cysteine protease, putative, expressed gene cysteine protease, putative, expressed chr11 12979164 12983014 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g50900 expressed protein gene expressed protein chr2 31105971 31108745 + CDS,three_prime_UTR,downstream 9 LOC_Os04g44450 hypothetical protein gene hypothetical protein chr4 26132375 26133883 + CDS,downstream 9 LOC_Os04g24750 aspartic proteinase nepenthesin precursor, putative gene aspartic proteinase nepenthesin precursor, putative chr4 14200289 14201481 + CDS,downstream 9 LOC_Os11g38630 conserved hypothetical protein gene conserved hypothetical protein chr11 22434555 22442173 + CDS,promoter,downstream 9 LOC_Os01g01840 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 454512 459716 + five_prime_UTR,CDS,promoter 9 LOC_Os02g56610 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr2 34681755 34683854 - three_prime_UTR,downstream 9 LOC_Os08g26230 expressed protein gene expressed protein chr8 15981452 15988934 - five_prime_UTR,CDS,downstream 9 LOC_Os08g43070 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr8 27220454 27221245 - CDS,promoter,downstream 9 LOC_Os07g06190 ethylene-insensitive protein 2, putative, expressed gene ethylene-insensitive protein 2, putative, expressed chr7 3015456 3023265 + CDS,promoter,downstream 9 LOC_Os08g44910 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr8 28198310 28200007 - five_prime_UTR,downstream 9 LOC_Os11g25020 plant-specific domain TIGR01615 family protein gene plant-specific domain TIGR01615 family protein chr11 13784605 13785776 + CDS 9 LOC_Os06g35970 meiosis 5, putative, expressed gene meiosis 5, putative, expressed chr6 21005679 21007266 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g45540 zinc-binding protein, putative, expressed gene zinc-binding protein, putative, expressed chr6 27556185 27560601 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os04g46850 expressed protein gene expressed protein chr4 27574034 27574574 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g12110 conserved hypothetical protein gene conserved hypothetical protein chr4 6655223 6657107 - CDS,downstream 9 LOC_Os08g27260 hypothetical protein gene hypothetical protein chr8 16643027 16643278 - CDS,promoter,downstream 9 LOC_Os02g29150 OsFBO11 - F-box and other domain containing protein, expressed gene OsFBO11 - F-box and other domain containing protein, expressed chr2 17265313 17269995 - CDS,three_prime_UTR,downstream 9 LOC_Os12g27510 conserved hypothetical protein gene conserved hypothetical protein chr12 16189229 16190454 + CDS,downstream 9 LOC_Os08g38840 hypothetical protein gene hypothetical protein chr8 24545302 24547630 + CDS,promoter 9 LOC_Os02g08270 class I glutamine amidotransferase, putative, expressed gene class I glutamine amidotransferase, putative, expressed chr2 4390130 4393561 - CDS,downstream 9 LOC_Os05g32890 response regulator receiver domain containing protein gene response regulator receiver domain containing protein chr5 19199064 19203080 - CDS,promoter,downstream 9 LOC_Os10g14020 TPD1, putative, expressed gene TPD1, putative, expressed chr10 7639541 7640716 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g41210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 22917217 22921344 + CDS 9 LOC_Os02g40330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr2 24403440 24408215 - three_prime_UTR,five_prime_UTR,promoter 9 LOC_Os05g48850 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr5 27940521 27942357 + five_prime_UTR,CDS,promoter 9 LOC_Os04g55970 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed gene AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed chr4 33156868 33161452 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g28590 ATPase 2, putative, expressed gene ATPase 2, putative, expressed chr12 16902970 16904824 + five_prime_UTR,promoter 9 LOC_Os01g47060 expressed protein gene expressed protein chr1 26876565 26878233 + CDS,downstream 9 LOC_Os06g29770 hypothetical protein gene hypothetical protein chr6 17103032 17104994 + CDS,downstream 9 LOC_Os02g27830 conserved hypothetical protein gene conserved hypothetical protein chr2 16471329 16478176 - CDS,downstream 9 LOC_Os08g12600 expressed protein gene expressed protein chr8 7450368 7451406 + CDS,promoter 9 LOC_Os09g01520 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 372351 374795 + CDS,promoter 9 LOC_Os05g51860 conserved hypothetical protein gene conserved hypothetical protein chr5 29700534 29704394 + CDS,promoter 9 LOC_Os10g05790 POEI4 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI4 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2920743 2922655 - three_prime_UTR,promoter 9 LOC_Os03g03540 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr3 1527965 1530620 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g33650 conserved hypothetical protein gene conserved hypothetical protein chr1 18519534 18521006 + CDS,downstream 9 LOC_Os04g45290 glycosyl hydrolases, putative, expressed gene glycosyl hydrolases, putative, expressed chr4 26580076 26586770 + five_prime_UTR,CDS,promoter 9 LOC_Os01g22670 fruit bromelain precursor, putative, expressed gene fruit bromelain precursor, putative, expressed chr1 12744104 12746055 - five_prime_UTR,CDS,downstream 9 LOC_Os10g12500 integral membrane protein DUF6 containing protein gene integral membrane protein DUF6 containing protein chr10 6962461 6968984 + CDS 9 LOC_Os11g28940 expressed protein gene expressed protein chr11 16278230 16279372 + CDS,three_prime_UTR 9 LOC_Os09g17329 expressed protein gene expressed protein chr9 10603979 10621217 - CDS,five_prime_UTR 9 LOC_Os04g39590 fasciclin domain containing protein gene fasciclin domain containing protein chr4 23412950 23414118 - CDS,promoter,downstream 9 LOC_Os07g42390 DUF581 domain containing protein, expressed gene DUF581 domain containing protein, expressed chr7 25362525 25364559 - CDS,three_prime_UTR,promoter 9 LOC_Os02g51119 expressed protein gene expressed protein chr2 31267342 31278180 - five_prime_UTR,CDS 9 LOC_Os02g30690 steroleosin, putative gene steroleosin, putative chr2 18279457 18280842 + CDS,promoter,downstream 9 LOC_Os09g23450 hypothetical protein gene hypothetical protein chr9 13936074 13936307 - CDS,promoter,downstream 9 LOC_Os07g05260 expressed protein gene expressed protein chr7 2368169 2369748 + CDS 9 LOC_Os09g20710 RNA recognition motif containing protein, putative gene RNA recognition motif containing protein, putative chr9 12474469 12476640 + CDS,promoter 9 LOC_Os07g02720 conserved hypothetical protein gene conserved hypothetical protein chr7 989616 991566 - CDS 9 LOC_Os03g51720 hypothetical protein gene hypothetical protein chr3 29629583 29631050 - CDS,promoter,downstream 9 LOC_Os08g17090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 10457592 10460687 + CDS,promoter 9 LOC_Os10g29070 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 15072478 15074808 - CDS,downstream 9 LOC_Os02g36680 expressed protein gene expressed protein chr2 22134733 22136127 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g40730 hypothetical protein gene hypothetical protein chr5 23816238 23818954 + CDS 9 LOC_Os09g32260 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr9 19252742 19255559 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g40710 DELLA protein GAI, putative gene DELLA protein GAI, putative chr5 23808937 23810418 + CDS,promoter 9 LOC_Os08g35070 protein binding protein, putative gene protein binding protein, putative chr8 22104652 22105338 + CDS,downstream 9 LOC_Os06g05470 expressed protein gene expressed protein chr6 2471605 2472407 + five_prime_UTR,CDS,promoter 9 LOC_Os07g25360 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 14494262 14498212 + five_prime_UTR,CDS,promoter 9 LOC_Os11g29720 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr11 16768137 16772030 - five_prime_UTR,CDS 9 LOC_Os11g42850 expressed protein gene expressed protein chr11 25340122 25344308 - CDS,downstream 9 LOC_Os07g40000 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr7 23995521 23996571 + three_prime_UTR,downstream 9 LOC_Os05g01580 integral membrane protein DUF6 containing protein gene integral membrane protein DUF6 containing protein chr5 345496 347426 + CDS,promoter 9 LOC_Os05g35900 conserved hypothetical protein gene conserved hypothetical protein chr5 21229513 21230004 + CDS,promoter,downstream 9 LOC_Os05g16280 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr5 9216942 9222872 - CDS,promoter 9 LOC_Os03g24710 terpene synthase, N-terminal domain containing protein gene terpene synthase, N-terminal domain containing protein chr3 14085985 14087070 + CDS,downstream 9 LOC_Os01g18170 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr1 10166862 10168292 - three_prime_UTR,promoter 9 LOC_Os08g23170 expressed protein gene expressed protein chr8 13970401 13971088 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g25060 cysteine-rich receptor-like protein kinase, putative, expressed gene cysteine-rich receptor-like protein kinase, putative, expressed chr4 14444180 14445525 - five_prime_UTR,CDS,downstream 9 LOC_Os01g55370 expressed protein gene expressed protein chr1 31888667 31890389 - five_prime_UTR,downstream 9 LOC_Os09g29390 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr9 17842406 17843735 + CDS,three_prime_UTR 9 LOC_Os06g20280 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 11636291 11642315 - CDS 9 LOC_Os12g18410 expressed protein gene expressed protein chr12 10649374 10650863 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g51190 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed gene lysine ketoglutarate reductase trans-splicing related 1, putative, expressed chr6 30966321 30972488 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g50770 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr2 30993878 30995896 + three_prime_UTR 9 LOC_Os07g41400 EGG APPARATUS-1, putative, expressed gene EGG APPARATUS-1, putative, expressed chr7 24804560 24805019 + three_prime_UTR,downstream 9 LOC_Os01g74110 metal cation transporter, putative, expressed gene metal cation transporter, putative, expressed chr1 42904522 42906430 - CDS,three_prime_UTR 9 LOC_Os07g15770 CCT motif family protein gene CCT motif family protein chr7 9151408 9154191 - CDS,promoter,downstream 9 LOC_Os01g67410 AP2/EREBP transcription factor BABY BOOM, putative, expressed gene AP2/EREBP transcription factor BABY BOOM, putative, expressed chr1 39140087 39144436 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os10g30490 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative gene STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative chr10 15788650 15789105 + CDS,promoter,downstream 9 LOC_Os01g37990 conserved hypothetical protein gene conserved hypothetical protein chr1 21281598 21283803 + CDS,downstream 9 LOC_Os09g33770 protein transport protein Sec61 subunit alpha isoform 1, putative gene protein transport protein Sec61 subunit alpha isoform 1, putative chr9 19940056 19940697 + CDS,promoter,downstream 9 LOC_Os03g06780 hypothetical protein gene hypothetical protein chr3 3445995 3446249 - CDS,promoter,downstream 9 LOC_Os05g28350 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr5 16543079 16544295 - CDS,downstream 9 LOC_Os04g40040 copper methylamine oxidase precursor, putative, expressed gene copper methylamine oxidase precursor, putative, expressed chr4 23644562 23651133 - CDS,downstream 9 LOC_Os02g36350 expressed protein gene expressed protein chr2 21944015 21945906 - five_prime_UTR,CDS,downstream 9 LOC_Os09g37958 cupin domain containing protein gene cupin domain containing protein chr9 21886822 21888489 - CDS,promoter,downstream 9 LOC_Os04g49720 pectinesterase inhibitor domain containing protein, putative, expressed gene pectinesterase inhibitor domain containing protein, putative, expressed chr4 29468946 29469608 + five_prime_UTR,CDS,promoter 9 LOC_Os08g37180 patatin, putative, expressed gene patatin, putative, expressed chr8 23489179 23491818 - CDS,three_prime_UTR,downstream 9 LOC_Os10g08026 lecithin:cholesterol acyltransferase, putative, expressed gene lecithin:cholesterol acyltransferase, putative, expressed chr10 4363387 4364905 - CDS,three_prime_UTR,promoter 9 LOC_Os03g04840 expressed protein gene expressed protein chr3 2301594 2305803 + CDS 9 LOC_Os05g31874 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 18489854 18494893 + CDS,promoter 9 LOC_Os02g56400 OsWAK22 - OsWAK receptor-like protein kinase gene OsWAK22 - OsWAK receptor-like protein kinase chr2 34525687 34528410 - CDS 9 LOC_Os12g04530 hypothetical protein gene hypothetical protein chr12 1925876 1927095 + CDS 9 LOC_Os01g22230 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 12498897 12503189 + five_prime_UTR,CDS,promoter 9 LOC_Os03g24240 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr3 13794969 13798372 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g35739 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr4 21613538 21614277 + CDS 9 LOC_Os11g20080 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr11 11577707 11581256 + CDS,three_prime_UTR 9 LOC_Os11g45720 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr11 27184638 27186796 - CDS 9 LOC_Os02g32400 50S ribosomal protein L19, chloroplast precursor, putative gene 50S ribosomal protein L19, chloroplast precursor, putative chr2 19151963 19155044 + CDS,promoter 9 LOC_Os06g40870 expressed protein gene expressed protein chr6 24372216 24374215 - CDS,three_prime_UTR 9 LOC_Os03g01012 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr3 7502 8736 - five_prime_UTR,downstream 9 LOC_Os06g17220 UDP-glycosyltransferase, putative, expressed gene UDP-glycosyltransferase, putative, expressed chr6 9973992 9975881 + five_prime_UTR,CDS,downstream 9 LOC_Os03g27530 OsSCP16 - Putative Serine Carboxypeptidase homologue gene OsSCP16 - Putative Serine Carboxypeptidase homologue chr3 15788380 15795305 - CDS 9 LOC_Os01g43960 hypothetical protein gene hypothetical protein chr1 25192440 25192783 - CDS,promoter 9 LOC_Os03g02040 remorin, putative, expressed gene remorin, putative, expressed chr3 645945 648467 - five_prime_UTR,CDS,downstream 9 LOC_Os02g46310 pectinesterase, putative gene pectinesterase, putative chr2 28224800 28226521 + CDS,promoter 9 LOC_Os03g12730 receptor protein kinase CLAVATA1 precursor, putative, expressed gene receptor protein kinase CLAVATA1 precursor, putative, expressed chr3 6803510 6807794 - three_prime_UTR,promoter 9 LOC_Os09g08525 hypothetical protein gene hypothetical protein chr9 4449600 4450858 + CDS,downstream 9 LOC_Os06g35140 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr6 20453253 20456008 - five_prime_UTR,CDS 9 LOC_Os06g47440 conserved hypothetical protein gene conserved hypothetical protein chr6 28735302 28737622 - CDS,downstream 9 LOC_Os03g06970 tetratricopeptide repeat domain containing protein, expressed gene tetratricopeptide repeat domain containing protein, expressed chr3 3554486 3557348 - CDS,promoter,downstream 9 LOC_Os05g16054 expressed protein gene expressed protein chr5 9061237 9062696 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os02g37190 expressed protein gene expressed protein chr2 22471913 22473077 - CDS,downstream 9 LOC_Os04g44150 gibberellin 2-beta-dioxygenase 7, putative, expressed gene gibberellin 2-beta-dioxygenase 7, putative, expressed chr4 25945581 25949230 - five_prime_UTR,CDS,downstream 9 LOC_Os03g07700 expressed protein gene expressed protein chr3 3910608 3911026 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g38510 pectate lyase precursor, putative, expressed gene pectate lyase precursor, putative, expressed chr6 22820120 22822481 + CDS,promoter 9 LOC_Os04g10910 hypothetical protein gene hypothetical protein chr4 5907154 5910011 - CDS,downstream 9 LOC_Os06g42120 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr6 25291063 25292336 - five_prime_UTR,CDS,downstream 9 LOC_Os01g71820 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41596227 41597649 - five_prime_UTR,CDS,downstream 9 LOC_Os09g16250 hypothetical protein gene hypothetical protein chr9 9918342 9918698 - CDS,promoter,downstream 9 LOC_Os12g27470 expressed protein gene expressed protein chr12 16165198 16165899 + five_prime_UTR,CDS,promoter 9 LOC_Os10g40210 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 21454495 21456942 + CDS,promoter 9 LOC_Os06g04600 Brix domain containing protein, putative, expressed gene Brix domain containing protein, putative, expressed chr6 1999611 2008077 - three_prime_UTR 9 LOC_Os01g36760 hypothetical protein gene hypothetical protein chr1 20413271 20415217 - CDS,downstream 9 LOC_Os10g10334 conserved hypothetical protein gene conserved hypothetical protein chr10 5693510 5697640 + CDS,promoter 9 LOC_Os11g33210 OsFBL57 - F-box domain and LRR containing protein gene OsFBL57 - F-box domain and LRR containing protein chr11 19174496 19176298 + CDS,downstream 9 LOC_Os01g03840 ZOS1-02 - C2H2 zinc finger protein, expressed gene ZOS1-02 - C2H2 zinc finger protein, expressed chr1 1624159 1625771 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g03950 legume lectins beta domain containing protein, putative gene legume lectins beta domain containing protein, putative chr10 1791192 1792067 + CDS,promoter 9 LOC_Os04g41620 CHIT2 - Chitinase family protein precursor, expressed gene CHIT2 - Chitinase family protein precursor, expressed chr4 24502569 24504169 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g32930 SGS domain containing protein, expressed gene SGS domain containing protein, expressed chr1 18076418 18077139 + CDS,downstream 9 LOC_Os04g42970 hypothetical protein gene hypothetical protein chr4 25235162 25235776 + CDS,promoter 9 LOC_Os08g36030 plant viral response family protein, putative, expressed gene plant viral response family protein, putative, expressed chr8 22708594 22709912 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os07g41650 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr7 24960175 24963390 - five_prime_UTR,downstream 9 LOC_Os03g13210 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 7127179 7129340 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g40620 peptide methionine sulfoxide reductase, putative, expressed gene peptide methionine sulfoxide reductase, putative, expressed chr4 23923787 23924619 - CDS,three_prime_UTR 9 LOC_Os09g08580 expressed protein gene expressed protein chr9 4473924 4475106 + CDS,downstream 9 LOC_Os10g37700 hydrolase protein, putative gene hydrolase protein, putative chr10 20102023 20102432 + CDS,downstream 9 LOC_Os01g04120 ZOS1-03 - C2H2 zinc finger protein, expressed gene ZOS1-03 - C2H2 zinc finger protein, expressed chr1 1800924 1805267 - five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os01g58910 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr1 34042096 34044382 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g07100 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr8 3971219 3976337 + five_prime_UTR,CDS,promoter 9 LOC_Os08g02320 hypothetical protein gene hypothetical protein chr8 887813 889115 + CDS,promoter 9 LOC_Os04g33920 LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr4 20371165 20372529 + five_prime_UTR 9 LOC_Os06g45890 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr6 27776558 27779780 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os08g05300 hypothetical protein gene hypothetical protein chr8 2774593 2775241 + CDS,downstream 9 LOC_Os04g52240 terpene synthase, putative gene terpene synthase, putative chr4 30849930 30858310 + CDS,downstream 9 LOC_Os04g09900 ent-kaurene synthase, chloroplast precursor, putative, expressed gene ent-kaurene synthase, chloroplast precursor, putative, expressed chr4 5313501 5321868 + five_prime_UTR,CDS 9 LOC_Os11g04310 cytochrome P450, putative gene cytochrome P450, putative chr11 1794376 1795923 - CDS,downstream 9 LOC_Os06g19110 cadmium tolerance factor, putative, expressed gene cadmium tolerance factor, putative, expressed chr6 10870810 10874145 - five_prime_UTR,CDS,downstream 9 LOC_Os11g38620 expressed protein gene expressed protein chr11 22421273 22425906 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g61720 glycerol-3-phosphate acyltransferase, putative, expressed gene glycerol-3-phosphate acyltransferase, putative, expressed chr3 34978066 34983629 + five_prime_UTR,CDS,promoter 9 LOC_Os08g16320 cytochrome P450 protein, putative gene cytochrome P450 protein, putative chr8 9957977 9959479 - CDS,promoter 9 LOC_Os01g11750 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 6360526 6362457 + CDS,promoter,downstream 9 LOC_Os01g24080 hypothetical protein gene hypothetical protein chr1 13576925 13580183 + CDS,promoter 9 LOC_Os08g45060 protein Kinase-like protein TMKL1 precursor, putative, expressed gene protein Kinase-like protein TMKL1 precursor, putative, expressed chr8 28287371 28289932 - CDS,three_prime_UTR 9 LOC_Os09g37180 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr9 21450099 21452167 + five_prime_UTR,promoter,downstream 9 LOC_Os09g25190 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr9 15089662 15091959 + CDS,three_prime_UTR 9 LOC_Os07g39820 SHR, putative, expressed gene SHR, putative, expressed chr7 23867423 23870151 + three_prime_UTR,promoter,downstream 9 LOC_Os11g36010 hypothetical protein gene hypothetical protein chr11 20696833 20699474 + CDS 9 LOC_Os04g14250 hypothetical protein gene hypothetical protein chr4 7980920 7985081 + CDS 9 LOC_Os08g01550 expressed protein gene expressed protein chr8 327874 329017 + CDS,three_prime_UTR 9 LOC_Os06g33940 NAC domain containing protein, putative, expressed gene NAC domain containing protein, putative, expressed chr6 19742868 19745460 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os06g16770 expressed protein gene expressed protein chr6 9711602 9711993 - CDS,promoter 9 LOC_Os12g03790 rhamnogalacturonate lyase, putative, expressed gene rhamnogalacturonate lyase, putative, expressed chr12 1540850 1545542 - CDS,downstream 9 LOC_Os01g65850 CHD3-type chromatin-remodeling factor PICKLE, putative gene CHD3-type chromatin-remodeling factor PICKLE, putative chr1 38227769 38236185 - CDS 9 LOC_Os06g04490 hypothetical protein gene hypothetical protein chr6 1923874 1924299 + CDS,promoter,downstream 9 LOC_Os03g47042 homeobox protein rough sheath 1, putative gene homeobox protein rough sheath 1, putative chr3 26602016 26603289 - CDS 9 LOC_Os08g37740 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 23900081 23903421 - CDS,promoter,downstream 9 LOC_Os10g05770 hypothetical protein gene hypothetical protein chr10 2904111 2907348 + CDS,downstream 9 LOC_Os11g32550 conserved hypothetical protein gene conserved hypothetical protein chr11 18744930 18745530 - CDS,downstream 9 LOC_Os12g27210 expressed protein gene expressed protein chr12 15963259 15965887 + three_prime_UTR,promoter 9 LOC_Os12g36310 expressed protein gene expressed protein chr12 22196436 22199755 + CDS 9 LOC_Os02g22160 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr2 13200790 13203749 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os01g14010 ZOS1-05 - C2H2 zinc finger protein, expressed gene ZOS1-05 - C2H2 zinc finger protein, expressed chr1 7846742 7849177 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g01670 hypothetical protein gene hypothetical protein chr10 443514 444539 - CDS,promoter 9 LOC_Os04g08828 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 4869813 4873784 + five_prime_UTR,CDS 9 LOC_Os02g52000 phosphate-induced protein 1 conserved region domain containing protein, expressed gene phosphate-induced protein 1 conserved region domain containing protein, expressed chr2 31828939 31830484 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os07g13490 hypothetical protein gene hypothetical protein chr7 7728232 7730823 - CDS 9 LOC_Os04g48510 growth regulating factor protein, putative, expressed gene growth regulating factor protein, putative, expressed chr4 28736755 28738556 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g29220 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr12 17296028 17299281 - CDS,three_prime_UTR 9 LOC_Os05g49280 GATA zinc finger domain containing protein, expressed gene GATA zinc finger domain containing protein, expressed chr5 28209177 28210205 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g54240 wound induced protein, putative, expressed gene wound induced protein, putative, expressed chr4 32116514 32117348 - three_prime_UTR,promoter 9 LOC_Os06g12310 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr6 6647388 6652006 - CDS,three_prime_UTR,downstream 9 LOC_Os11g24780 expressed protein gene expressed protein chr11 13654305 13658032 - CDS 9 LOC_Os10g17950 TKL_IRAK_DUF26-lc.5 - DUF26 kinases have homology to DUF26 containing loci gene TKL_IRAK_DUF26-lc.5 - DUF26 kinases have homology to DUF26 containing loci chr10 9017198 9023285 - CDS,downstream 9 LOC_Os11g23220 myosin, putative, expressed gene myosin, putative, expressed chr11 12914256 12915819 - five_prime_UTR,downstream 9 LOC_Os08g16310 hypothetical protein gene hypothetical protein chr8 9954794 9956289 - CDS,promoter,downstream 9 LOC_Os08g35240 AP2 domain containing protein gene AP2 domain containing protein chr8 22233806 22234537 + CDS,promoter,downstream 9 LOC_Os04g33610 expressed protein gene expressed protein chr4 20186421 20187672 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g39000 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr11 22756778 22758095 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g09850 EF hand family protein, putative, expressed gene EF hand family protein, putative, expressed chr10 5342100 5346508 - five_prime_UTR,downstream 9 LOC_Os08g34430 conserved hypothetical protein gene conserved hypothetical protein chr8 21609373 21610116 - CDS,promoter 9 LOC_Os04g46830 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr4 27568228 27569394 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g37250 hypothetical protein gene hypothetical protein chr2 22504029 22504679 - CDS,promoter,downstream 9 LOC_Os12g30940 OsFBX445 - F-box domain containing protein gene OsFBX445 - F-box domain containing protein chr12 18553975 18556362 - CDS,downstream 9 LOC_Os09g10340 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 5642294 5644523 - CDS 9 LOC_Os03g42720 hypothetical protein gene hypothetical protein chr3 23783490 23785930 + CDS 9 LOC_Os12g30824 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr12 18481279 18500136 - CDS 9 LOC_Os08g32840 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed gene bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed chr8 20348392 20351041 + CDS,three_prime_UTR,promoter 9 LOC_Os11g43240 conserved hypothetical protein gene conserved hypothetical protein chr11 25610300 25610955 + CDS,promoter,downstream 9 LOC_Os08g28490 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 17387049 17389652 + CDS 9 LOC_Os12g41110 OsCML5 - Calmodulin-related calcium sensor protein, expressed gene OsCML5 - Calmodulin-related calcium sensor protein, expressed chr12 25428984 25429913 + five_prime_UTR,promoter,downstream 9 LOC_Os03g08840 zinc finger protein, putative, expressed gene zinc finger protein, putative, expressed chr3 4572150 4574552 + CDS,three_prime_UTR,downstream 9 LOC_Os10g37720 hydrolase, alpha/beta fold family protein, putative, expressed gene hydrolase, alpha/beta fold family protein, putative, expressed chr10 20110170 20114604 + five_prime_UTR 9 LOC_Os10g04640 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 2214353 2218695 + CDS,promoter 9 LOC_Os10g07210 hsp20/alpha crystallin family protein, putative, expressed gene hsp20/alpha crystallin family protein, putative, expressed chr10 3784691 3786374 - CDS,three_prime_UTR 9 LOC_Os01g67680 hypothetical protein gene hypothetical protein chr1 39327762 39328574 - CDS,promoter,downstream 9 LOC_Os11g01480 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr11 280472 282849 - five_prime_UTR,CDS,downstream 9 LOC_Os05g51820 helix-loop-helix DNA-binding protein, putative gene helix-loop-helix DNA-binding protein, putative chr5 29687102 29687880 + CDS,promoter,downstream 9 LOC_Os09g36960 conserved hypothetical protein gene conserved hypothetical protein chr9 21320178 21320582 + CDS,promoter,downstream 9 LOC_Os01g21780 hypothetical protein gene hypothetical protein chr1 12219322 12223273 + CDS,promoter 9 LOC_Os08g13100 hypothetical protein gene hypothetical protein chr8 7779978 7781430 - CDS,downstream 9 LOC_Os07g05500 hypothetical protein gene hypothetical protein chr7 2564441 2566275 + CDS,downstream 9 LOC_Os11g31420 expressed protein gene expressed protein chr11 17871580 17876696 - five_prime_UTR,downstream 9 LOC_Os03g57830 hypothetical protein gene hypothetical protein chr3 32941084 32943765 - CDS 9 LOC_Os07g16740 conserved hypothetical protein gene conserved hypothetical protein chr7 9819741 9820352 + CDS,downstream 9 LOC_Os12g12600 dirigent, putative, expressed gene dirigent, putative, expressed chr12 6944096 6947124 + five_prime_UTR,CDS,promoter 9 LOC_Os04g40460 cytochrome P450, putative gene cytochrome P450, putative chr4 23858741 23861915 - CDS 9 LOC_Os02g12300 pectate lyase precursor, putative, expressed gene pectate lyase precursor, putative, expressed chr2 6399355 6402186 - CDS 9 LOC_Os03g61270 OsMan04 - Endo-Beta-Mannanase, expressed gene OsMan04 - Endo-Beta-Mannanase, expressed chr3 34784895 34786739 + five_prime_UTR,promoter 9 LOC_Os02g04000 OsFBX37 - F-box domain containing protein gene OsFBX37 - F-box domain containing protein chr2 1731654 1732793 + CDS,promoter,downstream 9 LOC_Os09g26970 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 16391869 16400321 + CDS 9 LOC_Os01g56380 decarboxylase, putative, expressed gene decarboxylase, putative, expressed chr1 32499969 32501913 - five_prime_UTR,downstream 9 LOC_Os04g20420 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr4 11412124 11413736 - CDS,three_prime_UTR 9 LOC_Os08g03250 hypothetical protein gene hypothetical protein chr8 1507806 1508339 - CDS,promoter 9 LOC_Os05g09680 acid phosphatase family, putative gene acid phosphatase family, putative chr5 5465297 5468622 - CDS,promoter 9 LOC_Os01g37860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 21187684 21193343 - CDS,downstream 9 LOC_Os10g25040 red chlorophyll catabolite reductase, putative, expressed gene red chlorophyll catabolite reductase, putative, expressed chr10 12819719 12823410 - five_prime_UTR,downstream 9 LOC_Os09g36160 LRP1, putative, expressed gene LRP1, putative, expressed chr9 20837886 20839811 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os10g08980 zeaxanthin cleavage dioxygenase, chromoplast precursor, putative gene zeaxanthin cleavage dioxygenase, chromoplast precursor, putative chr10 4873657 4876512 + CDS 9 LOC_Os03g52570 glycerol-3-phosphate acyltransferase, putative gene glycerol-3-phosphate acyltransferase, putative chr3 30144787 30146603 - CDS,promoter,downstream 9 LOC_Os06g50990 conserved hypothetical protein gene conserved hypothetical protein chr6 30856610 30858465 + CDS,promoter,downstream 9 LOC_Os10g42490 homeobox and START domains containing protein, putative, expressed gene homeobox and START domains containing protein, putative, expressed chr10 22838932 22844675 - CDS,downstream 9 LOC_Os10g04890 expressed protein gene expressed protein chr10 2373592 2377611 + five_prime_UTR,CDS,promoter 9 LOC_Os01g70660 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr1 40901450 40906395 - CDS 9 LOC_Os12g13270 expressed protein gene expressed protein chr12 7372403 7382001 - CDS 9 LOC_Os02g44760 hypothetical protein gene hypothetical protein chr2 27109727 27110312 - CDS,downstream 9 LOC_Os07g36690 CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed gene CSLF2 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed chr7 21969348 21972443 + five_prime_UTR,promoter 9 LOC_Os01g39640 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 22359851 22361261 + CDS,promoter 9 LOC_Os07g05410 hypothetical protein gene hypothetical protein chr7 2483921 2485009 - CDS 9 LOC_Os09g36140 RNA recognition motif 2 domain containing protein, expressed gene RNA recognition motif 2 domain containing protein, expressed chr9 20810885 20812689 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g44230 hypothetical protein gene hypothetical protein chr11 26252305 26254487 + CDS,promoter,downstream 9 LOC_Os05g38080 hypothetical protein gene hypothetical protein chr5 22269065 22269938 - CDS,downstream 9 LOC_Os11g15250 THION31 - Plant thionin family protein precursor, expressed gene THION31 - Plant thionin family protein precursor, expressed chr11 8607349 8607734 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g23620 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr9 14028431 14030003 + three_prime_UTR,promoter,downstream 9 LOC_Os09g30320 BURP domain containing protein, expressed gene BURP domain containing protein, expressed chr9 18455838 18457654 + CDS,three_prime_UTR 9 LOC_Os01g16360 disease resistance protein, putative gene disease resistance protein, putative chr1 9287840 9288082 + CDS,downstream 9 LOC_Os01g72740 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 42205260 42207469 + CDS,downstream 9 LOC_Os02g47060 OsWRKY66 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY66 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr2 28720914 28725064 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g51172 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed gene Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed chr4 30112737 30120480 - five_prime_UTR,CDS 9 LOC_Os08g16910 dehydrogenase, putative, expressed gene dehydrogenase, putative, expressed chr8 10354408 10357379 - CDS,downstream 9 LOC_Os08g14109 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr8 8436327 8444923 + CDS 9 LOC_Os03g25990 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 14893361 14895031 + CDS,three_prime_UTR 9 LOC_Os07g36560 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr7 21853734 21855904 + five_prime_UTR,CDS,promoter 9 LOC_Os04g04390 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 2066644 2080265 - CDS 9 LOC_Os07g30600 male sterility protein, putative gene male sterility protein, putative chr7 18105232 18110258 + CDS 9 LOC_Os04g41780 hypothetical protein gene hypothetical protein chr4 24571160 24571742 + CDS,promoter,downstream 9 LOC_Os08g43250 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr8 27342580 27344349 - five_prime_UTR,downstream 9 LOC_Os10g34920 secretory protein, putative, expressed gene secretory protein, putative, expressed chr10 18566046 18567078 - CDS,three_prime_UTR,promoter 9 LOC_Os03g04210 IQ calmodulin-binding motif family protein, putative, expressed gene IQ calmodulin-binding motif family protein, putative, expressed chr3 1935265 1936266 + CDS,promoter,downstream 9 LOC_Os04g49790 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr4 29497342 29502836 - CDS 9 LOC_Os11g41080 hypothetical protein gene hypothetical protein chr11 24130784 24132404 - CDS,promoter 9 LOC_Os01g19430 3-5 exonuclease domain-containing protein, putative, expressed gene 3-5 exonuclease domain-containing protein, putative, expressed chr1 10989751 10990593 - CDS,three_prime_UTR,downstream 9 LOC_Os12g11940 disease resistance family protein, putative gene disease resistance family protein, putative chr12 6516759 6519439 - CDS,downstream 9 LOC_Os08g39940 polygalacturonase inhibitor 1 precursor, putative gene polygalacturonase inhibitor 1 precursor, putative chr8 25306714 25309030 - CDS,promoter,downstream 9 LOC_Os10g10560 invertase/pectin methylesterase inhibitor family protein, putative gene invertase/pectin methylesterase inhibitor family protein, putative chr10 5850144 5850800 - CDS,promoter,downstream 9 LOC_Os01g18744 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr1 10560304 10564301 - CDS 9 LOC_Os11g31120 hypothetical protein gene hypothetical protein chr11 17648388 17649446 - CDS,downstream 9 LOC_Os05g43930 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr5 25501929 25503649 + five_prime_UTR,CDS,promoter 9 LOC_Os11g43180 expressed protein gene expressed protein chr11 25577920 25582071 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g47560 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28216395 28217489 + five_prime_UTR,promoter 9 LOC_Os12g12900 hypothetical protein gene hypothetical protein chr12 7136865 7137817 + CDS,promoter,downstream 9 LOC_Os10g26260 conserved hypothetical protein gene conserved hypothetical protein chr10 13523342 13526048 - CDS 9 LOC_Os10g39260 aspartic proteinase nepenthesin, putative, expressed gene aspartic proteinase nepenthesin, putative, expressed chr10 20885361 20886872 + CDS,three_prime_UTR 9 LOC_Os09g32150 expressed protein gene expressed protein chr9 19185443 19187556 - CDS,three_prime_UTR,promoter 9 LOC_Os04g30020 expressed protein gene expressed protein chr4 17740574 17740976 + CDS,three_prime_UTR,downstream 9 LOC_Os03g49690 hypothetical protein gene hypothetical protein chr3 28287580 28288536 + CDS,promoter,downstream 9 LOC_Os07g28110 cytochrome P450, putative gene cytochrome P450, putative chr7 16395192 16396706 + CDS,downstream 9 LOC_Os03g38170 expressed protein gene expressed protein chr3 21189825 21197702 + five_prime_UTR,promoter 9 LOC_Os03g04620 CCT motif family protein, expressed gene CCT motif family protein, expressed chr3 2158327 2162356 - five_prime_UTR,CDS,downstream 9 LOC_Os06g19530 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed gene oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed chr6 11115721 11117277 - CDS 9 LOC_Os12g24800 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed gene 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed chr12 14230243 14232243 - CDS 9 LOC_Os09g28200 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr9 17108288 17110076 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g01120 homeobox domain containing protein gene homeobox domain containing protein chr12 63393 64004 + CDS,promoter 9 LOC_Os11g47290 receptor kinase, putative gene receptor kinase, putative chr11 27908076 27915246 - CDS 9 LOC_Os02g56920 WAX2, putative, expressed gene WAX2, putative, expressed chr2 34883686 34888004 - CDS 9 LOC_Os06g04930 expressed protein gene expressed protein chr6 2169891 2172401 - CDS,three_prime_UTR,promoter 9 LOC_Os06g02840 hypothetical protein gene hypothetical protein chr6 1043888 1044487 + CDS,promoter,downstream 9 LOC_Os09g29710 beta-expansin precursor, putative, expressed gene beta-expansin precursor, putative, expressed chr9 18066433 18067461 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g16970 carnitine racemase like protein, putative, expressed gene carnitine racemase like protein, putative, expressed chr11 9404978 9406089 - three_prime_UTR,promoter 9 LOC_Os08g14400 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr8 8638194 8639764 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g45560 MBTB68 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB68 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr11 27105063 27107669 - CDS,downstream 9 LOC_Os05g36990 ATOFP18/OFP18, putative, expressed gene ATOFP18/OFP18, putative, expressed chr5 21547832 21549046 - three_prime_UTR,promoter 9 LOC_Os04g58530 hypothetical protein gene hypothetical protein chr4 34621816 34622675 + CDS,downstream 9 LOC_Os09g36060 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr9 20763721 20768090 + five_prime_UTR,CDS,promoter 9 LOC_Os01g34920 beta-galactosidase precursor, putative, expressed gene beta-galactosidase precursor, putative, expressed chr1 19294524 19301093 - five_prime_UTR,downstream 9 LOC_Os12g14100 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr12 7994789 7997773 + CDS 9 LOC_Os10g31460 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 16415095 16424011 - five_prime_UTR,CDS 9 LOC_Os01g38130 hypothetical protein gene hypothetical protein chr1 21348793 21349334 + CDS,promoter 9 LOC_Os09g12200 hypothetical protein gene hypothetical protein chr9 6896777 6897156 + CDS,downstream 9 LOC_Os01g67790 F-box protein interaction domain containing protein gene F-box protein interaction domain containing protein chr1 39400138 39400620 + CDS,promoter 9 LOC_Os08g33800 MYB family transcription factor, putative gene MYB family transcription factor, putative chr8 21152811 21155062 + CDS,promoter,downstream 9 LOC_Os05g16920 SHR5-receptor-like kinase, putative gene SHR5-receptor-like kinase, putative chr5 9643859 9644645 + CDS 9 LOC_Os01g05390 hypothetical protein gene hypothetical protein chr1 2546915 2547298 + CDS,promoter,downstream 9 LOC_Os01g12580 late embryogenesis abundant protein, putative, expressed gene late embryogenesis abundant protein, putative, expressed chr1 6921082 6922336 - five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os10g07548 wall-associated receptor kinase-like 4 precursor, putative, expressed gene wall-associated receptor kinase-like 4 precursor, putative, expressed chr10 4050255 4054668 - CDS,downstream 9 LOC_Os09g08550 OsFBX308 - F-box domain containing protein, expressed gene OsFBX308 - F-box domain containing protein, expressed chr9 4461316 4464028 + CDS,downstream 9 LOC_Os04g10800 inorganic phosphate transporter, putative gene inorganic phosphate transporter, putative chr4 5860617 5863619 + CDS 9 LOC_Os08g17990 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 11024507 11030593 + CDS,promoter,downstream 9 LOC_Os04g02620 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed gene oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed chr4 980095 982621 + five_prime_UTR,CDS,promoter 9 LOC_Os04g49840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 29524035 29527387 - CDS,downstream 9 LOC_Os01g43490 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr1 24898121 24900769 - CDS,downstream 9 LOC_Os04g34600 abscisic stress-ripening, putative, expressed gene abscisic stress-ripening, putative, expressed chr4 20762879 20764112 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os09g36390 hypothetical protein gene hypothetical protein chr9 20997164 20998417 - CDS,promoter,downstream 9 LOC_Os11g31000 hypothetical protein gene hypothetical protein chr11 17570143 17570915 - CDS,promoter,downstream 9 LOC_Os02g13870 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr2 7515989 7519336 - five_prime_UTR,downstream 9 LOC_Os07g32610 expressed protein gene expressed protein chr7 19443185 19444951 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os06g45470 hypothetical protein gene hypothetical protein chr6 27492243 27492452 - CDS,downstream 9 LOC_Os07g40020 GRAS family transcription factor domain containing protein, expressed gene GRAS family transcription factor domain containing protein, expressed chr7 24013027 24017428 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g35340 OsGrx_C11 - glutaredoxin subgroup III, expressed gene OsGrx_C11 - glutaredoxin subgroup III, expressed chr12 21446659 21447622 + CDS,three_prime_UTR 9 LOC_Os03g62060 hydrolase, putative, expressed gene hydrolase, putative, expressed chr3 35153254 35156086 + CDS,three_prime_UTR,downstream 9 LOC_Os06g11660 phosphate-induced protein 1 conserved region domain containing protein, expressed gene phosphate-induced protein 1 conserved region domain containing protein, expressed chr6 6179309 6180640 - three_prime_UTR,CDS,promoter 9 LOC_Os11g16960 carnitine racemase like protein, putative, expressed gene carnitine racemase like protein, putative, expressed chr11 9401753 9404563 - five_prime_UTR,CDS,downstream 9 LOC_Os03g02900 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr3 1151916 1153874 + five_prime_UTR,promoter 9 LOC_Os03g07480 sucrose transporter, putativ, expressed gene sucrose transporter, putativ, expressed chr3 3796687 3803128 - five_prime_UTR,CDS,downstream 9 LOC_Os05g32300 hypothetical protein gene hypothetical protein chr5 18767753 18768553 + CDS,promoter 9 LOC_Os10g07040 chalcone synthase, putative gene chalcone synthase, putative chr10 3695774 3697751 + CDS,promoter,downstream 9 LOC_Os06g02730 aspartic proteinase nepenthesin-2 precursor, putative, expressed gene aspartic proteinase nepenthesin-2 precursor, putative, expressed chr6 977317 978810 - five_prime_UTR,downstream 9 LOC_Os07g15320 leaf senescence related protein, putative, expressed gene leaf senescence related protein, putative, expressed chr7 8827931 8830125 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os11g18750 hypothetical protein gene hypothetical protein chr11 10632001 10632870 + CDS,downstream 9 LOC_Os06g40330 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr6 24004102 24011311 - CDS,downstream 9 LOC_Os05g25150 transferase family protein, putative gene transferase family protein, putative chr5 14515470 14516903 + CDS,downstream 9 LOC_Os07g03580 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1431684 1432407 + CDS,three_prime_UTR 9 LOC_Os04g33730 hypothetical protein gene hypothetical protein chr4 20246312 20247375 - CDS,downstream 9 LOC_Os03g46040 expressed protein gene expressed protein chr3 26016832 26020928 + CDS,three_prime_UTR,downstream 9 LOC_Os06g07250 jacalin-like lectin domain containing protein, expressed gene jacalin-like lectin domain containing protein, expressed chr6 3469796 3474964 + CDS 9 LOC_Os02g12820 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr2 6746929 6749884 - CDS 9 LOC_Os12g02470 OsWRKY65 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY65 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr12 835516 837755 - CDS,promoter,downstream 9 LOC_Os08g40040 hypothetical protein gene hypothetical protein chr8 25352083 25357419 - CDS,promoter 9 LOC_Os03g25364 hypothetical protein gene hypothetical protein chr3 14500005 14501520 + CDS,downstream 9 LOC_Os02g13460 receptor-like protein kinase 2 precursor, putative gene receptor-like protein kinase 2 precursor, putative chr2 7183462 7187529 - CDS 9 LOC_Os12g06290 expressed protein gene expressed protein chr12 3006572 3008856 - three_prime_UTR,promoter 9 LOC_Os07g17010 chalcone synthase, putative, expressed gene chalcone synthase, putative, expressed chr7 10017732 10019742 + CDS,three_prime_UTR 9 LOC_Os12g40890 OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed chr12 25277210 25282627 - five_prime_UTR 9 LOC_Os11g19160 beta-D-xylosidase, putative, expressed gene beta-D-xylosidase, putative, expressed chr11 10929699 10933923 + CDS,promoter 9 LOC_Os05g33190 endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed gene endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed chr5 19402617 19405391 + CDS 9 LOC_Os05g14490 hypothetical protein gene hypothetical protein chr5 8181190 8183946 - CDS 9 LOC_Os05g09200 hypothetical protein gene hypothetical protein chr5 5140726 5143263 - CDS,promoter 9 LOC_Os06g08710 receptor-like protein kinase precursor, putative gene receptor-like protein kinase precursor, putative chr6 4338308 4341792 - CDS,promoter 9 LOC_Os11g38610 expressed protein gene expressed protein chr11 22410270 22418418 + CDS,three_prime_UTR,downstream 9 LOC_Os01g23990 expressed protein gene expressed protein chr1 13507291 13507856 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os09g21370 cysteine proteinase EP-B 1 precursor, putative, expressed gene cysteine proteinase EP-B 1 precursor, putative, expressed chr9 12896271 12898549 - CDS,downstream 9 LOC_Os11g40740 expressed protein gene expressed protein chr11 23900827 23901435 - CDS,downstream 9 LOC_Os09g09550 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr9 5155336 5157006 - CDS,promoter,downstream 9 LOC_Os01g11730 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 6339836 6343345 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g40530 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 24574513 24576658 - CDS,three_prime_UTR,downstream 9 LOC_Os01g12250 expressed protein gene expressed protein chr1 6693004 6695795 - three_prime_UTR,promoter 9 LOC_Os11g45510 expressed protein gene expressed protein chr11 27081942 27083912 - CDS,downstream 9 LOC_Os02g18510 stripe rust resistance protein Yr10, putative gene stripe rust resistance protein Yr10, putative chr2 10776282 10780756 - CDS 9 LOC_Os06g11000 hypothetical protein gene hypothetical protein chr6 5756270 5757844 - CDS,promoter,downstream 9 LOC_Os01g10990 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr1 5860816 5862794 + five_prime_UTR,CDS,promoter 9 LOC_Os09g23440 hypothetical protein gene hypothetical protein chr9 13931139 13931372 + CDS,promoter,downstream 9 LOC_Os08g24600 hypothetical protein gene hypothetical protein chr8 14872605 14873285 + CDS,downstream 9 LOC_Os11g32960 zinc finger DHHC domain-containing protein, putative, expressed gene zinc finger DHHC domain-containing protein, putative, expressed chr11 19015340 19017916 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os07g15370 metal transporter Nramp6, putative, expressed gene metal transporter Nramp6, putative, expressed chr7 8870442 8877911 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g19060 BABY BOOM 1, putative, expressed gene BABY BOOM 1, putative, expressed chr11 10857653 10863111 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g28320 hypothetical protein gene hypothetical protein chr4 16592234 16592437 + CDS,promoter,downstream 9 LOC_Os09g38610 ZOS9-18 - C2H2 zinc finger protein, expressed gene ZOS9-18 - C2H2 zinc finger protein, expressed chr9 22207162 22208021 - CDS,promoter,downstream 9 LOC_Os11g42900 conserved hypothetical protein gene conserved hypothetical protein chr11 25374512 25380909 - CDS 9 LOC_Os01g14320 hypothetical protein gene hypothetical protein chr1 8022787 8023935 - CDS,promoter,downstream 9 LOC_Os03g25360 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 14493566 14495051 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g41830 SMP-30/Gluconolaconase/LRE-like region containing protein gene SMP-30/Gluconolaconase/LRE-like region containing protein chr6 25084540 25085529 + CDS 9 LOC_Os04g34040 hypothetical protein gene hypothetical protein chr4 20445664 20449397 - CDS,promoter 9 LOC_Os05g46830 proline-rich protein, putative, expressed gene proline-rich protein, putative, expressed chr5 27056477 27057680 + CDS,three_prime_UTR,downstream 9 LOC_Os12g27750 OsFBX441 - F-box domain containing protein gene OsFBX441 - F-box domain containing protein chr12 16361924 16363303 + CDS,promoter 9 LOC_Os11g30310 reticuline oxidase-like protein precursor, putative gene reticuline oxidase-like protein precursor, putative chr11 17133786 17135408 - CDS,downstream 9 LOC_Os12g40730 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr12 25180945 25191808 - five_prime_UTR,CDS,downstream 9 LOC_Os12g28070 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr12 16569228 16575498 - CDS,downstream 9 LOC_Os10g01430 hypothetical protein gene hypothetical protein chr10 258994 259482 + CDS,downstream 9 LOC_Os02g12790 GATA zinc finger domain containing protein, expressed gene GATA zinc finger domain containing protein, expressed chr2 6705604 6707734 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g19340 lipase, putative, expressed gene lipase, putative, expressed chr11 11104843 11106500 - five_prime_UTR,CDS,downstream 9 LOC_Os06g03050 expressed protein gene expressed protein chr6 1124351 1126805 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g01500 expressed protein gene expressed protein chr4 345608 346612 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g16840 expressed protein gene expressed protein chr3 9345777 9346683 - CDS,promoter 9 LOC_Os02g53920 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 33007491 33008047 - CDS 9 LOC_Os11g40860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 23975167 23979564 + CDS,promoter,downstream 9 LOC_Os03g25010 GDSL-like lipase/acylhydrolase, putative gene GDSL-like lipase/acylhydrolase, putative chr3 14275164 14278267 + CDS,promoter 9 LOC_Os01g52760 expressed protein gene expressed protein chr1 30350785 30357213 + CDS,promoter 9 LOC_Os07g10030 expressed protein gene expressed protein chr7 5347907 5352631 - CDS 9 LOC_Os06g08880 glutamate receptor 2.7 precursor, putative, expressed gene glutamate receptor 2.7 precursor, putative, expressed chr6 4458008 4462883 + CDS 9 LOC_Os09g13400 expressed protein gene expressed protein chr9 7740162 7743069 - five_prime_UTR,CDS 9 LOC_Os04g59360 csAtPR5, putative gene csAtPR5, putative chr4 35098087 35101057 + CDS,downstream 9 LOC_Os01g11460 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr1 6170722 6172186 - CDS,three_prime_UTR,promoter 9 LOC_Os11g03810 carboxyl-terminal proteinase, putative gene carboxyl-terminal proteinase, putative chr11 1500738 1504746 + CDS 9 LOC_Os09g22520 hypothetical protein gene hypothetical protein chr9 13582619 13583644 - CDS,downstream 9 LOC_Os02g29160 ankyrin, putative, expressed gene ankyrin, putative, expressed chr2 17271383 17284330 - CDS,three_prime_UTR,promoter 9 LOC_Os04g45520 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr4 26746325 26747511 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g02780 protein kinase family protein, putative, expressed gene protein kinase family protein, putative, expressed chr2 1050786 1056830 - five_prime_UTR,CDS,downstream 9 LOC_Os03g32180 polygalacturonase inhibitor 1 precursor, putative gene polygalacturonase inhibitor 1 precursor, putative chr3 18408845 18410264 + CDS 9 LOC_Os03g60639 expressed protein gene expressed protein chr3 34457183 34457972 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g31080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 16189728 16199107 + CDS,promoter 9 LOC_Os06g42310 beta-galactosidase precursor, putative gene beta-galactosidase precursor, putative chr6 25409604 25417249 - CDS,downstream 9 LOC_Os04g04750 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 2277477 2280594 - CDS,promoter,downstream 9 LOC_Os11g18320 hypothetical protein gene hypothetical protein chr11 10324238 10333911 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os03g56030 hypothetical protein gene hypothetical protein chr3 31890929 31893105 - CDS,downstream 9 LOC_Os01g49950 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 28698851 28708982 + CDS,downstream 9 LOC_Os11g34110 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed gene heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed chr11 19490695 19497222 - five_prime_UTR,downstream 9 LOC_Os04g28410 expressed protein gene expressed protein chr4 16635429 16636301 + five_prime_UTR,CDS,promoter 9 LOC_Os10g30120 laccase-9 precursor, putative gene laccase-9 precursor, putative chr10 15577236 15577626 + CDS,promoter 9 LOC_Os04g26550 expressed protein gene expressed protein chr4 15490233 15491285 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g10940 exo70 exocyst complex subunit family protein gene exo70 exocyst complex subunit family protein chr7 5986858 5996196 + CDS 9 LOC_Os06g06200 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr6 2869178 2871701 - CDS 9 LOC_Os01g03420 seven in absentia protein family protein, putative gene seven in absentia protein family protein, putative chr1 1374169 1376242 + CDS,promoter 9 LOC_Os07g33280 expressed protein gene expressed protein chr7 19898217 19899045 + three_prime_UTR 9 LOC_Os10g21670 dehydration stress-induced protein, putative, expressed gene dehydration stress-induced protein, putative, expressed chr10 11039071 11039930 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g44970 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr5 26080725 26084942 + CDS,promoter 9 LOC_Os02g21640 expressed protein gene expressed protein chr2 12852007 12852960 + three_prime_UTR,downstream 9 LOC_Os11g10384 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 5627583 5636140 - CDS 9 LOC_Os02g47920 ZOS2-16 - C2H2 zinc finger protein gene ZOS2-16 - C2H2 zinc finger protein chr2 29312762 29314803 + CDS,promoter 9 LOC_Os08g32360 expressed protein gene expressed protein chr8 20036108 20038612 + CDS 9 LOC_Os05g16460 hypothetical protein gene hypothetical protein chr5 9345425 9346087 - CDS,downstream 9 LOC_Os08g02220 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr8 762215 764126 + three_prime_UTR,downstream 9 LOC_Os01g28570 pentatricopeptide, putative gene pentatricopeptide, putative chr1 15989549 15990289 - CDS,downstream 9 LOC_Os08g36740 bHelix-loop-helix transcription factor, putative gene bHelix-loop-helix transcription factor, putative chr8 23191822 23192562 - CDS,promoter,downstream 9 LOC_Os02g18920 hypothetical protein gene hypothetical protein chr2 11050815 11051625 + CDS,downstream 9 LOC_Os06g11700 phosphate-induced protein 1 conserved region domain containing protein, expressed gene phosphate-induced protein 1 conserved region domain containing protein, expressed chr6 6198475 6199742 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g35960 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr6 20995267 20997870 - three_prime_UTR,promoter 9 LOC_Os05g37030 expressed protein gene expressed protein chr5 21578232 21579074 - three_prime_UTR,promoter,downstream 9 LOC_Os06g50600 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr6 30619818 30623221 - five_prime_UTR,downstream 9 LOC_Os01g41260 OsFBD2 - F-box and FBD domain containing protein gene OsFBD2 - F-box and FBD domain containing protein chr1 23350802 23352891 + CDS,promoter,downstream 9 LOC_Os01g46790 conserved hypothetical protein gene conserved hypothetical protein chr1 26678429 26679273 - CDS 9 LOC_Os12g30300 CAMK_CAMK_like.48 - CAMK includes calcium/calmodulin depedent protein kinases gene CAMK_CAMK_like.48 - CAMK includes calcium/calmodulin depedent protein kinases chr12 18143502 18145416 + CDS 9 LOC_Os03g07640 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 3882005 3882634 - CDS,promoter,downstream 9 LOC_Os12g40630 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr12 25109231 25114650 + CDS,promoter,downstream 9 LOC_Os07g34140 chalcone synthase, putative gene chalcone synthase, putative chr7 20419145 20420523 - CDS,promoter 9 LOC_Os06g40320 hypothetical protein gene hypothetical protein chr6 24000342 24002191 + CDS 9 LOC_Os01g71340 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41345531 41347368 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g43810 hypothetical protein gene hypothetical protein chr4 25753037 25756545 + CDS,downstream 9 LOC_Os03g61440 uncharacterized Cys-rich domain containing protein, putative gene uncharacterized Cys-rich domain containing protein, putative chr3 34853630 34854292 - CDS,promoter,downstream 9 LOC_Os02g40760 hypothetical protein gene hypothetical protein chr2 24695105 24695809 - CDS,promoter,downstream 9 LOC_Os01g41240 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr1 23342262 23344417 + five_prime_UTR,CDS,promoter 9 LOC_Os08g24370 OsFBX287 - F-box domain containing protein gene OsFBX287 - F-box domain containing protein chr8 14705644 14707194 - CDS,promoter 9 LOC_Os10g07970 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed gene anthocyanidin 5,3-O-glucosyltransferase, putative, expressed chr10 4267880 4269564 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g65490 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr1 38011755 38013256 - five_prime_UTR,downstream 9 LOC_Os10g23090 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr10 11970419 11972050 + three_prime_UTR 9 LOC_Os09g31140 ZOS9-16 - C2H2 zinc finger protein, expressed gene ZOS9-16 - C2H2 zinc finger protein, expressed chr9 18734015 18738476 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g53090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 32477526 32481145 - CDS,downstream 9 LOC_Os05g35690 GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed gene GASR6 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed chr5 21135542 21136433 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g03100 HECT-domain domain containing protein, expressed gene HECT-domain domain containing protein, expressed chr5 1223947 1230041 + five_prime_UTR,promoter 9 LOC_Os08g37210 patatin, putative, expressed gene patatin, putative, expressed chr8 23500229 23502596 - five_prime_UTR,CDS,downstream 9 LOC_Os09g16240 expressed protein gene expressed protein chr9 9909745 9916710 - CDS,downstream 9 LOC_Os08g01450 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr8 287778 289301 - CDS,downstream 9 LOC_Os01g71410 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41374129 41375254 + CDS,promoter,downstream 9 LOC_Os03g63810 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr3 36032033 36036691 + CDS,promoter 9 LOC_Os05g50340 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr5 28782800 28783405 - CDS,promoter,downstream 9 LOC_Os01g43110 expressed protein gene expressed protein chr1 24591468 24595176 - CDS 9 LOC_Os01g07680 hypothetical protein gene hypothetical protein chr1 3693855 3694301 - CDS,promoter 9 LOC_Os02g30810 OsSAUR10 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR10 - Auxin-responsive SAUR gene family member, expressed chr2 18365573 18367023 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os06g40230 hypothetical protein gene hypothetical protein chr6 23962771 23965178 + CDS,promoter 9 LOC_Os10g24340 hypothetical protein gene hypothetical protein chr10 12402571 12403686 + CDS 9 LOC_Os03g47640 conserved hypothetical protein gene conserved hypothetical protein chr3 26971657 26979129 + CDS,promoter,downstream 9 LOC_Os05g23230 expressed protein gene expressed protein chr5 13201109 13202884 + CDS,three_prime_UTR,downstream 9 LOC_Os07g48460 stress responsive protein, putative, expressed gene stress responsive protein, putative, expressed chr7 28991722 28993943 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g64100 expressed protein gene expressed protein chr3 36217199 36218012 - five_prime_UTR,CDS 9 LOC_Os11g02520 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr11 781359 782512 - CDS 9 LOC_Os01g18360 OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA4 - Auxin-responsive Aux/IAA gene family member, expressed chr1 10311317 10313802 + five_prime_UTR,CDS,promoter 9 LOC_Os08g41510 hypothetical protein gene hypothetical protein chr8 26220073 26223424 + CDS,promoter 9 LOC_Os02g09880 hypothetical protein gene hypothetical protein chr2 5112712 5112942 + CDS,promoter,downstream 9 LOC_Os09g32120 hypothetical protein gene hypothetical protein chr9 19173967 19178953 + CDS,promoter 9 LOC_Os11g43250 Leucine Rich Repeat family protein, expressed gene Leucine Rich Repeat family protein, expressed chr11 25616481 25619697 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os02g51799 MYB family transcription factor, putative gene MYB family transcription factor, putative chr2 31718951 31720452 - CDS,promoter 9 LOC_Os02g41510 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 24872906 24874065 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g46100 cupin domain containing protein, expressed gene cupin domain containing protein, expressed chr3 26068517 26070950 - CDS,three_prime_UTR,downstream 9 LOC_Os01g21650 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr1 12128568 12132172 - CDS,promoter 9 LOC_Os11g05430 conserved hypothetical protein gene conserved hypothetical protein chr11 2438566 2439788 + CDS,downstream 9 LOC_Os09g38000 no apical meristem protein, putative gene no apical meristem protein, putative chr9 21902233 21904578 + CDS,promoter,downstream 9 LOC_Os03g12570 expressed protein gene expressed protein chr3 6656604 6667721 + CDS,three_prime_UTR,downstream 9 LOC_Os01g38910 cysteine-rich receptor-like protein kinase 10 precursor, putative gene cysteine-rich receptor-like protein kinase 10 precursor, putative chr1 21846449 21847039 - CDS,promoter,downstream 9 LOC_Os08g07080 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr8 3959466 3964669 + five_prime_UTR,promoter 9 LOC_Os01g26340 dirigent, putative gene dirigent, putative chr1 14941320 14942427 + CDS,promoter 9 LOC_Os03g47650 ankyrin, putative, expressed gene ankyrin, putative, expressed chr3 26981375 26988601 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g14760 expressed protein gene expressed protein chr1 8246630 8247504 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g07060 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr10 3715395 3716226 + CDS,downstream 9 LOC_Os07g20130 MATH domain containing protein, expressed gene MATH domain containing protein, expressed chr7 11626414 11627391 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g46140 expressed protein gene expressed protein chr6 27961692 27963225 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os10g05490 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 2708081 2710891 - CDS,promoter,downstream 9 LOC_Os02g07170 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 3682189 3684123 - five_prime_UTR,CDS,downstream 9 LOC_Os07g40850 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 24469110 24470121 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g14004 unknown gene unknown chr10 7628599 7628808 + CDS,promoter,downstream 9 LOC_Os10g31320 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 16354776 16355705 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g39620 ATOZI1, putative, expressed gene ATOZI1, putative, expressed chr2 23898025 23899134 + five_prime_UTR,CDS,promoter 9 LOC_Os06g03220 expressed protein gene expressed protein chr6 1217465 1218978 - five_prime_UTR,CDS,downstream 9 LOC_Os02g33930 conserved hypothetical protein gene conserved hypothetical protein chr2 20215156 20218546 - CDS 9 LOC_Os04g08240 conserved hypothetical protein gene conserved hypothetical protein chr4 4392845 4394371 - CDS,promoter,downstream 9 LOC_Os01g12070 endoglucanase precursor, putative, expressed gene endoglucanase precursor, putative, expressed chr1 6563673 6567151 - three_prime_UTR 9 LOC_Os03g28090 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr3 16149871 16152205 + CDS,three_prime_UTR 9 LOC_Os01g10000 hypothetical protein gene hypothetical protein chr1 5209468 5212292 - CDS,promoter 9 LOC_Os01g38700 nucleic acid binding protein, putative gene nucleic acid binding protein, putative chr1 21735023 21736281 - CDS,promoter,downstream 9 LOC_Os05g03250 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 1313932 1315923 + CDS,promoter 9 LOC_Os01g24570 fruit bromelain precursor, putative gene fruit bromelain precursor, putative chr1 13846966 13848010 - CDS,promoter,downstream 9 LOC_Os05g04410 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr5 2027764 2030185 + five_prime_UTR,CDS,promoter 9 LOC_Os04g50680 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr4 29810620 29812128 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g04584 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr5 2143764 2150254 + five_prime_UTR,CDS 9 LOC_Os04g50940 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr4 29971122 29974193 + CDS,five_prime_UTR 9 LOC_Os07g04590 hypothetical protein gene hypothetical protein chr7 2041486 2043186 - CDS,downstream 9 LOC_Os03g54244 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr3 31102410 31107049 + CDS,downstream 9 LOC_Os07g10340 hypothetical protein gene hypothetical protein chr7 5535963 5536181 - CDS,promoter,downstream 9 LOC_Os02g07430 OsMADS29 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS29 - MADS-box family gene with MIKCc type-box, expressed chr2 3833085 3837132 - CDS,downstream 9 LOC_Os08g35060 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr8 22101595 22102926 + CDS 9 LOC_Os01g11660 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 6287365 6291303 + five_prime_UTR,CDS,promoter 9 LOC_Os12g27340 hypothetical protein gene hypothetical protein chr12 16072064 16073551 + CDS,downstream 9 LOC_Os12g31160 MLA10, putative, expressed gene MLA10, putative, expressed chr12 18729381 18735475 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g21130 F-box protein PP2-B1, putative, expressed gene F-box protein PP2-B1, putative, expressed chr4 11885393 11889255 + CDS,promoter 9 LOC_Os11g44000 hypothetical protein gene hypothetical protein chr11 26112148 26114987 + CDS,promoter 9 LOC_Os10g02380 oxidoreductase, aldo/keto reductase family protein, putative, expressed gene oxidoreductase, aldo/keto reductase family protein, putative, expressed chr10 865365 869930 + five_prime_UTR,promoter 9 LOC_Os06g17580 conserved hypothetical protein gene conserved hypothetical protein chr6 10200821 10201936 - CDS,downstream 9 LOC_Os05g33150 CHIT6 - Chitinase family protein precursor, expressed gene CHIT6 - Chitinase family protein precursor, expressed chr5 19383382 19384976 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g22370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 11499817 11505384 - CDS 9 LOC_Os11g11240 hypothetical protein gene hypothetical protein chr11 6214250 6222435 + CDS,three_prime_UTR,downstream 9 LOC_Os01g34880 callose synthase, putative, expressed gene callose synthase, putative, expressed chr1 19257296 19259794 - CDS 9 LOC_Os10g07200 hsp20/alpha crystallin family protein, putative, expressed gene hsp20/alpha crystallin family protein, putative, expressed chr10 3778615 3780597 - five_prime_UTR,CDS,downstream 9 LOC_Os05g51810 hypothetical protein gene hypothetical protein chr5 29685674 29686674 - CDS,downstream 9 LOC_Os06g35880 hypothetical protein gene hypothetical protein chr6 20930635 20933472 - CDS,downstream 9 LOC_Os06g03390 expressed protein gene expressed protein chr6 1291194 1291907 + CDS,promoter 9 LOC_Os07g41320 COBRA-like protein precursor, putative, expressed gene COBRA-like protein precursor, putative, expressed chr7 24754456 24757231 - CDS 9 LOC_Os04g47890 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr4 28285239 28289125 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g04600 BTBA5 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed gene BTBA5 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed chr11 1950555 1953600 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os02g14810 conserved hypothetical protein gene conserved hypothetical protein chr2 8227855 8230367 - CDS 9 LOC_Os01g11270 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 6030025 6031833 - three_prime_UTR,promoter 9 LOC_Os01g68589 LTPL39 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL39 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr1 39838172 39839404 + five_prime_UTR,three_prime_UTR 9 LOC_Os10g33780 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr10 17817069 17818496 - five_prime_UTR,promoter,downstream 9 LOC_Os12g35020 hypothetical protein gene hypothetical protein chr12 21281744 21287450 + CDS 9 LOC_Os05g50350 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr5 28785400 28787790 - three_prime_UTR,promoter,downstream 9 LOC_Os12g10390 disease resistance protein, putative gene disease resistance protein, putative chr12 5497827 5499710 - CDS,downstream 9 LOC_Os10g24370 retrotransposon, putative, centromere-specific, expressed gene retrotransposon, putative, centromere-specific, expressed chr10 12409354 12416208 - CDS 9 LOC_Os07g01420 peroxidase precursor, putative gene peroxidase precursor, putative chr7 263525 264650 + CDS,promoter,downstream 9 LOC_Os09g23200 KANADI1, putative gene KANADI1, putative chr9 13757214 13764051 + CDS,promoter,downstream 9 LOC_Os09g29660 white-brown complex homolog protein 11, putative, expressed gene white-brown complex homolog protein 11, putative, expressed chr9 18033120 18038232 + CDS 9 LOC_Os08g19060 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 11377794 11380703 - CDS,promoter 9 LOC_Os11g25720 cytokinin-N-glucosyltransferase 1, putative, expressed gene cytokinin-N-glucosyltransferase 1, putative, expressed chr11 14199538 14211699 - CDS,three_prime_UTR,promoter 9 LOC_Os08g08160 expressed protein gene expressed protein chr8 4643763 4647711 - CDS,three_prime_UTR,downstream 9 LOC_Os12g37260 lipoxygenase 2.1, chloroplast precursor, putative, expressed gene lipoxygenase 2.1, chloroplast precursor, putative, expressed chr12 22821051 22826640 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g20100 glycerol-3-phosphate acyltransferase, putative, expressed gene glycerol-3-phosphate acyltransferase, putative, expressed chr5 11753211 11756311 - five_prime_UTR,CDS,downstream 9 LOC_Os04g55660 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr4 32947194 32949139 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os08g01670 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr8 388662 390196 - five_prime_UTR,downstream 9 LOC_Os08g37930 beta-expansin precursor, putative, expressed gene beta-expansin precursor, putative, expressed chr8 24019195 24019913 - CDS,promoter 9 LOC_Os07g45080 expressed protein gene expressed protein chr7 26910523 26911452 + CDS,promoter 9 LOC_Os06g48980 protein kinase APK1B, chloroplast precursor, putative, expressed gene protein kinase APK1B, chloroplast precursor, putative, expressed chr6 29674092 29677083 - CDS 9 LOC_Os01g15560 hypothetical protein gene hypothetical protein chr1 8747053 8747478 + CDS,promoter 9 LOC_Os08g02710 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr8 1130558 1134715 - CDS,downstream 9 LOC_Os05g02630 lysine-rich arabinogalactan protein 19 precursor, putative, expressed gene lysine-rich arabinogalactan protein 19 precursor, putative, expressed chr5 919575 920482 + CDS,promoter 9 LOC_Os05g13970 phosphorylase domain containing protein, putative, expressed gene phosphorylase domain containing protein, putative, expressed chr5 7774895 7780915 - five_prime_UTR,CDS,downstream 9 LOC_Os03g31880 SHORT-ROOT, putative, expressed gene SHORT-ROOT, putative, expressed chr3 18237038 18239512 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g40710 ZOS3-13 - C2H2 zinc finger protein gene ZOS3-13 - C2H2 zinc finger protein chr3 22633631 22639370 + CDS,downstream 9 LOC_Os01g07190 conserved hypothetical protein gene conserved hypothetical protein chr1 3394762 3395310 + CDS,downstream 9 LOC_Os07g04930 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 2175570 2176641 + five_prime_UTR,promoter,downstream 9 LOC_Os03g48880 receptor protein kinase TMK1 precursor, putative gene receptor protein kinase TMK1 precursor, putative chr3 27831470 27832996 - CDS,promoter 9 LOC_Os12g30570 protein kinase domain containing protein gene protein kinase domain containing protein chr12 18332434 18333588 + CDS,downstream 9 LOC_Os07g42070 DC1 domain-containing protein, putative, expressed gene DC1 domain-containing protein, putative, expressed chr7 25186887 25187787 + five_prime_UTR,promoter,downstream 9 LOC_Os09g20330 annexin, putative gene annexin, putative chr9 12195140 12196682 + CDS,promoter 9 LOC_Os07g05690 expressed protein gene expressed protein chr7 2716202 2718869 + CDS,promoter,downstream 9 LOC_Os06g06570 expressed protein gene expressed protein chr6 3089148 3089826 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g33460 transposon protein, putative, Mutator sub-class, expressed gene transposon protein, putative, Mutator sub-class, expressed chr2 19889442 19893238 + CDS,promoter 9 LOC_Os05g03330 conserved hypothetical protein gene conserved hypothetical protein chr5 1359023 1360997 - CDS,downstream 9 LOC_Os08g29510 conserved hypothetical protein gene conserved hypothetical protein chr8 18090689 18093047 - CDS,downstream 9 LOC_Os03g24480 hypothetical protein gene hypothetical protein chr3 13951940 13953687 + CDS,promoter 9 LOC_Os03g39284 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 21819168 21829965 - CDS,promoter 9 LOC_Os04g04360 expressed protein gene expressed protein chr4 2050231 2050756 + CDS,three_prime_UTR,downstream 9 LOC_Os03g06020 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 3005326 3006327 - CDS,promoter,downstream 9 LOC_Os02g26210 flowering promoting factor-like 1, putative, expressed gene flowering promoting factor-like 1, putative, expressed chr2 15391524 15392735 - three_prime_UTR 9 LOC_Os01g68660 cysteine proteinase inhibitor precursor protein, putative, expressed gene cysteine proteinase inhibitor precursor protein, putative, expressed chr1 39875415 39876200 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g06059 unknown gene unknown chr11 2872261 2872888 - CDS,promoter,downstream 9 LOC_Os03g01870 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr3 523006 524276 + five_prime_UTR,CDS,promoter 9 LOC_Os04g09920 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 5327770 5329920 - five_prime_UTR,CDS,downstream 9 LOC_Os11g12490 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 6975489 6981624 + CDS 9 LOC_Os04g41439 unknown gene unknown chr4 24374595 24374834 - CDS,downstream 9 LOC_Os06g12440 LTPL60 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL60 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr6 6742784 6743850 + CDS 9 LOC_Os07g15809 unknown gene unknown chr7 9181583 9182137 - CDS,promoter,downstream 9 LOC_Os08g31890 conserved hypothetical protein gene conserved hypothetical protein chr8 19763453 19764700 - CDS,promoter,downstream 9 LOC_Os03g20260 aspartic proteinase nepenthesin-1 precursor, putative gene aspartic proteinase nepenthesin-1 precursor, putative chr3 11448148 11449323 + CDS,downstream 9 LOC_Os12g36840 pathogenesis-related Bet v I family protein, putative, expressed gene pathogenesis-related Bet v I family protein, putative, expressed chr12 22551620 22553001 + five_prime_UTR,CDS,promoter 9 LOC_Os04g58540 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr4 34622852 34624001 - CDS,promoter,downstream 9 LOC_Os01g52070 potassium channel AKT1, putative, expressed gene potassium channel AKT1, putative, expressed chr1 29942865 29947609 + CDS,promoter 9 LOC_Os10g32600 MYB family transcription factor, putative gene MYB family transcription factor, putative chr10 17004870 17006751 - CDS,promoter 9 LOC_Os06g50340 receptor protein kinase CLAVATA1 precursor, putative, expressed gene receptor protein kinase CLAVATA1 precursor, putative, expressed chr6 30469047 30473475 - CDS 9 LOC_Os08g13310 hypothetical protein gene hypothetical protein chr8 7907245 7908016 - CDS 9 LOC_Os07g43500 hypothetical protein gene hypothetical protein chr7 26032191 26034247 - CDS,promoter 9 LOC_Os03g25040 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr3 14293196 14296587 + five_prime_UTR,CDS,promoter 9 LOC_Os12g08790 TPR domain protein, putative, expressed gene TPR domain protein, putative, expressed chr12 4521497 4522692 + three_prime_UTR 9 LOC_Os09g18530 nodulation receptor kinase precursor, putative, expressed gene nodulation receptor kinase precursor, putative, expressed chr9 11359267 11362179 - CDS,promoter,downstream 9 LOC_Os06g40960 ZOS6-05 - C2H2 zinc finger protein, expressed gene ZOS6-05 - C2H2 zinc finger protein, expressed chr6 24452134 24455498 + five_prime_UTR,CDS,promoter 9 LOC_Os08g03760 hypothetical protein gene hypothetical protein chr8 1786435 1787719 - CDS,promoter,downstream 9 LOC_Os01g07030 POEI40 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI40 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr1 3311462 3312273 - CDS,promoter,downstream 9 LOC_Os01g39480 anthocyanin regulatory Lc protein, putative gene anthocyanin regulatory Lc protein, putative chr1 22235869 22237022 + CDS,promoter 9 LOC_Os02g01270 START domain containing protein, expressed gene START domain containing protein, expressed chr2 146492 152581 + five_prime_UTR,promoter 9 LOC_Os11g01050 exo70 exocyst complex subunit domain containing protein, expressed gene exo70 exocyst complex subunit domain containing protein, expressed chr11 26028 27636 - five_prime_UTR,CDS,downstream 9 LOC_Os07g45460 conserved hypothetical protein gene conserved hypothetical protein chr7 27116453 27123851 + CDS,promoter 9 LOC_Os02g57720 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr2 35343804 35345585 + CDS,three_prime_UTR 9 LOC_Os07g01520 expressed protein gene expressed protein chr7 325737 328301 + CDS,promoter 9 LOC_Os06g43000 nitrate-induced NOI protein, expressed gene nitrate-induced NOI protein, expressed chr6 25831644 25835857 + five_prime_UTR,CDS,promoter 9 LOC_Os06g13390 SAM dependent carboxyl methyltransferase, putative, expressed gene SAM dependent carboxyl methyltransferase, putative, expressed chr6 7368138 7370783 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g11600 hypothetical protein gene hypothetical protein chr5 6570762 6571046 - CDS,downstream 9 LOC_Os11g09080 hypothetical protein gene hypothetical protein chr11 4817864 4818233 + CDS,downstream 9 LOC_Os07g18874 white-brown complex homolog protein 11, putative, expressed gene white-brown complex homolog protein 11, putative, expressed chr7 11169894 11181980 + CDS 9 LOC_Os11g39060 hypothetical protein gene hypothetical protein chr11 22786735 22787142 - CDS,promoter,downstream 9 LOC_Os10g10630 plant invertase/pectin methylesterase inhibitor domain containing protein gene plant invertase/pectin methylesterase inhibitor domain containing protein chr10 5890778 5891443 - CDS,promoter,downstream 9 LOC_Os06g23060 DEFL11 - Defensin and Defensin-like DEFL family gene DEFL11 - Defensin and Defensin-like DEFL family chr6 13446100 13446756 + CDS,promoter,downstream 9 LOC_Os03g06180 expressed protein gene expressed protein chr3 3096955 3101110 + five_prime_UTR,CDS,promoter 9 LOC_Os03g15090 hypothetical protein gene hypothetical protein chr3 8246552 8247187 + CDS,promoter 9 LOC_Os11g05340 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 2360348 2367995 - CDS 9 LOC_Os07g03600 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1443313 1444070 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g41860 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr2 25156674 25160748 + five_prime_UTR 9 LOC_Os01g67150 hypothetical protein gene hypothetical protein chr1 38976568 38979188 - CDS 9 LOC_Os09g27250 plant viral response family protein, putative, expressed gene plant viral response family protein, putative, expressed chr9 16563526 16565077 - five_prime_UTR,CDS,downstream 9 LOC_Os01g21630 pectinacetylesterase domain containing protein, expressed gene pectinacetylesterase domain containing protein, expressed chr1 12116081 12122169 + five_prime_UTR 9 LOC_Os09g24560 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr9 14616481 14618068 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os05g09240 AGAP006957-PA, putative gene AGAP006957-PA, putative chr5 5161580 5162350 + CDS 9 LOC_Os04g56010 glycine-rich cell wall structural protein 1 precursor, putative gene glycine-rich cell wall structural protein 1 precursor, putative chr4 33175508 33175837 - CDS,promoter 9 LOC_Os03g12990 phytosulfokines precursor, putative, expressed gene phytosulfokines precursor, putative, expressed chr3 7017341 7018301 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g34280 CXE carboxylesterase, putative, expressed gene CXE carboxylesterase, putative, expressed chr7 20522743 20524363 + CDS,three_prime_UTR,promoter 9 LOC_Os11g08460 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr11 4462186 4465255 - CDS,three_prime_UTR,five_prime_UTR,promoter,downstream 9 LOC_Os01g72720 hypothetical protein gene hypothetical protein chr1 42198063 42199288 + CDS,promoter,downstream 9 LOC_Os11g45850 OsWRKY81 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY81 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr11 27268528 27269761 + CDS,three_prime_UTR,downstream 9 LOC_Os12g17940 hypothetical protein gene hypothetical protein chr12 10307836 10308297 - CDS,promoter 9 LOC_Os04g01070 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr4 56419 60825 + CDS,downstream 9 LOC_Os07g47330 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr7 28298599 28300097 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os10g40460 LTPL141 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL141 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21595739 21596417 - CDS,three_prime_UTR,downstream 9 LOC_Os04g39180 nodulation receptor kinase precursor, putative gene nodulation receptor kinase precursor, putative chr4 23108917 23112860 - CDS,downstream 9 LOC_Os12g12810 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr12 7063334 7069399 + CDS,promoter 9 LOC_Os08g41220 BTB/POZ domain containing protein gene BTB/POZ domain containing protein chr8 26025455 26029933 - CDS,downstream 9 LOC_Os02g45780 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr2 27881108 27882381 - three_prime_UTR,promoter 9 LOC_Os03g42780 zinc finger protein-related, putative gene zinc finger protein-related, putative chr3 23825807 23830941 + CDS,promoter 9 LOC_Os02g42870 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 25772210 25774926 + three_prime_UTR,downstream 9 LOC_Os03g09150 pumilio-family RNA binding repeat domain containing protein, expressed gene pumilio-family RNA binding repeat domain containing protein, expressed chr3 4767566 4772076 - five_prime_UTR,downstream 9 LOC_Os04g01080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 62030 63668 + CDS,promoter 9 LOC_Os11g02540 OsWRKY50 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY50 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr11 792117 794609 - five_prime_UTR,CDS,downstream 9 LOC_Os12g42440 chaperone protein dnaJ, putative, expressed gene chaperone protein dnaJ, putative, expressed chr12 26344262 26346243 + CDS,promoter 9 LOC_Os08g01510 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr8 307328 309185 + CDS 9 LOC_Os01g10490 keratin, type I cytoskeletal 9, putative, expressed gene keratin, type I cytoskeletal 9, putative, expressed chr1 5548619 5550003 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g14820 conserved hypothetical protein gene conserved hypothetical protein chr7 8467433 8471099 + CDS,downstream 9 LOC_Os07g15020 conserved hypothetical protein gene conserved hypothetical protein chr7 8608219 8610175 + CDS,promoter 9 LOC_Os11g47620 ZOS11-09 - C2H2 zinc finger protein gene ZOS11-09 - C2H2 zinc finger protein chr11 28239222 28240001 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g03380 expressed protein gene expressed protein chr6 1288048 1290622 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g12350 conserved hypothetical protein gene conserved hypothetical protein chr9 7044390 7053384 + CDS,promoter 9 LOC_Os11g36350 OsFBDUF50 - F-box and DUF domain containing protein gene OsFBDUF50 - F-box and DUF domain containing protein chr11 20952478 20953857 - CDS,promoter,downstream 9 LOC_Os03g01320 LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 218977 220070 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g31040 Citrate transporter protein, putative, expressed gene Citrate transporter protein, putative, expressed chr10 16154183 16167627 + five_prime_UTR 9 LOC_Os09g38150 expressed protein gene expressed protein chr9 21972126 21973764 - CDS,downstream 9 LOC_Os03g20910 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr3 11843778 11847723 - CDS,three_prime_UTR,promoter 9 LOC_Os01g12690 plant-specific domain TIGR01568 family protein, expressed gene plant-specific domain TIGR01568 family protein, expressed chr1 7008033 7009505 + CDS,three_prime_UTR,downstream 9 LOC_Os05g19500 ATCHX, putative, expressed gene ATCHX, putative, expressed chr5 11334982 11337858 + five_prime_UTR,promoter 9 LOC_Os10g31330 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 16357599 16358865 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g18690 BURP domain containing protein, expressed gene BURP domain containing protein, expressed chr2 10897170 10901911 - five_prime_UTR,CDS,downstream 9 LOC_Os04g21790 OsWAK34 - OsWAK receptor-like protein kinase gene OsWAK34 - OsWAK receptor-like protein kinase chr4 12334041 12339359 + CDS 9 LOC_Os11g24340 OsSCP53 - Putative Serine Carboxypeptidase homologue, expressed gene OsSCP53 - Putative Serine Carboxypeptidase homologue, expressed chr11 13400760 13405427 - CDS 9 LOC_Os09g25040 joka8, putative, expressed gene joka8, putative, expressed chr9 14958366 14961768 - CDS,downstream 9 LOC_Os08g11500 conserved hypothetical protein gene conserved hypothetical protein chr8 6744849 6746627 - CDS,promoter,downstream 9 LOC_Os04g28220 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 16505770 16508643 - CDS 9 LOC_Os03g24720 conserved hypothetical protein gene conserved hypothetical protein chr3 14088255 14091194 + CDS,promoter,downstream 9 LOC_Os07g31750 chalcone synthase, putative gene chalcone synthase, putative chr7 18851479 18855439 - CDS 9 LOC_Os07g48010 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 28668506 28670395 + five_prime_UTR,CDS,promoter 9 LOC_Os03g37140 expressed protein gene expressed protein chr3 20582936 20591933 - five_prime_UTR 9 LOC_Os02g56700 dehydrogenase, putative, expressed gene dehydrogenase, putative, expressed chr2 34758300 34760774 + five_prime_UTR 9 LOC_Os06g14810 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr6 8407318 8409309 - three_prime_UTR,promoter,downstream 9 LOC_Os02g44120 ZOS2-13 - C2H2 zinc finger protein, expressed gene ZOS2-13 - C2H2 zinc finger protein, expressed chr2 26662927 26665275 + five_prime_UTR,promoter 9 LOC_Os06g17140 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein chr6 9937312 9938805 - CDS,promoter 9 LOC_Os12g10400 NBS-LRR type resistance protein, putative, expressed gene NBS-LRR type resistance protein, putative, expressed chr12 5500238 5505129 + five_prime_UTR,CDS,promoter 9 LOC_Os08g01150 DTA2, putative, expressed gene DTA2, putative, expressed chr8 101127 106380 + five_prime_UTR,promoter 9 LOC_Os12g23150 4-nitrophenylphosphatase-like, putative, expressed gene 4-nitrophenylphosphatase-like, putative, expressed chr12 13092756 13093942 - CDS,promoter 9 LOC_Os08g23960 OsFBL46 - F-box domain and LRR containing protein, expressed gene OsFBL46 - F-box domain and LRR containing protein, expressed chr8 14489108 14491915 - CDS,three_prime_UTR 9 LOC_Os03g30950 acyl-desaturase, chloroplast precursor, putative, expressed gene acyl-desaturase, chloroplast precursor, putative, expressed chr3 17622207 17623885 - CDS 9 LOC_Os07g37970 cytochrome P450 51, putative gene cytochrome P450 51, putative chr7 22784174 22786372 + CDS,downstream 9 LOC_Os03g63980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 36145782 36146405 + CDS,promoter,downstream 9 LOC_Os07g01260 la domain containing protein, expressed gene la domain containing protein, expressed chr7 153830 157601 - CDS 9 LOC_Os08g11200 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 6576244 6584734 - CDS,downstream 9 LOC_Os07g29990 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 17661767 17666757 + CDS,downstream 9 LOC_Os06g01860 hypothetical protein gene hypothetical protein chr6 483710 484309 - CDS,promoter,downstream 9 LOC_Os02g40400 expressed protein gene expressed protein chr2 24456379 24461846 - CDS,downstream 9 LOC_Os07g13940 cytokinin-N-glucosyltransferase 1, putative, expressed gene cytokinin-N-glucosyltransferase 1, putative, expressed chr7 7967942 7969417 - CDS,promoter,downstream 9 LOC_Os02g36450 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr2 22007420 22011778 + CDS,three_prime_UTR 9 LOC_Os11g31100 gibberellin response modulator protein, putative gene gibberellin response modulator protein, putative chr11 17630689 17636737 - CDS 9 LOC_Os09g17930 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr9 10976574 10980275 - five_prime_UTR,CDS 9 LOC_Os02g12260 hypothetical protein gene hypothetical protein chr2 6385765 6387143 + CDS,downstream 9 LOC_Os11g29920 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr11 16919155 16927553 - CDS 9 LOC_Os04g47059 TRANSPARENT TESTA 8, putative, expressed gene TRANSPARENT TESTA 8, putative, expressed chr4 27730461 27754687 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g53590 3-5 exonuclease domain-containing protein, putative gene 3-5 exonuclease domain-containing protein, putative chr1 30769355 30771959 + CDS,promoter 9 LOC_Os11g13560 serpin domain containing protein, putative gene serpin domain containing protein, putative chr11 7430382 7431181 - CDS,downstream 9 LOC_Os04g44600 CRP1 - Cysteine-rich family protein precursor, expressed gene CRP1 - Cysteine-rich family protein precursor, expressed chr4 26207199 26207960 + three_prime_UTR,downstream 9 LOC_Os01g03370 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr1 1355601 1360257 - CDS,promoter,downstream 9 LOC_Os04g33980 transposon protein, putative, Mutator sub-class, expressed gene transposon protein, putative, Mutator sub-class, expressed chr4 20395894 20399271 + CDS,three_prime_UTR,promoter 9 LOC_Os07g34320 nodulin, putative, expressed gene nodulin, putative, expressed chr7 20561489 20566666 + five_prime_UTR,CDS,promoter 9 LOC_Os01g15709 transferase family protein, putative gene transferase family protein, putative chr1 8834574 8836002 + CDS,promoter,downstream 9 LOC_Os10g40090 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr10 21393486 21395326 + five_prime_UTR,CDS,promoter 9 LOC_Os02g39270 hypothetical protein gene hypothetical protein chr2 23708748 23710071 - CDS,promoter 9 LOC_Os09g17146 expressed protein gene expressed protein chr9 10518938 10520717 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os09g17990 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 11000738 11003821 - CDS 9 LOC_Os09g11020 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr9 6116013 6122691 - CDS 9 LOC_Os03g49880 TCP family transcription factor, putative, expressed gene TCP family transcription factor, putative, expressed chr3 28421557 28423515 + five_prime_UTR,promoter,downstream 9 LOC_Os04g51990 transferase family domain containing protein, expressed gene transferase family domain containing protein, expressed chr4 30684544 30686621 + CDS,promoter,downstream 9 LOC_Os05g16110 hypothetical protein gene hypothetical protein chr5 9107836 9109482 - CDS 9 LOC_Os01g03270 conserved hypothetical protein gene conserved hypothetical protein chr1 1327172 1328169 + CDS,downstream 9 LOC_Os10g34040 nodulin, putative, expressed gene nodulin, putative, expressed chr10 18097662 18100875 + CDS,promoter,downstream 9 LOC_Os06g02830 expressed protein gene expressed protein chr6 1038980 1041720 + CDS,three_prime_UTR,downstream 9 LOC_Os05g34854 gibberellin 20 oxidase 2, putative, expressed gene gibberellin 20 oxidase 2, putative, expressed chr5 20622787 20629715 - CDS,three_prime_UTR 9 LOC_Os01g41180 THION19 - Plant thionin family protein precursor, putative, expressed gene THION19 - Plant thionin family protein precursor, putative, expressed chr1 23312167 23312884 - three_prime_UTR,promoter 9 LOC_Os04g38440 hypothetical protein gene hypothetical protein chr4 22666469 22668985 - CDS,downstream 9 LOC_Os12g15530 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr12 8866838 8872123 + CDS,promoter 9 LOC_Os05g38120 homeodomain protein, putative, expressed gene homeodomain protein, putative, expressed chr5 22291438 22296009 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g16750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 9823541 9828935 - CDS 9 LOC_Os02g48570 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr2 29730294 29735844 - five_prime_UTR,CDS,downstream 9 LOC_Os01g50350 expressed protein gene expressed protein chr1 28909168 28910036 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os07g36750 CSLF3 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed gene CSLF3 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed chr7 22014731 22018191 - CDS,downstream 9 LOC_Os07g31770 chalcone synthase, putative, expressed gene chalcone synthase, putative, expressed chr7 18872797 18874933 - CDS 9 LOC_Os04g24460 phytase, putative gene phytase, putative chr4 14018701 14019902 + CDS,promoter,downstream 9 LOC_Os05g04870 oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed gene oxidoreductase, short chain dehydrogenase/reductase family protein, putative, expressed chr5 2345363 2346818 - three_prime_UTR 9 LOC_Os10g31170 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr10 16252199 16255986 + CDS,promoter,downstream 9 LOC_Os09g38350 AMP-binding domain containing protein, expressed gene AMP-binding domain containing protein, expressed chr9 22082156 22084416 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g44960 AP2 domain containing protein gene AP2 domain containing protein chr8 28221606 28222016 + CDS,promoter,downstream 9 LOC_Os07g46360 glyoxalase family protein, putative, expressed gene glyoxalase family protein, putative, expressed chr7 27651951 27653094 - CDS,three_prime_UTR,promoter 9 LOC_Os05g15880 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr5 8959343 8960506 + five_prime_UTR,CDS,promoter 9 LOC_Os04g02370 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 843723 853773 + CDS 9 LOC_Os06g24740 hypothetical protein gene hypothetical protein chr6 14534000 14534698 + CDS,promoter 9 LOC_Os03g10720 proton-dependent oligopeptide transport, putative gene proton-dependent oligopeptide transport, putative chr3 5476550 5477880 - CDS,downstream 9 LOC_Os07g41920 C1-like domain containing protein gene C1-like domain containing protein chr7 25109725 25111497 + CDS,promoter 9 LOC_Os01g41140 THION18 - Plant thionin family protein precursor, expressed gene THION18 - Plant thionin family protein precursor, expressed chr1 23290615 23291623 - CDS,three_prime_UTR 9 LOC_Os10g21100 glycosyl hydrolase family 10 protein, putative gene glycosyl hydrolase family 10 protein, putative chr10 10640217 10644362 + CDS 9 LOC_Os05g23398 expressed protein gene expressed protein chr5 13314455 13315191 + CDS,three_prime_UTR,downstream 9 LOC_Os01g40550 hsp20/alpha crystallin family protein, putative, expressed gene hsp20/alpha crystallin family protein, putative, expressed chr1 22899923 22901276 - five_prime_UTR,downstream 9 LOC_Os06g45600 hypothetical protein gene hypothetical protein chr6 27607479 27608273 + CDS,promoter,downstream 9 LOC_Os04g29880 OsWAK41 - OsWAK receptor-like protein OsWAK-RLP gene OsWAK41 - OsWAK receptor-like protein OsWAK-RLP chr4 17644044 17646621 - CDS 9 LOC_Os01g08160 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 3952039 3954491 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g32920 dynamin-2B, putative, expressed gene dynamin-2B, putative, expressed chr8 20405506 20416014 + CDS 9 LOC_Os06g22980 CSLD5 - cellulose synthase-like family D, expressed gene CSLD5 - cellulose synthase-like family D, expressed chr6 13413642 13417310 + CDS,three_prime_UTR 9 LOC_Os09g17152 OsFBX319 - F-box domain containing protein, expressed gene OsFBX319 - F-box domain containing protein, expressed chr9 10521921 10523536 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g44500 GEM, putative, expressed gene GEM, putative, expressed chr4 26157316 26158654 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g35810 conserved hypothetical protein gene conserved hypothetical protein chr5 21185105 21186533 + CDS,promoter,downstream 9 LOC_Os02g40710 ammonium transporter protein, putative, expressed gene ammonium transporter protein, putative, expressed chr2 24677764 24679336 + five_prime_UTR,promoter,downstream 9 LOC_Os09g36930 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr9 21309648 21311067 + three_prime_UTR,downstream 9 LOC_Os01g28450 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr1 15933465 15934293 + five_prime_UTR,CDS,promoter 9 LOC_Os11g36280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 20890028 20902396 - CDS,promoter,downstream 9 LOC_Os05g14010 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr5 7802625 7810328 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os08g07650 hypothetical protein gene hypothetical protein chr8 4288248 4288618 + CDS,downstream 9 LOC_Os02g29190 ankyrin, putative, expressed gene ankyrin, putative, expressed chr2 17303250 17310471 - CDS,promoter 9 LOC_Os07g42730 EF hand family protein, expressed gene EF hand family protein, expressed chr7 25584034 25585240 + three_prime_UTR,promoter,downstream 9 LOC_Os12g28050 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr12 16540735 16542080 - CDS,downstream 9 LOC_Os08g09470 conserved hypothetical protein gene conserved hypothetical protein chr8 5484465 5486196 - CDS,promoter,downstream 9 LOC_Os08g33590 basic helix-loop-helix, putative, expressed gene basic helix-loop-helix, putative, expressed chr8 20971546 20974541 - CDS,three_prime_UTR,downstream 9 LOC_Os02g16800 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr2 9574545 9575500 + CDS,promoter 9 LOC_Os08g13000 MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 7717119 7718216 + CDS,promoter 9 LOC_Os02g44310 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr2 26799119 26799956 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g02020 conserved hypothetical protein gene conserved hypothetical protein chr12 598704 601468 + CDS,promoter 9 LOC_Os07g06760 VQ domain containing protein, putative gene VQ domain containing protein, putative chr7 3300503 3301066 + CDS,promoter,downstream 9 LOC_Os12g31340 OsFBD15 - F-box and FBD domain containing protein, expressed gene OsFBD15 - F-box and FBD domain containing protein, expressed chr12 18822500 18824193 - CDS 9 LOC_Os08g43600 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr8 27573423 27574340 + three_prime_UTR 9 LOC_Os03g24690 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr3 14066440 14069801 - CDS 9 LOC_Os01g43260 hypothetical protein gene hypothetical protein chr1 24708671 24709350 + CDS,downstream 9 LOC_Os11g11256 hypothetical protein gene hypothetical protein chr11 6224022 6226725 + CDS,promoter,downstream 9 LOC_Os11g27264 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed gene OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed chr11 15219360 15231186 + five_prime_UTR,CDS 9 LOC_Os02g53820 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr2 32956093 32958651 + CDS,three_prime_UTR 9 LOC_Os02g01310 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr2 168441 169641 - five_prime_UTR,downstream 9 LOC_Os03g24930 tyrosine protein kinase domain containing protein, putative, expressed gene tyrosine protein kinase domain containing protein, putative, expressed chr3 14205670 14207853 + three_prime_UTR 9 LOC_Os05g48570 expressed protein gene expressed protein chr5 27770361 27771877 - CDS,promoter 9 LOC_Os03g08310 ZIM domain containing protein, putative, expressed gene ZIM domain containing protein, putative, expressed chr3 4231003 4232044 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os01g51690 OsWRKY59 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY59 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 29719878 29722020 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g71474 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41396705 41400550 - three_prime_UTR 9 LOC_Os04g04959 unknown gene unknown chr4 2399731 2400191 - CDS,downstream 9 LOC_Os04g45120 serpin domain containing protein, putative gene serpin domain containing protein, putative chr4 26497510 26498834 + CDS,downstream 9 LOC_Os10g24010 OsFBX383 - F-box domain containing protein gene OsFBX383 - F-box domain containing protein chr10 12234230 12236166 + CDS 9 LOC_Os10g14920 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr10 7826241 7832748 - five_prime_UTR,CDS,downstream 9 LOC_Os06g17480 histone-like transcription factor and archaeal histone, putative, expressed gene histone-like transcription factor and archaeal histone, putative, expressed chr6 10136824 10137876 + CDS,three_prime_UTR,downstream 9 LOC_Os05g05110 expressed protein gene expressed protein chr5 2482164 2482613 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g12190 expressed protein gene expressed protein chr1 6648789 6649522 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g08860 expressed protein gene expressed protein chr11 4687371 4690315 - five_prime_UTR,CDS 9 LOC_Os09g16870 A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence gene A3-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with A3 subfamily conserved sequence chr9 10305222 10306406 + CDS 9 LOC_Os02g32770 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 19453201 19457493 - CDS,downstream 9 LOC_Os12g39990 dof zinc finger domain containing protein, putative gene dof zinc finger domain containing protein, putative chr12 24690244 24691041 - CDS,promoter,downstream 9 LOC_Os06g23650 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr6 13803018 13804816 + CDS,promoter,downstream 9 LOC_Os04g44060 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr4 25914148 25916657 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g14814 ATFMN/FHY, putative gene ATFMN/FHY, putative chr10 7776734 7782311 - CDS,promoter 9 LOC_Os06g02750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 997123 1001420 + CDS,promoter,downstream 9 LOC_Os11g10850 dirigent, putative gene dirigent, putative chr11 5974169 5974738 + CDS,promoter 9 LOC_Os04g58400 tRNA synthetase, putative, expressed gene tRNA synthetase, putative, expressed chr4 34558364 34564658 - CDS,downstream 9 LOC_Os02g58530 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr2 35773561 35775519 + CDS,promoter 9 LOC_Os08g03900 hypothetical protein gene hypothetical protein chr8 1857036 1858791 + CDS,downstream 9 LOC_Os10g06140 OsWAK105 - OsWAK receptor-like protein kinase, expressed gene OsWAK105 - OsWAK receptor-like protein kinase, expressed chr10 3120996 3126249 - five_prime_UTR,downstream 9 LOC_Os10g06000 POEI15 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI15 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 3030594 3031697 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g30130 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 15579005 15585194 + CDS,promoter 9 LOC_Os01g38580 beta,beta-carotene 9,10-dioxygenase, putative, expressed gene beta,beta-carotene 9,10-dioxygenase, putative, expressed chr1 21664573 21668264 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g35340 MrBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain, expressed gene MrBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain, expressed chr4 21319520 21322293 - five_prime_UTR,CDS 9 LOC_Os05g15680 hypothetical protein gene hypothetical protein chr5 8869027 8869980 - CDS,downstream 9 LOC_Os07g18162 aldehyde oxidase, putative, expressed gene aldehyde oxidase, putative, expressed chr7 10764854 10766139 + CDS,three_prime_UTR 9 LOC_Os08g09040 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5253289 5254233 + five_prime_UTR,CDS,promoter 9 LOC_Os02g48910 ubiquitin-conjugating enzyme, putative, expressed gene ubiquitin-conjugating enzyme, putative, expressed chr2 29913368 29914469 - three_prime_UTR,promoter 9 LOC_Os02g28220 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr2 16696261 16698079 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g06000 conserved hypothetical protein gene conserved hypothetical protein chr6 2758259 2761128 - CDS,promoter,downstream 9 LOC_Os07g03377 SCP-like extracellular protein gene SCP-like extracellular protein chr7 1354678 1355148 - CDS,promoter,downstream 9 LOC_Os07g39020 OsSub53 - Putative Subtilisin homologue, expressed gene OsSub53 - Putative Subtilisin homologue, expressed chr7 23397216 23399662 + CDS,three_prime_UTR 9 LOC_Os05g02540 F-box protein interaction domain containing protein, expressed gene F-box protein interaction domain containing protein, expressed chr5 883685 884584 + CDS,downstream 9 LOC_Os02g43770 DUF630/DUF632 domains containing protein, putative, expressed gene DUF630/DUF632 domains containing protein, putative, expressed chr2 26403771 26406232 - five_prime_UTR,downstream 9 LOC_Os01g44370 MYB family transcription factor, putative gene MYB family transcription factor, putative chr1 25456537 25456818 + CDS,promoter,downstream 9 LOC_Os11g14870 hypothetical protein gene hypothetical protein chr11 8361471 8362136 - CDS,downstream 9 LOC_Os04g44580 expressed protein gene expressed protein chr4 26196862 26200858 - five_prime_UTR,CDS,downstream 9 LOC_Os11g05820 transposon protein, putative, Mutator sub-class, expressed gene transposon protein, putative, Mutator sub-class, expressed chr11 2692331 2695629 + five_prime_UTR,CDS 9 LOC_Os05g35840 hypothetical protein gene hypothetical protein chr5 21203786 21205066 + CDS,promoter,downstream 9 LOC_Os05g47580 expressed protein gene expressed protein chr5 27198999 27200349 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g05010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 2565658 2567239 - CDS,promoter,downstream 9 LOC_Os12g41890 amino acid permease family protein, putative gene amino acid permease family protein, putative chr12 25927204 25930524 - CDS,downstream 9 LOC_Os05g31910 white-brown complex homolog protein 16, putative, expressed gene white-brown complex homolog protein 16, putative, expressed chr5 18512935 18516134 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g68540 rho GDP-dissociation inhibitor 1, putative, expressed gene rho GDP-dissociation inhibitor 1, putative, expressed chr1 39820990 39822808 - CDS 9 LOC_Os08g31060 phospholipase D alpha 1, putative, expressed gene phospholipase D alpha 1, putative, expressed chr8 19170811 19178150 - CDS,promoter,downstream 9 LOC_Os08g32990 DNA-directed RNA polymerase subunit, putative gene DNA-directed RNA polymerase subunit, putative chr8 20466252 20469277 + CDS 9 LOC_Os05g30770 esterase PIR7, putative gene esterase PIR7, putative chr5 17773836 17776544 - CDS,promoter,downstream 9 LOC_Os03g09120 expressed protein gene expressed protein chr3 4747706 4749255 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os09g15440 OsFBX311 - F-box domain containing protein gene OsFBX311 - F-box domain containing protein chr9 9451832 9453103 - CDS,downstream 9 LOC_Os08g02970 hypothetical protein gene hypothetical protein chr8 1289918 1291988 - CDS,promoter,downstream 9 LOC_Os03g60300 expressed protein gene expressed protein chr3 34282728 34285652 - five_prime_UTR,CDS,downstream 9 LOC_Os11g08029 unknown gene unknown chr11 4174430 4175580 - CDS,promoter,downstream 9 LOC_Os08g08320 hypothetical protein gene hypothetical protein chr8 4778115 4778501 - CDS,promoter,downstream 9 LOC_Os05g50770 C4-dicarboxylate transporter/malic acid transport protein, expressed gene C4-dicarboxylate transporter/malic acid transport protein, expressed chr5 29056999 29059239 + five_prime_UTR,promoter 9 LOC_Os03g59870 EF hand family protein, putative gene EF hand family protein, putative chr3 34074553 34075176 + CDS,promoter 9 LOC_Os11g34070 hypothetical protein gene hypothetical protein chr11 19459144 19460870 + CDS,promoter,downstream 9 LOC_Os03g43340 hypothetical protein gene hypothetical protein chr3 24158731 24160268 + CDS,downstream 9 LOC_Os06g42620 hypothetical protein gene hypothetical protein chr6 25627959 25628810 + CDS,promoter 9 LOC_Os12g04110 pentatricopeptide, putative gene pentatricopeptide, putative chr12 1718705 1725257 - CDS 9 LOC_Os09g39510 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr9 22694639 22695664 - five_prime_UTR,CDS,downstream 9 LOC_Os01g21800 hypothetical protein gene hypothetical protein chr1 12230136 12230530 + CDS,promoter,downstream 9 LOC_Os06g35090 conserved hypothetical protein gene conserved hypothetical protein chr6 20421282 20422668 - CDS,promoter,downstream 9 LOC_Os09g23810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 14187487 14189993 - CDS,promoter,downstream 9 LOC_Os11g12470 expressed protein gene expressed protein chr11 6964380 6966729 - CDS 9 LOC_Os02g03870 periplasmic beta-glucosidase precursor, putative, expressed gene periplasmic beta-glucosidase precursor, putative, expressed chr2 1643966 1648808 - CDS,downstream 9 LOC_Os12g41600 OsSAUR57 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR57 - Auxin-responsive SAUR gene family member, expressed chr12 25710404 25712018 - CDS,three_prime_UTR,five_prime_UTR,promoter 9 LOC_Os01g26240 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 14870547 14877483 - CDS 9 LOC_Os10g08170 hypothetical protein gene hypothetical protein chr10 4421456 4421746 - CDS,downstream 9 LOC_Os09g28210 bHelix-loop-helix transcription factor, putative, expressed gene bHelix-loop-helix transcription factor, putative, expressed chr9 17131210 17132475 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g10980 ZOS9-02 - C2H2 zinc finger protein, expressed gene ZOS9-02 - C2H2 zinc finger protein, expressed chr9 6060400 6065866 - CDS,downstream 9 LOC_Os05g15770 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr5 8902407 8903721 - CDS,three_prime_UTR 9 LOC_Os09g08540 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 4453469 4459072 + CDS 9 LOC_Os04g29030 dehydrogenase, putative, expressed gene dehydrogenase, putative, expressed chr4 17029265 17031527 + five_prime_UTR,CDS,promoter 9 LOC_Os09g29239 purine permease, putative, expressed gene purine permease, putative, expressed chr9 17754642 17770402 - five_prime_UTR,CDS,downstream 9 LOC_Os01g72620 conserved hypothetical protein gene conserved hypothetical protein chr1 42133248 42134894 - CDS 9 LOC_Os12g25660 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 14863347 14865154 - five_prime_UTR,CDS,downstream 9 LOC_Os05g01140 methyltransferase, putative, expressed gene methyltransferase, putative, expressed chr5 116431 118348 - five_prime_UTR,downstream 9 LOC_Os04g13364 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr4 7422045 7434424 + CDS 9 LOC_Os06g37630 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr6 22279908 22285497 - CDS 9 LOC_Os10g25250 ZIM domain containing protein, putative gene ZIM domain containing protein, putative chr10 12971716 12975792 - CDS,promoter,downstream 9 LOC_Os09g17910 expressed protein gene expressed protein chr9 10955082 10964500 + CDS,promoter,downstream 9 LOC_Os09g11200 THION33 - Plant thionin family protein precursor, putative gene THION33 - Plant thionin family protein precursor, putative chr9 6207946 6208227 + CDS,promoter 9 LOC_Os09g25010 hypothetical protein gene hypothetical protein chr9 14944844 14947895 + CDS,downstream 9 LOC_Os12g27950 hypothetical protein gene hypothetical protein chr12 16479724 16480317 + CDS,downstream 9 LOC_Os08g14180 flavonol sulfotransferase, putative gene flavonol sulfotransferase, putative chr8 8463917 8468514 + CDS,downstream 9 LOC_Os01g19950 hypothetical protein gene hypothetical protein chr1 11320817 11321728 - CDS,promoter 9 LOC_Os07g31960 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr7 19006729 19008652 - five_prime_UTR,downstream 9 LOC_Os03g04060 CHIT16 - Chitinase family protein precursor, expressed gene CHIT16 - Chitinase family protein precursor, expressed chr3 1859423 1860782 + CDS,three_prime_UTR,promoter 9 LOC_Os03g43650 uncharacterized protein At4g06744 precursor, putative, expressed gene uncharacterized protein At4g06744 precursor, putative, expressed chr3 24399005 24400974 - three_prime_UTR 9 LOC_Os01g18620 transferase family protein, putative gene transferase family protein, putative chr1 10487924 10489970 - CDS,promoter 9 LOC_Os08g42520 hypothetical protein gene hypothetical protein chr8 26865168 26867339 + CDS,promoter 9 LOC_Os06g03030 expressed protein gene expressed protein chr6 1111540 1112191 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g41290 MrBTB5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain, expressed gene MrBTB5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH-related domain, expressed chr11 24284369 24285472 + three_prime_UTR,promoter,downstream 9 LOC_Os09g30458 subtilisin-like protease, putative, expressed gene subtilisin-like protease, putative, expressed chr9 18557401 18562783 - five_prime_UTR,CDS,downstream 9 LOC_Os01g02000 phosphate transporter 1, putative, expressed gene phosphate transporter 1, putative, expressed chr1 536710 542355 + five_prime_UTR,CDS,promoter 9 LOC_Os05g38390 laccase precursor protein, putative gene laccase precursor protein, putative chr5 22438796 22440602 - CDS,downstream 9 LOC_Os07g25150 myb-related protein 306, putative gene myb-related protein 306, putative chr7 14367181 14369990 - three_prime_UTR 9 LOC_Os03g12830 hypothetical protein gene hypothetical protein chr3 6898839 6899299 + CDS,promoter 9 LOC_Os09g15500 peroxidase precursor, putative gene peroxidase precursor, putative chr9 9485054 9486123 + CDS,promoter,downstream 9 LOC_Os01g39385 expressed protein gene expressed protein chr1 22188590 22194851 - CDS,three_prime_UTR,downstream 9 LOC_Os11g24140 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr11 13259497 13260980 + CDS,three_prime_UTR 9 LOC_Os05g13490 BURP domain containing protein gene BURP domain containing protein chr5 7477964 7479293 - CDS,promoter 9 LOC_Os10g03560 CAF1 family ribonuclease containing protein, putative gene CAF1 family ribonuclease containing protein, putative chr10 1538439 1539326 + CDS,downstream 9 LOC_Os07g12080 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 6744681 6745349 - three_prime_UTR,promoter,downstream 9 LOC_Os01g18375 hydrophobic protein, putative gene hydrophobic protein, putative chr1 10318434 10318862 + CDS,promoter 9 LOC_Os07g37045 conserved hypothetical protein gene conserved hypothetical protein chr7 22196484 22197218 - CDS,promoter 9 LOC_Os12g01490 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr12 295616 298117 - five_prime_UTR,CDS,downstream 9 LOC_Os03g53060 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 30423622 30425569 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g21300 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr2 12645456 12648010 + five_prime_UTR,CDS,promoter 9 LOC_Os05g40810 BRCA1 C Terminus domain containing protein, expressed gene BRCA1 C Terminus domain containing protein, expressed chr5 23868815 23874371 - CDS 9 LOC_Os04g10160 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 5480209 5482214 + five_prime_UTR,CDS,promoter 9 LOC_Os08g09450 OsFBL41 - F-box domain and LRR containing protein, expressed gene OsFBL41 - F-box domain and LRR containing protein, expressed chr8 5473998 5476881 - CDS,three_prime_UTR 9 LOC_Os10g20860 protease inhibitor/seed storage/LTP family, putative gene protease inhibitor/seed storage/LTP family, putative chr10 10499697 10502810 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g18870 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 10663756 10665879 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g58350 OsIAA14 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA14 - Auxin-responsive Aux/IAA gene family member, expressed chr3 33238881 33240188 - three_prime_UTR,downstream 9 LOC_Os09g29284 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr9 17776146 17783626 + five_prime_UTR,CDS,promoter 9 LOC_Os08g38810 BURP domain containing protein, expressed gene BURP domain containing protein, expressed chr8 24530547 24532245 + CDS,three_prime_UTR 9 LOC_Os04g46740 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr4 27521516 27523712 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os07g11380 RAL4 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed gene RAL4 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed chr7 6257914 6258696 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g46860 wall-associated receptor kinase-like 4 precursor, putative, expressed gene wall-associated receptor kinase-like 4 precursor, putative, expressed chr11 27596065 27598952 + CDS,downstream 9 LOC_Os03g25000 GDSL-like lipase/acylhydrolase, putative gene GDSL-like lipase/acylhydrolase, putative chr3 14267414 14270626 + CDS,promoter 9 LOC_Os01g05780 expressed protein gene expressed protein chr1 2758369 2760393 + CDS,promoter 9 LOC_Os02g41460 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr2 24824672 24826239 - five_prime_UTR,downstream 9 LOC_Os10g41320 hypothetical protein gene hypothetical protein chr10 22135120 22136402 - CDS,downstream 9 LOC_Os02g30870 hypothetical protein gene hypothetical protein chr2 18413065 18413929 + CDS,promoter,downstream 9 LOC_Os11g18690 glycosyl hydrolase family 3 protein, putative gene glycosyl hydrolase family 3 protein, putative chr11 10570054 10577531 - CDS,promoter 9 LOC_Os12g38140 expressed protein gene expressed protein chr12 23386502 23387330 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g40100 POEI22 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI22 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr7 24065741 24066649 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os12g41580 hypothetical protein gene hypothetical protein chr12 25702659 25704244 - CDS,promoter 9 LOC_Os08g35200 hypothetical protein gene hypothetical protein chr8 22198940 22199601 + CDS,promoter 9 LOC_Os07g02060 OsWRKY29 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY29 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr7 629562 633316 - five_prime_UTR,CDS,downstream 9 LOC_Os03g46540 hypothetical protein gene hypothetical protein chr3 26322717 26326172 - CDS 9 LOC_Os01g55080 hypothetical protein gene hypothetical protein chr1 31668684 31668971 - CDS,promoter,downstream 9 LOC_Os02g07320 conserved hypothetical protein gene conserved hypothetical protein chr2 3761051 3762806 + CDS 9 LOC_Os05g19570 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr5 11393044 11394830 - five_prime_UTR,CDS,downstream 9 LOC_Os03g41394 unknown gene unknown chr3 23038994 23039771 - CDS,promoter 9 LOC_Os06g36240 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr6 21221686 21222747 + three_prime_UTR,downstream 9 LOC_Os01g39560 anthocyanin regulatory protein, putative gene anthocyanin regulatory protein, putative chr1 22300191 22306812 + CDS 9 LOC_Os04g31430 RALFL30 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed gene RALFL30 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed chr4 18629068 18629573 + CDS,three_prime_UTR,downstream 9 LOC_Os01g74570 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr1 43184576 43185466 + CDS,three_prime_UTR,promoter 9 LOC_Os08g16660 aspartic proteinase nepenthesin precursor, putative, expressed gene aspartic proteinase nepenthesin precursor, putative, expressed chr8 10188849 10192414 - five_prime_UTR,downstream 9 LOC_Os01g43950 expressed protein gene expressed protein chr1 25189690 25190800 - three_prime_UTR,promoter,downstream 9 LOC_Os08g30670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 18899245 18908883 + CDS,promoter 9 LOC_Os09g21120 armadillo/beta-catenin repeat family protein, putative, expressed gene armadillo/beta-catenin repeat family protein, putative, expressed chr9 12745533 12748124 + three_prime_UTR,promoter,downstream 9 LOC_Os08g18060 expressed protein gene expressed protein chr8 11063466 11065355 + CDS,promoter 9 LOC_Os07g09850 hypothetical protein gene hypothetical protein chr7 5236178 5239612 - CDS 9 LOC_Os12g36350 conserved hypothetical protein gene conserved hypothetical protein chr12 22218928 22221282 + CDS,promoter 9 LOC_Os11g04270 hypothetical protein gene hypothetical protein chr11 1752627 1754453 + CDS,promoter 9 LOC_Os07g03288 SCP-like extracellular protein gene SCP-like extracellular protein chr7 1321525 1321995 - CDS,promoter,downstream 9 LOC_Os03g24440 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr3 13921499 13922485 - CDS,downstream 9 LOC_Os08g05580 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr8 2982744 2985765 + CDS,downstream 9 LOC_Os03g37830 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr3 20977128 20984269 - five_prime_UTR,CDS,downstream 9 LOC_Os12g11660 RALFL45 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL45 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr12 6323884 6324608 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g43620 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr12 27055096 27056542 + CDS,promoter,downstream 9 LOC_Os11g02400 LTPL8 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL8 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 714403 715545 + three_prime_UTR,promoter,downstream 9 LOC_Os06g44920 OsFBDUF34 - F-box and DUF domain containing protein gene OsFBDUF34 - F-box and DUF domain containing protein chr6 27153896 27155263 + CDS,promoter 9 LOC_Os11g24750 conserved hypothetical protein gene conserved hypothetical protein chr11 13633787 13635100 - CDS 9 LOC_Os02g01840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 460866 464983 + CDS,downstream 9 LOC_Os03g27740 expressed protein gene expressed protein chr3 15900327 15900740 + CDS,promoter,downstream 9 LOC_Os08g12410 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr8 7324126 7326759 - CDS,three_prime_UTR,downstream 9 LOC_Os09g26610 OsSAUR38 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR38 - Auxin-responsive SAUR gene family member, expressed chr9 16142734 16143534 - CDS,three_prime_UTR,downstream 9 LOC_Os07g13040 hypothetical protein gene hypothetical protein chr7 7475190 7478735 - CDS 9 LOC_Os05g38420 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr5 22470978 22473543 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g19229 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr9 11482603 11505481 - CDS 9 LOC_Os02g17680 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr2 10181424 10189199 - CDS,three_prime_UTR,downstream 9 LOC_Os12g26129 unknown gene unknown chr12 15212537 15213233 + CDS,promoter 9 LOC_Os01g11860 DJ-1 family protein, putative, expressed gene DJ-1 family protein, putative, expressed chr1 6411786 6418895 + CDS,promoter 9 LOC_Os10g29810 MBTB58 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB58 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr10 15426890 15428083 - CDS,downstream 9 LOC_Os01g27170 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr1 15150934 15156219 - CDS 9 LOC_Os02g03120 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr2 1237099 1240203 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os05g44170 cyclic phosphodiesterase, putative, expressed gene cyclic phosphodiesterase, putative, expressed chr5 25603565 25604812 + CDS,three_prime_UTR,downstream 9 LOC_Os06g37700 hypothetical protein gene hypothetical protein chr6 22335719 22336522 + CDS,downstream 9 LOC_Os02g34360 conserved hypothetical protein gene conserved hypothetical protein chr2 20550887 20551627 + CDS,promoter 9 LOC_Os12g22920 expressed protein gene expressed protein chr12 12938103 12939597 + five_prime_UTR,CDS,promoter 9 LOC_Os07g14340 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 8190040 8191589 + CDS 9 LOC_Os07g04110 legume lectins beta domain containing protein, expressed gene legume lectins beta domain containing protein, expressed chr7 1742476 1744750 + three_prime_UTR 9 LOC_Os05g44030 protein kinase, putative, expressed gene protein kinase, putative, expressed chr5 25553267 25555722 + CDS,promoter 9 LOC_Os03g39650 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 22046977 22051049 + CDS,downstream 9 LOC_Os12g35690 RALFL5 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL5 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr12 21666405 21667544 + CDS,three_prime_UTR 9 LOC_Os02g17730 BAM2, putative gene BAM2, putative chr2 10239686 10240108 - CDS,promoter 9 LOC_Os01g09930 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 5162291 5167424 + CDS,promoter,downstream 9 LOC_Os07g08350 C4-dicarboxylate transporter/malic acid transport protein, expressed gene C4-dicarboxylate transporter/malic acid transport protein, expressed chr7 4282647 4286283 + CDS,three_prime_UTR 9 LOC_Os05g25040 expressed protein gene expressed protein chr5 14431929 14436965 - CDS,three_prime_UTR 9 LOC_Os11g17049 unknown gene unknown chr11 9439803 9440563 + CDS,promoter 9 LOC_Os06g40160 expressed protein gene expressed protein chr6 23899372 23903505 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g13780 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 8069498 8073806 + CDS 9 LOC_Os05g12808 DUF623 domain containing protein gene DUF623 domain containing protein chr5 7356724 7357611 - CDS,downstream 9 LOC_Os12g41040 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 25358610 25369895 - CDS,downstream 9 LOC_Os10g40530 LTPL146 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL146 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21625497 21626256 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g56580 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr3 32227186 32229477 + five_prime_UTR,promoter 9 LOC_Os05g03410 hypothetical protein gene hypothetical protein chr5 1417457 1421398 - CDS,promoter 9 LOC_Os01g46440 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr1 26422466 26422696 - CDS,promoter,downstream 9 LOC_Os10g37710 hydrolase, alpha/beta fold family protein, putative, expressed gene hydrolase, alpha/beta fold family protein, putative, expressed chr10 20104129 20107662 + five_prime_UTR,CDS,promoter 9 LOC_Os01g38850 receptor-like serine-threonine protein kinase, putative gene receptor-like serine-threonine protein kinase, putative chr1 21793247 21796089 - CDS,downstream 9 LOC_Os05g23194 expressed protein gene expressed protein chr5 13172885 13173637 - CDS,three_prime_UTR 9 LOC_Os11g10840 conserved hypothetical protein gene conserved hypothetical protein chr11 5970072 5970275 + CDS,promoter,downstream 9 LOC_Os06g06320 osFTL2 FT-Like2 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL2 FT-Like2 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr6 2939005 2941453 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g50404 hypothetical protein gene hypothetical protein chr2 30778782 30779481 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g24010 pleiotropic drug resistance protein, putative, expressed gene pleiotropic drug resistance protein, putative, expressed chr1 13516492 13527454 + CDS,promoter 9 LOC_Os05g34010 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr5 20024154 20029009 - CDS,three_prime_UTR 9 LOC_Os02g27370 hypothetical protein gene hypothetical protein chr2 16129148 16129498 + CDS,downstream 9 LOC_Os11g31715 expressed protein gene expressed protein chr11 18115656 18119767 - five_prime_UTR,downstream 9 LOC_Os04g01874 protein kinase, putative, expressed gene protein kinase, putative, expressed chr4 544742 552539 - CDS,three_prime_UTR 9 LOC_Os11g31190 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr11 17705536 17708336 - CDS,three_prime_UTR,downstream 9 LOC_Os03g06010 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 3002409 3003571 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g43640 ribonuclease T2 family domain containing protein gene ribonuclease T2 family domain containing protein chr7 26124856 26127310 + CDS,promoter,downstream 9 LOC_Os10g18099 OsWRKY18 - Superfamily of TFs having WRKY and zinc finger domains gene OsWRKY18 - Superfamily of TFs having WRKY and zinc finger domains chr10 9113446 9120839 + CDS,downstream 9 LOC_Os01g38110 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 21341084 21343021 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g33270 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr11 19208699 19211784 + CDS,three_prime_UTR,promoter 9 LOC_Os08g45170 carboxyl-terminal peptidase, putative, expressed gene carboxyl-terminal peptidase, putative, expressed chr8 28352644 28358084 - CDS,three_prime_UTR 9 LOC_Os07g47210 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr7 28221562 28223905 - five_prime_UTR,downstream 9 LOC_Os01g13000 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr1 7215513 7224223 - five_prime_UTR,CDS,downstream 9 LOC_Os01g12570 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed gene 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed chr1 6911704 6914127 - CDS,three_prime_UTR 9 LOC_Os04g55100 expressed protein gene expressed protein chr4 32579705 32581252 + CDS,downstream 9 LOC_Os01g46720 expressed protein gene expressed protein chr1 26610755 26617660 + three_prime_UTR,downstream 9 LOC_Os03g22080 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr3 12651502 12652300 + three_prime_UTR,downstream 9 LOC_Os08g39174 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 24739090 24755775 - CDS 9 LOC_Os01g03320 BBTI2 - Bowman-Birk type bran trypsin inhibitor precursor, expressed gene BBTI2 - Bowman-Birk type bran trypsin inhibitor precursor, expressed chr1 1340319 1341277 - three_prime_UTR 9 LOC_Os06g43360 hypothetical protein gene hypothetical protein chr6 26067995 26068468 + CDS,downstream 9 LOC_Os10g10480 expressed protein gene expressed protein chr10 5776256 5783890 + CDS 9 LOC_Os11g18110 POT family protein gene POT family protein chr11 10179819 10186387 + CDS,downstream 9 LOC_Os04g46650 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr4 27470529 27471942 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g05480 transcription factor, putative, expressed gene transcription factor, putative, expressed chr11 2458158 2464637 - five_prime_UTR,CDS,downstream 9 LOC_Os10g29450 conserved hypothetical protein gene conserved hypothetical protein chr10 15229432 15229983 + CDS,promoter,downstream 9 LOC_Os01g66570 ZOS1-19 - C2H2 zinc finger protein gene ZOS1-19 - C2H2 zinc finger protein chr1 38654193 38655404 - CDS,promoter,downstream 9 LOC_Os08g15710 DC1 domain, putative, expressed gene DC1 domain, putative, expressed chr8 9537129 9538760 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g44950 LTPL91 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL91 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 25375182 25376866 - CDS,downstream 9 LOC_Os12g26590 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 15570929 15571612 - CDS,promoter 9 LOC_Os08g44830 ZOS8-14 - C2H2 zinc finger protein, expressed gene ZOS8-14 - C2H2 zinc finger protein, expressed chr8 28152463 28156615 - CDS,three_prime_UTR 9 LOC_Os09g27599 unknown gene unknown chr9 16770555 16771000 + CDS 9 LOC_Os11g34720 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr11 19877225 19883114 - CDS,three_prime_UTR 9 LOC_Os01g59230 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 34230983 34242050 - CDS 9 LOC_Os11g10250 expressed protein gene expressed protein chr11 5558588 5564059 - CDS 9 LOC_Os01g03380 BBTI6 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed gene BBTI6 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed chr1 1362516 1363303 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os05g51740 receptor protein kinase CLAVATA1 precursor, putative, expressed gene receptor protein kinase CLAVATA1 precursor, putative, expressed chr5 29614870 29619627 - CDS,three_prime_UTR 9 LOC_Os07g11320 RAL1 - Seed allergenic protein RA5/RA14/RA17 precursor gene RAL1 - Seed allergenic protein RA5/RA14/RA17 precursor chr7 6240369 6241000 - CDS,promoter 9 LOC_Os01g45720 expressed protein gene expressed protein chr1 25956663 25957654 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g42520 expressed protein gene expressed protein chr3 23654109 23656475 + five_prime_UTR,promoter 9 LOC_Os03g25190 OsFBX87 - F-box domain containing protein gene OsFBX87 - F-box domain containing protein chr3 14395739 14397034 + CDS,downstream 9 LOC_Os03g37120 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr3 20567824 20571137 + CDS 9 LOC_Os10g06630 peptidyl-prolyl cis-trans isomerase, putative, expressed gene peptidyl-prolyl cis-trans isomerase, putative, expressed chr10 3437449 3438463 + three_prime_UTR 9 LOC_Os03g33650 AGO7, putative, expressed gene AGO7, putative, expressed chr3 19242680 19247284 + CDS,three_prime_UTR 9 LOC_Os12g18960 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr12 10996015 11001677 - CDS 9 LOC_Os09g19360 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed chr9 11586115 11587928 - five_prime_UTR,CDS,downstream 9 LOC_Os07g22510 expressed protein gene expressed protein chr7 12664281 12665375 + CDS,three_prime_UTR,downstream 9 LOC_Os11g33450 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr11 19325708 19329479 + CDS,downstream 9 LOC_Os03g14810 MYB-like transcription factor DIVARICATA, putative gene MYB-like transcription factor DIVARICATA, putative chr3 8060233 8060826 - CDS,downstream 9 LOC_Os10g18480 glucosyltransferase, putative gene glucosyltransferase, putative chr10 9314508 9315374 - CDS,promoter 9 LOC_Os09g26160 glutamate receptor, putative, expressed gene glutamate receptor, putative, expressed chr9 15764944 15769860 + five_prime_UTR,promoter 9 LOC_Os11g41120 proline-rich protein, putative, expressed gene proline-rich protein, putative, expressed chr11 24171355 24173945 + CDS,three_prime_UTR,promoter 9 LOC_Os04g54980 hypothetical protein gene hypothetical protein chr4 32513598 32515735 - CDS,downstream 9 LOC_Os03g24620 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 14018217 14023018 + CDS,promoter,downstream 9 LOC_Os11g31260 conserved hypothetical protein gene conserved hypothetical protein chr11 17770721 17771080 + CDS,promoter 9 LOC_Os03g57620 hypothetical protein gene hypothetical protein chr3 32838779 32840850 + CDS 9 LOC_Os06g35660 reticuline oxidase-like protein precursor, putative gene reticuline oxidase-like protein precursor, putative chr6 20811524 20813110 - CDS,downstream 9 LOC_Os11g47500 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28199892 28200806 - CDS,promoter,downstream 9 LOC_Os02g10140 bZIP transcription factor domain containing protein gene bZIP transcription factor domain containing protein chr2 5315119 5318064 + CDS,promoter 9 LOC_Os12g29650 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr12 17674737 17676629 - CDS 9 LOC_Os09g16590 cysteine-rich receptor-like protein kinase 21 precursor, putative gene cysteine-rich receptor-like protein kinase 21 precursor, putative chr9 10184189 10185583 + CDS,promoter,downstream 9 LOC_Os03g61470 uncharacterized Cys-rich domain containing protein, putative, expressed gene uncharacterized Cys-rich domain containing protein, putative, expressed chr3 34863546 34864224 - CDS,promoter,downstream 9 LOC_Os10g05910 POEI9 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI9 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2980597 2981605 - five_prime_UTR,promoter,downstream 9 LOC_Os12g15550 S-locus-specific glycoprotein S13 precursor, putative, expressed gene S-locus-specific glycoprotein S13 precursor, putative, expressed chr12 8880529 8881980 + CDS,three_prime_UTR,downstream 9 LOC_Os01g53650 zinc finger CCCH type family protein, putative, expressed gene zinc finger CCCH type family protein, putative, expressed chr1 30823645 30824626 + CDS,three_prime_UTR 9 LOC_Os11g12480 OsFBL54 - F-box domain and LRR containing protein, expressed gene OsFBL54 - F-box domain and LRR containing protein, expressed chr11 6970884 6973117 + CDS 9 LOC_Os01g59680 NHL25, putative, expressed gene NHL25, putative, expressed chr1 34523455 34525573 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g45640 hypothetical protein gene hypothetical protein chr2 27754280 27756131 - CDS 9 LOC_Os09g12380 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr9 7076212 7077851 - five_prime_UTR,CDS,downstream 9 LOC_Os12g38330 RALFL44 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL44 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr12 23490665 23491339 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g06260 harpin-induced protein 1 domain containing protein, expressed gene harpin-induced protein 1 domain containing protein, expressed chr12 2978479 2979875 - five_prime_UTR,downstream 9 LOC_Os12g29489 unknown gene unknown chr12 17524063 17524485 + CDS,promoter,downstream 9 LOC_Os09g13260 hypothetical protein gene hypothetical protein chr9 7650310 7651897 - CDS,promoter 9 LOC_Os12g06920 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr12 3374472 3380285 + CDS 9 LOC_Os01g65690 4,5-DOPA dioxygenase extradiol, putative, expressed gene 4,5-DOPA dioxygenase extradiol, putative, expressed chr1 38143740 38145102 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g31470 expressed protein gene expressed protein chr11 17915879 17924311 + five_prime_UTR,promoter 9 LOC_Os11g35390 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr11 20268994 20271581 - CDS,three_prime_UTR,downstream 9 LOC_Os12g11620 hypothetical protein gene hypothetical protein chr12 6300742 6300951 - CDS,promoter,downstream 9 LOC_Os07g31070 expressed protein gene expressed protein chr7 18392752 18398066 + CDS 9 LOC_Os02g37370 hypothetical protein gene hypothetical protein chr2 22570046 22570696 - CDS,downstream 9 LOC_Os02g34710 expressed protein gene expressed protein chr2 20817610 20819032 - five_prime_UTR,downstream 9 LOC_Os11g04380 domain of unknown function, DUF250 domain containing protein, expressed gene domain of unknown function, DUF250 domain containing protein, expressed chr11 1817917 1819505 + five_prime_UTR,CDS,promoter 9 LOC_Os09g03280 expressed protein gene expressed protein chr9 1576121 1576927 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g62060 plant-specific domain TIGR01589 family protein, expressed gene plant-specific domain TIGR01589 family protein, expressed chr1 35911033 35912345 + CDS,three_prime_UTR,downstream 9 LOC_Os10g28050 chitinase 2, putative, expressed gene chitinase 2, putative, expressed chr10 14487725 14489102 + three_prime_UTR,downstream 9 LOC_Os08g02230 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr8 766548 769919 - five_prime_UTR,downstream 9 LOC_Os02g09850 expressed protein gene expressed protein chr2 5078940 5079709 - five_prime_UTR,CDS,downstream 9 LOC_Os12g29820 hypothetical protein gene hypothetical protein chr12 17793129 17795379 - CDS 9 LOC_Os06g16790 go35 NBS-LRR, putative, expressed gene go35 NBS-LRR, putative, expressed chr6 9714209 9723860 - CDS 9 LOC_Os01g03360 BBTI5 - Bowman-Birk type bran trypsin inhibitor precursor, expressed gene BBTI5 - Bowman-Birk type bran trypsin inhibitor precursor, expressed chr1 1352629 1353802 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os10g31780 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed gene oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed chr10 16592705 16593490 + CDS,downstream 9 LOC_Os08g18974 expressed protein gene expressed protein chr8 11320678 11322568 + five_prime_UTR,promoter,downstream 9 LOC_Os01g09940 hypothetical protein gene hypothetical protein chr1 5170227 5170814 + CDS,promoter,downstream 9 LOC_Os07g34920 aspartic proteinase nepenthesin precursor, putative, expressed gene aspartic proteinase nepenthesin precursor, putative, expressed chr7 20925859 20927390 - three_prime_UTR,promoter 9 LOC_Os02g48770 SAM dependent carboxyl methyltransferase, putative, expressed gene SAM dependent carboxyl methyltransferase, putative, expressed chr2 29844503 29846682 + five_prime_UTR,CDS,promoter 9 LOC_Os11g33170 hypothetical protein gene hypothetical protein chr11 19162476 19163153 - CDS,promoter 9 LOC_Os03g37411 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 20723898 20745828 - CDS 9 LOC_Os01g71070 xylanase inhibitor, putative, expressed gene xylanase inhibitor, putative, expressed chr1 41132457 41133940 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g23350 glycosyl hydrolase family 10 protein, putative, expressed gene glycosyl hydrolase family 10 protein, putative, expressed chr5 13270920 13273190 - CDS,downstream 9 LOC_Os05g37190 ZOS5-08 - C2H2 zinc finger protein, expressed gene ZOS5-08 - C2H2 zinc finger protein, expressed chr5 21674717 21677188 + three_prime_UTR,downstream 9 LOC_Os05g33420 xyloglucanase inhibitor, putative gene xyloglucanase inhibitor, putative chr5 19576358 19577678 + CDS,downstream 9 LOC_Os07g24000 AWPM-19-like membrane family protein, putative, expressed gene AWPM-19-like membrane family protein, putative, expressed chr7 13606710 13608052 + three_prime_UTR,promoter 9 LOC_Os06g08960 conserved hypothetical protein gene conserved hypothetical protein chr6 4515894 4523961 - CDS,promoter 9 LOC_Os06g09340 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr6 4699490 4702228 + CDS,promoter 9 LOC_Os06g03040 hypothetical protein gene hypothetical protein chr6 1115676 1116332 - CDS,promoter 9 LOC_Os06g10320 hypothetical protein gene hypothetical protein chr6 5304529 5305732 + CDS,promoter,downstream 9 LOC_Os11g34470 hypothetical protein gene hypothetical protein chr11 19725755 19728719 - CDS 9 LOC_Os04g45450 hypothetical protein gene hypothetical protein chr4 26711858 26712396 - CDS,promoter,downstream 9 LOC_Os01g43590 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr1 24966354 24968003 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g44480 peroxidase, putative, expressed gene peroxidase, putative, expressed chr7 26560538 26562366 - CDS,three_prime_UTR,promoter 9 LOC_Os07g14750 60S acidic ribosomal protein, putative, expressed gene 60S acidic ribosomal protein, putative, expressed chr7 8427316 8427768 - CDS,promoter 9 LOC_Os08g37290 basic helix-loop-helix, putative, expressed gene basic helix-loop-helix, putative, expressed chr8 23569849 23570674 + CDS,downstream 9 LOC_Os06g35490 peroxidase precursor, putative gene peroxidase precursor, putative chr6 20687531 20690748 - CDS,downstream 9 LOC_Os01g64390 hypothetical protein gene hypothetical protein chr1 37375306 37376039 + CDS,promoter 9 LOC_Os10g23160 ent-kaurenoic acid oxidase 1, putative gene ent-kaurenoic acid oxidase 1, putative chr10 12015054 12016310 - CDS,downstream 9 LOC_Os02g06160 cysteine-rich receptor-like protein kinase 16 precursor, putative gene cysteine-rich receptor-like protein kinase 16 precursor, putative chr2 3076493 3078824 + CDS,promoter 9 LOC_Os08g43020 transferase family protein, putative gene transferase family protein, putative chr8 27193768 27194726 + CDS,promoter,downstream 9 LOC_Os11g09620 OsFBX406 - F-box domain containing protein gene OsFBX406 - F-box domain containing protein chr11 5137193 5141094 - CDS 9 LOC_Os01g45914 expressed protein gene expressed protein chr1 26086528 26087291 - three_prime_UTR,promoter 9 LOC_Os03g46470 metal cation transporter, putative, expressed gene metal cation transporter, putative, expressed chr3 26279204 26285071 - CDS 9 LOC_Os07g29960 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr7 17639730 17642259 - CDS,downstream 9 LOC_Os06g12455 expressed protein gene expressed protein chr6 6753295 6754542 - five_prime_UTR,promoter,downstream 9 LOC_Os03g09190 OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed gene OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed chr3 4788627 4792148 + CDS,three_prime_UTR 9 LOC_Os03g47360 hypothetical protein gene hypothetical protein chr3 26777955 26781732 - CDS,promoter,downstream 9 LOC_Os08g20420 MGD2, putative, expressed gene MGD2, putative, expressed chr8 12265096 12268676 + CDS,three_prime_UTR,downstream 9 LOC_Os07g13260 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr7 7603092 7604703 - five_prime_UTR,downstream 9 LOC_Os04g46384 MYB family transcription factor, putative gene MYB family transcription factor, putative chr4 27317902 27319645 + CDS,downstream 9 LOC_Os04g52810 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr4 31254493 31258295 - five_prime_UTR,CDS,downstream 9 LOC_Os02g26720 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed gene Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed chr2 15691972 15693521 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g42000 hypothetical protein gene hypothetical protein chr12 26010614 26011272 + CDS,promoter,downstream 9 LOC_Os11g31430 expressed protein gene expressed protein chr11 17884332 17898358 + CDS 9 LOC_Os10g39610 expressed protein gene expressed protein chr10 21096966 21097711 + five_prime_UTR,promoter 9 LOC_Os08g15720 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr8 9542910 9544724 - CDS,promoter 9 LOC_Os06g01920 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr6 510856 511805 - CDS,downstream 9 LOC_Os09g20310 hypothetical protein gene hypothetical protein chr9 12188700 12189562 + CDS,downstream 9 LOC_Os01g14850 MFS18 protein precursor, putative, expressed gene MFS18 protein precursor, putative, expressed chr1 8304547 8305555 - three_prime_UTR,promoter,downstream 9 LOC_Os04g39520 ZOS4-08 - C2H2 zinc finger protein gene ZOS4-08 - C2H2 zinc finger protein chr4 23342182 23347218 + CDS,downstream 9 LOC_Os11g05760 OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed gene OsProCP5 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed chr11 2636531 2642206 - five_prime_UTR,CDS,downstream 9 LOC_Os12g14126 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr12 8013185 8017350 + three_prime_UTR 9 LOC_Os03g24650 terpene synthase family, metal binding domain containing protein gene terpene synthase family, metal binding domain containing protein chr3 14041926 14043535 - CDS,promoter,downstream 9 LOC_Os01g47560 OsWRKY16 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY16 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 27195373 27199946 - three_prime_UTR,promoter,downstream 9 LOC_Os12g28750 TPD1, putative, expressed gene TPD1, putative, expressed chr12 16982369 16984821 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g28770 MBTB34 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB34 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr10 14934928 14936046 - CDS,downstream 9 LOC_Os07g29840 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 17538969 17551783 - CDS,promoter 9 LOC_Os09g21160 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr9 12771485 12773180 - five_prime_UTR,CDS,downstream 9 LOC_Os07g18158 aldehyde oxidase, putative, expressed gene aldehyde oxidase, putative, expressed chr7 10761649 10762608 + CDS,promoter 9 LOC_Os09g13410 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr9 7752372 7754498 + CDS,three_prime_UTR 9 LOC_Os08g13010 hypothetical protein gene hypothetical protein chr8 7723315 7725385 - CDS,promoter 9 LOC_Os03g27190 ICE-like protease p20 domain containing protein, putative, expressed gene ICE-like protease p20 domain containing protein, putative, expressed chr3 15566546 15570782 - CDS,downstream 9 LOC_Os12g32750 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr12 19750975 19758057 + CDS 9 LOC_Os06g11900 conserved hypothetical protein gene conserved hypothetical protein chr6 6332935 6333979 - CDS 9 LOC_Os12g43320 hypothetical protein gene hypothetical protein chr12 26848776 26849141 + CDS,promoter,downstream 9 LOC_Os01g56430 ctr copper transporter family protein, putative, expressed gene ctr copper transporter family protein, putative, expressed chr1 32525246 32525898 + three_prime_UTR,downstream 9 LOC_Os12g26690 expressed protein gene expressed protein chr12 15636766 15637741 + five_prime_UTR,promoter 9 LOC_Os06g07700 conserved hypothetical protein gene conserved hypothetical protein chr6 3722343 3724139 - CDS,promoter,downstream 9 LOC_Os05g01570 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr5 338846 340879 + five_prime_UTR,CDS,promoter 9 LOC_Os11g45980 NBS-LRR type disease resistance protein, putative, expressed gene NBS-LRR type disease resistance protein, putative, expressed chr11 27348695 27353306 + CDS,promoter 9 LOC_Os07g11659 unknown gene unknown chr7 6438047 6438995 + CDS,promoter 9 LOC_Os11g46810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 27566939 27569020 + CDS,downstream 9 LOC_Os07g30950 hydroxylase, putative, expressed gene hydroxylase, putative, expressed chr7 18327963 18329808 + five_prime_UTR,CDS,promoter 9 LOC_Os01g29870 multidrug resistance protein 9, putative, expressed gene multidrug resistance protein 9, putative, expressed chr1 16730618 16732693 + CDS,promoter 9 LOC_Os02g22010 hypothetical protein gene hypothetical protein chr2 13093976 13094245 + CDS,promoter 9 LOC_Os02g15760 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr2 8879440 8882658 - CDS,promoter,downstream 9 LOC_Os11g09580 OsFBL53 - F-box domain and LRR containing protein gene OsFBL53 - F-box domain and LRR containing protein chr11 5121322 5123217 - CDS,downstream 9 LOC_Os09g26940 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 16360322 16362288 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g20690 hypothetical protein gene hypothetical protein chr4 11581974 11582563 - CDS,downstream 9 LOC_Os11g31380 no apical meristem protein, putative gene no apical meristem protein, putative chr11 17845662 17847561 + CDS 9 LOC_Os07g32710 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 19532183 19533584 + CDS,three_prime_UTR,promoter 9 LOC_Os09g37200 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr9 21463138 21464995 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g50600 hypothetical protein gene hypothetical protein chr3 28889105 28889485 + CDS,promoter 9 LOC_Os07g40900 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 24482489 24483929 - five_prime_UTR,CDS,downstream 9 LOC_Os11g40870 hypothetical protein gene hypothetical protein chr11 23983060 23985775 + CDS,promoter 9 LOC_Os02g12150 expressed protein gene expressed protein chr2 6321145 6322091 - CDS 9 LOC_Os12g09500 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 4983211 4987311 - CDS,promoter 9 LOC_Os05g09704 HAD superfamily phosphatase, putative, expressed gene HAD superfamily phosphatase, putative, expressed chr5 5472667 5474656 - CDS,three_prime_UTR,downstream 9 LOC_Os04g52720 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr4 31207774 31210083 - five_prime_UTR,CDS 9 LOC_Os11g47980 expressed protein gene expressed protein chr11 28414807 28416686 - CDS,promoter,downstream 9 LOC_Os05g10780 aminotransferase, classes I and II, domain containing protein, expressed gene aminotransferase, classes I and II, domain containing protein, expressed chr5 5954490 5956185 - CDS,downstream 9 LOC_Os06g09740 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 4961934 4965474 - CDS 9 LOC_Os02g29110 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr2 17229669 17230425 - CDS,promoter,downstream 9 LOC_Os06g33080 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 19257149 19258379 - CDS,three_prime_UTR,downstream 9 LOC_Os08g18870 hypothetical protein gene hypothetical protein chr8 11257615 11259114 - CDS,promoter,downstream 9 LOC_Os01g71400 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41369672 41370906 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g41930 DC1 domain-containing protein, putative gene DC1 domain-containing protein, putative chr7 25116773 25117486 + CDS,promoter,downstream 9 LOC_Os04g44610 white-brown complex homolog protein 11, putative, expressed gene white-brown complex homolog protein 11, putative, expressed chr4 26210785 26216535 + five_prime_UTR,CDS,promoter 9 LOC_Os12g08850 expressed protein gene expressed protein chr12 4567432 4571317 - five_prime_UTR,promoter,downstream 9 LOC_Os11g48110 phenylalanine ammonia-lyase, putative gene phenylalanine ammonia-lyase, putative chr11 28489269 28491523 + CDS,promoter,downstream 9 LOC_Os03g52355 hypothetical protein gene hypothetical protein chr3 30063412 30063775 + CDS,promoter,downstream 9 LOC_Os11g42890 expressed protein gene expressed protein chr11 25368122 25370617 - CDS 9 LOC_Os04g06920 conserved hypothetical protein gene conserved hypothetical protein chr4 3650775 3653508 - CDS,promoter 9 LOC_Os03g56930 app1, putative, expressed gene app1, putative, expressed chr3 32416075 32417468 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g24680 terpene synthase, putative gene terpene synthase, putative chr3 14059341 14065214 + CDS 9 LOC_Os02g51010 membrane associated DUF588 domain containing protein, putative gene membrane associated DUF588 domain containing protein, putative chr2 31193145 31193915 - CDS,promoter 9 LOC_Os04g04210 hypothetical protein gene hypothetical protein chr4 1955225 1957285 + CDS,promoter 9 LOC_Os03g22090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 12655349 12658171 - CDS,downstream 9 LOC_Os03g07510 expressed protein gene expressed protein chr3 3813367 3822212 - CDS,three_prime_UTR,promoter 9 LOC_Os02g19130 transcription factor X1, putative, expressed gene transcription factor X1, putative, expressed chr2 11151747 11156505 + five_prime_UTR,promoter 9 LOC_Os05g50100 expressed protein gene expressed protein chr5 28647675 28648596 - three_prime_UTR,promoter,downstream 9 LOC_Os07g11890 cytochrome P450, putative gene cytochrome P450, putative chr7 6598791 6602472 + CDS,promoter 9 LOC_Os05g31830 aspartyl protease family protein, putative gene aspartyl protease family protein, putative chr5 18472933 18474458 - CDS,downstream 9 LOC_Os06g17120 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein chr6 9920139 9921590 + CDS,promoter,downstream 9 LOC_Os02g56760 OsFBX66 - F-box domain containing protein gene OsFBX66 - F-box domain containing protein chr2 34792412 34795604 + CDS,promoter,downstream 9 LOC_Os01g02780 TAK33, putative, expressed gene TAK33, putative, expressed chr1 968308 972327 - CDS 9 LOC_Os08g08960 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5207388 5208572 + CDS,promoter 9 LOC_Os12g03150 myb-like DNA-binding domain containing protein, putative, expressed gene myb-like DNA-binding domain containing protein, putative, expressed chr12 1199471 1201202 - five_prime_UTR 9 LOC_Os07g32290 hypothetical protein gene hypothetical protein chr7 19191557 19191808 + CDS,promoter,downstream 9 LOC_Os02g21185 hypothetical protein gene hypothetical protein chr2 12567018 12567855 + CDS,three_prime_UTR 9 LOC_Os01g37020 carboxyl-terminal peptidase, putative gene carboxyl-terminal peptidase, putative chr1 20650499 20653839 + CDS,promoter 9 LOC_Os05g39540 metal cation transporter, putative, expressed gene metal cation transporter, putative, expressed chr5 23141972 23150720 + CDS,promoter 9 LOC_Os06g37224 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 21981657 21991536 - five_prime_UTR,CDS,downstream 9 LOC_Os06g08190 expressed protein gene expressed protein chr6 3971479 3972002 - five_prime_UTR,CDS,downstream 9 LOC_Os02g37500 expressed protein gene expressed protein chr2 22630192 22631094 + CDS,promoter,downstream 9 LOC_Os04g04060 dynamin family protein, putative, expressed gene dynamin family protein, putative, expressed chr4 1869479 1872608 - five_prime_UTR,CDS,downstream 9 LOC_Os12g03830 major facilitator superfamily antiporter, putative gene major facilitator superfamily antiporter, putative chr12 1567001 1571324 - CDS,downstream 9 LOC_Os08g14890 expressed protein gene expressed protein chr8 8974243 8976192 + CDS,promoter,downstream 9 LOC_Os12g38100 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr12 23365498 23366323 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g03720 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 1548229 1550011 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g38070 expressed protein gene expressed protein chr11 22111760 22113284 + CDS,promoter 9 LOC_Os12g09530 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 5002516 5005930 - CDS,downstream 9 LOC_Os04g32080 11-beta-hydroxysteroid dehydrogenase, putative, expressed gene 11-beta-hydroxysteroid dehydrogenase, putative, expressed chr4 19064692 19067282 + CDS 9 LOC_Os04g42830 transferase family protein, putative gene transferase family protein, putative chr4 25161740 25163181 - CDS,downstream 9 LOC_Os11g30600 hypothetical protein gene hypothetical protein chr11 17350917 17354214 + CDS,promoter,downstream 9 LOC_Os04g39360 heavy metal transport/detoxification protein, putative gene heavy metal transport/detoxification protein, putative chr4 23243004 23243548 - CDS,promoter,downstream 9 LOC_Os11g44550 protein kinase family protein, putative gene protein kinase family protein, putative chr11 26462556 26463824 + CDS 9 LOC_Os05g30490 harpin-induced protein 1 domain containing protein gene harpin-induced protein 1 domain containing protein chr5 17604096 17604878 + CDS,promoter,downstream 9 LOC_Os01g52514 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr1 30172397 30178106 + CDS,promoter 9 LOC_Os01g06080 conserved hypothetical protein gene conserved hypothetical protein chr1 2900602 2902619 - CDS,promoter 9 LOC_Os08g15770 hypothetical protein gene hypothetical protein chr8 9554046 9555348 + CDS 9 LOC_Os04g01710 cysteine proteinase At4g11310 precursor, putative, expressed gene cysteine proteinase At4g11310 precursor, putative, expressed chr4 470098 471889 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g34280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 19610864 19611484 + CDS,downstream 9 LOC_Os02g44130 ZOS2-14 - C2H2 zinc finger protein, expressed gene ZOS2-14 - C2H2 zinc finger protein, expressed chr2 26683557 26685043 + three_prime_UTR,downstream 9 LOC_Os11g07430 proteophosphoglycan ppg1, putative, expressed gene proteophosphoglycan ppg1, putative, expressed chr11 3733011 3734936 - three_prime_UTR 9 LOC_Os12g43440 thaumatin, putative, expressed gene thaumatin, putative, expressed chr12 26922541 26923293 - CDS,three_prime_UTR,promoter 9 LOC_Os03g24560 ompA/MotB, putative, expressed gene ompA/MotB, putative, expressed chr3 13994527 13995364 - CDS,three_prime_UTR 9 LOC_Os06g04940 early nodulin 93 ENOD93 protein, putative, expressed gene early nodulin 93 ENOD93 protein, putative, expressed chr6 2174883 2175927 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g31940 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr11 18303878 18306484 + CDS,three_prime_UTR 9 LOC_Os01g13610 isoflavone reductase homolog IRL, putative, expressed gene isoflavone reductase homolog IRL, putative, expressed chr1 7618080 7623561 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g04630 hypothetical protein gene hypothetical protein chr10 2210995 2211884 + CDS,downstream 9 LOC_Os11g45950 NAC domain-containing protein 90, putative, expressed gene NAC domain-containing protein 90, putative, expressed chr11 27332563 27333353 - CDS,promoter,downstream 9 LOC_Os05g18940 STIGL3 - Stigma-specific Stig1 family protein precursor, putative gene STIGL3 - Stigma-specific Stig1 family protein precursor, putative chr5 10990847 10991254 + CDS,promoter,downstream 9 LOC_Os03g59790 EF hand family protein, putative gene EF hand family protein, putative chr3 34043316 34043918 + CDS,promoter 9 LOC_Os02g06950 no apical meristem protein, putative gene no apical meristem protein, putative chr2 3522907 3529541 - CDS,downstream 9 LOC_Os08g43410 LRP1, putative, expressed gene LRP1, putative, expressed chr8 27455593 27457220 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os04g46630 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr4 27460458 27462380 + five_prime_UTR,CDS,promoter 9 LOC_Os02g49840 OsMADS57 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS57 - MADS-box family gene with MIKCc type-box, expressed chr2 30450797 30456890 + five_prime_UTR,promoter 9 LOC_Os10g05950 POEI11 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI11 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2998273 3000231 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g37570 keratin-associated protein 5-3, putative gene keratin-associated protein 5-3, putative chr2 22656695 22657526 + CDS,promoter,downstream 9 LOC_Os08g05410 conserved hypothetical protein gene conserved hypothetical protein chr8 2851462 2856613 + CDS 9 LOC_Os06g02054 OsFBX180 - F-box domain containing protein gene OsFBX180 - F-box domain containing protein chr6 596333 600697 + CDS,promoter,downstream 9 LOC_Os12g27970 hypothetical protein gene hypothetical protein chr12 16488854 16490200 + CDS 9 LOC_Os03g43440 CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr3 24224303 24226009 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g22210 SCP-like extracellular protein gene SCP-like extracellular protein chr4 12576076 12577626 + CDS 9 LOC_Os01g65300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 37884920 37885534 - CDS,promoter,downstream 9 LOC_Os12g41020 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 25348084 25349022 - CDS,downstream 9 LOC_Os01g61160 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr1 35401752 35404266 + five_prime_UTR,CDS,promoter 9 LOC_Os05g02610 hypothetical protein gene hypothetical protein chr5 909651 910509 + CDS,promoter,downstream 9 LOC_Os09g24350 THION32 - Plant thionin family protein precursor, expressed gene THION32 - Plant thionin family protein precursor, expressed chr9 14472047 14473027 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g12240 hypothetical protein gene hypothetical protein chr1 6688709 6692866 + CDS,promoter,downstream 9 LOC_Os01g10230 lachrymatory factor synthase, putative, expressed gene lachrymatory factor synthase, putative, expressed chr1 5383196 5384088 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g24510 glycosyl transferase 8 domain containing protein, putative, expressed gene glycosyl transferase 8 domain containing protein, putative, expressed chr3 13968828 13970610 + three_prime_UTR,promoter 9 LOC_Os03g38390 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr3 21305168 21312030 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os10g34690 unknown gene unknown chr10 18426351 18427454 - CDS,downstream 9 LOC_Os05g10620 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr5 5784079 5789498 - CDS 9 LOC_Os01g28290 conserved hypothetical protein gene conserved hypothetical protein chr1 15845199 15846668 - CDS 9 LOC_Os01g39160 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr1 22038545 22039060 + CDS,downstream 9 LOC_Os04g12970 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed gene UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed chr4 7152090 7155090 - CDS 9 LOC_Os06g42910 expressed protein gene expressed protein chr6 25784601 25786710 + five_prime_UTR,CDS,promoter 9 LOC_Os01g01470 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr1 240641 242468 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g38610 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 21686356 21688884 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os05g42428 hypothetical protein gene hypothetical protein chr5 24814219 24815066 - CDS,promoter,downstream 9 LOC_Os11g47590 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28232565 28233939 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os07g36280 OsFBX241 - F-box domain containing protein gene OsFBX241 - F-box domain containing protein chr7 21691602 21693804 - CDS,downstream 9 LOC_Os11g45390 von Willebrand factor type A domain containing protein, putative gene von Willebrand factor type A domain containing protein, putative chr11 26995987 27003253 - CDS,promoter 9 LOC_Os12g44270 glycine-rich protein, putative gene glycine-rich protein, putative chr12 27410275 27410646 - CDS,promoter,downstream 9 LOC_Os07g11739 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr7 6493470 6501016 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g12320 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr6 6677246 6679865 + five_prime_UTR,CDS,promoter 9 LOC_Os07g46860 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr7 28012827 28013690 + CDS,downstream 9 LOC_Os06g37300 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 22019843 22027149 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g43350 expressed protein gene expressed protein chr3 24166723 24169701 - CDS,three_prime_UTR,promoter 9 LOC_Os03g49680 hypothetical protein gene hypothetical protein chr3 28285488 28286986 - CDS,promoter,downstream 9 LOC_Os12g40300 SKP1, putative, expressed gene SKP1, putative, expressed chr12 24924402 24927693 + CDS,three_prime_UTR 9 LOC_Os01g09230 expressed protein gene expressed protein chr1 4649095 4650961 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g16980 OsWAK86 - OsWAK pseudogene gene OsWAK86 - OsWAK pseudogene chr9 10377531 10380849 - CDS,promoter,downstream 9 LOC_Os09g16210 hypothetical protein gene hypothetical protein chr9 9896097 9897478 - CDS,promoter 9 LOC_Os02g09310 cytochrome P450, putative gene cytochrome P450, putative chr2 4791454 4793238 + CDS,downstream 9 LOC_Os11g40009 phospholipase, patatin family, putative, expressed gene phospholipase, patatin family, putative, expressed chr11 23385892 23394750 + three_prime_UTR,downstream 9 LOC_Os05g11580 expressed protein gene expressed protein chr5 6559588 6560293 + five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os02g53480 hypothetical protein gene hypothetical protein chr2 32711190 32712443 + CDS 9 LOC_Os09g39250 expressed protein gene expressed protein chr9 22547558 22552244 - five_prime_UTR,downstream 9 LOC_Os06g10310 growth regulating factor protein, putative, expressed gene growth regulating factor protein, putative, expressed chr6 5299137 5300474 + three_prime_UTR,downstream 9 LOC_Os11g26390 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr11 14650449 14651622 - CDS 9 LOC_Os06g44300 WAX2, putative, expressed gene WAX2, putative, expressed chr6 26735606 26743119 + CDS,three_prime_UTR,promoter 9 LOC_Os08g32390 hypothetical protein gene hypothetical protein chr8 20057954 20059036 + CDS,downstream 9 LOC_Os06g38110 expressed protein gene expressed protein chr6 22549994 22550899 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g40680 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed gene MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed chr11 23812492 23814035 - CDS,three_prime_UTR 9 LOC_Os04g54850 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr4 32440692 32444024 + CDS,three_prime_UTR 9 LOC_Os01g18440 OsMADS89 - MADS-box family gene with M-gamma type-box gene OsMADS89 - MADS-box family gene with M-gamma type-box chr1 10365387 10366307 + CDS,promoter 9 LOC_Os07g40380 expressed protein gene expressed protein chr7 24209975 24211740 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g41720 auxin efflux carrier component, putative gene auxin efflux carrier component, putative chr8 26329609 26332845 - CDS,downstream 9 LOC_Os10g39310 aspartic proteinase nepenthesin precursor, putative, expressed gene aspartic proteinase nepenthesin precursor, putative, expressed chr10 20907541 20908689 + CDS,promoter 9 LOC_Os02g05590 ribosome inactivating protein, putative gene ribosome inactivating protein, putative chr2 2712289 2712957 + CDS,promoter,downstream 9 LOC_Os07g28880 hypothetical protein gene hypothetical protein chr7 16931188 16931640 - CDS,downstream 9 LOC_Os09g23820 cytochrome P450 72A1, putative, expressed gene cytochrome P450 72A1, putative, expressed chr9 14193356 14195589 - CDS,promoter 9 LOC_Os06g14010 myb-like DNA-binding domain containing protein gene myb-like DNA-binding domain containing protein chr6 7791173 7791682 - CDS,promoter 9 LOC_Os06g19970 expressed protein gene expressed protein chr6 11447727 11449808 - three_prime_UTR 9 LOC_Os02g46460 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr2 28306720 28310329 - five_prime_UTR,CDS,downstream 9 LOC_Os08g10000 hypothetical protein gene hypothetical protein chr8 5779809 5780204 - CDS,promoter,downstream 9 LOC_Os05g03972 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr5 1785119 1791265 - CDS,three_prime_UTR,downstream 9 LOC_Os03g25120 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr3 14341368 14344264 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g68000 AML1, putative, expressed gene AML1, putative, expressed chr1 39522595 39526184 + CDS,downstream 9 LOC_Os01g50680 OsSub2 - Putative Subtilisin homologue, expressed gene OsSub2 - Putative Subtilisin homologue, expressed chr1 29103839 29108090 + CDS,promoter 9 LOC_Os11g32750 hydrolase, NUDIX family, domain containing protein, expressed gene hydrolase, NUDIX family, domain containing protein, expressed chr11 18886527 18891119 + five_prime_UTR,CDS 9 LOC_Os07g44920 expressed protein gene expressed protein chr7 26801466 26802481 + three_prime_UTR,promoter,downstream 9 LOC_Os03g26070 conserved hypothetical protein gene conserved hypothetical protein chr3 14935322 14936666 + CDS,promoter 9 LOC_Os11g08600 hypothetical protein gene hypothetical protein chr11 4565018 4567366 + CDS,promoter 9 LOC_Os06g22490 sphingolipid C4-hydroxylase SUR2, putative gene sphingolipid C4-hydroxylase SUR2, putative chr6 13069022 13069936 - CDS,downstream 9 LOC_Os06g01890 MADS-box transcription factor, putative, expressed gene MADS-box transcription factor, putative, expressed chr6 493851 510407 + CDS,downstream 9 LOC_Os09g16950 cysteine-rich receptor-like protein kinase 25 precursor, putative, expressed gene cysteine-rich receptor-like protein kinase 25 precursor, putative, expressed chr9 10364053 10367261 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g57610 OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed gene OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed chr1 33307404 33310347 + CDS,promoter 9 LOC_Os12g27102 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed gene glycerophosphoryl diester phosphodiesterase family protein, putative, expressed chr12 15891899 15896804 - CDS,three_prime_UTR,five_prime_UTR 9 LOC_Os11g12760 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr11 7211096 7212614 - CDS,promoter,downstream 9 LOC_Os10g39350 aspartic proteinase nepenthesin, putative, expressed gene aspartic proteinase nepenthesin, putative, expressed chr10 20925856 20927046 + CDS,downstream 9 LOC_Os06g39640 PINHEAD, putative, expressed gene PINHEAD, putative, expressed chr6 23539785 23546202 + CDS 9 LOC_Os03g45120 ribosome inactivating protein, putative, expressed gene ribosome inactivating protein, putative, expressed chr3 25460960 25466346 - CDS 9 LOC_Os12g44350 actin, putative, expressed gene actin, putative, expressed chr12 27458264 27459654 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g08020 ankyrin repeat family protein, putative, expressed gene ankyrin repeat family protein, putative, expressed chr11 4164088 4171068 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g03000 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr3 1225696 1226858 + CDS,promoter,downstream 9 LOC_Os02g17620 isochorismatase family protein, putative, expressed gene isochorismatase family protein, putative, expressed chr2 10135283 10143835 - CDS,downstream 9 LOC_Os10g04900 OsFBX364 - F-box domain containing protein, expressed gene OsFBX364 - F-box domain containing protein, expressed chr10 2385122 2391746 + CDS,promoter 9 LOC_Os04g38470 expressed protein gene expressed protein chr4 22680743 22681818 + five_prime_UTR,CDS 9 LOC_Os11g44570 hypothetical protein gene hypothetical protein chr11 26478186 26479579 + CDS,promoter 9 LOC_Os01g66870 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 38825440 38838958 - CDS,promoter 9 LOC_Os04g31530 hypothetical protein gene hypothetical protein chr4 18687462 18688908 - CDS,promoter,downstream 9 LOC_Os05g16180 NB-ARC domain containing protein gene NB-ARC domain containing protein chr5 9144487 9149729 - CDS 9 LOC_Os07g30990 ubiquitin family protein, putative gene ubiquitin family protein, putative chr7 18354007 18354646 + CDS,downstream 9 LOC_Os03g22110 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr3 12667932 12668318 + CDS,promoter,downstream 9 LOC_Os11g05790 conserved hypothetical protein gene conserved hypothetical protein chr11 2673472 2675730 + CDS,downstream 9 LOC_Os11g43720 hypothetical protein gene hypothetical protein chr11 25927414 25928867 - CDS,promoter 9 LOC_Os06g24070 myb-like DNA-binding domain containing protein, expressed gene myb-like DNA-binding domain containing protein, expressed chr6 14077259 14081304 + CDS 9 LOC_Os04g26120 TNP1, putative gene TNP1, putative chr4 15199656 15204462 - CDS,downstream 9 LOC_Os04g29950 wall-associated receptor kinase, putative gene wall-associated receptor kinase, putative chr4 17693417 17696813 - CDS,downstream 9 LOC_Os06g08900 glutamate receptor 2.6 precursor, putative, expressed gene glutamate receptor 2.6 precursor, putative, expressed chr6 4480241 4486784 - CDS,promoter,downstream 9 LOC_Os03g54160 OsMADS14 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS14 - MADS-box family gene with MIKCc type-box, expressed chr3 31024033 31034456 - CDS,downstream 9 LOC_Os03g61480 uncharacterized Cys-rich domain containing protein, putative gene uncharacterized Cys-rich domain containing protein, putative chr3 34866780 34867410 - CDS,promoter,downstream 9 LOC_Os02g15840 hypothetical protein gene hypothetical protein chr2 8956012 8956689 - CDS,promoter,downstream 9 LOC_Os08g36390 ZOS8-07 - C2H2 zinc finger protein, expressed gene ZOS8-07 - C2H2 zinc finger protein, expressed chr8 22968912 22972196 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g22230 POEI47 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI47 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr3 12752301 12753385 - five_prime_UTR,CDS,downstream 9 LOC_Os08g01690 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr8 398649 400424 - five_prime_UTR,downstream 9 LOC_Os12g43730 expressed protein gene expressed protein chr12 27128865 27134102 + CDS 9 LOC_Os09g31980 DC1 domain-containing protein, putative gene DC1 domain-containing protein, putative chr9 19082298 19084139 - CDS,promoter,downstream 9 LOC_Os02g06760 expressed protein gene expressed protein chr2 3411218 3415303 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g06280 expressed protein gene expressed protein chr12 2995187 2995813 + CDS,three_prime_UTR 9 LOC_Os09g27630 hypothetical protein gene hypothetical protein chr9 16791513 16794853 - CDS,promoter 9 LOC_Os03g38470 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr3 21352028 21355323 + CDS,downstream 9 LOC_Os12g04070 hypothetical protein gene hypothetical protein chr12 1711516 1711776 + CDS,promoter,downstream 9 LOC_Os07g31350 hypothetical protein gene hypothetical protein chr7 18571755 18574013 - CDS 9 LOC_Os01g56360 wax synthase, putative, expressed gene wax synthase, putative, expressed chr1 32474099 32478104 - five_prime_UTR,CDS,downstream 9 LOC_Os05g51400 protein kinase APK1B, chloroplast precursor, putative gene protein kinase APK1B, chloroplast precursor, putative chr5 29418288 29422453 + CDS,promoter 9 LOC_Os06g44010 OsWRKY28 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY28 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr6 26508922 26510702 - three_prime_UTR 9 LOC_Os01g23970 cysteine-rich receptor protein kinase, putative gene cysteine-rich receptor protein kinase, putative chr1 13486879 13489925 + CDS 9 LOC_Os11g32650 chalcone synthase, putative, expressed gene chalcone synthase, putative, expressed chr11 18811245 18814704 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g29730 RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL28 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr6 17065922 17067621 - CDS 9 LOC_Os07g48020 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 28672762 28674441 + five_prime_UTR,CDS,promoter 9 LOC_Os01g62190 ZOS1-15 - C2H2 zinc finger protein, expressed gene ZOS1-15 - C2H2 zinc finger protein, expressed chr1 36000198 36001060 + five_prime_UTR,promoter 9 LOC_Os06g23910 expressed protein gene expressed protein chr6 13970338 13972751 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g06710 hypothetical protein gene hypothetical protein chr11 3265561 3266771 - CDS,promoter 9 LOC_Os10g40859 matrixin family protein gene matrixin family protein chr10 21890877 21896676 - CDS 9 LOC_Os06g38870 hypothetical protein gene hypothetical protein chr6 23065612 23067154 + CDS,promoter 9 LOC_Os06g49970 alpha-amylase precursor, putative, expressed gene alpha-amylase precursor, putative, expressed chr6 30261780 30265917 + CDS 9 LOC_Os01g57390 lysM domain containing protein, putative, expressed gene lysM domain containing protein, putative, expressed chr1 33176178 33176701 - CDS,promoter,downstream 9 LOC_Os02g56720 cinnamoyl CoA reductase, putative, expressed gene cinnamoyl CoA reductase, putative, expressed chr2 34763775 34765320 + five_prime_UTR,promoter 9 LOC_Os12g31040 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 18620530 18629604 + CDS,promoter 9 LOC_Os01g21810 hypothetical protein gene hypothetical protein chr1 12231509 12233741 + CDS,promoter 9 LOC_Os11g24484 estradiol 17-beta-dehydrogenase 12, putative, expressed gene estradiol 17-beta-dehydrogenase 12, putative, expressed chr11 13492722 13500811 + CDS,promoter 9 LOC_Os01g56370 wax synthase, putative, expressed gene wax synthase, putative, expressed chr1 32483692 32488927 - CDS,promoter,downstream 9 LOC_Os03g22210 POEI46 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI46 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr3 12737862 12739270 - five_prime_UTR,downstream 9 LOC_Os06g11270 anthocyanidin 3-O-glucosyltransferase, putative, expressed gene anthocyanidin 3-O-glucosyltransferase, putative, expressed chr6 5907096 5908469 - CDS,promoter 9 LOC_Os04g19800 F-box domain containing protein, expressed gene F-box domain containing protein, expressed chr4 11051052 11052764 - three_prime_UTR 9 LOC_Os08g16620 hypothetical protein gene hypothetical protein chr8 10167367 10168449 + CDS,promoter 9 LOC_Os11g37700 pleiotropic drug resistance protein, putative, expressed gene pleiotropic drug resistance protein, putative, expressed chr11 21806691 21816309 - five_prime_UTR,CDS,downstream 9 LOC_Os05g16100 hypothetical protein gene hypothetical protein chr5 9102342 9104432 - CDS 9 LOC_Os07g39320 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr7 23558527 23559875 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g36860 pathogenesis-related protein 10, putative, expressed gene pathogenesis-related protein 10, putative, expressed chr12 22561808 22563439 + five_prime_UTR,CDS,promoter 9 LOC_Os07g05700 hypothetical protein gene hypothetical protein chr7 2721025 2722460 - CDS,promoter 9 LOC_Os12g09710 NBS-LRR disease resistance protein, putative gene NBS-LRR disease resistance protein, putative chr12 5124188 5128660 + CDS,promoter 9 LOC_Os08g17330 hypothetical protein gene hypothetical protein chr8 10602153 10603943 + CDS 9 LOC_Os02g19690 hypothetical protein gene hypothetical protein chr2 11521363 11523768 - CDS 9 LOC_Os06g13910 hypothetical protein gene hypothetical protein chr6 7748309 7748548 - CDS,promoter,downstream 9 LOC_Os12g31710 universal stress protein domain containing protein, putative, expressed gene universal stress protein domain containing protein, putative, expressed chr12 19060571 19064397 - CDS 9 LOC_Os09g20090 L-ascorbate oxidase precursor, putative, expressed gene L-ascorbate oxidase precursor, putative, expressed chr9 12028911 12034267 - five_prime_UTR,downstream 9 LOC_Os03g18030 leucoanthocyanidin dioxygenase, putative, expressed gene leucoanthocyanidin dioxygenase, putative, expressed chr3 10037776 10043365 - five_prime_UTR 9 LOC_Os08g11520 hypothetical protein gene hypothetical protein chr8 6752645 6754303 + CDS,promoter 9 LOC_Os11g28370 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 15870584 15873415 + CDS,downstream 9 LOC_Os01g22780 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 12803553 12809198 + CDS,promoter 9 LOC_Os03g44250 hypothetical protein gene hypothetical protein chr3 24863579 24864427 - CDS,promoter,downstream 9 LOC_Os03g10090 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr3 5097240 5099693 + five_prime_UTR,promoter 9 LOC_Os07g03250 AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed gene AP2-like ethylene-responsive transcription factor PLETHORA 2, putative, expressed chr7 1298598 1303299 + five_prime_UTR,promoter 9 LOC_Os08g33010 OsFBDUF45 - F-box and DUF domain containing protein gene OsFBDUF45 - F-box and DUF domain containing protein chr8 20477379 20478813 - CDS,downstream 9 LOC_Os03g09910 aminotransferase, classes I and II, domain containing protein, expressed gene aminotransferase, classes I and II, domain containing protein, expressed chr3 4935474 4940039 + CDS,promoter 9 LOC_Os05g37600 glycerol-3-phosphate acyltransferase, putative, expressed gene glycerol-3-phosphate acyltransferase, putative, expressed chr5 21942638 21946418 + CDS,three_prime_UTR,promoter 9 LOC_Os03g32230 ZOS3-12 - C2H2 zinc finger protein, expressed gene ZOS3-12 - C2H2 zinc finger protein, expressed chr3 18434771 18435872 - three_prime_UTR,downstream 9 LOC_Os01g41230 hypothetical protein gene hypothetical protein chr1 23337812 23338239 - CDS,promoter,downstream 9 LOC_Os03g62670 expressed protein gene expressed protein chr3 35460499 35462683 + CDS 9 LOC_Os01g72910 abscisic stress-ripening, putative, expressed gene abscisic stress-ripening, putative, expressed chr1 42281788 42282588 + five_prime_UTR,CDS,promoter 9 LOC_Os03g31750 pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed gene pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed chr3 18151925 18158909 - five_prime_UTR,CDS,downstream 9 LOC_Os09g35570 hypothetical protein gene hypothetical protein chr9 20435985 20439435 - CDS,promoter,downstream 9 LOC_Os05g37060 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr5 21591624 21592822 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g38450 vignain precursor, putative, expressed gene vignain precursor, putative, expressed chr6 22778412 22780112 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g34400 lipase class 3 family protein, putative gene lipase class 3 family protein, putative chr7 20624098 20625694 - CDS,promoter 9 LOC_Os07g05180 Skp1 family, dimerisation domain containing protein gene Skp1 family, dimerisation domain containing protein chr7 2310419 2310913 + CDS,promoter,downstream 9 LOC_Os06g41570 hypothetical protein gene hypothetical protein chr6 24912100 24912582 - CDS,promoter,downstream 9 LOC_Os01g01770 ZOS1-01 - C2H2 zinc finger protein gene ZOS1-01 - C2H2 zinc finger protein chr1 408700 409818 + CDS,promoter,downstream 9 LOC_Os12g30980 hypothetical protein gene hypothetical protein chr12 18578968 18583737 - CDS 9 LOC_Os11g42470 hypothetical protein gene hypothetical protein chr11 25116149 25116608 + CDS,promoter 9 LOC_Os03g20120 glycosyl transferase 8 domain containing protein, putative, expressed gene glycosyl transferase 8 domain containing protein, putative, expressed chr3 11365917 11367637 + three_prime_UTR 9 LOC_Os03g21710 WRKY45 transcription factor, putative, expressed gene WRKY45 transcription factor, putative, expressed chr3 12393387 12395616 + CDS,promoter 9 LOC_Os03g58610 expressed protein gene expressed protein chr3 33377823 33380109 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g30660 hypothetical protein gene hypothetical protein chr2 18266470 18266694 + CDS,promoter,downstream 9 LOC_Os04g37640 xyloglucan fucosyltransferase, putative, expressed gene xyloglucan fucosyltransferase, putative, expressed chr4 22196223 22198414 - five_prime_UTR,CDS,downstream 9 LOC_Os07g44470 hypothetical protein gene hypothetical protein chr7 26559318 26560008 + CDS,promoter,downstream 9 LOC_Os12g42290 hypothetical protein gene hypothetical protein chr12 26264717 26265314 + CDS,promoter,downstream 9 LOC_Os11g05690 amino acid permease family protein, putative, expressed gene amino acid permease family protein, putative, expressed chr11 2592392 2598651 + CDS 9 LOC_Os02g13670 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr2 7333138 7334086 - CDS 9 LOC_Os05g11340 hypothetical protein gene hypothetical protein chr5 6408903 6409798 - CDS 9 LOC_Os11g18570 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr11 10469409 10472294 + CDS 9 LOC_Os04g30010 OsWAK45 - OsWAK receptor-like protein kinase, expressed gene OsWAK45 - OsWAK receptor-like protein kinase, expressed chr4 17734138 17737843 - CDS,downstream 9 LOC_Os11g24230 hypothetical protein gene hypothetical protein chr11 13332064 13335001 + CDS 9 LOC_Os07g41960 hypothetical protein gene hypothetical protein chr7 25125478 25126003 - CDS,promoter,downstream 9 LOC_Os08g04590 csAtPR5, putative gene csAtPR5, putative chr8 2288393 2292618 + CDS 9 LOC_Os06g35080 F-box domain containing protein gene F-box domain containing protein chr6 20417778 20418955 + CDS,downstream 9 LOC_Os03g42550 hypothetical protein gene hypothetical protein chr3 23687668 23689905 + CDS 9 LOC_Os07g38700 hypothetical protein gene hypothetical protein chr7 23227329 23228312 + CDS,promoter,downstream 9 LOC_Os07g48260 OsWRKY47 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY47 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr7 28827801 28831406 - five_prime_UTR,CDS 9 LOC_Os05g46940 hypothetical protein gene hypothetical protein chr5 27099218 27100421 + CDS,promoter 9 LOC_Os01g53770 expressed protein gene expressed protein chr1 30904541 30905215 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os10g20730 hypothetical protein gene hypothetical protein chr10 10432131 10432523 + CDS,promoter,downstream 9 LOC_Os11g14490 conserved hypothetical protein gene conserved hypothetical protein chr11 8135463 8136214 - CDS,promoter 9 LOC_Os04g56170 OsSPL8 - SBP-box gene family member, expressed gene OsSPL8 - SBP-box gene family member, expressed chr4 33303396 33307760 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g43820 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr2 26450581 26452125 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g44670 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr4 26253380 26255318 - three_prime_UTR,promoter,downstream 9 LOC_Os09g13680 ZOS9-04 - C2H2 zinc finger protein gene ZOS9-04 - C2H2 zinc finger protein chr9 7994738 7995963 + CDS,promoter,downstream 9 LOC_Os09g31019 ubiquitin fusion protein, putative gene ubiquitin fusion protein, putative chr9 18663103 18664945 + five_prime_UTR,CDS,promoter 9 LOC_Os04g25220 hypothetical protein gene hypothetical protein chr4 14571376 14571753 + CDS,promoter 9 LOC_Os01g41310 OsFBX18 - F-box domain containing protein, expressed gene OsFBX18 - F-box domain containing protein, expressed chr1 23375554 23377550 + CDS,three_prime_UTR,downstream 9 LOC_Os04g38560 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr4 22725279 22727313 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g46519 unknown gene unknown chr1 26484084 26484269 - CDS,downstream 9 LOC_Os03g48740 indole-3-acetate beta-glucosyltransferase, putative gene indole-3-acetate beta-glucosyltransferase, putative chr3 27768393 27771480 + CDS,promoter,downstream 9 LOC_Os03g43400 OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA11 - Auxin-responsive Aux/IAA gene family member, expressed chr3 24196728 24200100 - CDS,downstream 9 LOC_Os04g46580 OsSPL7 - SBP-box gene family member, expressed gene OsSPL7 - SBP-box gene family member, expressed chr4 27429637 27432863 + CDS,promoter 9 LOC_Os03g06800 hypothetical protein gene hypothetical protein chr3 3451738 3452004 - CDS,promoter,downstream 9 LOC_Os10g37540 OsFBDUF48 - F-box and DUF domain containing protein, expressed gene OsFBDUF48 - F-box and DUF domain containing protein, expressed chr10 20026865 20028536 + five_prime_UTR,CDS,promoter 9 LOC_Os10g38720 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr10 20557566 20558474 + five_prime_UTR,promoter 9 LOC_Os04g55760 OsWAK55 - OsWAK receptor-like protein kinase gene OsWAK55 - OsWAK receptor-like protein kinase chr4 33007511 33011019 + CDS 9 LOC_Os12g29605 expressed protein gene expressed protein chr12 17654890 17655316 - CDS,three_prime_UTR,promoter 9 LOC_Os10g29380 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr10 15197359 15198471 + CDS,promoter,downstream 9 LOC_Os10g33760 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr10 17777861 17780170 + CDS,three_prime_UTR,promoter 9 LOC_Os03g61770 hypothetical protein gene hypothetical protein chr3 35011059 35013424 + CDS,promoter 9 LOC_Os06g21020 methyltransferase, putative gene methyltransferase, putative chr6 12140325 12144412 - CDS 9 LOC_Os11g38120 OsFBDUF56 - F-box and DUF domain containing protein, expressed gene OsFBDUF56 - F-box and DUF domain containing protein, expressed chr11 22138745 22140460 + CDS 9 LOC_Os01g52690 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 30292898 30295533 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g63970 gibberellin 20 oxidase 1, putative, expressed gene gibberellin 20 oxidase 1, putative, expressed chr3 36143590 36145443 + three_prime_UTR,downstream 9 LOC_Os02g49370 histone-like transcription factor and archaeal histone, putative, expressed gene histone-like transcription factor and archaeal histone, putative, expressed chr2 30158404 30159572 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g41870 glycine-rich cell wall protein, putative, expressed gene glycine-rich cell wall protein, putative, expressed chr5 24456244 24457161 - three_prime_UTR,promoter,downstream 9 LOC_Os07g03499 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1400702 1401231 + five_prime_UTR,CDS,promoter 9 LOC_Os11g20090 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr11 11585820 11590485 - five_prime_UTR,CDS,downstream 9 LOC_Os01g70150 hypothetical protein gene hypothetical protein chr1 40600251 40601370 + CDS,promoter 9 LOC_Os01g11790 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 6376261 6381037 + CDS,promoter 9 LOC_Os03g58940 LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr3 33556572 33559643 + five_prime_UTR,CDS 9 LOC_Os08g44950 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr8 28217599 28218324 - CDS,promoter,downstream 9 LOC_Os08g16359 expressed protein gene expressed protein chr8 9983349 9984272 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g55240 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr4 32667029 32668315 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g17500 cinnamoyl-CoA reductase, putative, expressed gene cinnamoyl-CoA reductase, putative, expressed chr8 10717586 10719796 + five_prime_UTR,CDS,promoter 9 LOC_Os02g17170 hypothetical protein gene hypothetical protein chr2 9836945 9838024 + CDS,promoter,downstream 9 LOC_Os05g01920 inhibitor I family protein, putative gene inhibitor I family protein, putative chr5 528789 529004 - CDS,downstream 9 LOC_Os07g01790 hypothetical protein gene hypothetical protein chr7 461897 462106 + CDS,promoter,downstream 9 LOC_Os02g07310 argonaute, putative, expressed gene argonaute, putative, expressed chr2 3748360 3755489 - five_prime_UTR,CDS,downstream 9 LOC_Os11g29840 expressed protein gene expressed protein chr11 16852770 16858293 + CDS,promoter 9 LOC_Os06g16740 hypothetical protein gene hypothetical protein chr6 9654226 9659017 - CDS 9 LOC_Os03g43410 OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed chr3 24210633 24211939 + CDS,three_prime_UTR,downstream 9 LOC_Os07g05630 OsGrx_C10 - glutaredoxin subgroup III, expressed gene OsGrx_C10 - glutaredoxin subgroup III, expressed chr7 2677499 2678215 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g08310 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 4760988 4767003 + CDS,downstream 9 LOC_Os04g56700 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed gene naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed chr4 33624235 33627190 - CDS,promoter,downstream 9 LOC_Os11g02389 protease inhibitor/seed storage/LTP family, putative, expressed gene protease inhibitor/seed storage/LTP family, putative, expressed chr11 702051 702963 + CDS,three_prime_UTR 9 LOC_Os04g08550 oxidoreductase, aldo/keto reductase family protein, putative, expressed gene oxidoreductase, aldo/keto reductase family protein, putative, expressed chr4 4633581 4636532 - CDS 9 LOC_Os07g09020 argonaute, putative, expressed gene argonaute, putative, expressed chr7 4701864 4711518 - CDS 9 LOC_Os12g35330 OsGrx_C12 - glutaredoxin subgroup III gene OsGrx_C12 - glutaredoxin subgroup III chr12 21435691 21436002 + CDS,promoter,downstream 9 LOC_Os02g26290 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed gene fasciclin-like arabinogalactan protein 8 precursor, putative, expressed chr2 15430699 15431764 - three_prime_UTR,downstream 9 LOC_Os02g16780 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr2 9569675 9570572 + CDS,promoter,downstream 9 LOC_Os06g07390 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 3550015 3554476 + CDS 9 LOC_Os10g01640 decarboxylase, putative gene decarboxylase, putative chr10 426430 429405 + CDS,promoter 9 LOC_Os02g29090 expressed protein gene expressed protein chr2 17217744 17221458 + CDS 9 LOC_Os02g30450 harpin-induced protein 1 domain containing protein gene harpin-induced protein 1 domain containing protein chr2 18131447 18132199 - CDS,promoter,downstream 9 LOC_Os05g13630 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr5 7558014 7559147 + three_prime_UTR,promoter,downstream 9 LOC_Os07g44080 hypothetical protein gene hypothetical protein chr7 26346358 26349232 + CDS,promoter,downstream 9 LOC_Os12g41980 lipase class 3 family protein, putative gene lipase class 3 family protein, putative chr12 26000435 26001631 - CDS,promoter,downstream 9 LOC_Os09g23610 hypothetical protein gene hypothetical protein chr9 14024469 14025794 + CDS,promoter,downstream 9 LOC_Os02g31910 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr2 18839390 18845973 - five_prime_UTR,downstream 9 LOC_Os05g02420 expressed protein gene expressed protein chr5 801069 803446 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os01g33869 expressed protein gene expressed protein chr1 18625075 18640716 + five_prime_UTR,CDS,promoter 9 LOC_Os01g45570 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr1 25879160 25882674 - five_prime_UTR,CDS,downstream 9 LOC_Os11g08760 pectinesterase family protein gene pectinesterase family protein chr11 4654891 4658106 + CDS 9 LOC_Os09g17344 expressed protein gene expressed protein chr9 10620786 10622953 + five_prime_UTR,CDS 9 LOC_Os01g13740 myb-like DNA-binding domain containing protein, expressed gene myb-like DNA-binding domain containing protein, expressed chr1 7685884 7692987 - CDS,three_prime_UTR 9 LOC_Os11g02530 OsWRKY40 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY40 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr11 786543 788031 - five_prime_UTR,CDS,downstream 9 LOC_Os08g37730 helix-loop-helix DNA-binding protein, putative, expressed gene helix-loop-helix DNA-binding protein, putative, expressed chr8 23891827 23893930 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os07g39810 lipase class 3 family protein, putative, expressed gene lipase class 3 family protein, putative, expressed chr7 23850288 23851455 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g54550 OsFBX63 - F-box domain containing protein gene OsFBX63 - F-box domain containing protein chr2 33406395 33408410 + CDS,promoter 9 LOC_Os01g52430 hAT dimerisation domain-containing protein, putative, expressed gene hAT dimerisation domain-containing protein, putative, expressed chr1 30123906 30127911 + CDS,promoter 9 LOC_Os02g56600 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr2 34667123 34670552 + CDS,promoter,downstream 9 LOC_Os10g05990 POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI14 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 3019678 3021114 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g53570 aluminum-activated malate transporter, putative, expressed gene aluminum-activated malate transporter, putative, expressed chr1 30763045 30765544 + CDS,promoter,downstream 9 LOC_Os07g43160 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed gene uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed chr7 25866218 25870239 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g17840 ubiquitin family protein, expressed gene ubiquitin family protein, expressed chr12 10208919 10209849 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g38380 aspartic proteinase nepenthesin, putative gene aspartic proteinase nepenthesin, putative chr9 22095603 22096898 - CDS,downstream 9 LOC_Os05g03960 hypothetical protein gene hypothetical protein chr5 1781643 1782358 + CDS,promoter,downstream 9 LOC_Os04g03530 cysteine-rich receptor-like protein kinase 37 precursor, putative gene cysteine-rich receptor-like protein kinase 37 precursor, putative chr4 1530475 1532314 + CDS,downstream 9 LOC_Os11g11680 LGC1, putative gene LGC1, putative chr11 6490551 6490961 + CDS,promoter 9 LOC_Os02g50200 cysteine-rich repeat secretory protein precursor, putative, expressed gene cysteine-rich repeat secretory protein precursor, putative, expressed chr2 30649418 30650583 + three_prime_UTR,downstream 9 LOC_Os05g46530 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr5 26885746 26887190 + CDS 9 LOC_Os06g30690 alcohol oxidase-related, putative gene alcohol oxidase-related, putative chr6 17792302 17793119 - CDS,downstream 9 LOC_Os10g23050 helix-loop-helix DNA-binding protein, putative, expressed gene helix-loop-helix DNA-binding protein, putative, expressed chr10 11944688 11946560 + CDS,three_prime_UTR 9 LOC_Os02g12180 hypothetical protein gene hypothetical protein chr2 6328023 6328687 - CDS,promoter 9 LOC_Os06g42990 AP2 domain containing protein gene AP2 domain containing protein chr6 25825906 25827084 + CDS,promoter 9 LOC_Os02g01060 harpin-induced protein 1 domain containing protein, expressed gene harpin-induced protein 1 domain containing protein, expressed chr2 33029 33967 + three_prime_UTR,promoter,downstream 9 LOC_Os05g27550 OsFBX166 - F-box domain containing protein gene OsFBX166 - F-box domain containing protein chr5 15970851 15971989 + CDS,promoter,downstream 9 LOC_Os01g44069 glycerol-3-phosphate acyltransferase, putative, expressed gene glycerol-3-phosphate acyltransferase, putative, expressed chr1 25255957 25262937 + five_prime_UTR,promoter,downstream 9 LOC_Os07g01400 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 251818 252867 + CDS,promoter,downstream 9 LOC_Os01g66590 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr1 38675174 38678664 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g08250 expressed protein gene expressed protein chr4 4396879 4398484 - CDS,three_prime_UTR,downstream 9 LOC_Os01g03340 BBTI4 - Bowman-Birk type bran trypsin inhibitor precursor, expressed gene BBTI4 - Bowman-Birk type bran trypsin inhibitor precursor, expressed chr1 1346567 1347786 - three_prime_UTR,downstream 9 LOC_Os09g29670 white-brown complex homolog protein 11, putative, expressed gene white-brown complex homolog protein 11, putative, expressed chr9 18043670 18049945 + CDS 9 LOC_Os06g43490 cytochrome P450, putative gene cytochrome P450, putative chr6 26144809 26147455 + CDS 9 LOC_Os10g30140 laccase-16, putative gene laccase-16, putative chr10 15588248 15590099 + CDS,promoter 9 LOC_Os06g10850 lipase, putative, expressed gene lipase, putative, expressed chr6 5656851 5660266 + CDS,five_prime_UTR,promoter 9 LOC_Os11g43360 tropinone reductase 2, putative gene tropinone reductase 2, putative chr11 25697383 25698674 - CDS,promoter,downstream 9 LOC_Os09g17560 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr9 10739339 10740910 - CDS,three_prime_UTR,downstream 9 LOC_Os11g47944 thaumatin, putative gene thaumatin, putative chr11 28395695 28396539 - CDS,promoter,downstream 9 LOC_Os05g39980 expressed protein gene expressed protein chr5 23425277 23429014 - CDS,three_prime_UTR 9 LOC_Os12g10950 hypothetical protein gene hypothetical protein chr12 5914418 5914639 - CDS,promoter,downstream 9 LOC_Os09g36940 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr9 21312642 21313432 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g33070 myb-like DNA-binding domain containing protein, putative, expressed gene myb-like DNA-binding domain containing protein, putative, expressed chr12 19962868 19965843 - CDS,promoter,downstream 9 LOC_Os11g02130 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr11 582138 584662 + five_prime_UTR,promoter 9 LOC_Os06g24190 expressed protein gene expressed protein chr6 14169131 14169919 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g05470 protein kinase, putative gene protein kinase, putative chr4 2748316 2754485 - CDS,downstream 9 LOC_Os01g72850 GDSL-motif lipase/hydrolase family protein, putative gene GDSL-motif lipase/hydrolase family protein, putative chr1 42254611 42256146 - CDS,promoter 9 LOC_Os07g46190 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr7 27568375 27570500 + CDS 9 LOC_Os01g10504 OsMADS3 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS3 - MADS-box family gene with MIKCc type-box, expressed chr1 5558548 5567844 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g41000 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr3 22785372 22792432 - CDS,promoter,downstream 9 LOC_Os01g54210 GATA zinc finger domain containing protein, expressed gene GATA zinc finger domain containing protein, expressed chr1 31179152 31181412 - five_prime_UTR,promoter,downstream 9 LOC_Os03g57730 uclacyanin-2 precursor, putative gene uclacyanin-2 precursor, putative chr3 32895765 32896270 + CDS,downstream 9 LOC_Os08g17970 hypothetical protein gene hypothetical protein chr8 11020500 11020778 + CDS,promoter,downstream 9 LOC_Os02g48320 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr2 29565870 29568389 - three_prime_UTR,five_prime_UTR,promoter,downstream 9 LOC_Os09g10840 transcription factor, putative, expressed gene transcription factor, putative, expressed chr9 5917077 5928775 + five_prime_UTR,CDS,promoter 9 LOC_Os11g31070 hypothetical protein gene hypothetical protein chr11 17610055 17610799 - CDS,promoter,downstream 9 LOC_Os06g49830 SHI, putative, expressed gene SHI, putative, expressed chr6 30160501 30161655 + CDS,promoter,downstream 9 LOC_Os11g03940 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 1571289 1583920 - CDS,downstream 9 LOC_Os01g04290 glycosyl hydrolase family 10 protein, putative gene glycosyl hydrolase family 10 protein, putative chr1 1905978 1908667 - CDS,promoter 9 LOC_Os05g13340 conserved hypothetical protein gene conserved hypothetical protein chr5 7406291 7406795 - CDS,downstream 9 LOC_Os05g11490 hypothetical protein gene hypothetical protein chr5 6507197 6507711 + CDS,promoter,downstream 9 LOC_Os11g36230 expressed protein gene expressed protein chr11 20857893 20858854 - CDS,three_prime_UTR,promoter 9 LOC_Os05g44140 non-symbiotic hemoglobin 2, putative gene non-symbiotic hemoglobin 2, putative chr5 25596338 25597465 - CDS,downstream 9 LOC_Os04g30280 OsWAK48 - OsWAK receptor-like protein OsWAK-RLP gene OsWAK48 - OsWAK receptor-like protein OsWAK-RLP chr4 17906165 17912097 - CDS 9 LOC_Os04g05410 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 2704323 2707830 - CDS,promoter 9 LOC_Os12g28710 ATPase 3, putative, expressed gene ATPase 3, putative, expressed chr12 16958000 16959602 + CDS 9 LOC_Os03g30870 progesterone 5-beta-reductase, putative gene progesterone 5-beta-reductase, putative chr3 17586985 17587991 + CDS,promoter,downstream 9 LOC_Os07g07530 expressed protein gene expressed protein chr7 3753393 3756858 + five_prime_UTR,promoter 9 LOC_Os01g45430 hypothetical protein gene hypothetical protein chr1 25772909 25775135 + CDS,promoter 9 LOC_Os11g26790 dehydrin, putative, expressed gene dehydrin, putative, expressed chr11 14878878 14880171 - three_prime_UTR 9 LOC_Os07g02520 conserved hypothetical protein gene conserved hypothetical protein chr7 894314 896677 + CDS,promoter,downstream 9 LOC_Os02g04760 cycloartenol synthase, putative gene cycloartenol synthase, putative chr2 2174423 2178634 - CDS 9 LOC_Os04g35660 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr4 21561673 21562759 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g15550 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 9012572 9013924 + CDS,promoter 9 LOC_Os06g18920 hypothetical protein gene hypothetical protein chr6 10747593 10748711 + CDS,downstream 9 LOC_Os01g24790 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr1 13956486 13958219 + five_prime_UTR,CDS,promoter 9 LOC_Os06g43304 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 26021270 26028286 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g21130 expressed protein gene expressed protein chr10 10677714 10680806 - CDS 9 LOC_Os11g42960 integral membrane protein TIGR01569 containing protein, expressed gene integral membrane protein TIGR01569 containing protein, expressed chr11 25427638 25428951 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g05780 POT domain containing peptide transporter, putative, expressed gene POT domain containing peptide transporter, putative, expressed chr10 2911731 2913690 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os11g04360 alpha/beta hydrolase fold, putative, expressed gene alpha/beta hydrolase fold, putative, expressed chr11 1810714 1812624 + five_prime_UTR,CDS,promoter 9 LOC_Os01g35950 hypothetical protein gene hypothetical protein chr1 19892595 19893702 + CDS,promoter 9 LOC_Os11g25060 flavonol synthase/flavanone 3-hydroxylase, putative gene flavonol synthase/flavanone 3-hydroxylase, putative chr11 13821458 13827174 + CDS,promoter 9 LOC_Os01g18150 STE_MEK_ste7_MAP2K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast gene STE_MEK_ste7_MAP2K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast chr1 10163378 10164481 + CDS,promoter,downstream 9 LOC_Os03g25330 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 14468380 14469944 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os07g43570 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed chr7 26058326 26062210 - CDS 9 LOC_Os07g03319 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1334345 1335057 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g10120 lipoxygenase, putative, expressed gene lipoxygenase, putative, expressed chr2 5276617 5282623 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g28550 ATPase, AAA family domain containing protein, expressed gene ATPase, AAA family domain containing protein, expressed chr12 16866551 16868534 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os04g56280 hypothetical protein gene hypothetical protein chr4 33366598 33367754 + CDS,promoter 9 LOC_Os09g18230 expressed protein gene expressed protein chr9 11170638 11183419 - CDS 9 LOC_Os07g41150 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed gene glycerophosphoryl diester phosphodiesterase family protein, putative, expressed chr7 24627268 24628738 - CDS,promoter 9 LOC_Os08g32340 expressed protein gene expressed protein chr8 20023407 20024184 + CDS,promoter,downstream 9 LOC_Os05g06790 hypothetical protein gene hypothetical protein chr5 3546332 3549923 + CDS 9 LOC_Os11g32620 chalcone synthase, putative gene chalcone synthase, putative chr11 18776940 18778528 - CDS,downstream 9 LOC_Os02g36414 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr2 21989507 21996866 + CDS,three_prime_UTR 9 LOC_Os04g56560 proton-dependent oligopeptide transport, putative, expressed gene proton-dependent oligopeptide transport, putative, expressed chr4 33544692 33547387 + CDS,three_prime_UTR,downstream 9 LOC_Os04g50020 heavy-metal-associated domain-containing protein, putative, expressed gene heavy-metal-associated domain-containing protein, putative, expressed chr4 29642734 29643790 + CDS,promoter,downstream 9 LOC_Os06g16200 proteins of unknown function domain containing protein, expressed gene proteins of unknown function domain containing protein, expressed chr6 9220327 9222651 + CDS,three_prime_UTR,downstream 9 LOC_Os08g31660 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr8 19607731 19609470 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g30030 cysteine-rich receptor-like protein kinase 12 precursor, putative gene cysteine-rich receptor-like protein kinase 12 precursor, putative chr4 17741478 17744819 - CDS,promoter 9 LOC_Os12g41060 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr12 25380937 25385134 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g29150 expressed protein gene expressed protein chr11 16432351 16434154 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g72810 secreted glycoprotein, putative, expressed gene secreted glycoprotein, putative, expressed chr1 42237767 42239523 + five_prime_UTR,promoter 9 LOC_Os04g55800 sulfate transporter, putative, expressed gene sulfate transporter, putative, expressed chr4 33029921 33035542 - CDS 9 LOC_Os05g47590 conserved hypothetical protein gene conserved hypothetical protein chr5 27201825 27203238 + CDS,promoter,downstream 9 LOC_Os03g46060 thaumatin family domain containing protein, expressed gene thaumatin family domain containing protein, expressed chr3 26030959 26031821 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g47570 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28224855 28226041 + CDS,three_prime_UTR,promoter 9 LOC_Os11g19149 expressed protein gene expressed protein chr11 10919592 10920918 + three_prime_UTR,downstream 9 LOC_Os01g13380 hypothetical protein gene hypothetical protein chr1 7454656 7455090 - CDS,promoter 9 LOC_Os01g54515 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr1 31355138 31357904 + CDS,three_prime_UTR,downstream 9 LOC_Os01g23070 hypothetical protein gene hypothetical protein chr1 12979559 12981755 + CDS,promoter 9 LOC_Os12g02080 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr12 622549 625113 + five_prime_UTR,CDS,promoter 9 LOC_Os01g07850 glyoxalase family protein, putative, expressed gene glyoxalase family protein, putative, expressed chr1 3778634 3781004 + CDS,three_prime_UTR,downstream 9 LOC_Os09g07700 conserved hypothetical protein gene conserved hypothetical protein chr9 3886046 3889411 - CDS,downstream 9 LOC_Os07g47230 TKL_IRAK_DUF26-lh.10 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-lh.10 - DUF26 kinases have homology to DUF26 containing loci, expressed chr7 28227577 28230832 + CDS,promoter 9 LOC_Os08g04310 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr8 2114686 2116177 + five_prime_UTR,CDS,promoter 9 LOC_Os03g24210 hypothetical protein gene hypothetical protein chr3 13765081 13767512 + CDS 9 LOC_Os11g10800 dirigent, putative, expressed gene dirigent, putative, expressed chr11 5943115 5943996 + five_prime_UTR,CDS,promoter 9 LOC_Os12g36240 inhibitor I family protein, putative gene inhibitor I family protein, putative chr12 22169386 22169987 - CDS,downstream 9 LOC_Os10g39550 MYB family transcription factor, putative gene MYB family transcription factor, putative chr10 21062236 21066744 - CDS,downstream 9 LOC_Os02g57770 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr2 35370693 35372958 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g41300 OsFBX462 - F-box domain containing protein gene OsFBX462 - F-box domain containing protein chr12 25578869 25580708 - CDS,downstream 9 LOC_Os04g53710 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr4 31823342 31824158 + five_prime_UTR,promoter 9 LOC_Os01g72290 expressed protein gene expressed protein chr1 41913641 41914893 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os09g16200 conserved hypothetical protein gene conserved hypothetical protein chr9 9880133 9887172 + CDS,promoter 9 LOC_Os05g12090 VQ domain containing protein, putative gene VQ domain containing protein, putative chr5 6919710 6919994 - CDS,promoter,downstream 9 LOC_Os11g32050 expressed protein gene expressed protein chr11 18419678 18421635 - CDS,downstream 9 LOC_Os01g04750 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr1 2153326 2154994 + three_prime_UTR,downstream 9 LOC_Os06g48065 Zinc finger, C3HC4 type domain containing protein, expressed gene Zinc finger, C3HC4 type domain containing protein, expressed chr6 29077355 29079309 - three_prime_UTR,promoter 9 LOC_Os08g09420 OsFBX266 - F-box domain containing protein, expressed gene OsFBX266 - F-box domain containing protein, expressed chr8 5456350 5459489 + three_prime_UTR,downstream 9 LOC_Os05g15920 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr5 8981716 8982884 + five_prime_UTR,CDS,promoter 9 LOC_Os07g09560 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr7 5061123 5062118 + CDS,downstream 9 LOC_Os02g43410 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr2 26194144 26198851 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os01g22336 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 12550307 12555987 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os07g19000 LTPL41 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL41 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 11251042 11251661 + three_prime_UTR 9 LOC_Os05g35820 conserved hypothetical protein gene conserved hypothetical protein chr5 21188249 21189351 + CDS,promoter 9 LOC_Os05g47770 serine/threonine-protein kinase At1g18390 precursor, putative, expressed gene serine/threonine-protein kinase At1g18390 precursor, putative, expressed chr5 27298262 27304901 + five_prime_UTR,CDS,promoter 9 LOC_Os02g29130 ankyrin, putative, expressed gene ankyrin, putative, expressed chr2 17239151 17249009 - CDS,three_prime_UTR,promoter 9 LOC_Os05g11470 hypothetical protein gene hypothetical protein chr5 6489832 6490926 + CDS,promoter 9 LOC_Os12g27940 expressed protein gene expressed protein chr12 16466412 16467226 + CDS 9 LOC_Os07g34910 aspartic proteinase nepenthesin precursor, putative gene aspartic proteinase nepenthesin precursor, putative chr7 20924910 20925449 + CDS,promoter,downstream 9 LOC_Os02g51110 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr2 31260376 31264091 + CDS,three_prime_UTR,downstream 9 LOC_Os11g03270 nucleoside-triphosphatase, putative gene nucleoside-triphosphatase, putative chr11 1201741 1207799 + CDS,promoter 9 LOC_Os11g48000 ZOS11-11 - C2H2 zinc finger protein, expressed gene ZOS11-11 - C2H2 zinc finger protein, expressed chr11 28424078 28425724 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os05g33140 CHIT5 - Chitinase family protein precursor, expressed gene CHIT5 - Chitinase family protein precursor, expressed chr5 19372842 19374218 + CDS,three_prime_UTR,promoter 9 LOC_Os05g09740 HAD superfamily phosphatase, putative, expressed gene HAD superfamily phosphatase, putative, expressed chr5 5534466 5536048 - CDS,three_prime_UTR,downstream 9 LOC_Os02g30380 expressed protein gene expressed protein chr2 18086033 18087151 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g37990 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr4 22426725 22434898 + three_prime_UTR,downstream 9 LOC_Os12g39800 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 24545397 24557553 - CDS 9 LOC_Os05g33960 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr5 19982670 19988278 - CDS,three_prime_UTR,downstream 9 LOC_Os01g18910 peroxidase precursor, putative gene peroxidase precursor, putative chr1 10690374 10691470 - CDS,downstream 9 LOC_Os11g47580 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28230636 28231893 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g01290 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr3 201527 204750 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g06620 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr7 3220593 3228298 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os07g05150 Skp1 family, dimerisation domain containing protein gene Skp1 family, dimerisation domain containing protein chr7 2284849 2285322 - CDS,promoter,downstream 9 LOC_Os01g58070 polyphenol oxidase, putative gene polyphenol oxidase, putative chr1 33589592 33590617 - CDS,downstream 9 LOC_Os03g27370 phospholipase D, putative, expressed gene phospholipase D, putative, expressed chr3 15672367 15677861 + CDS 9 LOC_Os01g71350 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41348688 41350105 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g35320 expressed protein gene expressed protein chr2 21237383 21240893 + CDS,promoter 9 LOC_Os11g07320 hypothetical protein gene hypothetical protein chr11 3681740 3683554 - CDS,promoter,downstream 9 LOC_Os01g15039 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr1 8446460 8450535 - CDS 9 LOC_Os11g10870 dirigent, putative, expressed gene dirigent, putative, expressed chr11 5992260 5993293 + CDS,three_prime_UTR 9 LOC_Os09g17660 expressed protein gene expressed protein chr9 10800053 10801379 + five_prime_UTR,CDS,promoter 9 LOC_Os07g04610 hypothetical protein gene hypothetical protein chr7 2049098 2049858 - CDS,downstream 9 LOC_Os08g13090 BTB/POZ domain containing protein gene BTB/POZ domain containing protein chr8 7776854 7777893 - CDS,promoter 9 LOC_Os03g16960 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr3 9424426 9425779 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g01560 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr7 347475 352686 - CDS 9 LOC_Os08g26220 expressed protein gene expressed protein chr8 15970079 15974762 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os08g15550 DEFL56 - Defensin and Defensin-like DEFL family gene DEFL56 - Defensin and Defensin-like DEFL family chr8 9457773 9458486 - CDS,downstream 9 LOC_Os01g74160 carboxyl-terminal peptidase, putative, expressed gene carboxyl-terminal peptidase, putative, expressed chr1 42959062 42963946 + five_prime_UTR,CDS,promoter 9 LOC_Os03g47940 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr3 27244991 27249622 + CDS 9 LOC_Os10g30440 hypothetical protein gene hypothetical protein chr10 15752398 15752778 - CDS,promoter,downstream 9 LOC_Os01g16770 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr1 9525163 9525960 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os12g02450 OsWRKY64 - Superfamily of TFs having WRKY and zinc finger domains gene OsWRKY64 - Superfamily of TFs having WRKY and zinc finger domains chr12 823302 824793 - five_prime_UTR,downstream 9 LOC_Os08g41190 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 26017550 26018635 - CDS,downstream 9 LOC_Os07g38130 polygalacturonase inhibitor 1 precursor, putative, expressed gene polygalacturonase inhibitor 1 precursor, putative, expressed chr7 22873259 22874714 - five_prime_UTR,CDS,downstream 9 LOC_Os09g21100 mov34/MPN/PAD-1 family protein gene mov34/MPN/PAD-1 family protein chr9 12720513 12725246 + CDS,promoter 9 LOC_Os07g05360 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed gene photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed chr7 2452961 2455612 + five_prime_UTR 9 LOC_Os01g26310 wall-associated kinase-like 2, putative, expressed gene wall-associated kinase-like 2, putative, expressed chr1 14913793 14914722 - CDS,downstream 9 LOC_Os06g35940 osFTL12 FT-Like12 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL12 FT-Like12 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr6 20970629 20973236 - five_prime_UTR,CDS 9 LOC_Os02g58660 ATCHX15, putative, expressed gene ATCHX15, putative, expressed chr2 35841745 35844754 + five_prime_UTR,three_prime_UTR,CDS,promoter 9 LOC_Os04g58520 hypothetical protein gene hypothetical protein chr4 34619174 34619767 + CDS,promoter 9 LOC_Os01g18950 peroxidase precursor, putative gene peroxidase precursor, putative chr1 10712115 10713247 - CDS,downstream 9 LOC_Os10g09920 LTPL132 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL132 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr10 5385768 5386212 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g44560 AMP-binding domain containing protein gene AMP-binding domain containing protein chr7 26604746 26610329 - CDS 9 LOC_Os08g42080 ACR5, putative, expressed gene ACR5, putative, expressed chr8 26569448 26572232 + three_prime_UTR 9 LOC_Os10g18400 beta-galactosidase precursor, putative, expressed gene beta-galactosidase precursor, putative, expressed chr10 9277872 9285255 + five_prime_UTR,CDS,promoter 9 LOC_Os05g06380 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr5 3269144 3270590 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g39030 peptide transporter PTR2, putative gene peptide transporter PTR2, putative chr4 22993517 22997712 - CDS,downstream 9 LOC_Os03g04190 cytochrome P450, putative gene cytochrome P450, putative chr3 1919039 1920892 - CDS 9 LOC_Os05g06140 lipase, putative, expressed gene lipase, putative, expressed chr5 3069619 3074368 - CDS,three_prime_UTR,downstream 9 LOC_Os06g06890 expressed protein gene expressed protein chr6 3268778 3270435 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os01g49360 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr1 28375354 28378642 - CDS 9 LOC_Os03g13180 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 7106127 7107670 + five_prime_UTR,promoter 9 LOC_Os06g35700 reticuline oxidase-like protein precursor, putative, expressed gene reticuline oxidase-like protein precursor, putative, expressed chr6 20831435 20833497 - five_prime_UTR,CDS,downstream 9 LOC_Os06g34020 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr6 19813081 19817428 + CDS,promoter 9 LOC_Os11g09190 conserved hypothetical protein gene conserved hypothetical protein chr11 4927791 4929665 + CDS,promoter 9 LOC_Os12g02330 LTPL13 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL13 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr12 745155 746300 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g01890 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 488913 490612 + CDS,three_prime_UTR 9 LOC_Os06g37390 hypothetical protein gene hypothetical protein chr6 22097433 22097888 - CDS,downstream 9 LOC_Os01g20780 anther-specific protein SF18 precursor, putative, expressed gene anther-specific protein SF18 precursor, putative, expressed chr1 11584581 11585499 + five_prime_UTR,promoter,downstream 9 LOC_Os08g09390 OsFBX264 - F-box domain containing protein gene OsFBX264 - F-box domain containing protein chr8 5445752 5447612 - CDS 9 LOC_Os10g04400 transferase family protein, putative gene transferase family protein, putative chr10 2076859 2080057 + CDS,downstream 9 LOC_Os06g05550 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr6 2514761 2516941 + CDS 9 LOC_Os10g06930 mitogen-activated protein kinase 15, putative gene mitogen-activated protein kinase 15, putative chr10 3611238 3612236 + CDS,promoter,downstream 9 LOC_Os08g28710 receptor protein kinase CRINKLY4 precursor, putative, expressed gene receptor protein kinase CRINKLY4 precursor, putative, expressed chr8 17555348 17557478 - CDS,three_prime_UTR,downstream 9 LOC_Os01g72280 tetratricopeptide repeat containing protein, putative, expressed gene tetratricopeptide repeat containing protein, putative, expressed chr1 41903167 41906410 - CDS 9 LOC_Os02g36670 hypothetical protein gene hypothetical protein chr2 22129647 22131075 - CDS,promoter,downstream 9 LOC_Os06g12330 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr6 6681412 6684948 - CDS 9 LOC_Os03g48780 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr3 27784031 27785101 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g02290 LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL23 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr12 722133 723301 + three_prime_UTR,downstream 9 LOC_Os06g13830 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr6 7670256 7673779 - five_prime_UTR,CDS 9 LOC_Os10g05520 OsFBX371 - F-box domain containing protein, expressed gene OsFBX371 - F-box domain containing protein, expressed chr10 2730711 2733286 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g13830 osFTL13 FT-Like13 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein gene osFTL13 FT-Like13 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein chr2 7485426 7487001 + CDS,promoter 9 LOC_Os08g13020 BTB and MATH domain containing protein, putative gene BTB and MATH domain containing protein, putative chr8 7734497 7736101 + CDS,downstream 9 LOC_Os07g34690 expressed protein gene expressed protein chr7 20788778 20789714 - CDS,three_prime_UTR,downstream 9 LOC_Os01g27120 expressed protein gene expressed protein chr1 15117667 15118730 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g10110 cytokinin dehydrogenase precursor, putative, expressed gene cytokinin dehydrogenase precursor, putative, expressed chr1 5269103 5274678 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g47110 OsWAK121 - OsWAK receptor-like protein kinase gene OsWAK121 - OsWAK receptor-like protein kinase chr11 27798505 27804757 + CDS,promoter 9 LOC_Os01g15060 conserved hypothetical protein gene conserved hypothetical protein chr1 8454342 8455022 + CDS,promoter 9 LOC_Os07g17460 OsFBL36 - F-box domain and LRR containing protein, expressed gene OsFBL36 - F-box domain and LRR containing protein, expressed chr7 10304768 10307378 - CDS,promoter 9 LOC_Os04g59120 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr4 34982581 34985882 + CDS,three_prime_UTR,promoter 9 LOC_Os11g45970 NBS-LRR disease resistance protein, putative, expressed gene NBS-LRR disease resistance protein, putative, expressed chr11 27340637 27346817 - CDS,downstream 9 LOC_Os12g30950 F-box protein interaction domain containing protein gene F-box protein interaction domain containing protein chr12 18557800 18559390 - CDS,promoter,downstream 9 LOC_Os01g57580 bHelix-loop-helix transcription factor, putative, expressed gene bHelix-loop-helix transcription factor, putative, expressed chr1 33271351 33273264 - CDS,promoter,downstream 9 LOC_Os02g39170 GDSL-like lipase/acylhydrolase, putative gene GDSL-like lipase/acylhydrolase, putative chr2 23656750 23658590 - CDS,downstream 9 LOC_Os06g32960 peroxidase precursor, putative gene peroxidase precursor, putative chr6 19193461 19194512 + CDS,promoter,downstream 9 LOC_Os04g35930 OsFBX134 - F-box domain containing protein gene OsFBX134 - F-box domain containing protein chr4 21733995 21736922 - CDS 9 LOC_Os01g14230 hypothetical protein gene hypothetical protein chr1 7979642 7980577 + CDS,promoter,downstream 9 LOC_Os12g01020 conserved hypothetical protein gene conserved hypothetical protein chr12 4477 7440 - CDS,downstream 9 LOC_Os06g32990 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 19204571 19206122 - CDS 9 LOC_Os07g34900 aspartic proteinase nepenthesin precursor, putative, expressed gene aspartic proteinase nepenthesin precursor, putative, expressed chr7 20918372 20919739 - CDS,promoter 9 LOC_Os02g53180 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed gene 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed chr2 32552766 32556836 + CDS,three_prime_UTR 9 LOC_Os02g03980 OsFBX36 - F-box domain containing protein gene OsFBX36 - F-box domain containing protein chr2 1719673 1720857 - CDS,promoter,downstream 9 LOC_Os01g41380 unknown gene unknown chr1 23414438 23417178 - CDS,downstream 9 LOC_Os05g16240 expressed protein gene expressed protein chr5 9183884 9185137 - CDS,promoter 9 LOC_Os09g28400 alpha-amylase precursor, putative, expressed gene alpha-amylase precursor, putative, expressed chr9 17287992 17290294 + five_prime_UTR,CDS,promoter 9 LOC_Os05g05120 hypothetical protein gene hypothetical protein chr5 2491831 2492088 - CDS,downstream 9 LOC_Os08g17830 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr8 10937449 10944138 + CDS,downstream 9 LOC_Os01g59640 no apical meristem protein, putative gene no apical meristem protein, putative chr1 34489762 34491653 - CDS,downstream 9 LOC_Os02g50690 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr2 30959713 30961730 - five_prime_UTR,CDS,downstream 9 LOC_Os05g06060 E3 ubiquitin-protein ligase SINA-like 2, putative gene E3 ubiquitin-protein ligase SINA-like 2, putative chr5 3036073 3037203 + CDS,downstream 9 LOC_Os04g03360 jacalin-like lectin domain containing protein gene jacalin-like lectin domain containing protein chr4 1439643 1440483 + CDS,promoter 9 LOC_Os02g01220 rhodanese-like domain containing protein, putative, expressed gene rhodanese-like domain containing protein, putative, expressed chr2 124645 127637 + five_prime_UTR,CDS,promoter 9 LOC_Os01g21760 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 12208559 12209787 + CDS,promoter 9 LOC_Os10g40802 unknown gene unknown chr10 21859731 21860853 - CDS,promoter,downstream 9 LOC_Os03g26060 hypothetical protein gene hypothetical protein chr3 14932521 14934405 + CDS,downstream 9 LOC_Os02g11010 hypothetical protein gene hypothetical protein chr2 5851856 5855893 - CDS,downstream 9 LOC_Os06g41100 transcription factor, putative, expressed gene transcription factor, putative, expressed chr6 24560308 24567617 - CDS 9 LOC_Os04g39770 expressed protein gene expressed protein chr4 23512227 23512752 - CDS,promoter,downstream 9 LOC_Os09g26200 ZOS9-11 - C2H2 zinc finger protein, expressed gene ZOS9-11 - C2H2 zinc finger protein, expressed chr9 15808931 15809851 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os01g40400 histone deacetylase 19, putative gene histone deacetylase 19, putative chr1 22807654 22809642 - CDS,promoter,downstream 9 LOC_Os11g36719 lipoxygenase, putative, expressed gene lipoxygenase, putative, expressed chr11 21208904 21218651 + five_prime_UTR,CDS,promoter 9 LOC_Os08g39840 lipoxygenase, chloroplast precursor, putative, expressed gene lipoxygenase, chloroplast precursor, putative, expressed chr8 25213649 25221366 - CDS,downstream 9 LOC_Os01g68290 expressed protein gene expressed protein chr1 39678481 39679104 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g32080 LEML2 - Anther-specific LEM1 family protein precursor, expressed gene LEML2 - Anther-specific LEM1 family protein precursor, expressed chr2 18950650 18951484 + CDS,three_prime_UTR,promoter 9 LOC_Os04g56950 jasmonate O-methyltransferase, putative, expressed gene jasmonate O-methyltransferase, putative, expressed chr4 33765117 33767459 - five_prime_UTR,CDS,downstream 9 LOC_Os05g26070 cyclin, putative, expressed gene cyclin, putative, expressed chr5 15106854 15109009 - three_prime_UTR,downstream 9 LOC_Os11g07330 hypothetical protein gene hypothetical protein chr11 3685238 3686956 - CDS,promoter 9 LOC_Os01g21135 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 11792568 11794336 - CDS,three_prime_UTR,downstream 9 LOC_Os04g10890 conserved hypothetical protein gene conserved hypothetical protein chr4 5900227 5902200 + CDS,promoter 9 LOC_Os02g08110 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr2 4286996 4288838 - five_prime_UTR,downstream 9 LOC_Os07g05710 hypothetical protein gene hypothetical protein chr7 2727248 2729062 - CDS,promoter,downstream 9 LOC_Os02g40610 hypothetical protein gene hypothetical protein chr2 24623026 24625441 - CDS,promoter 9 LOC_Os02g51510 hypothetical protein gene hypothetical protein chr2 31538227 31538910 + CDS,downstream 9 LOC_Os03g24610 endonuclease/exonuclease/phosphatase family domain containing protein, expressed gene endonuclease/exonuclease/phosphatase family domain containing protein, expressed chr3 14013978 14017360 + CDS,downstream 9 LOC_Os09g08920 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 4736231 4736840 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os10g32270 expressed protein gene expressed protein chr10 16867143 16872187 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g22220 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr4 12579280 12579999 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g49170 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr4 29138856 29139412 - five_prime_UTR,promoter,downstream 9 LOC_Os02g54880 cytochrome c oxidase subunit, putative gene cytochrome c oxidase subunit, putative chr2 33602165 33604549 - CDS,promoter 9 LOC_Os01g71650 glycosyl hydrolases family 17, putative gene glycosyl hydrolases family 17, putative chr1 41524680 41525372 + CDS,promoter 9 LOC_Os10g03430 hypothetical protein gene hypothetical protein chr10 1463671 1464916 + CDS 9 LOC_Os03g50620 ATP binding protein, putative, expressed gene ATP binding protein, putative, expressed chr3 28894097 28899981 + three_prime_UTR,promoter,downstream 9 LOC_Os11g04000 hypothetical protein gene hypothetical protein chr11 1614764 1615953 + CDS,downstream 9 LOC_Os08g11760 expressed protein gene expressed protein chr8 6890104 6892676 + five_prime_UTR,CDS 9 LOC_Os04g02570 hypothetical protein gene hypothetical protein chr4 962695 963108 - CDS,promoter,downstream 9 LOC_Os04g48500 hypothetical protein gene hypothetical protein chr4 28732692 28736261 + CDS,downstream 9 LOC_Os11g47530 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28209896 28211059 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g25420 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr10 13071169 13073401 + CDS,three_prime_UTR 9 LOC_Os06g28720 expressed protein gene expressed protein chr6 16351390 16352259 + CDS,promoter 9 LOC_Os01g34860 expressed protein gene expressed protein chr1 19244108 19247156 - five_prime_UTR,CDS,downstream 9 LOC_Os03g49270 THION36 - Plant thionin family protein precursor, expressed gene THION36 - Plant thionin family protein precursor, expressed chr3 28047619 28048256 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g10210 HAD superfamily phosphatase, putative, expressed gene HAD superfamily phosphatase, putative, expressed chr5 5553566 5554872 - CDS,downstream 9 LOC_Os11g31710 hypothetical protein gene hypothetical protein chr11 18110777 18112334 - CDS,promoter 9 LOC_Os04g51510 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr4 30333805 30334989 + CDS,promoter,downstream 9 LOC_Os11g04350 cell death associated protein, putative, expressed gene cell death associated protein, putative, expressed chr11 1807130 1808538 + CDS,three_prime_UTR,downstream 9 LOC_Os06g13350 SAM dependent carboxyl methyltransferase, putative, expressed gene SAM dependent carboxyl methyltransferase, putative, expressed chr6 7340810 7343914 - CDS,promoter 9 LOC_Os06g43420 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 26096157 26097854 - CDS,downstream 9 LOC_Os04g56180 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 33314833 33321001 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g04919 unknown gene unknown chr7 2174191 2175303 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g07440 hypothetical protein gene hypothetical protein chr12 3667705 3669772 + CDS 9 LOC_Os04g06710 hypothetical protein gene hypothetical protein chr4 3533160 3533495 + CDS,promoter 9 LOC_Os08g04240 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr8 2062159 2063912 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g64340 heavy metal-associated domain containing protein, expressed gene heavy metal-associated domain containing protein, expressed chr3 36359238 36360640 - CDS,promoter,downstream 9 LOC_Os01g55940 OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed gene OsGH3.2 - Probable indole-3-acetic acid-amido synthetase, expressed chr1 32220332 32224079 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os04g14370 hypothetical protein gene hypothetical protein chr4 8038417 8042046 + CDS,promoter 9 LOC_Os04g52140 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr4 30788992 30794729 + CDS 9 LOC_Os05g32880 response regulator receiver domain containing protein, expressed gene response regulator receiver domain containing protein, expressed chr5 19192975 19197503 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g05370 conserved hypothetical protein gene conserved hypothetical protein chr8 2832171 2834218 - CDS 9 LOC_Os05g40070 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr5 23473534 23476434 - CDS,downstream 9 LOC_Os06g30480 expressed protein gene expressed protein chr6 17616360 17617969 - five_prime_UTR,CDS,downstream 9 LOC_Os04g58190 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr4 34469181 34471812 - five_prime_UTR,downstream 9 LOC_Os04g53800 leucoanthocyanidin reductase, putative, expressed gene leucoanthocyanidin reductase, putative, expressed chr4 31874413 31877283 + CDS 9 LOC_Os03g51450 hypothetical protein gene hypothetical protein chr3 29425659 29426018 + CDS,promoter,downstream 9 LOC_Os03g37490 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 20791563 20798315 - CDS 9 LOC_Os03g44320 hypothetical protein gene hypothetical protein chr3 24909861 24911453 + CDS,downstream 9 LOC_Os01g61010 nodulin, putative, expressed gene nodulin, putative, expressed chr1 35301449 35304696 - three_prime_UTR,promoter 9 LOC_Os10g02840 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr10 1138885 1140409 - CDS,three_prime_UTR,promoter 9 LOC_Os04g24319 jasmonate-induced protein, putative, expressed gene jasmonate-induced protein, putative, expressed chr4 13927280 13928238 - five_prime_UTR,CDS,downstream 9 LOC_Os03g56050 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed gene AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed chr3 31914810 31918390 + CDS,promoter,downstream 9 LOC_Os07g11410 RAL5 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed gene RAL5 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed chr7 6275078 6275822 - five_prime_UTR,downstream 9 LOC_Os01g06310 glycine-rich cell wall structural protein precursor, putative, expressed gene glycine-rich cell wall structural protein precursor, putative, expressed chr1 2998576 3000204 + CDS 9 LOC_Os02g37550 conserved hypothetical protein gene conserved hypothetical protein chr2 22649641 22650257 + CDS,promoter 9 LOC_Os04g42050 hypothetical protein gene hypothetical protein chr4 24720046 24720547 + CDS,promoter,downstream 9 LOC_Os09g17000 glycerophosphoryl diester phosphodiesterase family protein, putative gene glycerophosphoryl diester phosphodiesterase family protein, putative chr9 10402687 10404802 - CDS,three_prime_UTR 9 LOC_Os08g24510 hypothetical protein gene hypothetical protein chr8 14800488 14800703 + CDS,downstream 9 LOC_Os04g47990 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr4 28349152 28352406 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os05g51270 hypothetical protein gene hypothetical protein chr5 29349238 29350511 + CDS,downstream 9 LOC_Os08g02200 expressed protein gene expressed protein chr8 745499 746146 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g14304 OsWAK30/31 - OsWAK receptor-like protein OsWAK-RLP, expressed gene OsWAK30/31 - OsWAK receptor-like protein OsWAK-RLP, expressed chr4 8004292 8013812 + five_prime_UTR,promoter 9 LOC_Os07g05300 conserved hypothetical protein gene conserved hypothetical protein chr7 2409972 2411344 - CDS,downstream 9 LOC_Os12g17860 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 10233453 10240131 - CDS,downstream 9 LOC_Os03g01270 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 188333 190297 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g41850 SMP-30/Gluconolaconase/LRE-like region containing protein gene SMP-30/Gluconolaconase/LRE-like region containing protein chr6 25092245 25093297 + CDS,downstream 9 LOC_Os12g22930 hypothetical protein gene hypothetical protein chr12 12959995 12960557 + CDS,promoter 9 LOC_Os07g05670 hypothetical protein gene hypothetical protein chr7 2706757 2708464 + CDS 9 LOC_Os06g49170 OsWAK64 - OsWAK receptor-like protein kinase gene OsWAK64 - OsWAK receptor-like protein kinase chr6 29790165 29794255 - CDS,downstream 9 LOC_Os07g48910 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 29267225 29268929 - three_prime_UTR,downstream 9 LOC_Os04g22290 hypothetical protein gene hypothetical protein chr4 12610695 12612117 + CDS,promoter 9 LOC_Os08g09430 disease resistance protein RPM1, putative gene disease resistance protein RPM1, putative chr8 5465377 5468307 - CDS,promoter 9 LOC_Os09g27440 hypothetical protein gene hypothetical protein chr9 16659907 16660425 - CDS,downstream 9 LOC_Os07g02440 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 837070 840354 + five_prime_UTR,CDS,promoter 9 LOC_Os04g11040 expressed protein gene expressed protein chr4 5984955 5985674 + CDS 9 LOC_Os06g07340 hypothetical protein gene hypothetical protein chr6 3531649 3532765 - CDS,downstream 9 LOC_Os02g20590 MBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr2 12143092 12144153 - CDS,promoter,downstream 9 LOC_Os03g19610 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr3 11032240 11034260 - CDS,three_prime_UTR 9 LOC_Os03g10980 conserved hypothetical protein gene conserved hypothetical protein chr3 5638952 5642559 + CDS,downstream 9 LOC_Os03g22010 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 12610529 12615884 + CDS,three_prime_UTR,promoter 9 LOC_Os07g06800 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed gene 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed chr7 3315487 3317171 - CDS,promoter,downstream 9 LOC_Os05g44180 osFTL10 FT-Like10 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL10 FT-Like10 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr5 25604876 25606790 - CDS,promoter,downstream 9 LOC_Os08g25690 expressed protein gene expressed protein chr8 15626981 15628238 - three_prime_UTR 9 LOC_Os12g32920 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr12 19860887 19864734 - CDS 9 LOC_Os03g53160 hypothetical protein gene hypothetical protein chr3 30480296 30481160 + CDS,promoter 9 LOC_Os07g04250 hypothetical protein gene hypothetical protein chr7 1872912 1875943 + CDS,promoter,downstream 9 LOC_Os05g51090 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr5 29250342 29252223 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g06670 gibberellin 2-oxidase, putative, expressed gene gibberellin 2-oxidase, putative, expressed chr5 3459593 3465968 + CDS 9 LOC_Os02g44080 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr2 26602492 26603789 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g53190 hypothetical protein gene hypothetical protein chr1 30554286 30556740 + CDS,downstream 9 LOC_Os04g42570 AP2/EREBP transcription factor BABY BOOM, putative, expressed gene AP2/EREBP transcription factor BABY BOOM, putative, expressed chr4 24997062 25001536 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g47550 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28212761 28213938 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g11414 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS58 - MADS-box family gene with MIKCc type-box, expressed chr5 6446824 6458040 - five_prime_UTR,CDS 9 LOC_Os01g36460 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 20239452 20241695 - CDS,downstream 9 LOC_Os02g18410 salt stress root protein RS1, putative, expressed gene salt stress root protein RS1, putative, expressed chr2 10714981 10716778 - CDS,three_prime_UTR 9 LOC_Os07g11790 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr7 6514627 6521049 - CDS,downstream 9 LOC_Os04g59260 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 35059988 35061619 - five_prime_UTR,downstream 9 LOC_Os03g53410 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr3 30634369 30638093 + CDS 9 LOC_Os09g16160 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr9 9856201 9859809 + CDS 9 LOC_Os01g06620 expressed protein gene expressed protein chr1 3121888 3123069 + three_prime_UTR,downstream 9 LOC_Os08g35750 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 22550344 22551319 - three_prime_UTR 9 LOC_Os01g10180 avr9/Cf-9 rapidly elicited protein 146, putative, expressed gene avr9/Cf-9 rapidly elicited protein 146, putative, expressed chr1 5351369 5352612 - five_prime_UTR,downstream 9 LOC_Os08g23460 harpin-induced protein 1 domain containing protein, expressed gene harpin-induced protein 1 domain containing protein, expressed chr8 14205167 14206063 + CDS,three_prime_UTR,promoter 9 LOC_Os01g72834 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr1 42246652 42254359 + CDS,three_prime_UTR,downstream 9 LOC_Os07g30510 TKL_IRAK_DUF26-la.3 - DUF26 kinases have homology to DUF26 containing loci gene TKL_IRAK_DUF26-la.3 - DUF26 kinases have homology to DUF26 containing loci chr7 18046064 18050117 - CDS 9 LOC_Os01g74590 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 43192976 43193852 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g17580 enoyl-CoA hydratase/isomerase family protein gene enoyl-CoA hydratase/isomerase family protein chr11 9782584 9783291 - CDS,promoter,downstream 9 LOC_Os08g41200 BTB/POZ, putative gene BTB/POZ, putative chr8 26020150 26020876 - CDS,promoter,downstream 9 LOC_Os07g41014 glycosyl hydrolases family 17 protein gene glycosyl hydrolases family 17 protein chr7 24533380 24539117 - CDS,promoter 9 LOC_Os07g39950 mitotic checkpoint protein, putative, expressed gene mitotic checkpoint protein, putative, expressed chr7 23964889 23969065 + CDS,downstream 9 LOC_Os01g33910 hypothetical protein gene hypothetical protein chr1 18651181 18651885 + CDS,downstream 9 LOC_Os09g04050 dehydrogenase, putative, expressed gene dehydrogenase, putative, expressed chr9 2082420 2085572 - CDS,three_prime_UTR,promoter 9 LOC_Os10g39750 inducer of CBF expression 2, putative, expressed gene inducer of CBF expression 2, putative, expressed chr10 21173202 21175560 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g04140 hypothetical protein gene hypothetical protein chr5 1851519 1851851 - CDS,downstream 9 LOC_Os12g37200 conserved hypothetical protein gene conserved hypothetical protein chr12 22778623 22787433 + CDS 9 LOC_Os06g40150 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr6 23897259 23898833 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os02g54370 hypro1, putative, expressed gene hypro1, putative, expressed chr2 33318659 33320055 - CDS,three_prime_UTR 9 LOC_Os10g02720 OsWAK99 - OsWAK receptor-like protein kinase, expressed gene OsWAK99 - OsWAK receptor-like protein kinase, expressed chr10 1065852 1071048 - CDS 9 LOC_Os11g05950 expressed protein gene expressed protein chr11 2803512 2804262 - five_prime_UTR,CDS,downstream 9 LOC_Os11g11410 OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA27 - Auxin-responsive Aux/IAA gene family member, expressed chr11 6331645 6338061 + five_prime_UTR,CDS,promoter 9 LOC_Os01g12930 U-box domain containing protein, expressed gene U-box domain containing protein, expressed chr1 7176355 7182963 - CDS,downstream 9 LOC_Os08g43654 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr8 27590121 27595986 - three_prime_UTR 9 LOC_Os11g31740 expressed protein gene expressed protein chr11 18141956 18145305 + five_prime_UTR,promoter 9 LOC_Os11g06770 ethylene-responsive transcription factor ERF110, putative, expressed gene ethylene-responsive transcription factor ERF110, putative, expressed chr11 3303403 3305854 - CDS,five_prime_UTR 9 LOC_Os04g27060 oxidoreductase, aldo/keto reductase family protein, putative, expressed gene oxidoreductase, aldo/keto reductase family protein, putative, expressed chr4 15829523 15833364 + CDS,downstream 9 LOC_Os08g28600 resistance protein, putative gene resistance protein, putative chr8 17467594 17476178 - CDS,downstream 9 LOC_Os02g12530 cytochrome P450 71D6, putative gene cytochrome P450 71D6, putative chr2 6553794 6554309 + CDS,promoter,downstream 9 LOC_Os11g33942 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr11 19364373 19365218 + CDS 9 LOC_Os08g44270 vignain precursor, putative, expressed gene vignain precursor, putative, expressed chr8 27872428 27873885 + CDS,three_prime_UTR 9 LOC_Os01g07660 expressed protein gene expressed protein chr1 3681943 3686407 - three_prime_UTR,promoter 9 LOC_Os12g23750 conserved hypothetical protein gene conserved hypothetical protein chr12 13473063 13473941 + CDS,promoter 9 LOC_Os01g39150 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr1 22035785 22036540 + CDS,promoter 9 LOC_Os12g40710 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr12 25168554 25170761 + CDS,promoter 9 LOC_Os04g51830 OsHKT1;4 - Na+ transporter, expressed gene OsHKT1;4 - Na+ transporter, expressed chr4 30549056 30554207 - five_prime_UTR,downstream 9 LOC_Os06g12700 conserved hypothetical protein gene conserved hypothetical protein chr6 6936046 6936369 - CDS,promoter,downstream 9 LOC_Os02g12230 hypothetical protein gene hypothetical protein chr2 6374629 6375930 + CDS,promoter 9 LOC_Os04g46810 LTPL120 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL120 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr4 27554913 27555674 + three_prime_UTR,promoter,downstream 9 LOC_Os11g35540 expressed protein gene expressed protein chr11 20365705 20369752 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g30120 expressed protein gene expressed protein chr3 17196246 17197136 + CDS,three_prime_UTR,downstream 9 LOC_Os05g09736 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 5520381 5526288 - CDS 9 LOC_Os01g67610 hypothetical protein gene hypothetical protein chr1 39301114 39302153 - CDS,promoter 9 LOC_Os01g51490 hypothetical protein gene hypothetical protein chr1 29588204 29589298 - CDS,downstream 9 LOC_Os12g30080 disease resistance protein RPM1, putative gene disease resistance protein RPM1, putative chr12 17984533 17987203 - CDS,promoter,downstream 9 LOC_Os03g49310 THION39 - Plant thionin family protein precursor, expressed gene THION39 - Plant thionin family protein precursor, expressed chr3 28062190 28062483 - CDS,promoter,downstream 9 LOC_Os10g36100 LTPL157 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL157 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 19232338 19232902 + five_prime_UTR,promoter 9 LOC_Os10g02276 OsWAK96 - OsWAK receptor-like protein kinase gene OsWAK96 - OsWAK receptor-like protein kinase chr10 815226 816179 + CDS,downstream 9 LOC_Os02g45420 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr2 27615342 27617061 + three_prime_UTR,promoter 9 LOC_Os08g30100 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed gene 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed chr8 18506292 18507531 - five_prime_UTR,CDS,downstream 9 LOC_Os05g09140 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 5102129 5107121 + CDS 9 LOC_Os04g56570 heavy metal-associated domain containing protein, expressed gene heavy metal-associated domain containing protein, expressed chr4 33548488 33549206 - CDS,promoter,downstream 9 LOC_Os01g22249 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 12508566 12518229 + three_prime_UTR 9 LOC_Os05g04440 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr5 2044977 2046437 + CDS,three_prime_UTR 9 LOC_Os03g52290 DUF617 domain containing protein gene DUF617 domain containing protein chr3 30025557 30026252 - CDS,downstream 9 LOC_Os08g32780 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative gene bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative chr8 20309869 20312003 + CDS,promoter 9 LOC_Os05g48740 expressed protein gene expressed protein chr5 27872804 27873278 + CDS,promoter 9 LOC_Os11g41360 expressed protein gene expressed protein chr11 24346691 24347452 + CDS 9 LOC_Os02g32140 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr2 18980809 18982986 - five_prime_UTR,downstream 9 LOC_Os05g39870 CAMK_KIN1/SNF1/Nim1_like.24 - CAMK includes calcium/calmodulin depedent protein kinases gene CAMK_KIN1/SNF1/Nim1_like.24 - CAMK includes calcium/calmodulin depedent protein kinases chr5 23366907 23371441 - CDS,downstream 9 LOC_Os07g49140 expressed protein gene expressed protein chr7 29430050 29434270 + five_prime_UTR,CDS,promoter 9 LOC_Os06g35980 hypothetical protein gene hypothetical protein chr6 21014462 21014761 + CDS,promoter,downstream 9 LOC_Os01g43460 C4-dicarboxylate transporter/malic acid transport protein, expressed gene C4-dicarboxylate transporter/malic acid transport protein, expressed chr1 24860540 24863247 - CDS,downstream 9 LOC_Os10g07998 nodulin, putative, expressed gene nodulin, putative, expressed chr10 4307309 4311443 - five_prime_UTR,downstream 9 LOC_Os11g37190 allergen-related, putative gene allergen-related, putative chr11 21500741 21503074 + CDS,promoter,downstream 9 LOC_Os03g60030 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 34135720 34138141 - CDS 9 LOC_Os01g15320 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr1 8576199 8576934 - three_prime_UTR 9 LOC_Os08g03500 MBTB17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 1638182 1639294 + CDS,promoter,downstream 9 LOC_Os03g46180 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 26112985 26114326 + five_prime_UTR,promoter 9 LOC_Os06g20570 glycosyltransferase, putative, expressed gene glycosyltransferase, putative, expressed chr6 11839481 11843304 - five_prime_UTR,CDS,downstream 9 LOC_Os11g08918 hypothetical protein gene hypothetical protein chr11 4711866 4714362 + CDS,downstream 9 LOC_Os09g23760 hypothetical protein gene hypothetical protein chr9 14141914 14143375 - CDS,downstream 9 LOC_Os01g11940 osFTL1 FT-Like1 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL1 FT-Like1 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr1 6493516 6498769 + five_prime_UTR,CDS,promoter 9 LOC_Os05g31610 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr5 18336333 18340661 + CDS,downstream 9 LOC_Os04g52220 expressed protein gene expressed protein chr4 30839517 30839944 + five_prime_UTR,CDS,promoter 9 LOC_Os05g11380 OsMADS66 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS66 - MADS-box family gene with MIKCc type-box, expressed chr5 6426314 6434590 - CDS 9 LOC_Os02g16090 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr2 9155584 9158764 + CDS 9 LOC_Os08g28880 patatin, putative, expressed gene patatin, putative, expressed chr8 17660867 17663808 + five_prime_UTR,CDS,promoter 9 LOC_Os04g42850 hypothetical protein gene hypothetical protein chr4 25178043 25180548 - CDS,downstream 9 LOC_Os01g27100 conserved hypothetical protein gene conserved hypothetical protein chr1 15110506 15111045 + CDS,promoter 9 LOC_Os11g41860 OsFBX429 - F-box domain containing protein, expressed gene OsFBX429 - F-box domain containing protein, expressed chr11 24705405 24707797 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g28820 MBTB38 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB38 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr10 14954589 14955713 + CDS,promoter,downstream 9 LOC_Os02g45200 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr2 27429434 27432818 - three_prime_UTR,five_prime_UTR,promoter,downstream 9 LOC_Os07g17040 Mak16 protein domain containing protein gene Mak16 protein domain containing protein chr7 10029865 10033708 - CDS,promoter 9 LOC_Os10g25340 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr10 13033554 13037252 + five_prime_UTR,CDS,promoter 9 LOC_Os06g29490 expressed protein gene expressed protein chr6 16909988 16915694 + three_prime_UTR 9 LOC_Os11g19290 lipase, putative gene lipase, putative chr11 11045085 11046458 - CDS,promoter,downstream 9 LOC_Os07g34370 gibberellin receptor, putative gene gibberellin receptor, putative chr7 20595759 20599211 - CDS,downstream 9 LOC_Os03g03550 bZIP family transcription factor, putative, expressed gene bZIP family transcription factor, putative, expressed chr3 1550422 1552817 + CDS,promoter 9 LOC_Os02g32480 hypothetical protein gene hypothetical protein chr2 19205476 19206954 + CDS 9 LOC_Os01g51140 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 29381489 29384608 - three_prime_UTR,promoter 9 LOC_Os12g09210 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr12 4806479 4809275 - CDS,three_prime_UTR,promoter 9 LOC_Os11g40690 dehydrogenase, putative, expressed gene dehydrogenase, putative, expressed chr11 23836388 23841705 + CDS 9 LOC_Os07g41350 B12D protein, putative, expressed gene B12D protein, putative, expressed chr7 24767079 24768170 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g20900 expressed protein gene expressed protein chr6 12075314 12078454 - five_prime_UTR,promoter,downstream 9 LOC_Os04g33720 glycosyl hydrolases, putative, expressed gene glycosyl hydrolases, putative, expressed chr4 20240359 20243286 + five_prime_UTR,CDS,promoter 9 LOC_Os11g07680 dirigent, putative, expressed gene dirigent, putative, expressed chr11 3916002 3916728 - CDS,three_prime_UTR,promoter 9 LOC_Os03g30410 hypothetical protein gene hypothetical protein chr3 17338547 17338875 - CDS,promoter 9 LOC_Os10g08290 hypothetical protein gene hypothetical protein chr10 4497450 4497943 + CDS,promoter,downstream 9 LOC_Os01g50750 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr1 29151574 29153808 + CDS,three_prime_UTR 9 LOC_Os12g44050 purple acid phosphatase precursor, putative, expressed gene purple acid phosphatase precursor, putative, expressed chr12 27282855 27283690 - five_prime_UTR,CDS,downstream 9 LOC_Os05g49000 conserved hypothetical protein gene conserved hypothetical protein chr5 28044646 28046253 + CDS,promoter,downstream 9 LOC_Os02g44340 expressed protein gene expressed protein chr2 26817767 26820004 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os12g27220 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr12 15967110 15970797 - CDS,downstream 9 LOC_Os07g15650 hypothetical protein gene hypothetical protein chr7 9080430 9081247 - CDS,promoter 9 LOC_Os11g07570 hypothetical protein gene hypothetical protein chr11 3825735 3827323 + CDS,promoter 9 LOC_Os01g18930 peroxidase precursor, putative gene peroxidase precursor, putative chr1 10700602 10702106 - CDS,promoter,downstream 9 LOC_Os12g32880 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr12 19842756 19844036 - CDS 9 LOC_Os08g44590 gibberellin 20 oxidase 2, putative, expressed gene gibberellin 20 oxidase 2, putative, expressed chr8 28040495 28042874 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os04g29560 hypothetical protein gene hypothetical protein chr4 17390155 17390689 + CDS,promoter,downstream 9 LOC_Os11g04020 major facilitator superfamily antiporter, putative, expressed gene major facilitator superfamily antiporter, putative, expressed chr11 1617495 1622979 - CDS,promoter 9 LOC_Os03g11600 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr3 6040245 6047687 + CDS,three_prime_UTR,promoter 9 LOC_Os05g46840 proline-rich protein, putative, expressed gene proline-rich protein, putative, expressed chr5 27059337 27060268 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g12070 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 6904046 6904294 + CDS,promoter,downstream 9 LOC_Os12g32010 hypothetical protein gene hypothetical protein chr12 19264470 19264979 - CDS,promoter 9 LOC_Os07g05760 hypothetical protein gene hypothetical protein chr7 2771086 2772060 + CDS,promoter 9 LOC_Os07g27060 hypothetical protein gene hypothetical protein chr7 15677541 15677768 + CDS,promoter,downstream 9 LOC_Os10g37160 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr10 19809878 19811755 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g26620 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr3 15207521 15209371 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os05g34325 cytochrome P450 51, putative, expressed gene cytochrome P450 51, putative, expressed chr5 20262809 20265881 + CDS,three_prime_UTR 9 LOC_Os01g51620 KRR1 small subunit processome component, putative, expressed gene KRR1 small subunit processome component, putative, expressed chr1 29644822 29648171 + three_prime_UTR,downstream 9 LOC_Os08g09480 OsFBX268 - F-box domain containing protein gene OsFBX268 - F-box domain containing protein chr8 5489789 5490812 - CDS,promoter 9 LOC_Os07g11510 RAL6 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed gene RAL6 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed chr7 6335113 6335925 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g46200 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr11 27506754 27511983 - CDS 9 LOC_Os04g53606 expressed protein gene expressed protein chr4 31772548 31773525 - three_prime_UTR 9 LOC_Os02g06320 RNA recognition motif 2 domain containing protein, expressed gene RNA recognition motif 2 domain containing protein, expressed chr2 3158637 3160600 + CDS,downstream 9 LOC_Os02g57490 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr2 35221427 35222740 - CDS,three_prime_UTR,promoter 9 LOC_Os04g11400 expressed protein gene expressed protein chr4 6227073 6227919 - CDS,promoter 9 LOC_Os11g24890 hypothetical protein gene hypothetical protein chr11 13720417 13722352 - CDS,promoter 9 LOC_Os05g31420 GRAS family transcription factor containing protein gene GRAS family transcription factor containing protein chr5 18215249 18216931 + CDS,promoter,downstream 9 LOC_Os07g28140 cytochrome P450, putative gene cytochrome P450, putative chr7 16434528 16434845 + CDS,promoter 9 LOC_Os09g23510 hypothetical protein gene hypothetical protein chr9 13977493 13977819 + CDS,promoter,downstream 9 LOC_Os12g41460 conserved hypothetical protein gene conserved hypothetical protein chr12 25654058 25657610 - CDS,promoter,downstream 9 LOC_Os11g06070 expressed protein gene expressed protein chr11 2890450 2892178 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g24250 hypothetical protein gene hypothetical protein chr3 13799285 13799629 + CDS,downstream 9 LOC_Os09g17890 conserved hypothetical protein gene conserved hypothetical protein chr9 10942485 10946943 + CDS,downstream 9 LOC_Os10g28680 DUF581 domain containing protein, expressed gene DUF581 domain containing protein, expressed chr10 14889344 14891646 - five_prime_UTR,downstream 9 LOC_Os10g32020 expressed protein gene expressed protein chr10 16749923 16753809 + CDS,promoter 9 LOC_Os01g46800 OsWRKY15 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY15 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 26686333 26687372 - CDS,promoter 9 LOC_Os01g64580 hypothetical protein gene hypothetical protein chr1 37469130 37470620 + CDS,promoter,downstream 9 LOC_Os02g12280 hypothetical protein gene hypothetical protein chr2 6389914 6391121 - CDS,promoter 9 LOC_Os04g32320 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed gene glycerophosphoryl diester phosphodiesterase family protein, putative, expressed chr4 19201727 19204966 + CDS,three_prime_UTR,downstream 9 LOC_Os06g28340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 16106638 16116336 - CDS,promoter 9 LOC_Os07g13450 RALFL13 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL13 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr7 7709567 7710068 - CDS,promoter,downstream 9 LOC_Os02g39220 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 23682716 23692312 + CDS,promoter 9 LOC_Os05g28210 small hydrophilic plant seed protein, putative, expressed gene small hydrophilic plant seed protein, putative, expressed chr5 16461056 16461978 - three_prime_UTR,promoter,downstream 9 LOC_Os11g32610 chalcone and stilbene synthases, putative gene chalcone and stilbene synthases, putative chr11 18770112 18772046 + CDS,promoter,downstream 9 LOC_Os04g08260 hypothetical protein gene hypothetical protein chr4 4399746 4399994 + CDS,promoter,downstream 9 LOC_Os09g28520 expressed protein gene expressed protein chr9 17349764 17351565 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os01g03220 hypothetical protein gene hypothetical protein chr1 1300527 1301921 + CDS 9 LOC_Os03g55740 SSA4 - 2S albumin seed storage family protein precursor, expressed gene SSA4 - 2S albumin seed storage family protein precursor, expressed chr3 31728317 31729130 - CDS 9 LOC_Os02g40320 PINHEAD, putative gene PINHEAD, putative chr2 24397660 24402635 - CDS,downstream 9 LOC_Os06g03670 dehydration-responsive element-binding protein, putative, expressed gene dehydration-responsive element-binding protein, putative, expressed chr6 1433732 1434858 + CDS,three_prime_UTR 9 LOC_Os09g26210 ZOS9-12 - C2H2 zinc finger protein, expressed gene ZOS9-12 - C2H2 zinc finger protein, expressed chr9 15828338 15829157 - five_prime_UTR,promoter,downstream 9 LOC_Os08g17770 hypothetical protein gene hypothetical protein chr8 10892856 10894844 - CDS,downstream 9 LOC_Os12g36330 hypothetical protein gene hypothetical protein chr12 22211311 22213339 - CDS 9 LOC_Os06g22050 GCRP2 - Glycine and cysteine rich family protein precursor, putative, expressed gene GCRP2 - Glycine and cysteine rich family protein precursor, putative, expressed chr6 12780812 12781944 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g05190 expressed protein gene expressed protein chr2 2484073 2485264 + CDS,three_prime_UTR 9 LOC_Os04g36030 AIG1, putative gene AIG1, putative chr4 21794383 21797903 + CDS,downstream 9 LOC_Os12g28065 expressed protein gene expressed protein chr12 16562320 16563235 - five_prime_UTR,CDS,downstream 9 LOC_Os09g23300 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr9 13830867 13832653 + five_prime_UTR,promoter 9 LOC_Os10g30360 MATH domain containing protein gene MATH domain containing protein chr10 15703340 15704235 + CDS,promoter 9 LOC_Os07g34520 isocitrate lyase, putative, expressed gene isocitrate lyase, putative, expressed chr7 20690061 20692701 - five_prime_UTR,downstream 9 LOC_Os09g20750 expressed protein gene expressed protein chr9 12501599 12502158 - CDS,three_prime_UTR,downstream 9 LOC_Os06g40990 expressed protein gene expressed protein chr6 24481325 24481606 - CDS,promoter,downstream 9 LOC_Os08g41950 OsMADS7 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS7 - MADS-box family gene with MIKCc type-box, expressed chr8 26504466 26509547 + CDS 9 LOC_Os03g27690 hypothetical protein gene hypothetical protein chr3 15872320 15872628 + CDS,promoter 9 LOC_Os10g36500 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr10 19458641 19460805 - three_prime_UTR 9 LOC_Os12g36690 mla1, putative, expressed gene mla1, putative, expressed chr12 22443509 22447726 - five_prime_UTR,CDS,downstream 9 LOC_Os09g17110 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr9 10476590 10481257 + CDS,three_prime_UTR,downstream 9 LOC_Os01g03620 multicopper oxidase domain containing protein, expressed gene multicopper oxidase domain containing protein, expressed chr1 1485400 1487897 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g24060 permease domain containing protein, putative, expressed gene permease domain containing protein, putative, expressed chr11 13197876 13199888 + five_prime_UTR,CDS,promoter 9 LOC_Os04g36650 ZOS4-06 - C2H2 zinc finger protein, expressed gene ZOS4-06 - C2H2 zinc finger protein, expressed chr4 21958642 21959234 + CDS,promoter,downstream 9 LOC_Os11g48130 auxin-induced protein 5NG4, putative gene auxin-induced protein 5NG4, putative chr11 28503792 28506795 + CDS 9 LOC_Os11g41260 snRNP protein, putative gene snRNP protein, putative chr11 24268084 24271210 + CDS 9 LOC_Os02g36030 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 21656739 21658454 + CDS,three_prime_UTR 9 LOC_Os09g20180 hypothetical protein gene hypothetical protein chr9 12088741 12092909 - CDS,promoter,downstream 9 LOC_Os03g51350 expressed protein gene expressed protein chr3 29379240 29381103 + CDS,three_prime_UTR 9 LOC_Os11g39750 hypothetical protein gene hypothetical protein chr11 23235758 23236321 + CDS,promoter,downstream 9 LOC_Os05g23810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 13623967 13629267 - CDS,downstream 9 LOC_Os03g56690 conserved hypothetical protein gene conserved hypothetical protein chr3 32284819 32285574 + CDS,promoter,downstream 9 LOC_Os03g20270 aspartic proteinase nepenthesin-1 precursor, putative gene aspartic proteinase nepenthesin-1 precursor, putative chr3 11458606 11459765 + CDS,promoter,downstream 9 LOC_Os02g10110 Leucine Rich Repeat family protein, expressed gene Leucine Rich Repeat family protein, expressed chr2 5270233 5276454 + CDS,three_prime_UTR,downstream 9 LOC_Os10g40170 expressed protein gene expressed protein chr10 21433439 21434274 - CDS,three_prime_UTR 9 LOC_Os01g48800 purine permease, putative, expressed gene purine permease, putative, expressed chr1 27994748 27996502 + three_prime_UTR,downstream 9 LOC_Os11g03310 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr11 1239059 1244395 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os03g29570 mps one binder kinase activator-like 1A, putative, expressed gene mps one binder kinase activator-like 1A, putative, expressed chr3 16855395 16861637 - CDS 9 LOC_Os11g26720 conserved hypothetical protein gene conserved hypothetical protein chr11 14838296 14841355 - CDS,promoter 9 LOC_Os04g54990 hypothetical protein gene hypothetical protein chr4 32516413 32517263 + CDS,promoter 9 LOC_Os01g47710 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr1 27287262 27291637 - CDS,three_prime_UTR,downstream 9 LOC_Os02g21350 pleiotropic drug resistance protein 5, putative, expressed gene pleiotropic drug resistance protein 5, putative, expressed chr2 12679930 12680637 - CDS,three_prime_UTR,promoter 9 LOC_Os05g03310 hypothetical protein gene hypothetical protein chr5 1345283 1347490 + CDS,promoter,downstream 9 LOC_Os08g34280 cinnamoyl-CoA reductase, putative, expressed gene cinnamoyl-CoA reductase, putative, expressed chr8 21503706 21510943 - five_prime_UTR,CDS,downstream 9 LOC_Os03g58000 expressed protein gene expressed protein chr3 33023991 33025451 - CDS 9 LOC_Os03g46860 helix-loop-helix DNA-binding protein, putative, expressed gene helix-loop-helix DNA-binding protein, putative, expressed chr3 26498238 26502585 - CDS,three_prime_UTR,downstream 9 LOC_Os02g06740 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 3392271 3397700 + CDS,promoter 9 LOC_Os05g27090 basic helix-loop-helix domain containing protein, expressed gene basic helix-loop-helix domain containing protein, expressed chr5 15695599 15697324 - five_prime_UTR,CDS,downstream 9 LOC_Os05g20020 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr5 11699682 11702934 + CDS 9 LOC_Os10g28060 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr10 14489367 14494503 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g23140 copper methylamine oxidase precursor, putative gene copper methylamine oxidase precursor, putative chr6 13497673 13500215 + CDS,downstream 9 LOC_Os05g39710 expressed protein gene expressed protein chr5 23244868 23245611 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g11360 RAL3 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed gene RAL3 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed chr7 6253862 6254628 - five_prime_UTR,CDS 9 LOC_Os03g63370 CRAL/TRIO domain containing protein, expressed gene CRAL/TRIO domain containing protein, expressed chr3 35802833 35807541 - CDS,three_prime_UTR 9 LOC_Os03g50960 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 29103374 29104174 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g32260 conserved hypothetical protein gene conserved hypothetical protein chr4 19157125 19160265 + CDS,promoter,downstream 9 LOC_Os04g45950 amino acid permease family protein, putative, expressed gene amino acid permease family protein, putative, expressed chr4 27028960 27033710 - CDS,downstream 9 LOC_Os01g64310 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr1 37333177 37335186 + CDS,three_prime_UTR 9 LOC_Os10g25400 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr10 13060204 13062099 + CDS 9 LOC_Os03g45619 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 25744019 25758812 - CDS 9 LOC_Os02g15350 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr2 8590286 8593924 - five_prime_UTR,downstream 9 LOC_Os09g21050 hypothetical protein gene hypothetical protein chr9 12692578 12693000 + CDS,promoter 9 LOC_Os10g30162 hsp20/alpha crystallin family protein, putative, expressed gene hsp20/alpha crystallin family protein, putative, expressed chr10 15610305 15612385 + CDS,three_prime_UTR 9 LOC_Os02g20560 fasciclin domain containing protein, expressed gene fasciclin domain containing protein, expressed chr2 12127908 12129258 - five_prime_UTR,downstream 9 LOC_Os10g05860 POEI7 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed gene POEI7 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed chr10 2957869 2959006 - five_prime_UTR,downstream 9 LOC_Os01g14390 hypothetical protein gene hypothetical protein chr1 8057784 8058983 + CDS,promoter,downstream 9 LOC_Os04g11120 expressed protein gene expressed protein chr4 6047147 6048832 + CDS,downstream 9 LOC_Os11g36250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 20878407 20879898 - CDS,downstream 9 LOC_Os12g41570 conserved hypothetical protein gene conserved hypothetical protein chr12 25696107 25696979 - CDS,promoter,downstream 9 LOC_Os09g29510 OsWAK80 - OsWAK receptor-like protein kinase, expressed gene OsWAK80 - OsWAK receptor-like protein kinase, expressed chr9 17948935 17953034 - CDS 9 LOC_Os07g01214 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr7 121255 127031 + CDS,three_prime_UTR 9 LOC_Os12g32080 hypothetical protein gene hypothetical protein chr12 19325629 19326369 - CDS,downstream 9 LOC_Os06g30640 cytochrome P450, putative gene cytochrome P450, putative chr6 17736915 17738432 - CDS,promoter 9 LOC_Os02g10390 chlorophyll A-B binding protein, putative, expressed gene chlorophyll A-B binding protein, putative, expressed chr2 5468367 5470496 - three_prime_UTR 9 LOC_Os02g25020 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr2 14501977 14503610 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os05g49480 transcription factor-related, putative, expressed gene transcription factor-related, putative, expressed chr5 28297957 28299285 + CDS 9 LOC_Os11g47441 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 28081456 28088118 + CDS,promoter 9 LOC_Os02g34900 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 20932291 20940364 + CDS,downstream 9 LOC_Os01g70990 OsGrx_C6 - glutaredoxin subgroup III gene OsGrx_C6 - glutaredoxin subgroup III chr1 41089260 41089637 + CDS,promoter,downstream 9 LOC_Os08g31270 hypothetical protein gene hypothetical protein chr8 19334652 19336115 - CDS,promoter,downstream 9 LOC_Os04g41450 TGF-beta receptor, type I/II extracellular region, putative, expressed gene TGF-beta receptor, type I/II extracellular region, putative, expressed chr4 24375848 24381318 - CDS,three_prime_UTR,promoter 9 LOC_Os03g04670 hypothetical protein gene hypothetical protein chr3 2217596 2219799 - CDS,promoter,downstream 9 LOC_Os11g47600 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28235494 28236786 - three_prime_UTR,promoter,downstream 9 LOC_Os07g27000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 15625802 15630692 + CDS 9 LOC_Os04g27070 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr4 15835319 15839967 - CDS,promoter 9 LOC_Os03g46140 OsFBX101 - F-box domain containing protein gene OsFBX101 - F-box domain containing protein chr3 26091886 26093374 + CDS,downstream 9 LOC_Os09g25610 class I glutamine amidotransferase, putative, expressed gene class I glutamine amidotransferase, putative, expressed chr9 15380631 15383390 + CDS,promoter 9 LOC_Os01g06820 hcr2-0B, putative gene hcr2-0B, putative chr1 3234987 3236799 + CDS 9 LOC_Os12g32640 haemolysin-III, putative, expressed gene haemolysin-III, putative, expressed chr12 19666321 19669970 + three_prime_UTR 9 LOC_Os07g40390 hypothetical protein gene hypothetical protein chr7 24214884 24216870 - CDS,promoter 9 LOC_Os10g22660 hypothetical protein gene hypothetical protein chr10 11707953 11708420 - CDS,downstream 9 LOC_Os01g57880 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr1 33467529 33468948 + CDS 9 LOC_Os10g21180 hypothetical protein gene hypothetical protein chr10 10715583 10715894 + CDS,promoter,downstream 9 LOC_Os01g13810 expressed protein gene expressed protein chr1 7743243 7746746 + CDS 9 LOC_Os11g15620 OsFBX420 - F-box domain containing protein gene OsFBX420 - F-box domain containing protein chr11 8855295 8857645 + CDS,promoter 9 LOC_Os06g29470 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 16895518 16896664 + CDS,promoter,downstream 9 LOC_Os12g07560 expressed protein gene expressed protein chr12 3776544 3777525 - five_prime_UTR 9 LOC_Os06g12740 expressed protein gene expressed protein chr6 6952696 6955089 - three_prime_UTR,promoter 9 LOC_Os07g01440 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr7 290032 291026 + five_prime_UTR,CDS,promoter 9 LOC_Os01g71830 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41602254 41603637 + five_prime_UTR,CDS,promoter 9 LOC_Os07g13634 cytokinin-N-glucosyltransferase 1, putative, expressed gene cytokinin-N-glucosyltransferase 1, putative, expressed chr7 7814447 7831316 + five_prime_UTR,CDS,promoter 9 LOC_Os07g25740 expressed protein gene expressed protein chr7 14773629 14778035 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g09069 unknown gene unknown chr6 4564943 4565300 - CDS,downstream 9 LOC_Os12g18560 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr12 10729685 10730871 + five_prime_UTR,promoter 9 LOC_Os07g39700 expressed protein gene expressed protein chr7 23795617 23796648 + CDS,promoter,downstream 9 LOC_Os06g47160 hypothetical protein gene hypothetical protein chr6 28592052 28594822 + CDS,promoter 9 LOC_Os09g39100 cysteine proteinase EP-B 1 precursor, putative, expressed gene cysteine proteinase EP-B 1 precursor, putative, expressed chr9 22445185 22447871 - CDS,downstream 9 LOC_Os01g05260 hypothetical protein gene hypothetical protein chr1 2477076 2479001 - CDS,promoter 9 LOC_Os01g09330 conserved hypothetical protein gene conserved hypothetical protein chr1 4746121 4747910 + CDS 9 LOC_Os04g48170 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 28487598 28492076 - CDS 9 LOC_Os12g07640 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr12 3839736 3841209 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g13090 hypothetical protein gene hypothetical protein chr7 7498318 7499556 - CDS,downstream 9 LOC_Os02g17080 OsSub16 - Putative Subtilisin homologue gene OsSub16 - Putative Subtilisin homologue chr2 9764689 9770195 - CDS 9 LOC_Os09g39120 thiol protease SEN102 precursor, putative, expressed gene thiol protease SEN102 precursor, putative, expressed chr9 22454977 22457112 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g04990 hypothetical protein gene hypothetical protein chr2 2367921 2368406 + CDS,promoter,downstream 9 LOC_Os08g33020 hypothetical protein gene hypothetical protein chr8 20479632 20480742 - CDS,promoter,downstream 9 LOC_Os06g10780 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr6 5628417 5630998 + CDS,three_prime_UTR,promoter 9 LOC_Os07g29860 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr7 17568517 17571532 + CDS 9 LOC_Os02g39230 cyclin-F1-4, putative gene cyclin-F1-4, putative chr2 23694091 23695761 + CDS,downstream 9 LOC_Os10g18870 dirigent, putative, expressed gene dirigent, putative, expressed chr10 9545515 9547001 + five_prime_UTR,CDS,promoter 9 LOC_Os04g55150 UBA/TS-N domain containing protein, expressed gene UBA/TS-N domain containing protein, expressed chr4 32603602 32609055 + three_prime_UTR,downstream 9 LOC_Os05g06070 E3 ubiquitin-protein ligase SINA-like, putative gene E3 ubiquitin-protein ligase SINA-like, putative chr5 3038628 3039656 + CDS,promoter,downstream 9 LOC_Os07g48170 nucleotidyltransferase, putative, expressed gene nucleotidyltransferase, putative, expressed chr7 28769343 28775333 - five_prime_UTR,CDS,downstream 9 LOC_Os11g05360 RCLEA9 - Root cap and Late embryogenesis related family protein precursor, putative gene RCLEA9 - Root cap and Late embryogenesis related family protein precursor, putative chr11 2374998 2376272 + CDS,promoter 9 LOC_Os09g39170 cysteine proteinase COT44 precursor, putative gene cysteine proteinase COT44 precursor, putative chr9 22491224 22493839 - CDS,promoter 9 LOC_Os11g03360 RNA-directed DNA polymerase, putative gene RNA-directed DNA polymerase, putative chr11 1260957 1266500 - CDS,downstream 9 LOC_Os06g43600 LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL129 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr6 26226107 26227763 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g38150 osmotin, putative, expressed gene osmotin, putative, expressed chr12 23394139 23395341 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os08g32370 mucin-associated surface protein, putative gene mucin-associated surface protein, putative chr8 20043846 20049597 + CDS,promoter,downstream 9 LOC_Os01g67630 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr1 39306400 39309538 + five_prime_UTR,CDS 9 LOC_Os09g21660 expressed protein gene expressed protein chr9 13115491 13117743 - five_prime_UTR,CDS,downstream 9 LOC_Os06g39390 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr6 23378159 23380418 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g03850 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 1574190 1576956 + CDS,promoter 9 LOC_Os01g04340 hsp20/alpha crystallin family protein, putative, expressed gene hsp20/alpha crystallin family protein, putative, expressed chr1 1933117 1934048 + three_prime_UTR 9 LOC_Os04g02640 3-ketoacyl-CoA synthase 6, putative, expressed gene 3-ketoacyl-CoA synthase 6, putative, expressed chr4 992856 994692 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g03520 THION25 - Plant thionin family protein precursor, expressed gene THION25 - Plant thionin family protein precursor, expressed chr2 1430325 1430872 + CDS,three_prime_UTR 9 LOC_Os01g69190 regulatory protein, putative, expressed gene regulatory protein, putative, expressed chr1 40210154 40212438 + five_prime_UTR,CDS,promoter 9 LOC_Os07g09710 OsFBX220 - F-box domain containing protein, expressed gene OsFBX220 - F-box domain containing protein, expressed chr7 5163872 5166067 - five_prime_UTR,downstream 9 LOC_Os10g02670 expressed protein gene expressed protein chr10 1047623 1049453 - CDS 9 LOC_Os04g37970 transporter family protein, putative gene transporter family protein, putative chr4 22408991 22410722 + CDS,promoter 9 LOC_Os03g59670 basic helix-loop-helix, putative, expressed gene basic helix-loop-helix, putative, expressed chr3 33966535 33968447 + CDS,three_prime_UTR,downstream 9 LOC_Os10g10030 OsWAK111 - OsWAK receptor-like protein kinase, expressed gene OsWAK111 - OsWAK receptor-like protein kinase, expressed chr10 5458681 5465611 - CDS 9 LOC_Os06g36520 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr6 21446777 21450136 + CDS 9 LOC_Os11g17340 expressed protein gene expressed protein chr11 9667547 9667962 - CDS,three_prime_UTR,promoter 9 LOC_Os11g10130 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr11 5475405 5478750 + five_prime_UTR,promoter 9 LOC_Os03g26800 LTPL51 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL51 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 15299384 15299803 + CDS,downstream 9 LOC_Os06g34730 expressed protein gene expressed protein chr6 20177123 20178046 - five_prime_UTR,CDS,downstream 9 LOC_Os02g28600 OsFBX50 - F-box domain containing protein gene OsFBX50 - F-box domain containing protein chr2 16918153 16919505 + CDS 9 LOC_Os09g39140 vignain precursor, putative gene vignain precursor, putative chr9 22465311 22466222 - CDS,downstream 9 LOC_Os08g28430 hypothetical protein gene hypothetical protein chr8 17348890 17349364 - CDS,downstream 9 LOC_Os06g16799 unknown gene unknown chr6 9725983 9729388 - five_prime_UTR,downstream 9 LOC_Os09g12150 OsFBX310 - F-box domain containing protein, expressed gene OsFBX310 - F-box domain containing protein, expressed chr9 6872236 6873621 + CDS,three_prime_UTR 9 LOC_Os03g62840 hypothetical protein gene hypothetical protein chr3 35540550 35541113 + CDS,promoter,downstream 9 LOC_Os04g01890 protein kinase, putative gene protein kinase, putative chr4 559485 561482 + CDS,promoter 9 LOC_Os11g37860 stripe rust resistance protein Yr10, putative, expressed gene stripe rust resistance protein Yr10, putative, expressed chr11 21961630 21969278 + CDS,promoter 9 LOC_Os08g02310 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 879669 882286 - CDS 9 LOC_Os07g10090 hypothetical protein gene hypothetical protein chr7 5404854 5407757 - CDS,promoter,downstream 9 LOC_Os06g21930 inorganic phosphate transporter, putative gene inorganic phosphate transporter, putative chr6 12685485 12686679 + CDS,promoter 9 LOC_Os01g42340 conserved hypothetical protein gene conserved hypothetical protein chr1 24037043 24039151 + CDS,promoter 9 LOC_Os12g36610 patatin, putative, expressed gene patatin, putative, expressed chr12 22383662 22385704 + CDS 9 LOC_Os02g36880 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr2 22252964 22254812 + three_prime_UTR,promoter,downstream 9 LOC_Os05g25550 E1-E2 ATPase domain containing protein, expressed gene E1-E2 ATPase domain containing protein, expressed chr5 14790880 14795418 - CDS,three_prime_UTR,five_prime_UTR 9 LOC_Os11g40480 expressed protein gene expressed protein chr11 23694447 23695829 + three_prime_UTR,downstream 9 LOC_Os08g40720 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr8 25767093 25768835 - five_prime_UTR,CDS,downstream 9 LOC_Os07g14020 hypothetical protein gene hypothetical protein chr7 8004674 8005797 + CDS,downstream 9 LOC_Os10g26470 sucrose transporter, putativ, expressed gene sucrose transporter, putativ, expressed chr10 13707567 13713984 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os03g04660 cytochrome P450 86A1, putative, expressed gene cytochrome P450 86A1, putative, expressed chr3 2210803 2212937 + three_prime_UTR 9 LOC_Os02g01300 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr2 165493 166232 - three_prime_UTR,promoter 9 LOC_Os01g25386 multidrug resistance-associated protein, putative, expressed gene multidrug resistance-associated protein, putative, expressed chr1 14339107 14356423 - CDS 9 LOC_Os08g05780 expressed protein gene expressed protein chr8 3092751 3093882 - five_prime_UTR,CDS,downstream 9 LOC_Os11g47670 thaumatin family domain containing protein, expressed gene thaumatin family domain containing protein, expressed chr11 28257940 28258981 + CDS,three_prime_UTR 9 LOC_Os03g07940 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr3 4055775 4060463 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g62480 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr1 36164877 36167896 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g71380 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41364117 41365527 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g01340 gibberellin 2-beta-dioxygenase 7, putative, expressed gene gibberellin 2-beta-dioxygenase 7, putative, expressed chr7 212778 218544 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g05160 sulfate transporter, putative, expressed gene sulfate transporter, putative, expressed chr6 2291596 2297806 - CDS 9 LOC_Os03g19210 hypothetical protein gene hypothetical protein chr3 10795254 10795481 - CDS,promoter,downstream 9 LOC_Os07g34780 ankyrin repeat domain-containing protein, putative gene ankyrin repeat domain-containing protein, putative chr7 20841626 20844999 + CDS,promoter 9 LOC_Os07g13830 OsFBX228 - F-box domain containing protein, expressed gene OsFBX228 - F-box domain containing protein, expressed chr7 7918367 7920184 + CDS,three_prime_UTR 9 LOC_Os02g12270 hypothetical protein gene hypothetical protein chr2 6387518 6387859 - CDS,promoter,downstream 9 LOC_Os03g39760 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 22121837 22124150 + CDS,three_prime_UTR 9 LOC_Os07g08160 early light-induced protein, chloroplast precursor, putative, expressed gene early light-induced protein, chloroplast precursor, putative, expressed chr7 4144913 4145867 + CDS,three_prime_UTR 9 LOC_Os10g31240 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr10 16312130 16315569 + CDS,promoter 9 LOC_Os06g30790 CAF1 family ribonuclease containing protein, putative gene CAF1 family ribonuclease containing protein, putative chr6 17859786 17862357 + CDS,promoter 9 LOC_Os08g01330 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr8 209413 211451 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os10g28330 ZOS10-04 - C2H2 zinc finger protein, expressed gene ZOS10-04 - C2H2 zinc finger protein, expressed chr10 14668335 14671511 - CDS,three_prime_UTR,promoter 9 LOC_Os09g19510 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 11670312 11675422 + CDS 9 LOC_Os08g31340 heavy metal-associated domain containing protein, expressed gene heavy metal-associated domain containing protein, expressed chr8 19380239 19384424 + CDS,three_prime_UTR,downstream 9 LOC_Os04g32510 expressed protein gene expressed protein chr4 19392274 19394355 + CDS,downstream 9 LOC_Os09g13650 microtubule-associated protein, putative, expressed gene microtubule-associated protein, putative, expressed chr9 7963046 7966919 + three_prime_UTR,promoter,downstream 9 LOC_Os02g29000 Cupin domain containing protein gene Cupin domain containing protein chr2 17159318 17160127 - CDS,downstream 9 LOC_Os03g62830 nuclear antigen, putative, expressed gene nuclear antigen, putative, expressed chr3 35536605 35539838 - CDS,downstream 9 LOC_Os04g34170 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 20536076 20537874 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g38480 OsFBX300 - F-box domain containing protein, expressed gene OsFBX300 - F-box domain containing protein, expressed chr8 24349013 24353126 + five_prime_UTR,CDS,promoter 9 LOC_Os07g48710 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr7 29170080 29171239 + three_prime_UTR 9 LOC_Os12g02320 LTPL12 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL12 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr12 736312 737314 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os02g32150 hypothetical protein gene hypothetical protein chr2 18985087 18985701 + CDS,promoter 9 LOC_Os05g27980 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr5 16270077 16270917 - CDS,promoter,downstream 9 LOC_Os02g43400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 26186104 26189068 - CDS 9 LOC_Os05g15850 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr5 8948151 8949299 + CDS,three_prime_UTR 9 LOC_Os10g35180 white-brown complex homolog protein 11, putative, expressed gene white-brown complex homolog protein 11, putative, expressed chr10 18713242 18719601 + five_prime_UTR,CDS,promoter 9 LOC_Os12g32434 hypothetical protein gene hypothetical protein chr12 19535492 19536601 - CDS 9 LOC_Os07g48050 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 28687451 28689381 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g18000 OsFBX283 - F-box domain containing protein, expressed gene OsFBX283 - F-box domain containing protein, expressed chr8 11033079 11050246 - CDS,promoter 9 LOC_Os01g28530 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 15969444 15971675 - CDS,promoter 9 LOC_Os11g30040 esterase PIR7, putative gene esterase PIR7, putative chr11 17006248 17007089 + CDS 9 LOC_Os10g22740 hypothetical protein gene hypothetical protein chr10 11751320 11752865 + CDS,promoter,downstream 9 LOC_Os05g16300 expressed protein gene expressed protein chr5 9232183 9234278 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os04g58920 U-box domain-containing protein, putative, expressed gene U-box domain-containing protein, putative, expressed chr4 34869351 34871049 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os12g31670 expressed protein gene expressed protein chr12 19046562 19047050 + CDS,promoter 9 LOC_Os08g07620 hypothetical protein gene hypothetical protein chr8 4277362 4277691 + CDS,promoter,downstream 9 LOC_Os02g44020 hypothetical protein gene hypothetical protein chr2 26571824 26572752 - CDS,downstream 9 LOC_Os10g20840 LTPL134 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL134 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr10 10495239 10495748 - CDS,three_prime_UTR,promoter 9 LOC_Os01g68820 expressed protein gene expressed protein chr1 39984180 39985455 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g34710 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 21038957 21041658 - CDS,downstream 9 LOC_Os12g39920 hypothetical protein gene hypothetical protein chr12 24636234 24638070 - five_prime_UTR,CDS,downstream 9 LOC_Os05g51340 hypothetical protein gene hypothetical protein chr5 29382729 29384260 + CDS,promoter 9 LOC_Os04g29210 FAD-binding and arabino-lactone oxidase domains containing protein, putative gene FAD-binding and arabino-lactone oxidase domains containing protein, putative chr4 17147237 17149073 + CDS,downstream 9 LOC_Os07g13440 RALFL12 - Rapid ALkalinization Factor RALF family protein precursor, putative gene RALFL12 - Rapid ALkalinization Factor RALF family protein precursor, putative chr7 7707596 7707820 - CDS,downstream 9 LOC_Os01g16714 flavin monooxygenase, putative, expressed gene flavin monooxygenase, putative, expressed chr1 9487801 9492940 + CDS,three_prime_UTR 9 LOC_Os05g45530 hypothetical protein gene hypothetical protein chr5 26332408 26333217 + CDS,promoter,downstream 9 LOC_Os10g40710 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr10 21764406 21766127 - five_prime_UTR,CDS,downstream 9 LOC_Os07g09940 NBS-LRR resistance protein, putative gene NBS-LRR resistance protein, putative chr7 5291922 5292887 - CDS,promoter,downstream 9 LOC_Os05g18860 STIGL2 - Stigma-specific Stig1 family protein precursor, putative gene STIGL2 - Stigma-specific Stig1 family protein precursor, putative chr5 10957431 10957808 + CDS,promoter,downstream 9 LOC_Os02g29010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 17161547 17166870 + CDS,promoter 9 LOC_Os10g09620 OsWAK108 - OsWAK receptor-like protein kinase, expressed gene OsWAK108 - OsWAK receptor-like protein kinase, expressed chr10 5215480 5221183 - CDS,downstream 9 LOC_Os11g03140 hypothetical protein gene hypothetical protein chr11 1130699 1131363 - CDS,downstream 9 LOC_Os04g57070 jasmonate O-methyltransferase, putative gene jasmonate O-methyltransferase, putative chr4 33828981 33830643 + CDS,downstream 9 LOC_Os12g06120 expressed protein gene expressed protein chr12 2858531 2859785 + CDS,downstream 9 LOC_Os01g40499 S-locus lectin protein kinase family protein, putative, expressed gene S-locus lectin protein kinase family protein, putative, expressed chr1 22878860 22894897 - five_prime_UTR,CDS 9 LOC_Os04g33530 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr4 20111479 20113455 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g29994 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr6 17256333 17268684 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os04g57040 hypothetical protein gene hypothetical protein chr4 33812629 33815508 + CDS,promoter,downstream 9 LOC_Os07g15540 ethylene receptor, putative, expressed gene ethylene receptor, putative, expressed chr7 9004175 9007505 - CDS,three_prime_UTR,promoter 9 LOC_Os08g39570 Leucine Rich Repeat family protein, expressed gene Leucine Rich Repeat family protein, expressed chr8 25029126 25036724 + five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os08g13980 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr8 8383574 8384803 - CDS,promoter,downstream 9 LOC_Os04g01354 chalcone synthase, putative, expressed gene chalcone synthase, putative, expressed chr4 257818 262006 - CDS,three_prime_UTR 9 LOC_Os05g20030 DUF617 domain containing protein, expressed gene DUF617 domain containing protein, expressed chr5 11710763 11711554 + CDS,promoter 9 LOC_Os03g13870 expressed protein gene expressed protein chr3 7518673 7520416 - five_prime_UTR,downstream 9 LOC_Os10g37990 hypothetical protein gene hypothetical protein chr10 20280679 20283172 - CDS,downstream 9 LOC_Os05g40384 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr5 23665923 23675826 + five_prime_UTR,CDS,promoter 9 LOC_Os06g03099 expressed protein gene expressed protein chr6 1142666 1143635 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g07310 citrate-binding protein precursor, putative, expressed gene citrate-binding protein precursor, putative, expressed chr12 3601557 3604040 + CDS 9 LOC_Os12g40100 expressed protein gene expressed protein chr12 24759588 24764791 - five_prime_UTR,CDS,downstream 9 LOC_Os12g29430 OsWAK125 - OsWAK receptor-like protein OsWAK-RLP, expressed gene OsWAK125 - OsWAK receptor-like protein OsWAK-RLP, expressed chr12 17471960 17473667 + CDS,promoter 9 LOC_Os09g11760 hypothetical protein gene hypothetical protein chr9 6572385 6575173 - CDS,downstream 9 LOC_Os10g18390 hypothetical protein gene hypothetical protein chr10 9274296 9277300 + CDS,downstream 9 LOC_Os05g02760 expressed protein gene expressed protein chr5 991422 994116 - CDS 9 LOC_Os12g26460 hypothetical protein gene hypothetical protein chr12 15455318 15456116 - CDS,promoter 9 LOC_Os01g13830 expressed protein gene expressed protein chr1 7754841 7759520 + CDS,three_prime_UTR 9 LOC_Os03g55610 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr3 31655152 31656838 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g08470 DnaK family protein, putative gene DnaK family protein, putative chr11 4472523 4476556 - CDS,promoter 9 LOC_Os11g06480 conserved hypothetical protein gene conserved hypothetical protein chr11 3127729 3130185 - CDS,promoter,downstream 9 LOC_Os01g70025 transferase family protein, putative gene transferase family protein, putative chr1 40507915 40509801 + CDS,promoter 9 LOC_Os07g03467 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1387413 1388436 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g49290 PHD finger family protein, putative, expressed gene PHD finger family protein, putative, expressed chr7 29518459 29521153 - CDS 9 LOC_Os06g06300 osFTL3 FT-Like3 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL3 FT-Like3 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr6 2925824 2927475 + five_prime_UTR,CDS 9 LOC_Os03g49050 possible lysine decarboxylase domain containing protein gene possible lysine decarboxylase domain containing protein chr3 27936465 27942002 + CDS,promoter 9 LOC_Os02g40784 WAX2, putative, expressed gene WAX2, putative, expressed chr2 24712178 24718251 - five_prime_UTR,CDS,downstream 9 LOC_Os10g23820 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr10 12143694 12145394 + five_prime_UTR,promoter,downstream 9 LOC_Os03g44710 YABBY domain containing protein, putative, expressed gene YABBY domain containing protein, putative, expressed chr3 25195138 25205042 + five_prime_UTR,promoter,downstream 9 LOC_Os01g13040 expressed protein gene expressed protein chr1 7258786 7259671 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g02400 hypothetical protein gene hypothetical protein chr7 821468 822678 + CDS,promoter,downstream 9 LOC_Os11g43030 von Willebrand factor type A domain containing protein, expressed gene von Willebrand factor type A domain containing protein, expressed chr11 25472529 25476760 + CDS,three_prime_UTR 9 LOC_Os02g43560 OsWRKY34 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY34 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr2 26274384 26278045 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g56810 OsFBX68 - F-box domain containing protein gene OsFBX68 - F-box domain containing protein chr2 34811890 34813900 + CDS,downstream 9 LOC_Os07g25800 OsFBDUF37 - F-box and DUF domain containing protein, expressed gene OsFBDUF37 - F-box and DUF domain containing protein, expressed chr7 14819657 14821255 + CDS,three_prime_UTR,downstream 9 LOC_Os01g39580 anthocyanin regulatory Lc protein, putative gene anthocyanin regulatory Lc protein, putative chr1 22321024 22326326 + CDS 9 LOC_Os07g23570 cytochrome P450 72A1, putative, expressed gene cytochrome P450 72A1, putative, expressed chr7 13322938 13325408 + five_prime_UTR,promoter 9 LOC_Os10g09760 expressed protein gene expressed protein chr10 5294661 5295557 + three_prime_UTR,promoter,downstream 9 LOC_Os02g45770 OsMADS6 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS6 - MADS-box family gene with MIKCc type-box, expressed chr2 27870110 27878210 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os10g21060 cytochrome P450, putative gene cytochrome P450, putative chr10 10593551 10595039 - CDS 9 LOC_Os02g29030 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 17172159 17187680 - CDS 9 LOC_Os04g05070 expressed protein gene expressed protein chr4 2497227 2498419 - three_prime_UTR 9 LOC_Os11g43850 pectinesterase, putative gene pectinesterase, putative chr11 26009201 26011293 - CDS 9 LOC_Os02g38499 F-box domain containing protein gene F-box domain containing protein chr2 23280230 23281363 - CDS 9 LOC_Os09g39750 domain of unknown function DUF966 domain containing protein, expressed gene domain of unknown function DUF966 domain containing protein, expressed chr9 22799753 22801700 - CDS,downstream 9 LOC_Os06g45550 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr6 27570941 27572747 + CDS,promoter,downstream 9 LOC_Os01g18970 peroxidase precursor, putative gene peroxidase precursor, putative chr1 10719395 10720599 - CDS,downstream 9 LOC_Os01g19460 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 11013225 11019340 + CDS,promoter 9 LOC_Os12g43430 thaumatin, putative, expressed gene thaumatin, putative, expressed chr12 26913234 26914099 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g47820 PINHEAD, putative, expressed gene PINHEAD, putative, expressed chr3 27146535 27154511 - CDS,three_prime_UTR,promoter 9 LOC_Os05g24580 MEMO1, putative, expressed gene MEMO1, putative, expressed chr5 14116279 14121428 + CDS,three_prime_UTR,promoter 9 LOC_Os02g09270 cytochrome P450 71A1, putative, expressed gene cytochrome P450 71A1, putative, expressed chr2 4774333 4776359 + three_prime_UTR 9 LOC_Os10g05500 OsFBX370 - F-box domain containing protein, expressed gene OsFBX370 - F-box domain containing protein, expressed chr10 2714927 2717874 - CDS,downstream 9 LOC_Os09g26480 conserved hypothetical protein gene conserved hypothetical protein chr9 16001196 16002357 + CDS 9 LOC_Os08g30660 NB-ARC domain containing protein gene NB-ARC domain containing protein chr8 18895329 18897572 + CDS,promoter 9 LOC_Os12g06160 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr12 2910275 2911591 - three_prime_UTR,promoter,downstream 9 LOC_Os09g37540 uncharacterized protein PA4923, putative, expressed gene uncharacterized protein PA4923, putative, expressed chr9 21642247 21644416 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g05440 DUF677 domain containing protein, putative, expressed gene DUF677 domain containing protein, putative, expressed chr3 2684553 2687287 - five_prime_UTR,CDS,downstream 9 LOC_Os11g14000 ANTH domain containing protein, expressed gene ANTH domain containing protein, expressed chr11 7766775 7768231 - three_prime_UTR 9 LOC_Os07g36630 CSLF8 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed gene CSLF8 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed chr7 21909223 21914291 - five_prime_UTR,downstream 9 LOC_Os02g07650 zinc-binding protein, putative, expressed gene zinc-binding protein, putative, expressed chr2 3971428 3975146 + CDS,three_prime_UTR 9 LOC_Os06g13240 BURP domain containing protein gene BURP domain containing protein chr6 7277366 7281976 + CDS,downstream 9 LOC_Os07g43850 nucleic acid binding protein, putative gene nucleic acid binding protein, putative chr7 26223149 26224429 - CDS,downstream 9 LOC_Os03g58320 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed gene indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed chr3 33219330 33221413 - five_prime_UTR,CDS,downstream 9 LOC_Os07g04350 expressed protein gene expressed protein chr7 1927512 1929431 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g56090 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr3 31945766 31947506 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os05g39260 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr5 22957941 22959250 + three_prime_UTR,promoter 9 LOC_Os01g06120 conserved hypothetical protein gene conserved hypothetical protein chr1 2919425 2920319 - CDS,promoter,downstream 9 LOC_Os09g35540 expressed protein gene expressed protein chr9 20422659 20424604 + CDS 9 LOC_Os11g06700 exo70 exocyst complex subunit, putative, expressed gene exo70 exocyst complex subunit, putative, expressed chr11 3262032 3264304 + CDS,three_prime_UTR,downstream 9 LOC_Os04g49210 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed gene naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed chr4 29153816 29156032 - five_prime_UTR,promoter,downstream 9 LOC_Os04g27020 cytochrome P450, putative gene cytochrome P450, putative chr4 15814530 15817571 + CDS,promoter 9 LOC_Os02g01150 erythronate-4-phosphate dehydrogenase domain containing protein, expressed gene erythronate-4-phosphate dehydrogenase domain containing protein, expressed chr2 78483 82952 - CDS,three_prime_UTR 9 LOC_Os10g33952 unknown gene unknown chr10 18006478 18006655 + CDS,promoter,downstream 9 LOC_Os01g74140 OsWRKY17 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY17 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 42945709 42947706 + CDS,promoter 9 LOC_Os01g56690 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 32713735 32715373 + CDS,promoter 9 LOC_Os12g31748 OsMADS20 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS20 - MADS-box family gene with MIKCc type-box, expressed chr12 19077506 19086718 - CDS 9 LOC_Os11g14570 expressed protein gene expressed protein chr11 8192667 8196576 - CDS 9 LOC_Os03g27610 patatin, putative, expressed gene patatin, putative, expressed chr3 15835260 15837082 + CDS,three_prime_UTR 9 LOC_Os02g57210 hypothetical protein gene hypothetical protein chr2 35047045 35048474 + CDS,promoter 9 LOC_Os02g36830 cytokinin-O-glucosyltransferase 2, putative, expressed gene cytokinin-O-glucosyltransferase 2, putative, expressed chr2 22209188 22212603 + five_prime_UTR,CDS,promoter 9 LOC_Os01g73590 transporter family protein, putative gene transporter family protein, putative chr1 42634684 42636861 - CDS,downstream 9 LOC_Os12g40200 conserved hypothetical protein gene conserved hypothetical protein chr12 24849179 24852034 - CDS 9 LOC_Os04g27010 hypothetical protein gene hypothetical protein chr4 15810743 15811090 - CDS,promoter 9 LOC_Os05g02150 expressed protein gene expressed protein chr5 658106 660255 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g43040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 25477902 25480653 + CDS,promoter 9 LOC_Os09g06690 hypothetical protein gene hypothetical protein chr9 3179559 3179768 + CDS,promoter 9 LOC_Os01g64100 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr1 37234738 37236314 + three_prime_UTR 9 LOC_Os08g07040 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr8 3940124 3943799 - CDS,downstream 9 LOC_Os06g35860 hypothetical protein gene hypothetical protein chr6 20923539 20926121 + CDS,downstream 9 LOC_Os11g41960 hypothetical protein gene hypothetical protein chr11 24766132 24766569 + CDS,downstream 9 LOC_Os05g48730 hypothetical protein gene hypothetical protein chr5 27866381 27866632 + CDS,promoter,downstream 9 LOC_Os01g57230 BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed gene BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed chr1 33063342 33066790 - CDS 9 LOC_Os11g41365 expressed protein gene expressed protein chr11 24359254 24363037 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g31470 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr7 18657762 18659324 - CDS,promoter,downstream 9 LOC_Os11g04630 hypothetical protein gene hypothetical protein chr11 1969409 1970622 + CDS,promoter 9 LOC_Os11g20600 hypothetical protein gene hypothetical protein chr11 11932916 11933705 + CDS 9 LOC_Os03g11614 OsMADS1 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS1 - MADS-box family gene with MIKCc type-box, expressed chr3 6051750 6060369 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g43300 expressed protein gene expressed protein chr12 26839149 26844602 + CDS 9 LOC_Os07g04310 hypothetical protein gene hypothetical protein chr7 1902121 1904582 - CDS 9 LOC_Os04g01550 peroxidase precursor, putative gene peroxidase precursor, putative chr4 374408 375416 - CDS,downstream 9 LOC_Os09g24490 basic helix-loop-helix family protein, putative, expressed gene basic helix-loop-helix family protein, putative, expressed chr9 14582472 14585344 - three_prime_UTR,promoter,downstream 9 LOC_Os05g24660 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr5 14204027 14205052 - CDS,downstream 9 LOC_Os05g12230 hypothetical protein gene hypothetical protein chr5 6999879 7002069 - CDS 9 LOC_Os06g13460 SAM dependent carboxyl methyltransferase family protein, putative, expressed gene SAM dependent carboxyl methyltransferase family protein, putative, expressed chr6 7405038 7407610 - five_prime_UTR,downstream 9 LOC_Os03g14642 LTPL107 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL107 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 7957930 7958820 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g10010 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr4 5381163 5382656 - five_prime_UTR,CDS 9 LOC_Os04g23220 expressed protein gene expressed protein chr4 13210840 13215816 - five_prime_UTR,CDS,downstream 9 LOC_Os09g24500 hypothetical protein gene hypothetical protein chr9 14598025 14599146 + CDS,promoter 9 LOC_Os12g14580 tetraspanin family protein, putative gene tetraspanin family protein, putative chr12 8325263 8326965 + CDS,promoter,downstream 9 LOC_Os09g13770 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 8065658 8066308 - CDS,downstream 9 LOC_Os09g16580 amidase family protein, putative gene amidase family protein, putative chr9 10173376 10176698 - CDS,promoter 9 LOC_Os03g47693 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr3 27014701 27021877 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g23800 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr5 13610955 13614645 - CDS,promoter 9 LOC_Os10g30690 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr10 15912568 15916764 + five_prime_UTR,promoter 9 LOC_Os03g56940 app1, putative, expressed gene app1, putative, expressed chr3 32418522 32419676 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g41510 D-mannose binding lectin family protein gene D-mannose binding lectin family protein chr6 24887619 24890114 + CDS,downstream 9 LOC_Os03g42200 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr3 23470452 23474001 - five_prime_UTR,downstream 9 LOC_Os02g46940 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 28646886 28649646 + CDS,promoter,downstream 9 LOC_Os01g73240 expressed protein gene expressed protein chr1 42455795 42456433 + CDS,downstream 9 LOC_Os08g01700 basic helix-loop-helix family protein, putative, expressed gene basic helix-loop-helix family protein, putative, expressed chr8 417808 419578 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os03g62270 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 35259071 35262618 + three_prime_UTR,downstream 9 LOC_Os01g66290 OsMADS21 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS21 - MADS-box family gene with MIKCc type-box, expressed chr1 38499837 38504084 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os04g53990 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr4 31981617 31984497 + CDS,three_prime_UTR,promoter 9 LOC_Os04g34710 hypothetical protein gene hypothetical protein chr4 20843808 20844750 + CDS,promoter,downstream 9 LOC_Os03g41150 hypothetical protein gene hypothetical protein chr3 22878500 22878943 + CDS,downstream 9 LOC_Os04g08080 expressed protein gene expressed protein chr4 4314524 4316921 - CDS,three_prime_UTR,downstream 9 LOC_Os08g27210 LTPL3 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL3 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr8 16616614 16617412 + three_prime_UTR 9 LOC_Os05g48560 expressed protein gene expressed protein chr5 27760699 27765260 - CDS,downstream 9 LOC_Os04g32830 expressed protein gene expressed protein chr4 19650093 19650986 - CDS,promoter,downstream 9 LOC_Os01g38380 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr1 21554519 21555712 - CDS 9 LOC_Os01g51580 expressed protein gene expressed protein chr1 29621369 29622111 - CDS,promoter 9 LOC_Os04g26100 hypothetical protein gene hypothetical protein chr4 15187451 15187828 + CDS,promoter,downstream 9 LOC_Os05g49100 OsWRKY49 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY49 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr5 28092048 28095344 + CDS,three_prime_UTR,downstream 9 LOC_Os04g48400 HOTHEAD precursor, putative, expressed gene HOTHEAD precursor, putative, expressed chr4 28685166 28687585 + five_prime_UTR,promoter 9 LOC_Os06g50830 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr6 30753646 30757414 - five_prime_UTR,downstream 9 LOC_Os12g15920 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr12 9066427 9074693 + CDS 9 LOC_Os08g44080 hypothetical protein gene hypothetical protein chr8 27756868 27757629 + CDS 9 LOC_Os07g39960 ZOS7-07 - C2H2 zinc finger protein gene ZOS7-07 - C2H2 zinc finger protein chr7 23972464 23975725 + CDS,promoter,downstream 9 LOC_Os12g42340 OsFBX464 - F-box domain containing protein gene OsFBX464 - F-box domain containing protein chr12 26289786 26293447 - CDS,downstream 9 LOC_Os12g01355 expressed protein gene expressed protein chr12 209190 212372 - three_prime_UTR,promoter 9 LOC_Os03g24760 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr3 14105889 14108851 - CDS,promoter 9 LOC_Os08g25230 conserved hypothetical protein gene conserved hypothetical protein chr8 15327402 15328729 - CDS,promoter 9 LOC_Os09g29480 2-aminoethanethiol dioxygenase, putative, expressed gene 2-aminoethanethiol dioxygenase, putative, expressed chr9 17928688 17931515 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g44450 dirigent, putative, expressed gene dirigent, putative, expressed chr7 26553544 26554619 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os09g32100 expressed protein gene expressed protein chr9 19165940 19167434 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g05350 hypothetical protein gene hypothetical protein chr1 2528389 2531475 + CDS,downstream 9 LOC_Os07g03730 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1522653 1523629 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g23530 terpene synthase, putative gene terpene synthase, putative chr1 13210961 13217537 + CDS,promoter 9 LOC_Os01g42110 nodulin MtN3 family protein, putative gene nodulin MtN3 family protein, putative chr1 23876580 23879202 + CDS 9 LOC_Os10g10798 expressed protein gene expressed protein chr10 5992309 5994868 - five_prime_UTR 9 LOC_Os04g34010 aluminum-activated malate transporter, putative, expressed gene aluminum-activated malate transporter, putative, expressed chr4 20420852 20424185 - five_prime_UTR,CDS,downstream 9 LOC_Os08g02830 plant protein of unknown function domain containing protein gene plant protein of unknown function domain containing protein chr8 1184494 1188284 - CDS 9 LOC_Os07g40300 ZOS7-10 - C2H2 zinc finger protein, expressed gene ZOS7-10 - C2H2 zinc finger protein, expressed chr7 24163232 24164047 + three_prime_UTR,downstream 9 LOC_Os02g47810 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr2 29232195 29235893 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g44610 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr6 26936150 26940031 + five_prime_UTR,CDS,promoter 9 LOC_Os11g42860 conserved hypothetical protein gene conserved hypothetical protein chr11 25345389 25351939 - CDS,promoter,downstream 9 LOC_Os07g05460 flavonol sulfotransferase, putative gene flavonol sulfotransferase, putative chr7 2516315 2518044 - CDS,promoter,downstream 9 LOC_Os01g55100 slTCP3, putative, expressed gene slTCP3, putative, expressed chr1 31698406 31700450 + three_prime_UTR,downstream 9 LOC_Os09g20050 hypothetical protein gene hypothetical protein chr9 12013838 12017214 + CDS 9 LOC_Os02g19670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 11509234 11511319 - CDS,promoter 9 LOC_Os04g46130 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr4 27148555 27150069 - five_prime_UTR,CDS,downstream 9 LOC_Os09g39070 thiol protease SEN102 precursor, putative, expressed gene thiol protease SEN102 precursor, putative, expressed chr9 22426984 22430027 - five_prime_UTR,downstream 9 LOC_Os01g21670 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr1 12156429 12160742 - five_prime_UTR,downstream 9 LOC_Os06g29710 OsFBD12 - F-box and FBD domain containing protein, expressed gene OsFBD12 - F-box and FBD domain containing protein, expressed chr6 17053548 17065628 + CDS,three_prime_UTR,downstream 9 LOC_Os07g03409 SCP-like extracellular protein gene SCP-like extracellular protein chr7 1367558 1368076 + CDS,promoter,downstream 9 LOC_Os11g17440 enoyl-CoA hydratase/isomerase family protein gene enoyl-CoA hydratase/isomerase family protein chr11 9714538 9722664 - CDS,downstream 9 LOC_Os03g27090 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr3 15511157 15512762 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g05060 expressed protein gene expressed protein chr7 2230960 2233431 - five_prime_UTR,CDS,downstream 9 LOC_Os07g05210 dof zinc finger protein 2, putative gene dof zinc finger protein 2, putative chr7 2337785 2338183 - CDS,promoter 9 LOC_Os06g19490 hypothetical protein gene hypothetical protein chr6 11099797 11100294 - CDS,promoter,downstream 9 LOC_Os01g09550 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr1 4878207 4884949 - five_prime_UTR,three_prime_UTR,CDS,downstream 9 LOC_Os08g15420 CSLC3 - cellulose synthase-like family C, expressed gene CSLC3 - cellulose synthase-like family C, expressed chr8 9382344 9386794 + CDS,three_prime_UTR,promoter 9 LOC_Os06g06640 conserved hypothetical protein gene conserved hypothetical protein chr6 3118930 3119280 + CDS,promoter 9 LOC_Os12g32450 expressed protein gene expressed protein chr12 19550313 19556635 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os12g11350 hypothetical protein gene hypothetical protein chr12 6118813 6120373 - CDS,promoter,downstream 9 LOC_Os02g28200 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr2 16686048 16687654 - CDS,downstream 9 LOC_Os03g43060 OsFBX96 - F-box domain containing protein gene OsFBX96 - F-box domain containing protein chr3 24016785 24021582 - CDS,downstream 9 LOC_Os02g07440 DEFL78 - Defensin and Defensin-like DEFL family gene DEFL78 - Defensin and Defensin-like DEFL family chr2 3843535 3843984 + CDS,promoter,downstream 9 LOC_Os01g72749 unknown gene unknown chr1 42208649 42209195 - CDS,downstream 9 LOC_Os04g06300 expressed protein gene expressed protein chr4 3291502 3295869 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os08g07590 hypothetical protein gene hypothetical protein chr8 4262886 4263980 + CDS,promoter,downstream 9 LOC_Os04g04350 hypothetical protein gene hypothetical protein chr4 2042488 2043555 + CDS,downstream 9 LOC_Os11g38340 hypothetical protein gene hypothetical protein chr11 22242765 22246116 - CDS 9 LOC_Os05g04000 expressed protein gene expressed protein chr5 1795972 1797034 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os08g08750 hypothetical protein gene hypothetical protein chr8 5072107 5072526 - CDS,promoter 9 LOC_Os11g33394 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr11 19290236 19296806 + CDS,three_prime_UTR 9 LOC_Os06g21950 inorganic phosphate transporter, putative, expressed gene inorganic phosphate transporter, putative, expressed chr6 12690976 12693850 - CDS,three_prime_UTR,downstream 9 LOC_Os03g11940 hypothetical protein gene hypothetical protein chr3 6257333 6260406 - CDS,promoter,downstream 9 LOC_Os01g37590 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr1 21037761 21040038 + five_prime_UTR,promoter 9 LOC_Os07g31790 CXE carboxylesterase, putative gene CXE carboxylesterase, putative chr7 18892449 18893795 + CDS,promoter 9 LOC_Os02g01365 expressed protein gene expressed protein chr2 199224 207221 + CDS 9 LOC_Os01g63510 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr1 36812681 36813980 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g07360 hypothetical protein gene hypothetical protein chr11 3703861 3705546 - CDS,downstream 9 LOC_Os05g40110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 23502528 23508079 - CDS,downstream 9 LOC_Os01g18490 hypothetical protein gene hypothetical protein chr1 10398921 10399585 - CDS,downstream 9 LOC_Os04g02520 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr4 920713 928966 - CDS,downstream 9 LOC_Os03g48560 N-acetylglucosaminyltransferase, putative, expressed gene N-acetylglucosaminyltransferase, putative, expressed chr3 27671515 27674807 + CDS,three_prime_UTR,downstream 9 LOC_Os02g44106 expansin precursor, putative gene expansin precursor, putative chr2 26632755 26634119 + CDS,downstream 9 LOC_Os10g39130 OsMADS56 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS56 - MADS-box family gene with MIKCc type-box, expressed chr10 20791431 20802276 + three_prime_UTR,CDS 9 LOC_Os05g14220 tyrosine protein kinase domain containing protein, putative, expressed gene tyrosine protein kinase domain containing protein, putative, expressed chr5 7972957 7975699 - five_prime_UTR,downstream 9 LOC_Os01g45234 unknown gene unknown chr1 25669425 25670045 + CDS,promoter 9 LOC_Os04g50820 oligopeptide transporter, putative, expressed gene oligopeptide transporter, putative, expressed chr4 29877298 29880452 + CDS 9 LOC_Os05g45230 OsWRKY58 - Superfamily of TFs having WRKY and zinc finger domains gene OsWRKY58 - Superfamily of TFs having WRKY and zinc finger domains chr5 26194315 26195173 - CDS,promoter,downstream 9 LOC_Os01g42350 pleiotropic drug resistance protein, putative gene pleiotropic drug resistance protein, putative chr1 24046500 24054874 - CDS,downstream 9 LOC_Os01g48540 glyoxal oxidase-related, putative, expressed gene glyoxal oxidase-related, putative, expressed chr1 27839161 27841347 + five_prime_UTR,CDS,promoter 9 LOC_Os02g10000 zinc-binding protein, putative, expressed gene zinc-binding protein, putative, expressed chr2 5202091 5204588 - CDS,downstream 9 LOC_Os01g08220 gibberellin 3-beta-dioxygenase 2-2, putative, expressed gene gibberellin 3-beta-dioxygenase 2-2, putative, expressed chr1 4002659 4003946 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os10g10320 conserved hypothetical protein gene conserved hypothetical protein chr10 5686781 5687662 - CDS,promoter,downstream 9 LOC_Os12g13810 caffeic acid 3-O-methyltransferase, putative gene caffeic acid 3-O-methyltransferase, putative chr12 7803920 7804760 - CDS,downstream 9 LOC_Os06g02680 expressed protein gene expressed protein chr6 958782 961222 - CDS,three_prime_UTR,promoter 9 LOC_Os03g48770 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr3 27781104 27781967 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g36310 hypothetical protein gene hypothetical protein chr2 21915738 21916590 - CDS,downstream 9 LOC_Os02g08070 OsSPL5 - SBP-box gene family member, expressed gene OsSPL5 - SBP-box gene family member, expressed chr2 4247469 4251022 + CDS,downstream 9 LOC_Os04g48180 hypothetical protein gene hypothetical protein chr4 28504234 28505705 + CDS,promoter 9 LOC_Os12g43530 no apical meristem protein, putative gene no apical meristem protein, putative chr12 26973985 26976015 - CDS 9 LOC_Os08g07500 DUF617 domain containing protein, expressed gene DUF617 domain containing protein, expressed chr8 4210446 4211917 - three_prime_UTR 9 LOC_Os06g44260 synthase, putative, expressed gene synthase, putative, expressed chr6 26697965 26699045 - CDS 9 LOC_Os11g37280 LTPL68 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL68 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 21550719 21552410 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g38100 expressed protein gene expressed protein chr1 21336928 21339908 - three_prime_UTR,downstream 9 LOC_Os04g33370 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr4 20039385 20041365 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os02g28570 hypothetical protein gene hypothetical protein chr2 16901844 16906742 + CDS 9 LOC_Os12g14740 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 8435584 8437856 - CDS 9 LOC_Os10g18660 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 9388870 9397692 - CDS,downstream 9 LOC_Os11g39920 expressed protein gene expressed protein chr11 23325847 23329679 + CDS,three_prime_UTR,promoter 9 LOC_Os10g34910 secretory protein, putative, expressed gene secretory protein, putative, expressed chr10 18563896 18564731 - five_prime_UTR,CDS,downstream 9 LOC_Os05g37640 hypothetical protein gene hypothetical protein chr5 21966665 21968486 + CDS,promoter 9 LOC_Os12g17250 hypothetical protein gene hypothetical protein chr12 9872917 9873833 - CDS,downstream 9 LOC_Os01g21700 hypothetical protein gene hypothetical protein chr1 12175131 12175700 + CDS 9 LOC_Os07g41890 DC1 domain-containing protein, putative gene DC1 domain-containing protein, putative chr7 25096712 25097269 + CDS,promoter,downstream 9 LOC_Os06g51180 lysine ketoglutarate reductase trans-splicing related 1, putative gene lysine ketoglutarate reductase trans-splicing related 1, putative chr6 30956573 30964056 + CDS,downstream 9 LOC_Os11g37270 AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed gene AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed chr11 21545788 21547514 - three_prime_UTR,downstream 9 LOC_Os06g07690 hypothetical protein gene hypothetical protein chr6 3720624 3722003 + CDS,downstream 9 LOC_Os10g40720 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr10 21776280 21778202 - CDS,three_prime_UTR,promoter 9 LOC_Os08g28560 expressed protein gene expressed protein chr8 17436841 17441014 - five_prime_UTR,CDS,downstream 9 LOC_Os02g17090 OsSub17 - Putative Subtilisin homologue, expressed gene OsSub17 - Putative Subtilisin homologue, expressed chr2 9778408 9782063 - CDS,three_prime_UTR,promoter 9 LOC_Os05g46190 expressed protein gene expressed protein chr5 26729380 26730996 + three_prime_UTR,downstream 9 LOC_Os07g04450 expressed protein gene expressed protein chr7 1968750 1971040 + three_prime_UTR,downstream 9 LOC_Os06g09810 ethylene-responsive transcription factor, putative gene ethylene-responsive transcription factor, putative chr6 4997065 4997688 + CDS,promoter,downstream 9 LOC_Os02g37530 conserved hypothetical protein gene conserved hypothetical protein chr2 22643700 22643939 - CDS,downstream 9 LOC_Os08g05110 expressed protein gene expressed protein chr8 2638354 2639164 + five_prime_UTR,promoter 9 LOC_Os12g01290 ulp1 protease family protein, putative, expressed gene ulp1 protease family protein, putative, expressed chr12 164073 168377 + CDS 9 LOC_Os01g74550 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 43174403 43177963 - CDS,downstream 9 LOC_Os10g40614 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21714584 21715514 + five_prime_UTR,promoter 9 LOC_Os01g02980 hypothetical protein gene hypothetical protein chr1 1119319 1125749 + CDS 9 LOC_Os02g28180 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 16674535 16677212 + CDS,promoter,downstream 9 LOC_Os11g41070 conserved hypothetical protein gene conserved hypothetical protein chr11 24128921 24130156 + CDS,promoter,downstream 9 LOC_Os10g30380 cytochrome P450, putative gene cytochrome P450, putative chr10 15718499 15721237 - CDS,downstream 9 LOC_Os02g17150 OsSub18 - Putative Subtilisin homologue, expressed gene OsSub18 - Putative Subtilisin homologue, expressed chr2 9826265 9829110 - CDS,downstream 9 LOC_Os01g11760 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 6364028 6366159 + CDS,promoter 9 LOC_Os01g46390 DUF538 domain containing protein, putative gene DUF538 domain containing protein, putative chr1 26397220 26397630 + CDS,promoter,downstream 9 LOC_Os10g33250 WAX2, putative, expressed gene WAX2, putative, expressed chr10 17377724 17383628 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os01g27070 conserved hypothetical protein gene conserved hypothetical protein chr1 15098874 15099431 + CDS,promoter 9 LOC_Os04g24340 phytase, putative gene phytase, putative chr4 13939791 13940992 - CDS,downstream 9 LOC_Os02g49420 fasciclin-like arabinogalactan precursor protein, putative, expressed gene fasciclin-like arabinogalactan precursor protein, putative, expressed chr2 30192724 30193979 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g45510 expressed protein gene expressed protein chr4 26740670 26741981 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g03870 expressed protein gene expressed protein chr1 1640234 1643237 - five_prime_UTR,downstream 9 LOC_Os11g44120 hypothetical protein gene hypothetical protein chr11 26171798 26172267 + CDS,promoter 9 LOC_Os04g32620 ethylene-responsive transcription factor ERF114, putative, expressed gene ethylene-responsive transcription factor ERF114, putative, expressed chr4 19479694 19484059 + three_prime_UTR,promoter 9 LOC_Os08g20130 flavonol sulfotransferase, putative, expressed gene flavonol sulfotransferase, putative, expressed chr8 12065874 12067462 + five_prime_UTR,CDS,promoter 9 LOC_Os11g44380 expressed protein gene expressed protein chr11 26359765 26361241 - three_prime_UTR 9 LOC_Os11g38050 phosphoesterase family protein, putative, expressed gene phosphoesterase family protein, putative, expressed chr11 22103852 22110634 - CDS,downstream 9 LOC_Os08g07660 expressed protein gene expressed protein chr8 4289421 4290286 + CDS,three_prime_UTR,promoter 9 LOC_Os07g42470 hypothetical protein gene hypothetical protein chr7 25422247 25424371 + CDS,promoter 9 LOC_Os12g17570 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr12 10067403 10069844 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g15230 expressed protein gene expressed protein chr7 8782324 8784202 - CDS,downstream 9 LOC_Os04g56500 expressed protein gene expressed protein chr4 33491200 33498423 - three_prime_UTR 9 LOC_Os03g06139 ABC-2 type transporter domain containing protein, expressed gene ABC-2 type transporter domain containing protein, expressed chr3 3074915 3084985 - CDS,downstream 9 LOC_Os09g37650 flavin-containing monooxygenase family protein, putative, expressed gene flavin-containing monooxygenase family protein, putative, expressed chr9 21696387 21701096 - three_prime_UTR,promoter 9 LOC_Os07g48560 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr7 29072051 29074695 + CDS,three_prime_UTR,promoter 9 LOC_Os03g59570 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr3 33898696 33900484 + five_prime_UTR,promoter 9 LOC_Os06g31070 PROLM24 - Prolamin precursor, expressed gene PROLM24 - Prolamin precursor, expressed chr6 18071225 18071907 - CDS 9 LOC_Os12g43580 expressed protein gene expressed protein chr12 27012593 27016344 + five_prime_UTR,promoter 9 LOC_Os09g27390 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 16643542 16646280 - CDS 9 LOC_Os10g05980 POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 3015863 3017051 + five_prime_UTR,CDS,promoter 9 LOC_Os01g51060 hydrolase, putative, expressed gene hydrolase, putative, expressed chr1 29325644 29333750 - CDS 9 LOC_Os06g16650 hypothetical protein gene hypothetical protein chr6 9572223 9572887 - CDS 9 LOC_Os09g20190 hypothetical protein gene hypothetical protein chr9 12099943 12102605 + CDS,promoter,downstream 9 LOC_Os09g22000 hydrolase, HAD superfamily, Cof family, putative, expressed gene hydrolase, HAD superfamily, Cof family, putative, expressed chr9 13318822 13324706 + CDS 9 LOC_Os09g13470 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr9 7796868 7799142 + CDS,three_prime_UTR 9 LOC_Os05g51080 hypothetical protein gene hypothetical protein chr5 29249346 29250011 - CDS,downstream 9 LOC_Os03g12760 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr3 6825703 6831152 - CDS,promoter,downstream 9 LOC_Os12g18520 hypothetical protein gene hypothetical protein chr12 10707377 10707694 + CDS,promoter,downstream 9 LOC_Os11g33000 SSA5 - 2S albumin seed storage family protein precursor, expressed gene SSA5 - 2S albumin seed storage family protein precursor, expressed chr11 19042976 19043611 + five_prime_UTR,CDS 9 LOC_Os11g44110 hypothetical protein gene hypothetical protein chr11 26169683 26170521 + CDS,promoter,downstream 9 LOC_Os01g59470 hypothetical protein gene hypothetical protein chr1 34397387 34399098 + CDS,promoter,downstream 9 LOC_Os10g29495 speckle-type POZ protein, putative, expressed gene speckle-type POZ protein, putative, expressed chr10 15253231 15259968 + CDS,promoter 9 LOC_Os06g39790 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 23638497 23642513 - CDS 9 LOC_Os05g41420 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr5 24191954 24194439 + CDS 9 LOC_Os02g20530 hypothetical protein gene hypothetical protein chr2 12106516 12110223 + CDS,promoter 9 LOC_Os11g43830 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr11 26003914 26006459 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g08320 ZIM domain containing protein, putative, expressed gene ZIM domain containing protein, putative, expressed chr3 4235726 4237276 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g16660 hypothetical protein gene hypothetical protein chr11 9230203 9232484 + CDS,downstream 9 LOC_Os11g40450 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 23654013 23666510 - CDS 9 LOC_Os06g34930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 20313564 20314273 - CDS,downstream 9 LOC_Os03g51740 aminotransferase, classes I and II, domain containing protein, expressed gene aminotransferase, classes I and II, domain containing protein, expressed chr3 29653702 29655967 - three_prime_UTR,promoter,downstream 9 LOC_Os03g22590 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr3 13003404 13006848 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g71680 glycosyl hydrolases family 17, putative gene glycosyl hydrolases family 17, putative chr1 41535934 41537277 - CDS,promoter 9 LOC_Os11g29420 LTPL30 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL30 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr11 16614075 16615243 - CDS,downstream 9 LOC_Os01g48530 expressed protein gene expressed protein chr1 27832839 27834986 + CDS,three_prime_UTR,downstream 9 LOC_Os11g01130 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr11 67344 69989 + CDS,promoter 9 LOC_Os01g16390 NB-ARC domain containing protein gene NB-ARC domain containing protein chr1 9305084 9308821 - CDS,promoter 9 LOC_Os07g37210 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr7 22292742 22294316 - CDS,downstream 9 LOC_Os03g09200 domain of unknown function DUF966 domain containing protein, expressed gene domain of unknown function DUF966 domain containing protein, expressed chr3 4791054 4797617 - CDS,three_prime_UTR,promoter 9 LOC_Os09g15520 oleosin, putative, expressed gene oleosin, putative, expressed chr9 9495338 9496107 + five_prime_UTR,CDS,promoter 9 LOC_Os08g06320 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr8 3492324 3493797 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os10g39970 harpin-induced protein 1 domain containing protein, expressed gene harpin-induced protein 1 domain containing protein, expressed chr10 21335345 21336463 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g05272 pectate lyase precursor, putative gene pectate lyase precursor, putative chr6 2377130 2378274 + CDS,promoter,downstream 9 LOC_Os03g61510 pectinesterase inhibitor domain containing protein, expressed gene pectinesterase inhibitor domain containing protein, expressed chr3 34884005 34884919 - CDS,three_prime_UTR 9 LOC_Os12g39030 BED zinc finger family protein gene BED zinc finger family protein chr12 23973808 23976462 + CDS 9 LOC_Os05g50270 GATA zinc finger domain containing protein, expressed gene GATA zinc finger domain containing protein, expressed chr5 28754960 28756226 + five_prime_UTR,promoter 9 LOC_Os03g02800 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr3 1088160 1092718 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g43130 conserved hypothetical protein gene conserved hypothetical protein chr7 25843985 25844686 - CDS,promoter,downstream 9 LOC_Os03g44835 expressed protein gene expressed protein chr3 25289003 25294412 - five_prime_UTR,CDS 9 LOC_Os11g47150 OsWAK122 - OsWAK receptor-like protein kinase gene OsWAK122 - OsWAK receptor-like protein kinase chr11 27842362 27846663 + CDS,promoter,downstream 9 LOC_Os02g42430 GEM, putative gene GEM, putative chr2 25517597 25518511 - CDS,promoter 9 LOC_Os12g38170 osmotin, putative, expressed gene osmotin, putative, expressed chr12 23401918 23403054 + CDS,three_prime_UTR 9 LOC_Os08g39240 OsWAK76 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed gene OsWAK76 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed chr8 24777596 24783376 + five_prime_UTR,CDS 9 LOC_Os06g20150 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 11558571 11559930 + five_prime_UTR,promoter 9 LOC_Os12g18820 cytochrome P450, putative gene cytochrome P450, putative chr12 10898216 10904229 - CDS 9 LOC_Os08g42350 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr8 26723184 26726081 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os11g32520 OsGH3.13 - Probable indole-3-acetic acid-amido synthetase gene OsGH3.13 - Probable indole-3-acetic acid-amido synthetase chr11 18722253 18723813 - CDS,promoter 9 LOC_Os09g11010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 6099888 6103613 + CDS 9 LOC_Os06g34280 expressed protein gene expressed protein chr6 19949548 19949769 + CDS,promoter,downstream 9 LOC_Os10g13970 receptor-like kinase, putative, expressed gene receptor-like kinase, putative, expressed chr10 7607657 7611227 + CDS 9 LOC_Os02g14160 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr2 7751283 7753743 + five_prime_UTR,CDS,promoter 9 LOC_Os04g59200 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 35030005 35031637 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g07370 hypothetical protein gene hypothetical protein chr11 3707085 3708963 - CDS,downstream 9 LOC_Os12g34970 csAtPR5, putative gene csAtPR5, putative chr12 21249760 21252428 + CDS 9 LOC_Os07g32070 conserved hypothetical protein gene conserved hypothetical protein chr7 19063667 19064713 + CDS 9 LOC_Os09g24870 expressed protein gene expressed protein chr9 14842938 14846952 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g30280 csAtPR5, putative, expressed gene csAtPR5, putative, expressed chr7 17901647 17903779 + CDS 9 LOC_Os09g33650 expressed protein gene expressed protein chr9 19874298 19875147 + CDS,three_prime_UTR,promoter 9 LOC_Os01g33300 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr1 18351772 18353460 - five_prime_UTR,CDS,downstream 9 LOC_Os02g32660 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed gene 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed chr2 19349880 19361259 - CDS,promoter 9 LOC_Os04g34950 hypothetical protein gene hypothetical protein chr4 21067026 21069995 - CDS 9 LOC_Os08g04670 expressed protein gene expressed protein chr8 2331338 2331913 - CDS,promoter,downstream 9 LOC_Os01g20160 OsHKT1;5 - Na+ transporter, expressed gene OsHKT1;5 - Na+ transporter, expressed chr1 11457931 11462418 - CDS,three_prime_UTR 9 LOC_Os07g37920 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr7 22754055 22756698 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g28990 expressed protein gene expressed protein chr7 17008785 17009273 - CDS,promoter 9 LOC_Os01g12680 C4-dicarboxylate transporter/malic acid transport protein, expressed gene C4-dicarboxylate transporter/malic acid transport protein, expressed chr1 6986901 6993006 + CDS,three_prime_UTR,five_prime_UTR,downstream 9 LOC_Os02g45010 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr2 27259998 27263338 - CDS,three_prime_UTR,downstream 9 LOC_Os01g70730 flowering promoting factor-like 1, putative, expressed gene flowering promoting factor-like 1, putative, expressed chr1 40941161 40942066 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os12g13100 WW domain containing protein, expressed gene WW domain containing protein, expressed chr12 7283319 7284990 + five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os10g30430 heavy metal-associated domain containing protein gene heavy metal-associated domain containing protein chr10 15749761 15750300 + CDS,promoter,downstream 9 LOC_Os04g11130 DEF9 - Defensin and Defensin-like DEFL family, expressed gene DEF9 - Defensin and Defensin-like DEFL family, expressed chr4 6049374 6050292 - CDS,promoter,downstream 9 LOC_Os12g24390 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr12 13911270 13913070 + CDS,promoter,downstream 9 LOC_Os08g33670 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr8 21022831 21026246 - five_prime_UTR,CDS,downstream 9 LOC_Os12g39870 expressed protein gene expressed protein chr12 24608161 24611398 + CDS,promoter,downstream 9 LOC_Os07g40180 hypothetical protein gene hypothetical protein chr7 24102746 24103306 + CDS,promoter,downstream 9 LOC_Os06g13410 OsSCP33 - Putative Serine Carboxypeptidase homologue gene OsSCP33 - Putative Serine Carboxypeptidase homologue chr6 7375287 7375933 - CDS,promoter 9 LOC_Os05g49440 DUF1264 domain containing protein, putative, expressed gene DUF1264 domain containing protein, putative, expressed chr5 28284095 28285394 + CDS,three_prime_UTR 9 LOC_Os10g03510 hypothetical protein gene hypothetical protein chr10 1515394 1515783 + CDS,downstream 9 LOC_Os10g10620 invertase/pectin methylesterase inhibitor family protein, putative, expressed gene invertase/pectin methylesterase inhibitor family protein, putative, expressed chr10 5883080 5883879 - five_prime_UTR,CDS,downstream 9 LOC_Os09g12480 ulp1 protease family, C-terminal catalytic domain containing protein gene ulp1 protease family, C-terminal catalytic domain containing protein chr9 7132650 7144978 - CDS,promoter 9 LOC_Os06g36070 expressed protein gene expressed protein chr6 21088918 21090331 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g44620 hus1-like protein, expressed gene hus1-like protein, expressed chr4 26212630 26219583 - three_prime_UTR,promoter 9 LOC_Os05g11610 expressed protein gene expressed protein chr5 6576079 6576656 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g08680 expressed protein gene expressed protein chr11 4629936 4631120 + five_prime_UTR,CDS,promoter 9 LOC_Os01g45624 oleosin, putative, expressed gene oleosin, putative, expressed chr1 25922410 25923109 + three_prime_UTR,downstream 9 LOC_Os05g09290 hypothetical protein gene hypothetical protein chr5 5190026 5190376 - CDS,promoter,downstream 9 LOC_Os04g31680 hypothetical protein gene hypothetical protein chr4 18806147 18807486 - CDS 9 LOC_Os07g26900 alpha-galactosidase precursor, putative, expressed gene alpha-galactosidase precursor, putative, expressed chr7 15578960 15583483 + CDS 9 LOC_Os04g41640 HEV2 - Hevein family protein precursor, expressed gene HEV2 - Hevein family protein precursor, expressed chr4 24507539 24508188 - three_prime_UTR,downstream 9 LOC_Os01g60960 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr1 35256518 35258405 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g36150 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 21782264 21785354 + CDS 9 LOC_Os02g48030 hypothetical protein gene hypothetical protein chr2 29394455 29395504 - CDS,downstream 9 LOC_Os01g02190 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr1 644574 645723 - CDS,three_prime_UTR 9 LOC_Os06g28670 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr6 16328397 16330466 + CDS,promoter 9 LOC_Os04g35030 CSLH3 - cellulose synthase-like family H, expressed gene CSLH3 - cellulose synthase-like family H, expressed chr4 21116184 21121697 - CDS 9 LOC_Os11g06990 expressed protein gene expressed protein chr11 3468895 3473462 - CDS 9 LOC_Os11g36670 hypothetical protein gene hypothetical protein chr11 21182880 21184201 - CDS,promoter 9 LOC_Os03g39150 protein kinase domain containing protein gene protein kinase domain containing protein chr3 21744559 21745614 + CDS,promoter,downstream 9 LOC_Os03g55760 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr3 31742346 31748159 + five_prime_UTR,CDS,promoter 9 LOC_Os06g14370 caleosin related protein, putative, expressed gene caleosin related protein, putative, expressed chr6 8010836 8013838 - five_prime_UTR,downstream 9 LOC_Os11g33410 hypothetical protein gene hypothetical protein chr11 19305996 19306980 - CDS 9 LOC_Os12g39880 expressed protein gene expressed protein chr12 24612885 24615724 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g69140 regulatory protein, putative, expressed gene regulatory protein, putative, expressed chr1 40191955 40193678 + CDS,downstream 9 LOC_Os03g40720 UDP-glucose 6-dehydrogenase, putative, expressed gene UDP-glucose 6-dehydrogenase, putative, expressed chr3 22639941 22655741 - CDS,three_prime_UTR,promoter 9 LOC_Os04g46760 trehalose phosphatase, putative gene trehalose phosphatase, putative chr4 27541189 27543355 - CDS,downstream 9 LOC_Os07g06175 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 3010473 3013274 + CDS,promoter,downstream 9 LOC_Os12g37350 lipozygenase protein, putative gene lipozygenase protein, putative chr12 22901276 22903277 + CDS,downstream 9 LOC_Os11g25920 transcription factor-related, putative, expressed gene transcription factor-related, putative, expressed chr11 14321466 14326193 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g48130 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr1 27554964 27559637 - CDS,three_prime_UTR,downstream 9 LOC_Os09g04100 expressed protein gene expressed protein chr9 2122334 2123075 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g04810 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr7 2127419 2129050 - five_prime_UTR,CDS,downstream 9 LOC_Os08g38470 OsFBX299 - F-box domain containing protein gene OsFBX299 - F-box domain containing protein chr8 24343991 24345314 + CDS,downstream 9 LOC_Os02g16730 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr2 9551854 9553483 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g04010 ICE-like protease p20 domain containing protein, putative, expressed gene ICE-like protease p20 domain containing protein, putative, expressed chr11 1615649 1617301 - three_prime_UTR 9 LOC_Os07g29970 hypothetical protein gene hypothetical protein chr7 17652011 17652503 + CDS,downstream 9 LOC_Os11g02369 LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 692329 693257 + five_prime_UTR,three_prime_UTR,promoter 9 LOC_Os04g04760 hypothetical protein gene hypothetical protein chr4 2283527 2284544 - CDS,promoter 9 LOC_Os03g59330 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr3 33770380 33774175 + CDS,promoter 9 LOC_Os01g40950 hypothetical protein gene hypothetical protein chr1 23166562 23167281 - CDS,downstream 9 LOC_Os10g36090 LTPL156 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL156 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr10 19228144 19228446 - CDS,promoter,downstream 9 LOC_Os04g13160 OsFBD9 - F-box and FBD domain containing protein, expressed gene OsFBD9 - F-box and FBD domain containing protein, expressed chr4 7255765 7257970 - CDS,three_prime_UTR,promoter 9 LOC_Os07g14080 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr7 8031742 8033578 - CDS,three_prime_UTR 9 LOC_Os08g09010 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5241498 5242660 + five_prime_UTR,CDS,promoter 9 LOC_Os06g34740 unknown gene unknown chr6 20190208 20191869 - CDS,downstream 9 LOC_Os02g14190 spermidine synthase, putative, expressed gene spermidine synthase, putative, expressed chr2 7772398 7776160 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g11130 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr5 6267845 6273013 + CDS 9 LOC_Os11g10430 conserved hypothetical protein gene conserved hypothetical protein chr11 5668692 5672407 - CDS,promoter 9 LOC_Os11g05940 hypothetical protein gene hypothetical protein chr11 2794876 2798125 - CDS,promoter 9 LOC_Os05g38000 ATROPGEF7/ROPGEF7, putative, expressed gene ATROPGEF7/ROPGEF7, putative, expressed chr5 22230938 22234648 + five_prime_UTR,promoter 9 LOC_Os11g41390 hypothetical protein gene hypothetical protein chr11 24372181 24377567 + CDS 9 LOC_Os04g24478 jasmonate-induced protein, putative, expressed gene jasmonate-induced protein, putative, expressed chr4 14031223 14032176 + CDS,promoter 9 LOC_Os02g54050 ethylene-responsive transcription factor, putative, expressed gene ethylene-responsive transcription factor, putative, expressed chr2 33101876 33102544 - CDS,promoter 9 LOC_Os03g49830 expressed protein gene expressed protein chr3 28383129 28385234 + CDS,three_prime_UTR,downstream 9 LOC_Os09g21420 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 12934735 12943506 - CDS,downstream 9 LOC_Os04g31580 OsFBX131 - F-box domain containing protein gene OsFBX131 - F-box domain containing protein chr4 18705260 18706834 + CDS,promoter 9 LOC_Os03g06870 expressed protein gene expressed protein chr3 3475567 3475824 - CDS,downstream 9 LOC_Os01g53090 pathogen-related protein, putative, expressed gene pathogen-related protein, putative, expressed chr1 30511232 30520521 - CDS,downstream 9 LOC_Os07g35710 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr7 21387681 21389284 + five_prime_UTR,CDS,promoter 9 LOC_Os02g40250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 24355225 24363775 + CDS 9 LOC_Os08g36110 ZOS8-06 - C2H2 zinc finger protein, expressed gene ZOS8-06 - C2H2 zinc finger protein, expressed chr8 22752090 22753333 + three_prime_UTR,promoter,downstream 9 LOC_Os11g15310 methyltransferase, putative gene methyltransferase, putative chr11 8648081 8651012 + CDS 9 LOC_Os01g54520 DUF1264 domain containing protein, putative, expressed gene DUF1264 domain containing protein, putative, expressed chr1 31358155 31360965 + CDS,three_prime_UTR,promoter 9 LOC_Os04g56430 cysteine-rich receptor-like protein kinase, putative, expressed gene cysteine-rich receptor-like protein kinase, putative, expressed chr4 33456175 33457245 + five_prime_UTR,promoter 9 LOC_Os12g26410 expressed protein gene expressed protein chr12 15430246 15431777 - CDS,promoter,downstream 9 LOC_Os08g08820 homeobox and START domains containing protein, putative, expressed gene homeobox and START domains containing protein, putative, expressed chr8 5108241 5115784 + CDS 9 LOC_Os01g41860 hypothetical protein gene hypothetical protein chr1 23711261 23712192 - CDS,downstream 9 LOC_Os11g20160 O-methyltransferase, putative, expressed gene O-methyltransferase, putative, expressed chr11 11644431 11646204 - CDS,three_prime_UTR 9 LOC_Os12g16010 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr12 9121521 9122856 - five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g34170 alpha/beta hydrolase fold, putative gene alpha/beta hydrolase fold, putative chr7 20448008 20449351 + CDS,promoter 9 LOC_Os09g31160 glutamate receptor precursor, putative gene glutamate receptor precursor, putative chr9 18739532 18743004 - CDS,promoter,downstream 9 LOC_Os08g35570 expressed protein gene expressed protein chr8 22405690 22406366 + CDS,three_prime_UTR,downstream 9 LOC_Os04g50090 helix-loop-helix DNA-binding protein, putative gene helix-loop-helix DNA-binding protein, putative chr4 29692760 29696165 + CDS,promoter 9 LOC_Os01g56650 hypothetical protein gene hypothetical protein chr1 32681939 32682343 + CDS,downstream 9 LOC_Os07g34070 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr7 20364637 20366842 - CDS,downstream 9 LOC_Os07g06139 hypothetical protein gene hypothetical protein chr7 2991460 2992544 - CDS,promoter,downstream 9 LOC_Os01g47070 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr1 26884440 26885710 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os05g04020 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr5 1804165 1811078 - CDS,downstream 9 LOC_Os05g31730 transporter, monovalent cation:proton antiporter-2 family, putative, expressed gene transporter, monovalent cation:proton antiporter-2 family, putative, expressed chr5 18415009 18418966 - CDS,downstream 9 LOC_Os05g19000 expressed protein gene expressed protein chr5 11025439 11027887 + CDS,three_prime_UTR 9 LOC_Os01g14170 hypothetical protein gene hypothetical protein chr1 7939376 7942760 - CDS,downstream 9 LOC_Os10g11500 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr10 6385725 6386463 + CDS,three_prime_UTR 9 LOC_Os11g04274 hypothetical protein gene hypothetical protein chr11 1770806 1772632 - CDS,downstream 9 LOC_Os01g51570 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 29619909 29621348 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g15210 DUF292 domain containing protein gene DUF292 domain containing protein chr3 8321773 8322624 - CDS,promoter,downstream 9 LOC_Os02g09320 cytochrome P450, putative gene cytochrome P450, putative chr2 4796079 4797934 + CDS 9 LOC_Os02g40550 Lung seven transmembrane receptor domain containing protein, putative, expressed gene Lung seven transmembrane receptor domain containing protein, putative, expressed chr2 24589306 24591099 + CDS,three_prime_UTR,downstream 9 LOC_Os05g12280 clumping factor A precursor, putative, expressed gene clumping factor A precursor, putative, expressed chr5 7049823 7050808 - CDS 9 LOC_Os01g48525 expressed protein gene expressed protein chr1 27825929 27827053 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os02g19680 conserved hypothetical protein gene conserved hypothetical protein chr2 11516541 11518724 - CDS,promoter,downstream 9 LOC_Os04g53540 homeobox and START domains containing protein, putative, expressed gene homeobox and START domains containing protein, putative, expressed chr4 31714613 31722017 - CDS,three_prime_UTR 9 LOC_Os06g02940 expressed protein gene expressed protein chr6 1078926 1079933 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g37600 hypothetical protein gene hypothetical protein chr7 22532647 22533517 + CDS,downstream 9 LOC_Os07g18610 OsFBLD7 - F-box, LRR and FBD domain containing protein, expressed gene OsFBLD7 - F-box, LRR and FBD domain containing protein, expressed chr7 10997049 10998723 + CDS,promoter 9 LOC_Os02g27580 hypothetical protein gene hypothetical protein chr2 16329284 16329888 - CDS,promoter,downstream 9 LOC_Os02g02190 transporter, major facilitator family, putative, expressed gene transporter, major facilitator family, putative, expressed chr2 667194 669053 - CDS,three_prime_UTR 9 LOC_Os08g31870 cell division cycle protein 48, putative, expressed gene cell division cycle protein 48, putative, expressed chr8 19754088 19758089 - CDS,three_prime_UTR,downstream 9 LOC_Os12g09770 O-methyltransferase, putative gene O-methyltransferase, putative chr12 5171106 5174070 + CDS 9 LOC_Os01g38890 hypothetical protein gene hypothetical protein chr1 21820536 21825186 - CDS 9 LOC_Os03g44030 expressed protein gene expressed protein chr3 24750928 24751631 + three_prime_UTR,promoter,downstream 9 LOC_Os04g42950 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr4 25219794 25222549 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g25930 cystathionine gamma-synthase, putative gene cystathionine gamma-synthase, putative chr10 13366902 13368408 + CDS,promoter 9 LOC_Os08g44750 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr8 28116018 28118876 + CDS,three_prime_UTR 9 LOC_Os06g23420 exostosin family domain containing protein, expressed gene exostosin family domain containing protein, expressed chr6 13673055 13675419 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os02g44320 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr2 26808687 26809674 + three_prime_UTR 9 LOC_Os07g06390 expressed protein gene expressed protein chr7 3104285 3108491 - CDS,three_prime_UTR,five_prime_UTR,promoter 9 LOC_Os10g04860 aldehyde oxidase, putative, expressed gene aldehyde oxidase, putative, expressed chr10 2357767 2367709 + CDS 9 LOC_Os09g11780 hypothetical protein gene hypothetical protein chr9 6590145 6590381 + CDS,promoter 9 LOC_Os01g71670 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr1 41532230 41534576 - CDS,downstream 9 LOC_Os08g13040 hypothetical protein gene hypothetical protein chr8 7743382 7743741 - CDS,downstream 9 LOC_Os06g10180 flavin-containing monooxygenase 1, putative gene flavin-containing monooxygenase 1, putative chr6 5212490 5213600 - CDS 9 LOC_Os06g30700 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr6 17796503 17810427 - CDS 9 LOC_Os01g51260 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 29468520 29470462 + CDS,promoter 9 LOC_Os04g47930 aluminum-activated malate transporter, putative, expressed gene aluminum-activated malate transporter, putative, expressed chr4 28314859 28317345 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os10g05750 POEI3 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI3 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2896593 2898171 - five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os11g31820 conserved hypothetical protein gene conserved hypothetical protein chr11 18224412 18235932 - CDS 9 LOC_Os06g33390 avr9/Cf-9 rapidly elicited protein 194, putative, expressed gene avr9/Cf-9 rapidly elicited protein 194, putative, expressed chr6 19444436 19445526 - five_prime_UTR,downstream 9 LOC_Os08g20730 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr8 12454858 12457009 + five_prime_UTR,CDS,promoter 9 LOC_Os08g19694 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr8 11784534 11797472 - five_prime_UTR,downstream 9 LOC_Os01g72510 eukaryotic aspartyl protease domain containing protein, expressed gene eukaryotic aspartyl protease domain containing protein, expressed chr1 42057893 42059541 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g38690 nucleic acid binding protein, putative gene nucleic acid binding protein, putative chr1 21729344 21732906 + CDS,downstream 9 LOC_Os06g51140 ZOS6-11 - C2H2 zinc finger protein, expressed gene ZOS6-11 - C2H2 zinc finger protein, expressed chr6 30934756 30935614 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g40070 NADP-dependent oxidoreductase, putative, expressed gene NADP-dependent oxidoreductase, putative, expressed chr6 23846496 23850045 - five_prime_UTR,downstream 9 LOC_Os01g23580 inorganic H+ pyrophosphatase, putative, expressed gene inorganic H+ pyrophosphatase, putative, expressed chr1 13236222 13245157 + CDS 9 LOC_Os09g18560 hypothetical protein gene hypothetical protein chr9 11373270 11374130 - CDS,promoter 9 LOC_Os08g09590 OsFBL42 - F-box domain and LRR containing protein gene OsFBL42 - F-box domain and LRR containing protein chr8 5549758 5552196 + CDS,downstream 9 LOC_Os11g07911 expressed protein gene expressed protein chr11 4079933 4080633 + three_prime_UTR 9 LOC_Os12g17950 expressed protein gene expressed protein chr12 10317817 10319410 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os04g51000 transcription factor FL, putative, expressed gene transcription factor FL, putative, expressed chr4 29997460 30000724 - five_prime_UTR,CDS,downstream 9 LOC_Os07g41980 C1-like domain containing protein gene C1-like domain containing protein chr7 25130183 25131005 + CDS,downstream 9 LOC_Os04g45420 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 26676356 26686775 - CDS,promoter 9 LOC_Os12g44290 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 27417687 27419435 - CDS,downstream 9 LOC_Os01g60080 monocopper oxidase, putative, expressed gene monocopper oxidase, putative, expressed chr1 34745809 34748471 + CDS,three_prime_UTR,promoter 9 LOC_Os11g43200 tropinone reductase 2, putative gene tropinone reductase 2, putative chr11 25585923 25587497 - CDS,promoter 9 LOC_Os09g25150 cinnamoyl-CoA reductase, putative, expressed gene cinnamoyl-CoA reductase, putative, expressed chr9 15075123 15078325 - CDS,three_prime_UTR,downstream 9 LOC_Os07g44370 dirigent, putative, expressed gene dirigent, putative, expressed chr7 26515302 26516353 + five_prime_UTR,promoter 9 LOC_Os03g53620 late embryogenesis abundant protein D-34, putative, expressed gene late embryogenesis abundant protein D-34, putative, expressed chr3 30735994 30736859 - CDS,three_prime_UTR,promoter 9 LOC_Os10g20990 ribosomal protein S12 containing protein gene ribosomal protein S12 containing protein chr10 10554729 10559060 - CDS 9 LOC_Os11g35440 hypothetical protein gene hypothetical protein chr11 20298930 20300504 - CDS 9 LOC_Os01g52770 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 30360711 30363057 + five_prime_UTR,CDS,promoter 9 LOC_Os06g39860 hypothetical protein gene hypothetical protein chr6 23673240 23673617 - CDS,promoter,downstream 9 LOC_Os05g23900 hypothetical protein gene hypothetical protein chr5 13688568 13689241 - CDS 9 LOC_Os12g13030 osFTL7 FT-Like7 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene osFTL7 FT-Like7 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr12 7232396 7234315 + CDS 9 LOC_Os02g48950 ubiquitin-conjugating enzyme, putative gene ubiquitin-conjugating enzyme, putative chr2 29925758 29928010 - CDS 9 LOC_Os07g05480 photosystem I reaction center subunit, chloroplast precursor, putative, expressed gene photosystem I reaction center subunit, chloroplast precursor, putative, expressed chr7 2545428 2546415 + three_prime_UTR,downstream 9 LOC_Os05g05080 expressed protein gene expressed protein chr5 2470740 2471254 - five_prime_UTR,CDS,downstream 9 LOC_Os08g03410 glutelin, putative, expressed gene glutelin, putative, expressed chr8 1596236 1598570 + CDS,three_prime_UTR,downstream 9 LOC_Os07g10590 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr7 5746395 5748827 - five_prime_UTR,downstream 9 LOC_Os11g09630 OsFBX407 - F-box domain containing protein gene OsFBX407 - F-box domain containing protein chr11 5142996 5145770 - CDS 9 LOC_Os07g09050 exostosin family protein, putative, expressed gene exostosin family protein, putative, expressed chr7 4728467 4732532 + five_prime_UTR,promoter 9 LOC_Os04g38430 nodulin, putative, expressed gene nodulin, putative, expressed chr4 22663819 22666527 + five_prime_UTR,CDS,promoter 9 LOC_Os09g22090 mannose-6-phosphate isomerase, putative, expressed gene mannose-6-phosphate isomerase, putative, expressed chr9 13374696 13380516 - CDS 9 LOC_Os12g36430 expressed protein gene expressed protein chr12 22257689 22261349 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g32220 ZOS3-11 - C2H2 zinc finger protein, expressed gene ZOS3-11 - C2H2 zinc finger protein, expressed chr3 18428893 18430011 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os09g16220 hypothetical protein gene hypothetical protein chr9 9899753 9903720 - CDS,promoter 9 LOC_Os05g06080 E3 ubiquitin-protein ligase SINA-like, putative gene E3 ubiquitin-protein ligase SINA-like, putative chr5 3042134 3043088 + CDS,downstream 9 LOC_Os07g01780 GTPase activating protein, putative, expressed gene GTPase activating protein, putative, expressed chr7 456738 459218 - CDS,promoter 9 LOC_Os09g20200 hypothetical protein gene hypothetical protein chr9 12109092 12110290 - CDS,downstream 9 LOC_Os06g04169 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr6 1735250 1741582 - CDS,three_prime_UTR 9 LOC_Os09g16030 cytokinin-O-glucosyltransferase 1, putative, expressed gene cytokinin-O-glucosyltransferase 1, putative, expressed chr9 9789430 9791206 - CDS,downstream 9 LOC_Os11g37620 hypothetical protein gene hypothetical protein chr11 21737605 21738547 - CDS 9 LOC_Os03g42830 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr3 23868357 23874481 - five_prime_UTR,downstream 9 LOC_Os12g40590 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr12 25082483 25086214 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os11g35860 OsWAK120 - OsWAK receptor-like protein kinase gene OsWAK120 - OsWAK receptor-like protein kinase chr11 20580361 20582361 - CDS,downstream 9 LOC_Os08g32320 hypothetical protein gene hypothetical protein chr8 20015577 20016360 + CDS,downstream 9 LOC_Os02g36110 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 21734435 21736161 + five_prime_UTR,CDS,promoter 9 LOC_Os10g08620 chalcone and stilbene synthases, putative gene chalcone and stilbene synthases, putative chr10 4697455 4699431 + CDS,promoter 9 LOC_Os12g34560 hypothetical protein gene hypothetical protein chr12 20905867 20906261 - CDS,promoter,downstream 9 LOC_Os07g28250 lipase class 3 family protein, putative, expressed gene lipase class 3 family protein, putative, expressed chr7 16502172 16503721 + CDS,promoter,downstream 9 LOC_Os05g29680 hypothetical protein gene hypothetical protein chr5 17094084 17094512 - CDS,promoter,downstream 9 LOC_Os09g25890 trehalose-6-phosphate synthase, putative, expressed gene trehalose-6-phosphate synthase, putative, expressed chr9 15531902 15535139 + five_prime_UTR,CDS,promoter,downstream 9 LOC_Os12g34940 hypothetical protein gene hypothetical protein chr12 21234784 21236856 - CDS,downstream 9 LOC_Os09g36170 hypothetical protein gene hypothetical protein chr9 20843528 20844198 - CDS,promoter,downstream 9 LOC_Os09g39160 thiol protease SEN102 precursor, putative, expressed gene thiol protease SEN102 precursor, putative, expressed chr9 22487765 22489905 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os06g46149 serine/arginine repetitive matrix protein 1, putative, expressed gene serine/arginine repetitive matrix protein 1, putative, expressed chr6 27959871 27970325 + five_prime_UTR,three_prime_UTR,downstream 9 LOC_Os07g14330 conserved hypothetical protein gene conserved hypothetical protein chr7 8178451 8178900 + CDS,promoter,downstream 9 LOC_Os02g45054 ZOS2-15 - C2H2 zinc finger protein, expressed gene ZOS2-15 - C2H2 zinc finger protein, expressed chr2 27310151 27319794 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os07g04960 app1, putative, expressed gene app1, putative, expressed chr7 2183249 2183999 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g56810 cytokinin dehydrogenase precursor, putative, expressed gene cytokinin dehydrogenase precursor, putative, expressed chr1 32787443 32791707 - five_prime_UTR,downstream 9 LOC_Os02g53130 nitrate reductase, putative, expressed gene nitrate reductase, putative, expressed chr2 32507870 32511286 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os11g09230 ankyrin repeat family protein, putative, expressed gene ankyrin repeat family protein, putative, expressed chr11 4941703 4943919 + CDS 9 LOC_Os01g47050 OsFBK1 - F-box domain and kelch repeat containing protein, expressed gene OsFBK1 - F-box domain and kelch repeat containing protein, expressed chr1 26871173 26873989 + CDS,promoter 9 LOC_Os11g43020 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 25460992 25464695 - CDS 9 LOC_Os06g19540 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed gene oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed chr6 11120685 11122674 - CDS,downstream 9 LOC_Os04g14810 3-5 exonuclease domain-containing protein, putative, expressed gene 3-5 exonuclease domain-containing protein, putative, expressed chr4 8315837 8316724 - three_prime_UTR,promoter 9 LOC_Os10g06110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 3109552 3112315 - CDS 9 LOC_Os01g43740 cytochrome P450 72A1, putative, expressed gene cytochrome P450 72A1, putative, expressed chr1 25059720 25062565 + five_prime_UTR,CDS,promoter 9 LOC_Os01g02950 hypothetical protein gene hypothetical protein chr1 1096580 1097942 - CDS 9 LOC_Os04g08510 OsFBX117 - F-box domain containing protein, expressed gene OsFBX117 - F-box domain containing protein, expressed chr4 4593590 4594786 - CDS 9 LOC_Os12g05990 No apical meristem protein, putative, expressed gene No apical meristem protein, putative, expressed chr12 2761324 2762608 + five_prime_UTR,promoter 9 LOC_Os02g18720 hypothetical protein gene hypothetical protein chr2 10922184 10923458 + CDS,promoter 9 LOC_Os10g32890 hypothetical protein gene hypothetical protein chr10 17141661 17142771 - CDS,downstream 9 LOC_Os12g05970 hypothetical protein gene hypothetical protein chr12 2746577 2749107 - CDS,downstream 9 LOC_Os05g35950 conserved hypothetical protein gene conserved hypothetical protein chr5 21243541 21244627 + CDS 9 LOC_Os07g18630 conserved hypothetical protein gene conserved hypothetical protein chr7 11006289 11007036 + CDS,promoter 9 LOC_Os01g05370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 2534825 2539763 - CDS,promoter,downstream 9 LOC_Os05g02200 cysteine-rich repeat secretory protein 55 precursor, putative, expressed gene cysteine-rich repeat secretory protein 55 precursor, putative, expressed chr5 690756 691909 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os08g07250 hypothetical protein gene hypothetical protein chr8 4049010 4049518 + CDS,promoter 9 LOC_Os03g01820 fatty acid hydroxylase, putative, expressed gene fatty acid hydroxylase, putative, expressed chr3 498915 500853 - five_prime_UTR,downstream 9 LOC_Os11g35110 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 20116004 20118068 + CDS 9 LOC_Os01g42790 xylem cysteine proteinase 2 precursor, putative, expressed gene xylem cysteine proteinase 2 precursor, putative, expressed chr1 24350258 24352301 - CDS,three_prime_UTR 9 LOC_Os06g16590 hypothetical protein gene hypothetical protein chr6 9530135 9530413 + CDS,downstream 9 LOC_Os11g07400 expressed protein gene expressed protein chr11 3717802 3719505 - three_prime_UTR 9 LOC_Os03g48750 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr3 27772139 27773149 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os06g02040 late embryogenesis abundant group 1, putative, expressed gene late embryogenesis abundant group 1, putative, expressed chr6 592558 593234 + five_prime_UTR,promoter 9 LOC_Os04g03320 jacalin-like lectin domain containing protein gene jacalin-like lectin domain containing protein chr4 1406657 1407972 + CDS,promoter,downstream 9 LOC_Os09g20284 amine oxidase, flavin-containing, domain containing protein, expressed gene amine oxidase, flavin-containing, domain containing protein, expressed chr9 12165726 12175969 - five_prime_UTR,CDS,downstream 9 LOC_Os10g11730 LTPL88 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL88 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 6500194 6502456 + five_prime_UTR,promoter 9 LOC_Os11g08430 hypothetical protein gene hypothetical protein chr11 4436703 4437254 + CDS,promoter,downstream 9 LOC_Os11g26570 dehydrin, putative, expressed gene dehydrin, putative, expressed chr11 14759638 14761133 - CDS,three_prime_UTR,downstream 9 LOC_Os01g21640 expressed protein gene expressed protein chr1 12125396 12126207 + CDS,promoter,downstream 9 LOC_Os02g40560 hypothetical protein gene hypothetical protein chr2 24591301 24592017 - CDS,promoter 9 LOC_Os10g01660 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr10 434387 437023 - five_prime_UTR,CDS,downstream 9 LOC_Os03g03164 homeobox protein knotted-1, putative, expressed gene homeobox protein knotted-1, putative, expressed chr3 1339050 1344293 + CDS,promoter 9 LOC_Os05g39470 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 23090063 23092861 - CDS,downstream 9 LOC_Os10g03050 leucine-rich repeat receptor protein kinase EXS precursor, putative gene leucine-rich repeat receptor protein kinase EXS precursor, putative chr10 1264262 1265446 - CDS 9 LOC_Os02g13700 hypothetical protein gene hypothetical protein chr2 7348539 7349632 + CDS,promoter,downstream 9 LOC_Os11g10320 expressed protein gene expressed protein chr11 5600995 5603021 + CDS,promoter 9 LOC_Os12g02310 LTPL11 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL11 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr12 731978 733220 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os01g02110 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr1 602643 604643 - five_prime_UTR,CDS,downstream 9 LOC_Os01g63680 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 36935941 36938321 + CDS,three_prime_UTR 9 LOC_Os10g37580 hypothetical protein gene hypothetical protein chr10 20039551 20040801 - CDS,downstream 9 LOC_Os05g05020 expressed protein gene expressed protein chr5 2436899 2437558 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os01g14310 hypothetical protein gene hypothetical protein chr1 8015552 8018035 - CDS 9 LOC_Os02g54870 expressed protein gene expressed protein chr2 33598479 33600133 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os04g57860 endoglucanase precursor, putative, expressed gene endoglucanase precursor, putative, expressed chr4 34265455 34269235 - CDS,three_prime_UTR 9 LOC_Os08g37400 ZF-HD homeobox protein, putative, expressed gene ZF-HD homeobox protein, putative, expressed chr8 23660778 23662835 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os10g17930 OsFBX381 - F-box domain containing protein, expressed gene OsFBX381 - F-box domain containing protein, expressed chr10 8991544 8993267 - five_prime_UTR,CDS,downstream 9 LOC_Os03g44880 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr3 25313778 25315480 + CDS,promoter 9 LOC_Os01g03630 multicopper oxidase domain containing protein, expressed gene multicopper oxidase domain containing protein, expressed chr1 1489473 1491684 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g45260 glycosyl transferase 8 domain containing protein, putative, expressed gene glycosyl transferase 8 domain containing protein, putative, expressed chr7 27005629 27007547 + three_prime_UTR,promoter 9 LOC_Os04g26110 hypothetical protein gene hypothetical protein chr4 15193416 15194881 - CDS,promoter 9 LOC_Os09g18620 serine/threonine-protein kinase, putative, expressed gene serine/threonine-protein kinase, putative, expressed chr9 11410905 11411548 + CDS,promoter 9 LOC_Os08g16260 cytochrome P450 protein, putative, expressed gene cytochrome P450 protein, putative, expressed chr8 9920526 9922228 + CDS,three_prime_UTR 9 LOC_Os07g33060 hypothetical protein gene hypothetical protein chr7 19743060 19745237 - CDS 9 LOC_Os03g27510 OsSCP15 - Putative Serine Carboxypeptidase homologue gene OsSCP15 - Putative Serine Carboxypeptidase homologue chr3 15778758 15783562 - CDS,promoter,downstream 9 LOC_Os02g50740 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr2 30980991 30982534 + CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g08160 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 4278565 4279021 + CDS,downstream 9 LOC_Os11g05490 expressed protein gene expressed protein chr11 2472559 2473369 - CDS,three_prime_UTR 9 LOC_Os05g47950 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr5 27423106 27424949 - five_prime_UTR,CDS,downstream 9 LOC_Os03g20290 aspartic proteinase nepenthesin-1 precursor, putative, expressed gene aspartic proteinase nepenthesin-1 precursor, putative, expressed chr3 11466354 11468028 + five_prime_UTR,CDS,promoter 9 LOC_Os07g37950 expressed protein gene expressed protein chr7 22772765 22774194 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os01g56710 OsFBDUF6 - F-box and DUF domain containing protein gene OsFBDUF6 - F-box and DUF domain containing protein chr1 32721661 32723265 + CDS 9 LOC_Os01g28710 conserved hypothetical protein gene conserved hypothetical protein chr1 16078267 16079033 - CDS,promoter 9 LOC_Os05g05060 expressed protein gene expressed protein chr5 2464293 2465016 - five_prime_UTR,downstream 9 LOC_Os04g20070 tropinone reductase 2, putative, expressed gene tropinone reductase 2, putative, expressed chr4 11171013 11172621 + CDS,three_prime_UTR 9 LOC_Os03g10740 expressed protein gene expressed protein chr3 5480504 5481358 - CDS,three_prime_UTR,promoter 9 LOC_Os03g42850 hypothetical protein gene hypothetical protein chr3 23897030 23898053 + CDS,promoter 9 LOC_Os07g04660 white-brown complex homolog protein 16, putative gene white-brown complex homolog protein 16, putative chr7 2064210 2064704 - CDS,promoter,downstream 9 LOC_Os05g42432 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 24840828 24843823 + CDS,downstream 9 LOC_Os07g43200 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr7 25886513 25893068 + CDS,promoter 9 LOC_Os03g27680 conserved hypothetical protein gene conserved hypothetical protein chr3 15862424 15865835 - CDS 9 LOC_Os02g52830 lipase, putative, expressed gene lipase, putative, expressed chr2 32293905 32298113 - five_prime_UTR,CDS,downstream 9 LOC_Os01g58970 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 34088417 34090357 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os04g21350 flowering promoting factor-like 1, putative, expressed gene flowering promoting factor-like 1, putative, expressed chr4 12053650 12054539 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os03g44050 OsWAK27 - OsWAK receptor-like protein kinase, expressed gene OsWAK27 - OsWAK receptor-like protein kinase, expressed chr3 24757338 24761574 - CDS,promoter,downstream 9 LOC_Os10g12390 expressed protein gene expressed protein chr10 6912500 6913404 + CDS 9 LOC_Os07g49360 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 29560188 29561543 - three_prime_UTR,promoter,downstream 9 LOC_Os05g35789 unknown gene unknown chr5 21171694 21171930 + CDS,promoter,downstream 9 LOC_Os08g09640 OsFBL43 - F-box domain and LRR containing protein gene OsFBL43 - F-box domain and LRR containing protein chr8 5571034 5573387 - CDS,promoter,downstream 9 LOC_Os11g37570 hypothetical protein gene hypothetical protein chr11 21715023 21715427 - CDS,promoter,downstream 9 LOC_Os06g03080 aspartic protease, putative, expressed gene aspartic protease, putative, expressed chr6 1136135 1137971 + CDS,downstream 9 LOC_Os11g26920 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr11 15009123 15012564 - CDS 9 LOC_Os08g07670 conserved hypothetical protein gene conserved hypothetical protein chr8 4292998 4293516 + CDS,promoter 9 LOC_Os02g42970 NAC domain containing protein, putative gene NAC domain containing protein, putative chr2 25853635 25855114 - CDS,downstream 9 LOC_Os06g12840 conserved hypothetical protein gene conserved hypothetical protein chr6 7024604 7026003 - CDS,downstream 9 LOC_Os08g38650 hypothetical protein gene hypothetical protein chr8 24423695 24424991 - CDS 9 LOC_Os05g29710 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr5 17115343 17116728 + five_prime_UTR,promoter,downstream 9 LOC_Os11g10310 receptor-like protein kinase 2 precursor, putative, expressed gene receptor-like protein kinase 2 precursor, putative, expressed chr11 5588195 5598829 - five_prime_UTR,CDS,downstream 9 LOC_Os02g30860 hypothetical protein gene hypothetical protein chr2 18409814 18410331 - CDS,promoter,downstream 9 LOC_Os01g72020 BTBA3 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed gene BTBA3 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed chr1 41740117 41743623 - three_prime_UTR,promoter 9 LOC_Os12g09790 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 5183067 5185309 - five_prime_UTR,CDS,three_prime_UTR 9 LOC_Os03g07620 conserved hypothetical protein gene conserved hypothetical protein chr3 3873149 3873544 - CDS,promoter,downstream 9 LOC_Os02g39380 OsCML17 - Calmodulin-related calcium sensor protein, expressed gene OsCML17 - Calmodulin-related calcium sensor protein, expressed chr2 23760736 23761580 - CDS,three_prime_UTR 9 LOC_Os05g13350 hypothetical protein gene hypothetical protein chr5 7408685 7409050 - CDS,promoter,downstream 9 LOC_Os01g74450 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr1 43114698 43116187 - three_prime_UTR 9 LOC_Os11g44030 expressed protein gene expressed protein chr11 26140680 26144862 + CDS 9 LOC_Os01g58860 auxin efflux carrier component, putative, expressed gene auxin efflux carrier component, putative, expressed chr1 34002620 34005416 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os07g15530 expressed protein gene expressed protein chr7 9002998 9003225 - CDS,promoter,downstream 9 LOC_Os03g51710 homeobox protein knotted-1, putative, expressed gene homeobox protein knotted-1, putative, expressed chr3 29619330 29625789 - five_prime_UTR,CDS,downstream 9 LOC_Os03g14080 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr3 7645584 7649497 + CDS,three_prime_UTR,downstream 9 LOC_Os09g19180 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 11464578 11466183 + CDS,promoter 9 LOC_Os10g04429 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr10 2086401 2090909 + CDS,three_prime_UTR 9 LOC_Os06g19610 oxidoreductase, short chain dehydrogenase/reductase family, putative gene oxidoreductase, short chain dehydrogenase/reductase family, putative chr6 11178550 11180353 - CDS,downstream 9 LOC_Os01g09260 cytokinin dehydrogenase precursor, putative, expressed gene cytokinin dehydrogenase precursor, putative, expressed chr1 4696314 4698792 - CDS,downstream 9 LOC_Os11g30000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 16974047 16983190 + CDS,promoter 9 LOC_Os07g44090 myb-related protein Hv33, putative, expressed gene myb-related protein Hv33, putative, expressed chr7 26354840 26357056 + CDS,three_prime_UTR,promoter 9 LOC_Os12g05260 phytosulfokines precursor, putative, expressed gene phytosulfokines precursor, putative, expressed chr12 2337073 2338172 + five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os07g44060 haloacid dehalogenase-like hydrolase family protein, putative, expressed gene haloacid dehalogenase-like hydrolase family protein, putative, expressed chr7 26326407 26328778 - three_prime_UTR,promoter 9 LOC_Os09g26510 conserved hypothetical protein gene conserved hypothetical protein chr9 16016089 16016752 + CDS,promoter,downstream 9 LOC_Os11g07380 hypothetical protein gene hypothetical protein chr11 3710749 3712469 - CDS,promoter 9 LOC_Os04g27980 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr4 16347873 16349494 - CDS,three_prime_UTR,downstream 9 LOC_Os05g10860 hypothetical protein gene hypothetical protein chr5 6014972 6016997 + CDS,promoter 9 LOC_Os11g08050 conserved hypothetical protein gene conserved hypothetical protein chr11 4180094 4187936 - CDS,promoter 9 LOC_Os01g12940 phosphorylase domain containing protein, putative gene phosphorylase domain containing protein, putative chr1 7184483 7187038 - CDS,promoter,downstream 9 LOC_Os05g11160 expressed protein gene expressed protein chr5 6292146 6293636 - three_prime_UTR,promoter 9 LOC_Os03g06700 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr3 3401617 3403268 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os03g51690 Homeobox domain containing protein, expressed gene Homeobox domain containing protein, expressed chr3 29589317 29599901 - CDS,three_prime_UTR,five_prime_UTR,promoter 9 LOC_Os06g08690 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed gene leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed chr6 4330517 4333807 - CDS,promoter,downstream 9 LOC_Os05g37470 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr5 21864241 21869515 - CDS,three_prime_UTR,five_prime_UTR,downstream 9 LOC_Os04g38360 wound/stress protein, putative, expressed gene wound/stress protein, putative, expressed chr4 22635913 22636610 + five_prime_UTR,CDS,promoter 9 LOC_Os11g34440 phospholipase A2, putative, expressed gene phospholipase A2, putative, expressed chr11 19708573 19710263 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g16839 expansin precursor, putative gene expansin precursor, putative chr2 9589127 9590038 - CDS,downstream 9 LOC_Os12g37290 resistance protein T10rga2-1A, putative gene resistance protein T10rga2-1A, putative chr12 22848639 22852781 - CDS 9 LOC_Os01g06680 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 3146379 3151501 - CDS,downstream 9 LOC_Os07g01410 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 258712 261744 + five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os11g02424 LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 721933 725976 + five_prime_UTR,promoter 9 LOC_Os06g42930 hypothetical protein gene hypothetical protein chr6 25792449 25793069 - CDS,downstream 9 LOC_Os08g01520 cytochrome P450, putative gene cytochrome P450, putative chr8 317965 320012 + CDS,downstream 9 LOC_Os11g09570 hypothetical protein gene hypothetical protein chr11 5117956 5119042 - CDS,promoter,downstream 9 LOC_Os11g02770 conserved hypothetical protein gene conserved hypothetical protein chr11 910478 911491 - CDS,promoter 9 LOC_Os06g40890 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr6 24383028 24385081 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os06g05200 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr6 2334681 2335298 - CDS,promoter,downstream 9 LOC_Os02g42800 expressed protein gene expressed protein chr2 25724653 25726384 + CDS,three_prime_UTR,downstream 9 LOC_Os02g33380 pectinesterase inhibitor domain containing protein, putative, expressed gene pectinesterase inhibitor domain containing protein, putative, expressed chr2 19828413 19829271 + three_prime_UTR,downstream 9 LOC_Os12g10220 expressed protein gene expressed protein chr12 5398038 5400387 + five_prime_UTR,CDS,three_prime_UTR,promoter 9 LOC_Os12g28090 expressed protein gene expressed protein chr12 16579947 16582647 + five_prime_UTR,promoter 9 LOC_Os04g10230 hypothetical protein gene hypothetical protein chr4 5519340 5520362 + CDS 9 LOC_Os12g42220 expressed protein gene expressed protein chr12 26160903 26162376 - five_prime_UTR,CDS,downstream 9 LOC_Os08g44740 hypothetical protein gene hypothetical protein chr8 28110095 28111052 + CDS,promoter 9 LOC_Os03g03100 OsMADS50 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS50 - MADS-box family gene with MIKCc type-box, expressed chr3 1297068 1299382 - CDS,three_prime_UTR 9 LOC_Os11g41500 NC domain-containing protein, putative gene NC domain-containing protein, putative chr11 24426643 24427338 - CDS,promoter 9 LOC_Os05g06250 conserved hypothetical protein gene conserved hypothetical protein chr5 3178852 3180918 + CDS,promoter 9 LOC_Os11g06490 ribosome inactivating protein, putative gene ribosome inactivating protein, putative chr11 3130789 3132533 - CDS 9 LOC_Os02g36220 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr2 21847624 21857723 - five_prime_UTR,promoter,downstream 9 LOC_Os01g68720 keratin, type I cytoskeletal 9, putative, expressed gene keratin, type I cytoskeletal 9, putative, expressed chr1 39917892 39919621 - five_prime_UTR,CDS,three_prime_UTR,promoter,downstream 9 LOC_Os01g49840 hypothetical protein gene hypothetical protein chr1 28621458 28621745 - CDS,downstream 9 LOC_Os03g26430 aldose 1-epimerase, putative, expressed gene aldose 1-epimerase, putative, expressed chr3 15099202 15101081 - five_prime_UTR,CDS,promoter,downstream 9 LOC_Os04g45410 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 26674722 26675620 - CDS,downstream 9 LOC_Os02g52800 OsMan03 - Endo-Beta-Mannanase, expressed gene OsMan03 - Endo-Beta-Mannanase, expressed chr2 32278116 32279746 - CDS,promoter,downstream 9 LOC_Os01g58550 methyladenine glycosylase, putative, expressed gene methyladenine glycosylase, putative, expressed chr1 33836344 33840132 + three_prime_UTR 9 LOC_Os01g52600 hypothetical protein gene hypothetical protein chr1 30236915 30239717 + CDS 9 LOC_Os12g15680 laccase precursor protein, putative, expressed gene laccase precursor protein, putative, expressed chr12 8958185 8961426 + CDS,promoter 9 LOC_Os06g09717 ethylene-responsive transcription factor, putative gene ethylene-responsive transcription factor, putative chr6 4959148 4959771 + CDS,promoter,downstream 9 LOC_Os03g59110 pheophorbide a oxygenase, chloroplast precursor, putative, expressed gene pheophorbide a oxygenase, chloroplast precursor, putative, expressed chr3 33642220 33646625 + CDS 9 LOC_Os02g44090 zinc finger protein, putative, expressed gene zinc finger protein, putative, expressed chr2 26610567 26611477 - five_prime_UTR,three_prime_UTR,promoter,downstream 9 LOC_Os11g06460 ribosome inactivating protein, expressed gene ribosome inactivating protein, expressed chr11 3112202 3114482 - CDS 9 LOC_Os03g06830 hypothetical protein gene hypothetical protein chr3 3461817 3462086 - CDS,downstream 9 LOC_Os05g03130 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed gene OsRCI2-7 - Putative low temperature and salt responsive protein, expressed chr5 1246270 1246994 - five_prime_UTR,CDS,downstream 9 LOC_Os07g05750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr7 2764293 2769655 + three_prime_UTR,promoter,downstream 9 LOC_Os08g13180 MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 7833800 7834954 + CDS,promoter,downstream 9 LOC_Os11g39730 NB-ARC domain containing protein gene NB-ARC domain containing protein chr11 23209449 23212250 - CDS,downstream 9 LOC_Os02g33590 U-box domain-containing protein, putative, expressed gene U-box domain-containing protein, putative, expressed chr2 19975629 19977312 - five_prime_UTR,CDS,downstream 9 LOC_Os02g13190 F-box family protein, putative, expressed gene F-box family protein, putative, expressed chr2 7026617 7028304 - CDS,three_prime_UTR 9 LOC_Os06g04560 kinesin motor domain containing protein, expressed gene kinesin motor domain containing protein, expressed chr6 1972530 1982164 - three_prime_UTR,promoter 9 LOC_Os09g37976 cupin domain containing protein, expressed gene cupin domain containing protein, expressed chr9 21895071 21896501 - CDS,three_prime_UTR,promoter,downstream 9 LOC_Os02g18954 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr2 11071693 11077519 + CDS 9 LOC_Os12g31200 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr12 18754902 18758784 + CDS,promoter,downstream 9 LOC_Os03g47460 ribosome inactivating protein, putative, expressed gene ribosome inactivating protein, putative, expressed chr3 26810499 26815088 + CDS,promoter 9 LOC_Os09g32770 auxin efflux carrier component, putative, expressed gene auxin efflux carrier component, putative, expressed chr9 19549496 19551995 - CDS,downstream 9 LOC_Os06g04920 zinc finger family protein, putative, expressed gene zinc finger family protein, putative, expressed chr6 2161623 2168684 - five_prime_UTR,CDS,three_prime_UTR,downstream 9 LOC_Os06g35590 reticuline oxidase-like protein precursor, putative, expressed gene reticuline oxidase-like protein precursor, putative, expressed chr6 20766518 20768688 - CDS,three_prime_UTR,downstream 9 LOC_Os01g19694 Homeobox domain containing protein, expressed gene Homeobox domain containing protein, expressed chr1 11165924 11173428 + CDS 9 LOC_Os03g27900 ZIM motif family protein, expressed gene ZIM motif family protein, expressed chr3 16023836 16024837 - five_prime_UTR,CDS 9 LOC_Os03g19900 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr3 11182934 11188103 - CDS 9 LOC_Os06g28194 expressed protein gene expressed protein chr6 16010325 16031871 + CDS 9 LOC_Os06g12860 proteins of unknown function domain containing protein, putative gene proteins of unknown function domain containing protein, putative chr6 7036049 7037407 - CDS,promoter,downstream 9 LOC_Os03g55030 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr3 31287382 31290043 - five_prime_UTR,downstream 9 LOC_Os12g33320 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr12 20121388 20130236 - CDS,three_prime_UTR 9 LOC_Os07g31800 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr7 18894761 18903542 - promoter 9 LOC_Os03g20090 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr3 11324797 11327040 - promoter 9 LOC_Os04g45530 hypothetical protein gene hypothetical protein chr4 26752905 26753499 + promoter 9 LOC_Os06g24750 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr6 14535307 14536451 - promoter 9 LOC_Os06g03330 hypothetical protein gene hypothetical protein chr6 1273171 1273693 + promoter 9 LOC_Os07g39650 hypothetical protein gene hypothetical protein chr7 23765657 23766824 + promoter 9 LOC_Os12g12230 DEFL43 - Defensin and Defensin-like DEFL family, expressed gene DEFL43 - Defensin and Defensin-like DEFL family, expressed chr12 6714309 6716067 + promoter 9 LOC_Os05g51780 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr5 29655537 29657054 + promoter 9 LOC_Os12g28790 hypothetical protein gene hypothetical protein chr12 17015285 17016043 + promoter,downstream 9 LOC_Os01g67800 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 39402108 39406442 - promoter 9 LOC_Os01g11010 peptide-N4-asparagine amidase A, putative, expressed gene peptide-N4-asparagine amidase A, putative, expressed chr1 5874786 5876849 - promoter 9 LOC_Os09g07750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 3916742 3922897 + promoter 9 LOC_Os11g45960 hypothetical protein gene hypothetical protein chr11 27335292 27335630 + promoter 9 LOC_Os08g34620 hypothetical protein gene hypothetical protein chr8 21752767 21753689 + promoter 9 LOC_Os02g48050 hypothetical protein gene hypothetical protein chr2 29409281 29410874 + promoter,downstream 9 LOC_Os10g08280 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr10 4494625 4496426 + promoter,downstream 9 LOC_Os06g09688 chaperonin, putative gene chaperonin, putative chr6 4948222 4952398 + promoter 9 LOC_Os03g20370 OsCam1-1 - Calmodulin, expressed gene OsCam1-1 - Calmodulin, expressed chr3 11521392 11523191 + promoter 9 LOC_Os06g37720 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 22337743 22343829 + promoter 9 LOC_Os03g06710 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr3 3406985 3412954 + promoter 9 LOC_Os01g54480 serine/threonine protein kinase, putative, expressed gene serine/threonine protein kinase, putative, expressed chr1 31331820 31336117 - promoter 9 LOC_Os11g40709 unknown gene unknown chr11 23880444 23880711 - promoter 9 LOC_Os04g30970 hypothetical protein gene hypothetical protein chr4 18331079 18331318 - promoter 9 LOC_Os07g48550 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr7 29039441 29041305 - promoter 9 LOC_Os04g32280 hypothetical protein gene hypothetical protein chr4 19174164 19174751 + promoter 9 LOC_Os01g28580 expressed protein gene expressed protein chr1 15991733 15995818 + promoter 9 LOC_Os05g51280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 29351620 29354736 - promoter 9 LOC_Os07g14130 pectinesterase inhibitor domain containing protein gene pectinesterase inhibitor domain containing protein chr7 8062828 8063418 + promoter 9 LOC_Os07g32690 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 19518481 19525310 + promoter,downstream 9 LOC_Os06g42320 hypothetical protein gene hypothetical protein chr6 25418134 25418364 - promoter 9 LOC_Os01g46650 hypothetical protein gene hypothetical protein chr1 26564316 26566205 + promoter 9 LOC_Os07g04990 oxidoreductase, aldo/keto reductase family protein, putative, expressed gene oxidoreductase, aldo/keto reductase family protein, putative, expressed chr7 2192808 2196053 + promoter 9 LOC_Os01g12500 hypothetical protein gene hypothetical protein chr1 6862321 6862747 + promoter 9 LOC_Os11g04710 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr11 2002826 2005979 - promoter 9 LOC_Os09g20980 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr9 12636639 12638372 + promoter 9 LOC_Os06g12610 auxin efflux carrier component, putative, expressed gene auxin efflux carrier component, putative, expressed chr6 6865394 6868522 + promoter 9 LOC_Os12g34820 hypothetical protein gene hypothetical protein chr12 21167251 21167925 - promoter 9 LOC_Os03g42880 nucleotide-binding protein-like, putative, expressed gene nucleotide-binding protein-like, putative, expressed chr3 23905822 23911385 + promoter 9 LOC_Os05g31840 conserved hypothetical protein gene conserved hypothetical protein chr5 18475303 18475848 - promoter 9 LOC_Os02g31920 expressed protein gene expressed protein chr2 18853365 18854236 + promoter 9 LOC_Os09g32370 gp176, putative, expressed gene gp176, putative, expressed chr9 19332536 19334811 + promoter 9 LOC_Os08g04600 hypothetical protein gene hypothetical protein chr8 2293429 2293827 + promoter 9 LOC_Os05g25510 hypothetical protein gene hypothetical protein chr5 14768689 14769024 + promoter,downstream 9 LOC_Os10g39620 ubiquitin family protein, putative, expressed gene ubiquitin family protein, putative, expressed chr10 21097813 21103066 - promoter 9 LOC_Os02g48760 hypothetical protein gene hypothetical protein chr2 29842034 29842519 - promoter,downstream 9 LOC_Os12g13110 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr12 7286621 7289146 - promoter 9 LOC_Os02g56930 expressed protein gene expressed protein chr2 34894536 34895511 + promoter 9 LOC_Os02g34419 unknown gene unknown chr2 20597283 20597556 + promoter 9 LOC_Os03g30420 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 17339225 17341094 - promoter 9 LOC_Os11g32759 expressed protein gene expressed protein chr11 18888464 18891804 - promoter 9 LOC_Os07g05320 expressed protein gene expressed protein chr7 2427211 2428549 + promoter 9 LOC_Os03g53380 hypothetical protein gene hypothetical protein chr3 30618072 30619171 + promoter 9 LOC_Os01g43470 hypothetical protein gene hypothetical protein chr1 24891131 24891718 + promoter 9 LOC_Os12g39050 hypothetical protein gene hypothetical protein chr12 23994523 23995360 + promoter 9 LOC_Os02g08050 hypothetical protein gene hypothetical protein chr2 4239050 4240507 - promoter 9 LOC_Os01g18550 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 10450818 10453410 - promoter 9 LOC_Os12g40210 hypothetical protein gene hypothetical protein chr12 24858494 24858930 + promoter,downstream 9 LOC_Os07g28120 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 16398178 16401836 - promoter 9 LOC_Os12g14750 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 8438380 8439309 - promoter 9 LOC_Os11g32800 hypothetical protein gene hypothetical protein chr11 18909176 18909828 - promoter 9 LOC_Os09g38390 octicosapeptide/Phox/Bem1p, putative, expressed gene octicosapeptide/Phox/Bem1p, putative, expressed chr9 22097982 22100696 + promoter 9 LOC_Os03g36630 expressed protein gene expressed protein chr3 20311821 20316895 + promoter 9 LOC_Os04g23010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 13056610 13057461 + promoter 9 LOC_Os10g22750 expressed protein gene expressed protein chr10 11754746 11755714 + promoter 9 LOC_Os08g14410 hypothetical protein gene hypothetical protein chr8 8645160 8645537 + promoter,downstream 9 LOC_Os04g45610 expressed protein gene expressed protein chr4 26792992 26797045 - promoter 9 LOC_Os03g37260 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr3 20648763 20651804 + promoter 9 LOC_Os04g59300 strictosidine synthase, putative gene strictosidine synthase, putative chr4 35079604 35081141 - promoter 9 LOC_Os09g17900 hypothetical protein gene hypothetical protein chr9 10949430 10951681 - promoter 9 LOC_Os05g11590 hypothetical protein gene hypothetical protein chr5 6561620 6561883 - promoter,downstream 9 LOC_Os09g12160 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 6881103 6881888 - promoter 9 LOC_Os03g27360 RING-H2 finger protein ATL5H precursor, putative gene RING-H2 finger protein ATL5H precursor, putative chr3 15666872 15668125 + promoter 9 LOC_Os12g43110 OsSAUR58 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR58 - Auxin-responsive SAUR gene family member, expressed chr12 26734618 26735291 + promoter 9 LOC_Os03g24110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 13683496 13690446 + promoter 9 LOC_Os12g44020 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr12 27270280 27273546 - promoter 9 LOC_Os04g38280 conserved hypothetical protein gene conserved hypothetical protein chr4 22598293 22599002 + promoter 9 LOC_Os11g35070 hypothetical protein gene hypothetical protein chr11 20093083 20093340 + promoter 9 LOC_Os02g40800 expressed protein gene expressed protein chr2 24718965 24719633 + promoter 9 LOC_Os12g03160 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 1202491 1205222 + promoter 9 LOC_Os08g40380 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr8 25561729 25562727 - promoter,downstream 9 LOC_Os02g32950 RCN2 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed gene RCN2 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed chr2 19561764 19563100 - promoter 9 LOC_Os11g24860 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 13707691 13710996 + promoter 9 LOC_Os09g38010 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr9 21907156 21909734 + promoter 9 LOC_Os10g20794 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 10476433 10479734 + promoter 9 LOC_Os04g22400 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 12676196 12682211 + promoter 9 LOC_Os04g34750 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 20880819 20881803 - promoter 9 LOC_Os10g32290 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr10 16874079 16876828 + promoter 9 LOC_Os05g02550 F-box domain containing protein gene F-box domain containing protein chr5 885018 885986 - promoter,downstream 9 LOC_Os03g60570 ZOS3-22 - C2H2 zinc finger protein, expressed gene ZOS3-22 - C2H2 zinc finger protein, expressed chr3 34420569 34421483 + promoter 9 LOC_Os08g31960 hypothetical protein gene hypothetical protein chr8 19820668 19823675 + promoter 9 LOC_Os01g66510 MLO domain containing protein, putative, expressed gene MLO domain containing protein, putative, expressed chr1 38626703 38631437 + promoter 9 LOC_Os09g12050 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 6802261 6805757 + promoter 9 LOC_Os03g54040 ribosomal protein L6, putative, expressed gene ribosomal protein L6, putative, expressed chr3 30973926 30977513 + promoter 9 LOC_Os07g01450 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed gene DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed chr7 291640 293566 - promoter 9 LOC_Os04g09420 hypothetical protein gene hypothetical protein chr4 5030017 5030501 - promoter 9 LOC_Os02g25230 expressed protein gene expressed protein chr2 14675099 14678938 + promoter 9 LOC_Os05g23389 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 13306043 13306244 - promoter 9 LOC_Os02g01090 ZOS2-01 - C2H2 zinc finger protein gene ZOS2-01 - C2H2 zinc finger protein chr2 48497 48880 - promoter,downstream 9 LOC_Os07g40860 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 24471441 24472585 - promoter 9 LOC_Os09g10860 hypothetical protein gene hypothetical protein chr9 5942545 5942847 - promoter 9 LOC_Os07g37156 expressed protein gene expressed protein chr7 22255285 22257460 - promoter,downstream 9 LOC_Os08g39530 hypothetical protein gene hypothetical protein chr8 25003226 25003441 - promoter 9 LOC_Os01g65310 DUF803 domain containing, putative, expressed gene DUF803 domain containing, putative, expressed chr1 37886562 37889476 + promoter 9 LOC_Os11g04320 phosphoglycerate mutase, putative, expressed gene phosphoglycerate mutase, putative, expressed chr11 1797781 1799337 - promoter 9 LOC_Os12g39890 expressed protein gene expressed protein chr12 24616310 24619047 + promoter 9 LOC_Os06g51029 OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed gene OsFtsH1 FtsH protease, homologue of AtFtsH1/5, expressed chr6 30869319 30876995 - promoter,downstream 9 LOC_Os08g04220 hypothetical protein gene hypothetical protein chr8 2056931 2057757 + promoter,downstream 9 LOC_Os11g37120 nucleolar protein 5, putative gene nucleolar protein 5, putative chr11 21446783 21449854 - promoter 9 LOC_Os04g20700 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 11585458 11587640 - promoter 9 LOC_Os03g29000 hypothetical protein gene hypothetical protein chr3 16459411 16459743 - promoter 9 LOC_Os03g45140 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr3 25481165 25487277 - promoter 9 LOC_Os08g31280 DC1, putative, expressed gene DC1, putative, expressed chr8 19337759 19338682 - promoter 9 LOC_Os06g23950 OsMADS59 - MADS-box family gene with MIKCc type-box gene OsMADS59 - MADS-box family gene with MIKCc type-box chr6 13995415 13996320 + promoter 9 LOC_Os02g37170 conserved hypothetical protein gene conserved hypothetical protein chr2 22465807 22466241 - promoter,downstream 9 LOC_Os05g20380 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 11949684 11950969 + promoter 9 LOC_Os06g04950 early nodulin 93 ENOD93 protein, putative, expressed gene early nodulin 93 ENOD93 protein, putative, expressed chr6 2179199 2180117 - promoter 9 LOC_Os12g43450 thaumatin family domain containing protein, expressed gene thaumatin family domain containing protein, expressed chr12 26926886 26927804 + promoter 9 LOC_Os01g66544 hypothetical protein gene hypothetical protein chr1 38641401 38644665 - promoter 9 LOC_Os06g23920 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 13974663 13977463 + promoter 9 LOC_Os05g36110 protein of unknown function DUF502 domain containing protein, expressed gene protein of unknown function DUF502 domain containing protein, expressed chr5 21347444 21351792 + promoter 9 LOC_Os03g55530 HLS, putative, expressed gene HLS, putative, expressed chr3 31590035 31592686 + promoter 9 LOC_Os03g05510 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr3 2725692 2726555 - promoter,downstream 9 LOC_Os04g54900 bHLH family protein, putative, expressed gene bHLH family protein, putative, expressed chr4 32472642 32473079 - promoter,downstream 9 LOC_Os01g39170 hypothetical protein gene hypothetical protein chr1 22039586 22040181 + promoter,downstream 9 LOC_Os10g29390 expressed protein gene expressed protein chr10 15200305 15201654 + promoter 9 LOC_Os04g33320 expressed protein gene expressed protein chr4 19987034 19989491 - promoter 9 LOC_Os07g36544 serine/threonine-protein kinase receptor precursor, putative, expressed gene serine/threonine-protein kinase receptor precursor, putative, expressed chr7 21845333 21850304 - promoter 9 LOC_Os02g38508 hypothetical protein gene hypothetical protein chr2 23281857 23282873 + promoter 9 LOC_Os12g38560 expressed protein gene expressed protein chr12 23640982 23643848 + promoter 9 LOC_Os06g03110 hypothetical protein gene hypothetical protein chr6 1144639 1145184 + promoter,downstream 9 LOC_Os04g43690 DUF647 domain containing protein, putative, expressed gene DUF647 domain containing protein, putative, expressed chr4 25670520 25674901 - promoter 9 LOC_Os12g39060 hypothetical protein gene hypothetical protein chr12 23995614 23995970 + promoter 9 LOC_Os07g04800 hypothetical protein gene hypothetical protein chr7 2125491 2126000 - promoter 9 LOC_Os07g22520 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 12666980 12669289 - promoter 9 LOC_Os11g42690 hypothetical protein gene hypothetical protein chr11 25245212 25245445 - promoter 9 LOC_Os10g33470 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 17554385 17557462 + promoter 9 LOC_Os03g02920 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 1171248 1175256 - promoter 9 LOC_Os08g01130 flap endonuclease, putative, expressed gene flap endonuclease, putative, expressed chr8 86245 90948 - promoter 9 LOC_Os08g26700 expressed protein gene expressed protein chr8 16234748 16237548 - promoter 9 LOC_Os07g18600 OsFBL37 - F-box domain and LRR containing protein gene OsFBL37 - F-box domain and LRR containing protein chr7 10992125 10993280 - promoter 9 LOC_Os07g05340 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 2440937 2441861 + promoter 9 LOC_Os02g18760 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 10934277 10938654 - promoter 9 LOC_Os04g55110 expressed protein gene expressed protein chr4 32584445 32587209 + promoter 9 LOC_Os08g42460 hypothetical protein gene hypothetical protein chr8 26827046 26827811 + promoter,downstream 9 LOC_Os04g46720 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 27513992 27514504 - promoter 9 LOC_Os02g33900 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 20197065 20199076 - promoter 9 LOC_Os03g27910 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr3 16025352 16030794 + promoter 9 LOC_Os11g37710 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 21823865 21828664 + promoter 9 LOC_Os06g30740 hypothetical protein gene hypothetical protein chr6 17831640 17832833 - promoter 9 LOC_Os05g37010 hypothetical protein gene hypothetical protein chr5 21567841 21568321 + promoter,downstream 9 LOC_Os06g02000 adenylate kinase, putative, expressed gene adenylate kinase, putative, expressed chr6 563535 566686 + promoter 9 LOC_Os05g04780 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 2267539 2269482 + promoter,downstream 9 LOC_Os08g37650 expressed protein gene expressed protein chr8 23847647 23850206 - promoter 9 LOC_Os04g43560 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr4 25588204 25591106 + promoter 9 LOC_Os06g23350 late embryogenesis abundant protein D-34, putative, expressed gene late embryogenesis abundant protein D-34, putative, expressed chr6 13629102 13630416 + promoter 9 LOC_Os08g04320 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 2117517 2120555 - promoter 9 LOC_Os03g27570 conserved hypothetical protein gene conserved hypothetical protein chr3 15808886 15809176 - promoter 9 LOC_Os02g51560 hypothetical protein gene hypothetical protein chr2 31573715 31574042 + promoter 9 LOC_Os01g68750 adaptin, putative, expressed gene adaptin, putative, expressed chr1 39930222 39937124 - promoter 9 LOC_Os07g37550 chlorophyll A-B binding protein, putative, expressed gene chlorophyll A-B binding protein, putative, expressed chr7 22486428 22487773 + promoter 9 LOC_Os06g47730 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 28880110 28886003 + promoter 9 LOC_Os03g17790 OsRCI2-5 - Putative low temperature and salt responsive protein, expressed gene OsRCI2-5 - Putative low temperature and salt responsive protein, expressed chr3 9898694 9899336 - promoter 9 LOC_Os01g07470 hypothetical protein gene hypothetical protein chr1 3539841 3540272 + promoter,downstream 9 LOC_Os07g10040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 5353575 5354756 - promoter 9 LOC_Os05g04215 expressed protein gene expressed protein chr5 1910023 1911346 + promoter 9 LOC_Os05g11180 hypothetical protein gene hypothetical protein chr5 6312925 6314501 + promoter 9 LOC_Os02g34220 hypothetical protein gene hypothetical protein chr2 20464494 20464898 - promoter 9 LOC_Os03g28100 conserved hypothetical protein gene conserved hypothetical protein chr3 16153132 16154527 - promoter 9 LOC_Os08g13219 conserved hypothetical protein gene conserved hypothetical protein chr8 7860055 7860725 + promoter 9 LOC_Os01g08720 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 4356724 4360055 + promoter 9 LOC_Os11g08410 GATA zinc finger domain containing protein gene GATA zinc finger domain containing protein chr11 4428678 4429973 - promoter 9 LOC_Os04g41790 hypothetical protein gene hypothetical protein chr4 24574486 24574979 - promoter 9 LOC_Os08g41370 amino acid permease family protein, putative gene amino acid permease family protein, putative chr8 26129857 26130435 + promoter 9 LOC_Os08g07180 cytokinin-O-glucosyltransferase 2, putative gene cytokinin-O-glucosyltransferase 2, putative chr8 4013118 4013651 + promoter 9 LOC_Os03g52900 conserved hypothetical protein gene conserved hypothetical protein chr3 30327623 30332199 + promoter 9 LOC_Os01g16850 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 9612630 9624233 - promoter 9 LOC_Os05g47730 LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL153 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr5 27283071 27283649 + promoter 9 LOC_Os04g44590 expressed protein gene expressed protein chr4 26202417 26206687 + promoter,downstream 9 LOC_Os02g48964 WD-40 repeat family protein, putative, expressed gene WD-40 repeat family protein, putative, expressed chr2 29928500 29935779 - promoter 9 LOC_Os04g58410 smr domain containing protein, expressed gene smr domain containing protein, expressed chr4 34566390 34570971 + promoter 9 LOC_Os07g37830 peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed gene peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed chr7 22687907 22693499 + promoter,downstream 9 LOC_Os07g05190 leucine-rich repeat family protein, putative, expressed gene leucine-rich repeat family protein, putative, expressed chr7 2312397 2318010 - promoter 9 LOC_Os01g66680 S-domain receptor-like protein kinase, putative, expressed gene S-domain receptor-like protein kinase, putative, expressed chr1 38728771 38733981 + promoter 9 LOC_Os04g54080 serine/threonine-protein kinase receptor precursor, putative, expressed gene serine/threonine-protein kinase receptor precursor, putative, expressed chr4 32043967 32048532 - promoter,downstream 9 LOC_Os11g34450 14-3-3 protein, putative, expressed gene 14-3-3 protein, putative, expressed chr11 19712327 19715505 + promoter 9 LOC_Os03g10220 methyladenine glycosylase, putative gene methyladenine glycosylase, putative chr3 5199523 5205413 - promoter 9 LOC_Os07g38870 hypothetical protein gene hypothetical protein chr7 23321251 23322051 - promoter 9 LOC_Os04g45600 NDH-M H PLASTOQUINONE DEHY, putative, expressed gene NDH-M H PLASTOQUINONE DEHY, putative, expressed chr4 26792277 26793663 + promoter 9 LOC_Os01g69150 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 40195622 40196155 - promoter 9 LOC_Os10g24020 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr10 12236737 12240424 - promoter 9 LOC_Os11g19180 hypothetical protein gene hypothetical protein chr11 10950376 10950597 + promoter,downstream 9 LOC_Os11g05350 conserved hypothetical protein gene conserved hypothetical protein chr11 2371868 2372341 - promoter,downstream 9 LOC_Os11g27500 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 15359002 15359993 - promoter 9 LOC_Os07g13249 unknown gene unknown chr7 7596790 7597089 + promoter 9 LOC_Os06g16110 conserved hypothetical protein gene conserved hypothetical protein chr6 9174705 9175184 - promoter 9 LOC_Os01g34510 hypothetical protein gene hypothetical protein chr1 19024974 19026625 - promoter 9 LOC_Os04g46820 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr4 27558202 27558597 + promoter,downstream 9 LOC_Os04g51900 expressed protein gene expressed protein chr4 30605950 30613049 + promoter 9 LOC_Os10g02700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 1056444 1058621 + promoter 9 LOC_Os08g34410 conserved hypothetical protein gene conserved hypothetical protein chr8 21601098 21601865 - promoter 9 LOC_Os03g19190 TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed gene TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed chr3 10751510 10758847 + promoter 9 LOC_Os07g04600 hypothetical protein gene hypothetical protein chr7 2045558 2048191 - promoter,downstream 9 LOC_Os08g32310 expressed protein gene expressed protein chr8 20010633 20012864 + promoter 9 LOC_Os06g08210 hypothetical protein gene hypothetical protein chr6 3976892 3977242 - promoter,downstream 9 LOC_Os08g17980 photosystem II P680 chlorophyll A apoprotein, putative gene photosystem II P680 chlorophyll A apoprotein, putative chr8 11021075 11021686 - promoter 9 LOC_Os08g15730 hypothetical protein gene hypothetical protein chr8 9546405 9546614 + promoter 9 LOC_Os01g38670 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr1 21718816 21721096 + promoter 9 LOC_Os02g39510 hypothetical protein gene hypothetical protein chr2 23839940 23840735 + promoter,downstream 9 LOC_Os07g30530 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 18060427 18064215 + promoter 9 LOC_Os08g27500 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 16780668 16783097 - promoter 9 LOC_Os05g51420 hypersensitive-induced response protein, putative, expressed gene hypersensitive-induced response protein, putative, expressed chr5 29424082 29429531 - promoter 9 LOC_Os06g39970 CESA11 - cellulose synthase gene CESA11 - cellulose synthase chr6 23776682 23779891 + promoter 9 LOC_Os02g56590 hypothetical protein gene hypothetical protein chr2 34661647 34664054 - promoter 9 LOC_Os01g45670 expressed protein gene expressed protein chr1 25932572 25933843 - promoter,downstream 9 LOC_Os10g10724 hypothetical protein gene hypothetical protein chr10 5951549 5951755 - promoter 9 LOC_Os09g27400 hypothetical protein gene hypothetical protein chr9 16647821 16649401 - promoter 9 LOC_Os02g07030 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr2 3594226 3596591 + promoter,downstream 9 LOC_Os11g11480 hypothetical protein gene hypothetical protein chr11 6372899 6373613 + promoter 9 LOC_Os06g37190 conserved hypothetical protein gene conserved hypothetical protein chr6 21975117 21975752 + promoter 9 LOC_Os08g36120 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 22758413 22759697 + promoter 9 LOC_Os10g29502 expressed protein gene expressed protein chr10 15255442 15259105 + promoter 9 LOC_Os02g45020 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 27278372 27281410 - promoter 9 LOC_Os03g50610 hypothetical protein gene hypothetical protein chr3 28893077 28893409 + promoter 9 LOC_Os01g03740 nuclease PA3, putative, expressed gene nuclease PA3, putative, expressed chr1 1561612 1565554 - promoter 9 LOC_Os06g34290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 19951463 19953431 - promoter 9 LOC_Os06g02010 hypothetical protein gene hypothetical protein chr6 572964 573323 - promoter 9 LOC_Os07g47810 hypothetical protein gene hypothetical protein chr7 28548785 28550327 - promoter 9 LOC_Os03g50320 phosphatidylinositol 4-kinase PI4K, putative, expressed gene phosphatidylinositol 4-kinase PI4K, putative, expressed chr3 28683369 28690988 - promoter 9 LOC_Os06g42670 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 25663338 25664677 - promoter,downstream 9 LOC_Os01g09780 unknown gene unknown chr1 5045031 5045820 - promoter 9 LOC_Os04g11140 hypothetical protein gene hypothetical protein chr4 6054957 6055345 - promoter 9 LOC_Os10g08990 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr10 4877316 4880611 - promoter 9 LOC_Os02g38090 AP2 domain containing protein gene AP2 domain containing protein chr2 23018928 23019965 + promoter,downstream 9 LOC_Os01g14710 conserved hypothetical protein gene conserved hypothetical protein chr1 8231933 8232871 + promoter 9 LOC_Os08g13230 hypothetical protein gene hypothetical protein chr8 7863293 7863769 - promoter 9 LOC_Os02g01100 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr2 50256 55886 - promoter 9 LOC_Os11g05450 hypothetical protein gene hypothetical protein chr11 2444095 2444523 + promoter,downstream 9 LOC_Os11g03180 hypothetical protein gene hypothetical protein chr11 1153273 1155157 - promoter 9 LOC_Os02g48060 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr2 29415532 29417120 + promoter 9 LOC_Os03g05600 expressed protein gene expressed protein chr3 2801867 2802279 + promoter 9 LOC_Os03g24630 hypothetical protein gene hypothetical protein chr3 14025537 14027939 - promoter 9 LOC_Os06g41840 reductase, putative, expressed gene reductase, putative, expressed chr6 25085978 25089188 - promoter 9 LOC_Os09g37550 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 21649574 21650249 - promoter 9 LOC_Os01g54450 DUF584 domain containing protein, putative, expressed gene DUF584 domain containing protein, putative, expressed chr1 31323428 31323973 - promoter,downstream 9 LOC_Os07g46500 ankyrin repeat domain containing protein, putative, expressed gene ankyrin repeat domain containing protein, putative, expressed chr7 27773795 27776992 - promoter,downstream 9 LOC_Os05g12800 hypothetical protein gene hypothetical protein chr5 7341045 7341311 - promoter 9 LOC_Os12g24640 hypothetical protein gene hypothetical protein chr12 14103927 14104957 - promoter 9 LOC_Os08g35780 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 22567534 22568172 + promoter 9 LOC_Os12g44300 CHX28, putative, expressed gene CHX28, putative, expressed chr12 27428036 27430784 + promoter 9 LOC_Os04g20550 hypothetical protein gene hypothetical protein chr4 11464653 11465205 - promoter 9 LOC_Os02g13720 hypothetical protein gene hypothetical protein chr2 7381950 7382180 + promoter 9 LOC_Os07g02550 conserved hypothetical protein gene conserved hypothetical protein chr7 917399 918310 - promoter 9 LOC_Os10g05150 KAZ2 - Kazal-type serine protease inhibitor precursor, putative gene KAZ2 - Kazal-type serine protease inhibitor precursor, putative chr10 2509956 2510171 + promoter 9 LOC_Os07g14650 expressed protein gene expressed protein chr7 8351089 8353960 + promoter 9 LOC_Os03g40500 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 22512141 22514480 - promoter 9 LOC_Os06g51070 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr6 30892479 30893525 - promoter 9 LOC_Os05g06560 conserved hypothetical protein gene conserved hypothetical protein chr5 3382707 3384250 + promoter 9 LOC_Os07g39030 hypothetical protein gene hypothetical protein chr7 23400012 23400854 - promoter 9 LOC_Os10g34694 hypothetical protein gene hypothetical protein chr10 18428153 18429100 - promoter 9 LOC_Os02g45110 MT-A70 domain containing protein, expressed gene MT-A70 domain containing protein, expressed chr2 27354548 27359931 + promoter 9 LOC_Os09g25200 protein binding protein, putative gene protein binding protein, putative chr9 15093395 15096843 + promoter 9 LOC_Os04g53300 polyphenol oxidase, putative, expressed gene polyphenol oxidase, putative, expressed chr4 31563995 31567166 + promoter 9 LOC_Os08g43630 expressed protein gene expressed protein chr8 27583385 27584039 + promoter,downstream 9 LOC_Os10g31790 ubiquitin family protein, putative, expressed gene ubiquitin family protein, putative, expressed chr10 16594587 16602237 - promoter 9 LOC_Os10g34902 RIPER9 - Ripening-related family protein precursor, putative gene RIPER9 - Ripening-related family protein precursor, putative chr10 18559873 18560523 - promoter,downstream 9 LOC_Os11g10920 carboxyl-terminal proteinase, putative, expressed gene carboxyl-terminal proteinase, putative, expressed chr11 6026294 6030193 - promoter,downstream 9 LOC_Os05g38430 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 22476328 22479681 + promoter 9 LOC_Os09g34330 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr9 20268382 20269236 - promoter 9 LOC_Os01g53280 50S ribosomal protein L20, putative, expressed gene 50S ribosomal protein L20, putative, expressed chr1 30607319 30610840 + promoter 9 LOC_Os03g42654 conserved hypothetical protein gene conserved hypothetical protein chr3 23752878 23753372 + promoter 9 LOC_Os05g44800 expressed protein gene expressed protein chr5 25987294 25990123 + promoter 9 LOC_Os01g62180 conserved hypothetical protein gene conserved hypothetical protein chr1 35995016 35995936 - promoter 9 LOC_Os04g46260 hypothetical protein gene hypothetical protein chr4 27231042 27231404 + promoter 9 LOC_Os04g58550 acyl-CoA-binding domain-containing protein 6, putative, expressed gene acyl-CoA-binding domain-containing protein 6, putative, expressed chr4 34625370 34628418 - promoter 9 LOC_Os03g39655 expressed protein gene expressed protein chr3 22052334 22054938 - promoter 9 LOC_Os01g08390 hypothetical protein gene hypothetical protein chr1 4115451 4115943 + promoter 9 LOC_Os12g15270 expressed protein gene expressed protein chr12 8708198 8708857 - promoter 9 LOC_Os07g43970 calmodulin-binding protein, putative, expressed gene calmodulin-binding protein, putative, expressed chr7 26286980 26290084 + promoter 9 LOC_Os03g04220 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr3 1937198 1938687 - promoter 9 LOC_Os02g51939 unknown gene unknown chr2 31804623 31805352 - promoter 9 LOC_Os07g38720 hypothetical protein gene hypothetical protein chr7 23234656 23235201 - promoter 9 LOC_Os04g54740 expressed protein gene expressed protein chr4 32367291 32371233 + promoter 9 LOC_Os04g29890 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 17647393 17651579 + promoter 9 LOC_Os01g64110 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr1 37237858 37239735 + promoter 9 LOC_Os07g06820 serine/threonine-protein kinase RIO-like, putative, expressed gene serine/threonine-protein kinase RIO-like, putative, expressed chr7 3322740 3328956 + promoter 9 LOC_Os07g04790 OsFBX215 - F-box domain containing protein gene OsFBX215 - F-box domain containing protein chr7 2123809 2124585 - promoter 9 LOC_Os05g26080 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 15112391 15113138 + promoter 9 LOC_Os09g30462 expressed protein gene expressed protein chr9 18563833 18564736 + promoter 9 LOC_Os01g21680 hypothetical protein gene hypothetical protein chr1 12162744 12163054 - promoter 9 LOC_Os11g17450 hypothetical protein gene hypothetical protein chr11 9724008 9724229 - promoter 9 LOC_Os11g05510 carbonic anhydrase family protein, putative gene carbonic anhydrase family protein, putative chr11 2484109 2484526 + promoter 9 LOC_Os06g46060 expressed protein gene expressed protein chr6 27922526 27925282 - promoter 9 LOC_Os08g41570 hypothetical protein gene hypothetical protein chr8 26257137 26260191 + promoter 9 LOC_Os05g35800 conserved hypothetical protein gene conserved hypothetical protein chr5 21178219 21179058 + promoter 9 LOC_Os03g46940 expressed protein gene expressed protein chr3 26536310 26536540 - promoter 9 LOC_Os08g23470 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr8 14207177 14210604 - promoter 9 LOC_Os07g04620 hypothetical protein gene hypothetical protein chr7 2051409 2052095 - promoter,downstream 9 LOC_Os01g62450 conserved hypothetical protein gene conserved hypothetical protein chr1 36153438 36153649 + promoter,downstream 9 LOC_Os09g26520 hypothetical protein gene hypothetical protein chr9 16022741 16027615 + promoter 9 LOC_Os05g49350 DUF1645 domain containing protein, putative, expressed gene DUF1645 domain containing protein, putative, expressed chr5 28244409 28245433 + promoter 9 LOC_Os07g36820 uncharacterized Cys-rich domain containing protein, putative, expressed gene uncharacterized Cys-rich domain containing protein, putative, expressed chr7 22055418 22058759 - promoter 9 LOC_Os04g35350 expressed protein gene expressed protein chr4 21321766 21326752 + promoter 9 LOC_Os08g13050 hypothetical protein gene hypothetical protein chr8 7745109 7745868 - promoter 9 LOC_Os09g28354 CPuORF39 - conserved peptide uORF-containing transcript, expressed gene CPuORF39 - conserved peptide uORF-containing transcript, expressed chr9 17220425 17227960 + promoter 9 LOC_Os06g28390 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 16149734 16156327 + promoter 9 LOC_Os05g05000 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 2423878 2429976 + promoter 9 LOC_Os03g55770 expressed protein gene expressed protein chr3 31748885 31749139 + promoter 9 LOC_Os07g04320 hypothetical protein gene hypothetical protein chr7 1905334 1905741 - promoter 9 LOC_Os08g44190 ZOS8-13 - C2H2 zinc finger protein, expressed gene ZOS8-13 - C2H2 zinc finger protein, expressed chr8 27815526 27816248 - promoter,downstream 9 LOC_Os06g04320 hypothetical protein gene hypothetical protein chr6 1832130 1837026 + promoter 9 LOC_Os10g22850 hypothetical protein gene hypothetical protein chr10 11805415 11805936 + promoter 9 LOC_Os07g05350 hypothetical protein gene hypothetical protein chr7 2446879 2447957 - promoter,downstream 9 LOC_Os02g34150 hypothetical protein gene hypothetical protein chr2 20416359 20418176 - promoter 9 LOC_Os04g33040 alpha-amylase precursor, putative, expressed gene alpha-amylase precursor, putative, expressed chr4 19834164 19837592 + promoter 9 LOC_Os07g32719 unknown gene unknown chr7 19534560 19535148 - promoter 9 LOC_Os05g43880 gibberellin 2-beta-dioxygenase, putative gene gibberellin 2-beta-dioxygenase, putative chr5 25452474 25453625 - promoter 9 LOC_Os12g42620 hypothetical protein gene hypothetical protein chr12 26456780 26457028 - promoter,downstream 9 LOC_Os12g40310 OsFBX458 - F-box domain containing protein gene OsFBX458 - F-box domain containing protein chr12 24928403 24930608 + promoter 9 LOC_Os06g09350 expressed protein gene expressed protein chr6 4702900 4703883 - promoter 9 LOC_Os03g06670 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed gene Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed chr3 3370370 3371406 + promoter 9 LOC_Os05g45470 hypothetical protein gene hypothetical protein chr5 26311977 26313230 + promoter,downstream 9 LOC_Os11g25910 hypothetical protein gene hypothetical protein chr11 14319119 14319731 + promoter,downstream 9 LOC_Os09g38620 NADPH reductase, putative, expressed gene NADPH reductase, putative, expressed chr9 22211909 22217771 - promoter 9 LOC_Os02g04010 cyclin-T1-1, putative, expressed gene cyclin-T1-1, putative, expressed chr2 1733994 1737711 - promoter 9 LOC_Os03g33240 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 19016136 19018903 + promoter 9 LOC_Os12g27270 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 16004027 16014603 - promoter 9 LOC_Os11g39810 hypothetical protein gene hypothetical protein chr11 23265231 23268689 + promoter 9 LOC_Os07g01190 hypothetical protein gene hypothetical protein chr7 112407 113323 - promoter 9 LOC_Os08g04550 hypothetical protein gene hypothetical protein chr8 2264994 2265812 + promoter,downstream 9 LOC_Os05g28360 hypothetical protein gene hypothetical protein chr5 16559426 16559866 + promoter 9 LOC_Os01g40890 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 23124487 23126491 + promoter 9 LOC_Os08g06130 expressed protein gene expressed protein chr8 3381474 3386012 - promoter 9 LOC_Os04g32330 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed gene dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed chr4 19206320 19210816 + promoter 9 LOC_Os08g30110 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 18508952 18511961 + promoter 9 LOC_Os09g11130 hypothetical protein gene hypothetical protein chr9 6166523 6167856 + promoter 9 LOC_Os04g01720 conserved hypothetical protein gene conserved hypothetical protein chr4 473154 477488 - promoter 9 LOC_Os07g15330 hypothetical protein gene hypothetical protein chr7 8830340 8833039 - promoter 9 LOC_Os12g34640 hypothetical protein gene hypothetical protein chr12 20987031 20988473 - promoter,downstream 9 LOC_Os07g08360 expressed protein gene expressed protein chr7 4287302 4288478 + promoter 9 LOC_Os12g35600 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 21610850 21611176 + promoter 9 LOC_Os07g14140 LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed gene LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed chr7 8063983 8065303 - promoter 9 LOC_Os05g35910 conserved hypothetical protein gene conserved hypothetical protein chr5 21232388 21233186 + promoter 9 LOC_Os07g38140 expressed protein gene expressed protein chr7 22877502 22878316 - promoter 9 LOC_Os12g37680 hypothetical protein gene hypothetical protein chr12 23097306 23097563 + promoter,downstream 9 LOC_Os08g01460 conserved hypothetical protein gene conserved hypothetical protein chr8 290295 291073 + promoter 9 LOC_Os01g59790 ADP-ribosylation factor, putative, expressed gene ADP-ribosylation factor, putative, expressed chr1 34579298 34583280 + promoter 9 LOC_Os06g19560 peptide transporter, putative gene peptide transporter, putative chr6 11134784 11139734 - promoter 9 LOC_Os11g06360 hypothetical protein gene hypothetical protein chr11 3051008 3051232 - promoter 9 LOC_Os05g05090 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 2473079 2477487 + promoter,downstream 9 LOC_Os12g27020 THION41 - Plant thionin family protein precursor, putative gene THION41 - Plant thionin family protein precursor, putative chr12 15820825 15821118 + promoter 9 LOC_Os03g47629 hypothetical protein gene hypothetical protein chr3 26964859 26965083 + promoter,downstream 9 LOC_Os10g20720 hypothetical protein gene hypothetical protein chr10 10422216 10422612 - promoter 9 LOC_Os07g36290 OsFBX242 - F-box domain containing protein gene OsFBX242 - F-box domain containing protein chr7 21700627 21704674 + promoter,downstream 9 LOC_Os01g15830 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 8916547 8918971 + promoter 9 LOC_Os04g41599 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 24490186 24500237 - promoter,downstream 9 LOC_Os07g06630 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 3229793 3235997 + promoter 9 LOC_Os02g53700 DENN domain containing protein, expressed gene DENN domain containing protein, expressed chr2 32852281 32864539 - promoter 9 LOC_Os02g42960 thylakoid lumenal protein, putative, expressed gene thylakoid lumenal protein, putative, expressed chr2 25849663 25853274 + promoter,downstream 9 LOC_Os01g39700 hypothetical protein gene hypothetical protein chr1 22390357 22391697 + promoter 9 LOC_Os06g28730 hypothetical protein gene hypothetical protein chr6 16352729 16353523 - promoter 9 LOC_Os08g09130 conserved hypothetical protein gene conserved hypothetical protein chr8 5282980 5284605 + promoter 9 LOC_Os05g34160 mTERF domain containing protein, expressed gene mTERF domain containing protein, expressed chr5 20134201 20136071 + promoter 9 LOC_Os06g39800 hypothetical protein gene hypothetical protein chr6 23648636 23648980 - promoter 9 LOC_Os12g38580 hypothetical protein gene hypothetical protein chr12 23668881 23669329 + promoter 9 LOC_Os01g53790 stress-induced protein, putative, expressed gene stress-induced protein, putative, expressed chr1 30917060 30920297 + promoter 9 LOC_Os05g43820 ras-related protein, putative, expressed gene ras-related protein, putative, expressed chr5 25412220 25415603 + promoter 9 LOC_Os04g39440 ras-related protein, putative, expressed gene ras-related protein, putative, expressed chr4 23307791 23310222 + promoter 9 LOC_Os09g28550 hypothetical protein gene hypothetical protein chr9 17358478 17359272 - promoter 9 LOC_Os03g15540 HEAT repeat family protein, putative, expressed gene HEAT repeat family protein, putative, expressed chr3 8545882 8550623 - promoter 9 LOC_Os06g41250 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 24683276 24689295 + promoter 9 LOC_Os06g23360 LTPL70 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL70 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr6 13630704 13631941 + promoter 9 LOC_Os01g05360 hypothetical protein gene hypothetical protein chr1 2534300 2534680 + promoter 9 LOC_Os09g26460 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr9 15983330 15990062 - promoter 9 LOC_Os02g51190 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 31316985 31319277 - promoter 9 LOC_Os01g15610 conserved hypothetical protein gene conserved hypothetical protein chr1 8769874 8772267 + promoter 9 LOC_Os12g22860 hypothetical protein gene hypothetical protein chr12 12903914 12904755 + promoter 9 LOC_Os01g14210 hypothetical protein gene hypothetical protein chr1 7968862 7969755 + promoter,downstream 9 LOC_Os05g50760 hypothetical protein gene hypothetical protein chr5 29043953 29044381 - promoter,downstream 9 LOC_Os10g22950 calmodulin-binding transcription activator, putative, expressed gene calmodulin-binding transcription activator, putative, expressed chr10 11864441 11871723 + promoter 9 LOC_Os12g12990 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 7191306 7196005 + promoter 9 LOC_Os02g17070 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 9763049 9763675 + promoter,downstream 9 LOC_Os01g49440 expressed protein gene expressed protein chr1 28430868 28432361 + promoter 9 LOC_Os07g04630 conserved hypothetical protein gene conserved hypothetical protein chr7 2053479 2053916 + promoter,downstream 9 LOC_Os01g18250 subtilase, putative gene subtilase, putative chr1 10233909 10234999 - promoter 9 LOC_Os11g19210 beta-D-xylosidase, putative, expressed gene beta-D-xylosidase, putative, expressed chr11 10966991 10973024 + promoter 9 LOC_Os11g17030 hypothetical protein gene hypothetical protein chr11 9432725 9433120 + promoter 9 LOC_Os01g70880 histone-like transcription factor and archaeal histone, putative gene histone-like transcription factor and archaeal histone, putative chr1 41020435 41020869 - promoter,downstream 9 LOC_Os04g39370 heavy metal associated domain containing protein gene heavy metal associated domain containing protein chr4 23245002 23246830 - promoter,downstream 9 LOC_Os07g48470 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 28994251 28998057 + promoter 9 LOC_Os01g63020 hypothetical protein gene hypothetical protein chr1 36499056 36502622 + promoter,downstream 9 LOC_Os09g23410 hypothetical protein gene hypothetical protein chr9 13915019 13917896 - promoter,downstream 9 LOC_Os10g29260 speckle-type POZ protein, putative gene speckle-type POZ protein, putative chr10 15156927 15157891 + promoter 9 LOC_Os09g37369 OsSAUR41 - Auxin-responsive SAUR gene family member gene OsSAUR41 - Auxin-responsive SAUR gene family member chr9 21576973 21577558 + promoter 9 LOC_Os01g19350 hypothetical protein gene hypothetical protein chr1 10949408 10949812 - promoter 9 LOC_Os01g14970 expressed protein gene expressed protein chr1 8393453 8394803 + promoter 9 LOC_Os11g07010 hypothetical protein gene hypothetical protein chr11 3480295 3481145 + promoter 9 LOC_Os02g38130 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr2 23056973 23060680 - promoter 9 LOC_Os12g27110 hypothetical protein gene hypothetical protein chr12 15898742 15899200 - promoter 9 LOC_Os11g08970 heat shock factor, putative gene heat shock factor, putative chr11 4756706 4757038 - promoter 9 LOC_Os08g36400 hypothetical protein gene hypothetical protein chr8 22976351 22977504 - promoter 9 LOC_Os07g04460 hypothetical protein gene hypothetical protein chr7 1973329 1973568 + promoter 9 LOC_Os09g25240 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 15113632 15117605 - promoter 9 LOC_Os02g53290 hypothetical protein gene hypothetical protein chr2 32616045 32616665 + promoter 9 LOC_Os04g56830 hypothetical protein gene hypothetical protein chr4 33699701 33700045 + promoter 9 LOC_Os01g25560 RALFL7 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL7 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr1 14485367 14486144 - promoter 9 LOC_Os01g73730 RCLEA5 - Root cap and Late embryogenesis related family protein precursor, expressed gene RCLEA5 - Root cap and Late embryogenesis related family protein precursor, expressed chr1 42709652 42711094 + promoter 9 LOC_Os09g11810 expressed protein gene expressed protein chr9 6608276 6609132 - promoter 9 LOC_Os11g27510 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 15360408 15361612 - promoter 9 LOC_Os01g27130 hypothetical protein gene hypothetical protein chr1 15120039 15122122 - promoter 9 LOC_Os08g19340 expressed protein gene expressed protein chr8 11566394 11568048 - promoter 9 LOC_Os05g39580 bet v I allergen family protein, putative, expressed gene bet v I allergen family protein, putative, expressed chr5 23176623 23178098 - promoter 9 LOC_Os06g30820 expressed protein gene expressed protein chr6 17870087 17873269 - promoter 9 LOC_Os08g43400 kinesin motor domain containing protein, expressed gene kinesin motor domain containing protein, expressed chr8 27432412 27440028 - promoter 9 LOC_Os03g42590 hypothetical protein gene hypothetical protein chr3 23703362 23704048 - promoter 9 LOC_Os03g58620 small multi-drug export protein, putative, expressed gene small multi-drug export protein, putative, expressed chr3 33380960 33384027 - promoter 9 LOC_Os09g17020 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr9 10411381 10415912 + promoter 9 LOC_Os08g09960 hypothetical protein gene hypothetical protein chr8 5754168 5754596 + promoter 9 LOC_Os01g55380 hypothetical protein gene hypothetical protein chr1 31891138 31891571 + promoter,downstream 9 LOC_Os02g01326 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr2 175810 179370 - promoter 9 LOC_Os01g10190 hypothetical protein gene hypothetical protein chr1 5353601 5356705 + promoter 9 LOC_Os08g39670 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr8 25110038 25111982 + promoter 9 LOC_Os02g12159 unknown gene unknown chr2 6323930 6324298 + promoter 9 LOC_Os11g33310 OsFBX424 - F-box domain containing protein gene OsFBX424 - F-box domain containing protein chr11 19234903 19237016 - promoter 9 LOC_Os02g20570 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 12134248 12138246 + promoter 9 LOC_Os01g23750 OsMADS92 - MADS-box family gene with M-beta type-box gene OsMADS92 - MADS-box family gene with M-beta type-box chr1 13359091 13360311 + promoter,downstream 9 LOC_Os02g56780 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 34797090 34800790 - promoter 9 LOC_Os07g10100 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 5409902 5411980 + promoter 9 LOC_Os10g32280 hypothetical protein gene hypothetical protein chr10 16872627 16873075 - promoter 9 LOC_Os10g23910 hypothetical protein gene hypothetical protein chr10 12192219 12193346 - promoter 9 LOC_Os09g28220 NFKB, putative, expressed gene NFKB, putative, expressed chr9 17140365 17142324 + promoter 9 LOC_Os03g20280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 11460434 11462188 + promoter 9 LOC_Os10g40100 protein kinase, putative, expressed gene protein kinase, putative, expressed chr10 21396085 21401245 - promoter 9 LOC_Os03g20020 plant neutral invertase domain containing protein, expressed gene plant neutral invertase domain containing protein, expressed chr3 11282058 11286614 - promoter 9 LOC_Os01g37449 unknown gene unknown chr1 20925733 20926669 + promoter 9 LOC_Os03g63280 regulatory protein, putative, expressed gene regulatory protein, putative, expressed chr3 35759799 35761962 + promoter 9 LOC_Os10g18880 hypothetical protein gene hypothetical protein chr10 9550687 9552402 + promoter 9 LOC_Os08g04490 conserved hypothetical protein gene conserved hypothetical protein chr8 2204116 2208692 + promoter,downstream 9 LOC_Os01g36130 conserved hypothetical protein gene conserved hypothetical protein chr1 19987805 19988146 + promoter,downstream 9 LOC_Os06g08610 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr6 4285709 4286891 + promoter 9 LOC_Os09g25230 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 15112451 15113440 - promoter 9 LOC_Os04g02160 conserved hypothetical protein gene conserved hypothetical protein chr4 722002 722433 - promoter 9 LOC_Os12g41050 hypothetical protein gene hypothetical protein chr12 25374216 25376181 + promoter 9 LOC_Os02g08080 expressed protein gene expressed protein chr2 4264386 4268842 - promoter 9 LOC_Os04g52230 ent-kaurene synthase, chloroplast precursor, putative, expressed gene ent-kaurene synthase, chloroplast precursor, putative, expressed chr4 30841498 30846132 + promoter 9 LOC_Os03g14205 expressed protein gene expressed protein chr3 7704949 7706214 + promoter 9 LOC_Os03g08920 Zinc finger, C3HC4 type domain containing protein, expressed gene Zinc finger, C3HC4 type domain containing protein, expressed chr3 4615280 4617386 - promoter 9 LOC_Os01g37710 conserved hypothetical protein gene conserved hypothetical protein chr1 21081768 21085516 + promoter 9 LOC_Os04g28840 RALFL35 - Rapid ALkalinization Factor RALF family protein precursor, putative gene RALFL35 - Rapid ALkalinization Factor RALF family protein precursor, putative chr4 16912254 16914359 + promoter 9 LOC_Os05g11220 hypothetical protein gene hypothetical protein chr5 6339393 6339605 - promoter 9 LOC_Os01g56620 pseudouridylate synthase, putative, expressed gene pseudouridylate synthase, putative, expressed chr1 32659656 32666381 - promoter 9 LOC_Os01g32920 ZOS1-08 - C2H2 zinc finger protein, expressed gene ZOS1-08 - C2H2 zinc finger protein, expressed chr1 18072533 18073452 + promoter 9 LOC_Os06g49820 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 30150745 30154077 + promoter 9 LOC_Os07g14760 hypothetical protein gene hypothetical protein chr7 8428837 8430434 + promoter 9 LOC_Os05g44150 hypothetical protein gene hypothetical protein chr5 25599301 25599792 + promoter 9 LOC_Os01g73980 xylem cysteine proteinase 2 precursor, putative, expressed gene xylem cysteine proteinase 2 precursor, putative, expressed chr1 42854613 42856422 + promoter 9 LOC_Os05g25570 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 14800662 14805794 + promoter 9 LOC_Os07g01170 hypothetical protein gene hypothetical protein chr7 103808 104248 - promoter 9 LOC_Os07g47450 flowering promoting factor-like 1, putative, expressed gene flowering promoting factor-like 1, putative, expressed chr7 28366903 28367354 + promoter 9 LOC_Os05g42370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 24728376 24734015 + promoter,downstream 9 LOC_Os08g35250 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 22239217 22241775 + promoter 9 LOC_Os02g36690 hypothetical protein gene hypothetical protein chr2 22138388 22139129 - promoter 9 LOC_Os01g10320 class III HD-Zip protein 8, putative, expressed gene class III HD-Zip protein 8, putative, expressed chr1 5425518 5429614 - promoter 9 LOC_Os11g38370 hypothetical protein gene hypothetical protein chr11 22261484 22261738 - promoter,downstream 9 LOC_Os12g28800 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 17018718 17021756 - promoter 9 LOC_Os04g11410 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 6228777 6231486 - promoter 9 LOC_Os03g50590 expressed protein gene expressed protein chr3 28883327 28884336 + promoter 9 LOC_Os03g61660 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 34940875 34944933 + promoter 9 LOC_Os04g15000 hypothetical protein gene hypothetical protein chr4 8421587 8422677 - promoter 9 LOC_Os12g06270 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr12 2981715 2992140 - promoter 9 LOC_Os09g35910 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr9 20671273 20672801 + promoter 9 LOC_Os05g35780 conserved hypothetical protein gene conserved hypothetical protein chr5 21169904 21170392 - promoter,downstream 9 LOC_Os08g18044 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr8 11054392 11061444 - promoter,downstream 9 LOC_Os05g29950 hypothetical protein gene hypothetical protein chr5 17264885 17265908 + promoter,downstream 9 LOC_Os02g34310 hypothetical protein gene hypothetical protein chr2 20523604 20525016 + promoter,downstream 9 LOC_Os06g03090 conserved hypothetical protein gene conserved hypothetical protein chr6 1141381 1142186 - promoter,downstream 9 LOC_Os06g34610 expressed protein gene expressed protein chr6 20125202 20125873 + promoter,downstream 9 LOC_Os11g14250 hypothetical protein gene hypothetical protein chr11 7974373 7974801 + promoter 9 LOC_Os07g05770 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 2772802 2780213 - promoter 9 LOC_Os07g11340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 6244968 6247216 - promoter 9 LOC_Os08g41750 OsFBX303 - F-box domain containing protein, expressed gene OsFBX303 - F-box domain containing protein, expressed chr8 26348467 26349582 + promoter 9 LOC_Os02g11920 hypothetical protein gene hypothetical protein chr2 6172371 6173788 - promoter 9 LOC_Os04g49230 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr4 29181322 29183381 - promoter 9 LOC_Os06g08220 expressed protein gene expressed protein chr6 3980598 3981579 - promoter 9 LOC_Os02g27590 hypothetical protein gene hypothetical protein chr2 16332893 16333886 - promoter 9 LOC_Os11g24850 ankyrin repeat domain containing protein gene ankyrin repeat domain containing protein chr11 13705407 13706243 - promoter,downstream 9 LOC_Os12g23820 hypothetical protein gene hypothetical protein chr12 13538285 13539016 + promoter 9 LOC_Os08g18030 hypothetical protein gene hypothetical protein chr8 11050902 11053738 + promoter 9 LOC_Os12g43400 hypothetical protein gene hypothetical protein chr12 26890545 26891096 + promoter 9 LOC_Os08g04540 decarboxylase, putative, expressed gene decarboxylase, putative, expressed chr8 2255010 2256923 + promoter 9 LOC_Os03g12980 hypothetical protein gene hypothetical protein chr3 7008739 7009521 - promoter 9 LOC_Os04g31360 hypothetical protein gene hypothetical protein chr4 18589235 18589744 - promoter 9 LOC_Os08g39420 uncharacterized protein yeiN, putative, expressed gene uncharacterized protein yeiN, putative, expressed chr8 24926820 24932081 - promoter 9 LOC_Os08g31350 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 19386700 19390328 - promoter 9 LOC_Os10g38880 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr10 20642984 20644112 + promoter 9 LOC_Os04g44230 cytokinin dehydrogenase precursor, putative gene cytokinin dehydrogenase precursor, putative chr4 26014026 26018530 + promoter,downstream 9 LOC_Os05g46930 conserved hypothetical protein gene conserved hypothetical protein chr5 27098370 27098771 + promoter,downstream 9 LOC_Os03g13690 hypothetical protein gene hypothetical protein chr3 7403302 7406372 - promoter 9 LOC_Os08g05360 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr8 2821436 2829066 + promoter 9 LOC_Os12g39170 OsSCP66 - Putative Serine Carboxypeptidase homologue gene OsSCP66 - Putative Serine Carboxypeptidase homologue chr12 24075037 24081156 - promoter,downstream 9 LOC_Os12g36620 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr12 22386197 22393624 - promoter 9 LOC_Os06g36250 conserved hypothetical protein gene conserved hypothetical protein chr6 21225267 21225644 + promoter,downstream 9 LOC_Os12g32060 hypothetical protein gene hypothetical protein chr12 19317764 19318543 + promoter 9 LOC_Os10g05870 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 2960848 2965076 + promoter 9 LOC_Os07g18590 hypothetical protein gene hypothetical protein chr7 10990622 10991447 + promoter 9 LOC_Os10g18710 hypothetical protein gene hypothetical protein chr10 9441455 9442526 - promoter 9 LOC_Os11g31700 expressed protein gene expressed protein chr11 18086367 18090159 - promoter 9 LOC_Os01g50539 unknown gene unknown chr1 29025635 29026908 - promoter 9 LOC_Os01g07040 POEI41 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI41 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr1 3314002 3314609 - promoter,downstream 9 LOC_Os02g16820 glutelin, putative, expressed gene glutelin, putative, expressed chr2 9580479 9582523 + promoter 9 LOC_Os09g15450 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 9454103 9456977 - promoter 9 LOC_Os03g63650 brevis radix, putative gene brevis radix, putative chr3 35946067 35948035 + promoter 9 LOC_Os09g16990 expressed protein gene expressed protein chr9 10384915 10385752 - promoter,downstream 9 LOC_Os08g41040 expressed protein gene expressed protein chr8 25950183 25952054 - promoter 9 LOC_Os05g06520 helix-loop-helix DNA-binding domain containing protein gene helix-loop-helix DNA-binding domain containing protein chr5 3355520 3355774 + promoter 9 LOC_Os09g23470 hypothetical protein gene hypothetical protein chr9 13950086 13950492 + promoter 9 LOC_Os12g44360 sodium/hydrogen exchanger 7, putative, expressed gene sodium/hydrogen exchanger 7, putative, expressed chr12 27460759 27475209 - promoter 9 LOC_Os01g65692 expressed protein gene expressed protein chr1 38145978 38146976 - promoter 9 LOC_Os12g27740 hypothetical protein gene hypothetical protein chr12 16357983 16358513 + promoter 9 LOC_Os12g41030 AP2 domain containing protein gene AP2 domain containing protein chr12 25351562 25351984 - promoter 9 LOC_Os11g30820 expressed protein gene expressed protein chr11 17479959 17482249 - promoter 9 LOC_Os01g24260 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 13666068 13669907 - promoter 9 LOC_Os11g09100 hypothetical protein gene hypothetical protein chr11 4826099 4827968 - promoter,downstream 9 LOC_Os02g15780 hypothetical protein gene hypothetical protein chr2 8914363 8914846 - promoter 9 LOC_Os02g54210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 33229770 33235100 + promoter 9 LOC_Os09g15200 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr9 9227997 9230565 + promoter 9 LOC_Os04g08170 CBL-interacting protein kinase, putative gene CBL-interacting protein kinase, putative chr4 4341297 4341818 + promoter 9 LOC_Os08g07600 expressed protein gene expressed protein chr8 4267286 4267978 + promoter 9 LOC_Os04g24490 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 14032718 14039144 + promoter,downstream 9 LOC_Os03g43490 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 24259428 24260743 + promoter 9 LOC_Os11g13770 conserved hypothetical protein gene conserved hypothetical protein chr11 7571605 7572159 - promoter 9 LOC_Os11g36530 heat shock protein DnaJ, putative gene heat shock protein DnaJ, putative chr11 21086507 21090304 - promoter 9 LOC_Os12g05280 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr12 2349648 2350376 + promoter 9 LOC_Os01g43290 conserved hypothetical protein gene conserved hypothetical protein chr1 24740675 24741184 + promoter 9 LOC_Os11g42989 exo70 exocyst complex subunit, putative, expressed gene exo70 exocyst complex subunit, putative, expressed chr11 25445416 25447428 + promoter 9 LOC_Os03g39640 CBS domain containing protein, expressed gene CBS domain containing protein, expressed chr3 22014658 22028247 - promoter 9 LOC_Os08g34990 late embryogenesis abundant protein, putative gene late embryogenesis abundant protein, putative chr8 22034652 22034969 + promoter 9 LOC_Os05g35870 hypothetical protein gene hypothetical protein chr5 21216907 21217435 - promoter 9 LOC_Os02g01900 expressed protein gene expressed protein chr2 491452 492759 + promoter 9 LOC_Os10g40804 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 21862850 21865512 - promoter 9 LOC_Os04g46840 hypothetical protein gene hypothetical protein chr4 27570168 27571389 + promoter,downstream 9 LOC_Os01g18500 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 10401693 10404794 - promoter 9 LOC_Os06g08410 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 4105714 4111037 - promoter 9 LOC_Os02g47470 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 28989848 28992712 + promoter 9 LOC_Os01g58670 conserved hypothetical protein gene conserved hypothetical protein chr1 33913163 33917391 + promoter 9 LOC_Os07g48920 aldehyde dehydrogenase, putative, expressed gene aldehyde dehydrogenase, putative, expressed chr7 29270528 29276753 - promoter 9 LOC_Os04g41840 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 24602285 24609593 - promoter 9 LOC_Os01g52610 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr1 30240903 30250060 + promoter 9 LOC_Os02g48540 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 29708013 29709564 - promoter 9 LOC_Os10g18520 hypothetical protein gene hypothetical protein chr10 9325102 9325317 - promoter 9 LOC_Os03g25260 HIT zinc finger domain containing protein, expressed gene HIT zinc finger domain containing protein, expressed chr3 14423318 14426558 + promoter 9 LOC_Os10g37170 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 19812757 19816776 + promoter 9 LOC_Os05g16230 expressed protein gene expressed protein chr5 9179107 9180216 - promoter 9 LOC_Os07g35720 expressed protein gene expressed protein chr7 21390480 21392567 - promoter 9 LOC_Os08g12240 hypothetical protein gene hypothetical protein chr8 7205070 7206029 - promoter,downstream 9 LOC_Os02g24700 OsSAUR8 - Auxin-responsive SAUR gene family member, expressed gene OsSAUR8 - Auxin-responsive SAUR gene family member, expressed chr2 14327236 14328144 + promoter 9 LOC_Os06g16780 hypothetical protein gene hypothetical protein chr6 9713062 9713694 + promoter 9 LOC_Os07g08579 unknown gene unknown chr7 4426862 4427512 + promoter 9 LOC_Os07g23450 ZOS7-04 - C2H2 zinc finger protein gene ZOS7-04 - C2H2 zinc finger protein chr7 13245587 13245898 + promoter 9 LOC_Os07g04820 protein kinase, putative, expressed gene protein kinase, putative, expressed chr7 2130761 2132501 - promoter 9 LOC_Os06g06310 hypothetical protein gene hypothetical protein chr6 2928391 2930982 + promoter 9 LOC_Os03g37170 hypothetical protein gene hypothetical protein chr3 20592861 20593684 - promoter 9 LOC_Os02g01360 OsMADS60 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS60 - MADS-box family gene with MIKCc type-box, expressed chr2 205424 207508 + promoter 9 LOC_Os08g12320 hypothetical protein gene hypothetical protein chr8 7257386 7257944 + promoter,downstream 9 LOC_Os08g08170 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 4647902 4651393 + promoter 9 LOC_Os11g11440 protein disulfide isomerase, putative gene protein disulfide isomerase, putative chr11 6354813 6355654 - promoter 9 LOC_Os12g05250 hypothetical protein gene hypothetical protein chr12 2333466 2333743 + promoter 9 LOC_Os02g13760 hypothetical protein gene hypothetical protein chr2 7428762 7429193 - promoter 9 LOC_Os04g26650 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 15543789 15546345 - promoter 9 LOC_Os09g28530 hypothetical protein gene hypothetical protein chr9 17353470 17353886 + promoter 9 LOC_Os03g22250 POEI48 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed gene POEI48 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed chr3 12756774 12761790 - promoter 9 LOC_Os06g35540 aminotransferase, classes I and II, domain containing protein, expressed gene aminotransferase, classes I and II, domain containing protein, expressed chr6 20726095 20730774 - promoter 9 LOC_Os05g49520 CTP synthase, putative gene CTP synthase, putative chr5 28329544 28335279 + promoter 9 LOC_Os09g19780 hypothetical protein gene hypothetical protein chr9 11836068 11836760 + promoter 9 LOC_Os07g03418 phototropin, putative gene phototropin, putative chr7 1368350 1368796 - promoter 9 LOC_Os07g44390 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 26520942 26525166 - promoter 9 LOC_Os11g26580 MEGL18 - Maternally expressed gene MEG family protein precursor, putative gene MEGL18 - Maternally expressed gene MEG family protein precursor, putative chr11 14763314 14763684 - promoter 9 LOC_Os06g30610 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 17706575 17713430 - promoter,downstream 9 LOC_Os05g49830 lipase class 3 family protein, putative, expressed gene lipase class 3 family protein, putative, expressed chr5 28534931 28536240 + promoter 9 LOC_Os06g23640 hypothetical protein gene hypothetical protein chr6 13785385 13787326 + promoter 9 LOC_Os05g40130 hypothetical protein gene hypothetical protein chr5 23510103 23510673 - promoter 9 LOC_Os11g01060 hypothetical protein gene hypothetical protein chr11 28626 30038 - promoter 9 LOC_Os06g46690 exostosin family protein, putative, expressed gene exostosin family protein, putative, expressed chr6 28362633 28367050 - promoter 9 LOC_Os04g49180 hypothetical protein gene hypothetical protein chr4 29140750 29141094 + promoter,downstream 9 LOC_Os04g56580 inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed gene inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed chr4 33550023 33554291 - promoter 9 LOC_Os12g04100 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 1715156 1717030 + promoter 9 LOC_Os06g31300 PPR repeat domain containing protein, putative gene PPR repeat domain containing protein, putative chr6 18216580 18217775 - promoter 9 LOC_Os04g06244 kinase, putative gene kinase, putative chr4 3234417 3238538 + promoter 9 LOC_Os11g40200 expressed protein gene expressed protein chr11 23510657 23513726 + promoter 9 LOC_Os10g22680 conserved hypothetical protein gene conserved hypothetical protein chr10 11711328 11712114 + promoter 9 LOC_Os04g48220 expressed protein gene expressed protein chr4 28536142 28536709 - promoter 9 LOC_Os01g43270 hydroquinone glucosyltransferase, putative gene hydroquinone glucosyltransferase, putative chr1 24711126 24712568 - promoter 9 LOC_Os04g15840 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr4 8594285 8595573 + promoter 9 LOC_Os09g25630 hypothetical protein gene hypothetical protein chr9 15394296 15394811 - promoter 9 LOC_Os04g45960 OsSub42 - Putative Subtilisin homologue, expressed gene OsSub42 - Putative Subtilisin homologue, expressed chr4 27036564 27041269 + promoter 9 LOC_Os02g30250 conserved hypothetical protein gene conserved hypothetical protein chr2 17978830 17980172 + promoter 9 LOC_Os11g19070 hypothetical protein gene hypothetical protein chr11 10865731 10866496 - promoter 9 LOC_Os09g24469 unknown gene unknown chr9 14562085 14562962 + promoter 9 LOC_Os03g26190 hypothetical protein gene hypothetical protein chr3 14990954 14991320 - promoter 9 LOC_Os04g50070 ZOS4-13 - C2H2 zinc finger protein gene ZOS4-13 - C2H2 zinc finger protein chr4 29678125 29678706 + promoter 9 LOC_Os04g43990 DUF584 domain containing protein, putative, expressed gene DUF584 domain containing protein, putative, expressed chr4 25889557 25890744 - promoter 9 LOC_Os12g34700 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 21031300 21035208 + promoter 9 LOC_Os08g24620 hypothetical protein gene hypothetical protein chr8 14876313 14877240 + promoter 9 LOC_Os03g56974 latent nuclear antigen, putative gene latent nuclear antigen, putative chr3 32449742 32450557 + promoter 9 LOC_Os02g46320 glucosyltransferase, putative, expressed gene glucosyltransferase, putative, expressed chr2 28227792 28231347 + promoter 9 LOC_Os03g55750 hypothetical protein gene hypothetical protein chr3 31738497 31740327 - promoter,downstream 9 LOC_Os04g01930 exostosin family protein, putative gene exostosin family protein, putative chr4 584941 586523 + promoter 9 LOC_Os03g06810 expressed protein gene expressed protein chr3 3453765 3454355 - promoter,downstream 9 LOC_Os12g29360 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 17421617 17427301 + promoter 9 LOC_Os10g08269 unknown gene unknown chr10 4492345 4492852 + promoter,downstream 9 LOC_Os09g28900 basic helix-loop-helix, putative gene basic helix-loop-helix, putative chr9 17564470 17565196 + promoter,downstream 9 LOC_Os01g61540 conserved hypothetical protein gene conserved hypothetical protein chr1 35593899 35594729 + promoter 9 LOC_Os03g13370 tetratricopeptide repeat domain containing protein, expressed gene tetratricopeptide repeat domain containing protein, expressed chr3 7210427 7220255 + promoter 9 LOC_Os03g48904 expressed protein gene expressed protein chr3 27840026 27846527 + promoter 9 LOC_Os03g37940 hypothetical protein gene hypothetical protein chr3 21065063 21065533 + promoter 9 LOC_Os03g22140 tetratricopeptide repeat domain containing protein, expressed gene tetratricopeptide repeat domain containing protein, expressed chr3 12688356 12690309 + promoter 9 LOC_Os01g44970 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr1 25512762 25517198 + promoter 9 LOC_Os11g06670 expressed protein gene expressed protein chr11 3242420 3245833 + promoter 9 LOC_Os04g42860 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr4 25183235 25186977 + promoter 9 LOC_Os05g39920 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 23391944 23396293 - promoter,downstream 9 LOC_Os05g02910 hypothetical protein gene hypothetical protein chr5 1062234 1066675 - promoter 9 LOC_Os03g52594 CCR4-NOT transcription factor, putative, expressed gene CCR4-NOT transcription factor, putative, expressed chr3 30150022 30166976 - promoter 9 LOC_Os05g13804 expressed protein gene expressed protein chr5 7660205 7661846 + promoter 9 LOC_Os08g31720 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr8 19652642 19653315 + promoter 9 LOC_Os02g36510 ethylene-insensitive 3, putative, expressed gene ethylene-insensitive 3, putative, expressed chr2 22051059 22052742 + promoter 9 LOC_Os08g39460 AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed gene AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed chr8 24963052 24964763 + promoter 9 LOC_Os07g06262 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 3045976 3048917 + promoter 9 LOC_Os01g03250 hypothetical protein gene hypothetical protein chr1 1314268 1314477 + promoter,downstream 9 LOC_Os10g03890 hypothetical protein gene hypothetical protein chr10 1767392 1767969 + promoter 9 LOC_Os01g02800 receptor-like kinase ARK1AS, putative, expressed gene receptor-like kinase ARK1AS, putative, expressed chr1 983301 985760 - promoter 9 LOC_Os10g09180 hypothetical protein gene hypothetical protein chr10 4973758 4975849 + promoter,downstream 9 LOC_Os02g25080 expressed protein gene expressed protein chr2 14551212 14553253 + promoter 9 LOC_Os01g53580 3-5 exonuclease domain-containing protein, putative gene 3-5 exonuclease domain-containing protein, putative chr1 30767431 30768057 + promoter 9 LOC_Os03g62080 mRNA-decapping enzyme, putative, expressed gene mRNA-decapping enzyme, putative, expressed chr3 35160988 35166948 - promoter 9 LOC_Os02g33400 OsFBL9 - F-box domain and LRR containing protein, expressed gene OsFBL9 - F-box domain and LRR containing protein, expressed chr2 19836320 19839300 - promoter 9 LOC_Os03g38400 GDSL-motif lipase/hydrolase family protein, putative gene GDSL-motif lipase/hydrolase family protein, putative chr3 21313840 21314273 - promoter 9 LOC_Os01g10240 urate anion exchanger, putative, expressed gene urate anion exchanger, putative, expressed chr1 5385995 5387128 + promoter 9 LOC_Os05g35010 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr5 20729875 20731808 - promoter 9 LOC_Os02g44100 expressed protein gene expressed protein chr2 26614423 26616451 + promoter 9 LOC_Os09g39130 expressed protein gene expressed protein chr9 22458747 22461365 - promoter,downstream 9 LOC_Os01g31494 conserved hypothetical protein gene conserved hypothetical protein chr1 17225615 17227652 - promoter 9 LOC_Os03g59340 CESA2 - cellulose synthase, expressed gene CESA2 - cellulose synthase, expressed chr3 33772883 33779337 - promoter 9 LOC_Os06g38460 conserved hypothetical protein gene conserved hypothetical protein chr6 22790491 22790871 - promoter 9 LOC_Os11g32010 hypothetical protein gene hypothetical protein chr11 18401665 18402084 + promoter 9 LOC_Os01g03390 BBTI7 - Bowman-Birk type bran trypsin inhibitor precursor, expressed gene BBTI7 - Bowman-Birk type bran trypsin inhibitor precursor, expressed chr1 1364508 1365503 - promoter 9 LOC_Os01g07700 expressed protein gene expressed protein chr1 3695142 3698805 - promoter 9 LOC_Os03g25320 peroxidase precursor, putative gene peroxidase precursor, putative chr3 14453417 14455177 + promoter 9 LOC_Os07g27300 RNA-binding protein Luc7-like, putative, expressed gene RNA-binding protein Luc7-like, putative, expressed chr7 15867936 15873107 - promoter 9 LOC_Os01g44950 AMP-binding enzyme, putative gene AMP-binding enzyme, putative chr1 25498055 25499923 - promoter 9 LOC_Os04g23370 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 13351589 13354608 + promoter 9 LOC_Os12g32170 hypothetical protein gene hypothetical protein chr12 19385421 19386206 - promoter 9 LOC_Os03g10010 hypothetical protein gene hypothetical protein chr3 5013349 5013669 + promoter,downstream 9 LOC_Os09g20960 conserved hypothetical protein gene conserved hypothetical protein chr9 12624093 12624368 + promoter 9 LOC_Os11g47680 thaumatin family domain containing protein, expressed gene thaumatin family domain containing protein, expressed chr11 28259937 28260771 + promoter 9 LOC_Os01g21750 conserved hypothetical protein gene conserved hypothetical protein chr1 12204521 12204862 - promoter 9 LOC_Os01g68580 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr1 39835596 39836214 + promoter,downstream 9 LOC_Os06g50910 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed gene Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed chr6 30796114 30814785 - promoter 9 LOC_Os01g66600 rhodanese-like, putative, expressed gene rhodanese-like, putative, expressed chr1 38683380 38687054 - promoter 9 LOC_Os10g40490 U-box domain containing protein, expressed gene U-box domain containing protein, expressed chr10 21607560 21609910 + promoter,downstream 9 LOC_Os08g27230 hypothetical protein gene hypothetical protein chr8 16618980 16619471 - promoter 9 LOC_Os02g52860 phosphate carrier protein, mitochondrial precursor, putative, expressed gene phosphate carrier protein, mitochondrial precursor, putative, expressed chr2 32313495 32317463 - promoter 9 LOC_Os12g03840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 1572521 1573733 + promoter,downstream 9 LOC_Os07g14000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 7996146 8000489 + promoter 9 LOC_Os02g47930 expressed protein gene expressed protein chr2 29314618 29317124 - promoter 9 LOC_Os03g55230 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 31429216 31430840 + promoter 9 LOC_Os08g16914 expressed protein gene expressed protein chr8 10359413 10363294 - promoter 9 LOC_Os03g53170 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr3 30495294 30499977 + promoter 9 LOC_Os09g23640 ABC-2 type transporter domain containing protein gene ABC-2 type transporter domain containing protein chr9 14045753 14049423 + promoter 9 LOC_Os04g22880 conserved hypothetical protein gene conserved hypothetical protein chr4 12962701 12965651 + promoter 9 LOC_Os03g31890 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 18241397 18244323 + promoter 9 LOC_Os03g59874 conserved hypothetical protein gene conserved hypothetical protein chr3 34078576 34079102 - promoter 9 LOC_Os05g05960 hypothetical protein gene hypothetical protein chr5 2982976 2983293 + promoter,downstream 9 LOC_Os01g55090 transposon protein, putative, Mutator sub-class, expressed gene transposon protein, putative, Mutator sub-class, expressed chr1 31671151 31675312 - promoter 9 LOC_Os08g33140 F-box domain containing protein, expressed gene F-box domain containing protein, expressed chr8 20588746 20593883 + promoter 9 LOC_Os03g01330 sodium/potassium/calcium exchanger 1, putative gene sodium/potassium/calcium exchanger 1, putative chr3 234794 235750 - promoter,downstream 9 LOC_Os10g32080 xyloglucan galactosyltransferase KATAMARI1, putative, expressed gene xyloglucan galactosyltransferase KATAMARI1, putative, expressed chr10 16780684 16782326 - promoter 9 LOC_Os02g18730 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr2 10925193 10928745 + promoter 9 LOC_Os01g10200 hypothetical protein gene hypothetical protein chr1 5368402 5368891 + promoter 9 LOC_Os02g51330 MAG2, putative, expressed gene MAG2, putative, expressed chr2 31426723 31432165 - promoter 9 LOC_Os02g50420 hypothetical protein gene hypothetical protein chr2 30782962 30783240 + promoter 9 LOC_Os11g36030 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr11 20712092 20716162 - promoter 9 LOC_Os03g53340 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr3 30596853 30600053 - promoter,downstream 9 LOC_Os04g34860 hypothetical protein gene hypothetical protein chr4 20974879 20975307 + promoter 9 LOC_Os07g37990 glycosyltransferase sugar-binding region containing DXD motif, putative, expressed gene glycosyltransferase sugar-binding region containing DXD motif, putative, expressed chr7 22790768 22797444 - promoter 9 LOC_Os03g24699 unknown gene unknown chr3 14076666 14076779 - promoter 9 LOC_Os05g08550 hypothetical protein gene hypothetical protein chr5 4663600 4664449 - promoter 9 LOC_Os01g23590 suppressor of Mek, putative, expressed gene suppressor of Mek, putative, expressed chr1 13245361 13261202 - promoter 9 LOC_Os08g11640 hypothetical protein gene hypothetical protein chr8 6830608 6832308 + promoter 9 LOC_Os11g34000 hypothetical protein gene hypothetical protein chr11 19406056 19406340 + promoter 9 LOC_Os01g72330 OsRR4 type-A response regulator, expressed gene OsRR4 type-A response regulator, expressed chr1 41947909 41951345 + promoter 9 LOC_Os02g11080 hypothetical protein gene hypothetical protein chr2 5935644 5936940 + promoter 9 LOC_Os01g44140 expressed protein gene expressed protein chr1 25299930 25301899 - promoter 9 LOC_Os10g30170 hypothetical protein gene hypothetical protein chr10 15612763 15613476 - promoter 9 LOC_Os07g16299 unknown gene unknown chr7 9513920 9514167 - promoter 9 LOC_Os07g04910 reticulon domain containing protein, putative, expressed gene reticulon domain containing protein, putative, expressed chr7 2169639 2171893 + promoter,downstream 9 LOC_Os06g14700 myb-like DNA-binding domain containing protein gene myb-like DNA-binding domain containing protein chr6 8271684 8272220 + promoter 9 LOC_Os08g08490 hypothetical protein gene hypothetical protein chr8 4893743 4895073 - promoter 9 LOC_Os07g09970 LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 5312789 5317165 + promoter 9 LOC_Os05g19610 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr5 11421539 11426298 - promoter 9 LOC_Os02g57790 ZOS2-19 - C2H2 zinc finger protein gene ZOS2-19 - C2H2 zinc finger protein chr2 35383735 35384718 - promoter 9 LOC_Os10g28860 MBTB39 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed gene MBTB39 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed chr10 14972808 14974169 + promoter 9 LOC_Os02g10360 MONOCULM 1, putative gene MONOCULM 1, putative chr2 5451819 5453090 - promoter 9 LOC_Os02g44350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 26822577 26824805 - promoter 9 LOC_Os11g43260 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 25626849 25632498 - promoter 9 LOC_Os10g05630 hypothetical protein gene hypothetical protein chr10 2812556 2812810 - promoter 9 LOC_Os02g49360 RNA methyltransferase domain-containing protein 2, putative, expressed gene RNA methyltransferase domain-containing protein 2, putative, expressed chr2 30153263 30155849 + promoter,downstream 9 LOC_Os05g34610 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 20466115 20468413 + promoter 9 LOC_Os12g29264 unknown gene unknown chr12 17332896 17334041 + promoter 9 LOC_Os11g31390 hypothetical protein gene hypothetical protein chr11 17848400 17852629 + promoter,downstream 9 LOC_Os04g10020 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 5384287 5387984 - promoter 9 LOC_Os03g54180 hypothetical protein gene hypothetical protein chr3 31052769 31053043 + promoter,downstream 9 LOC_Os01g12120 hypothetical protein gene hypothetical protein chr1 6605521 6606239 - promoter 9 LOC_Os12g40770 ankyrin-1, putative, expressed gene ankyrin-1, putative, expressed chr12 25202409 25207146 + promoter 9 LOC_Os10g03880 CAF1 family ribonuclease containing protein, putative gene CAF1 family ribonuclease containing protein, putative chr10 1765323 1766198 + promoter,downstream 9 LOC_Os06g37250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 21997613 21998647 + promoter 9 LOC_Os12g09739 pollen signalling protein with adenylyl cyclase activity, putative, expressed gene pollen signalling protein with adenylyl cyclase activity, putative, expressed chr12 5136593 5148479 - promoter 9 LOC_Os09g39770 C2 domain containing protein, putative, expressed gene C2 domain containing protein, putative, expressed chr9 22805129 22806568 - promoter 9 LOC_Os02g36320 RING-H2 finger protein ATL3B precursor, putative gene RING-H2 finger protein ATL3B precursor, putative chr2 21917048 21918094 - promoter 9 LOC_Os10g08300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 4500814 4503859 + promoter 9 LOC_Os07g36060 SMP-30/Gluconolaconase/LRE-like region containing protein gene SMP-30/Gluconolaconase/LRE-like region containing protein chr7 21563063 21564118 + promoter,downstream 9 LOC_Os10g06690 expressed protein gene expressed protein chr10 3463376 3463878 - promoter 9 LOC_Os07g17020 hypothetical protein gene hypothetical protein chr7 10021452 10021881 - promoter 9 LOC_Os01g72310 OsFBO7 - F-box and other domain containing protein, expressed gene OsFBO7 - F-box and other domain containing protein, expressed chr1 41918587 41924259 + promoter 9 LOC_Os01g34930 callose synthase, putative, expressed gene callose synthase, putative, expressed chr1 19302305 19304991 - promoter 9 LOC_Os04g25840 OsFBX128 - F-box domain containing protein gene OsFBX128 - F-box domain containing protein chr4 15016145 15017740 + promoter 9 LOC_Os01g60549 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 35011623 35012237 - promoter 9 LOC_Os12g25130 CRP8 - Cysteine-rich family protein precursor, expressed gene CRP8 - Cysteine-rich family protein precursor, expressed chr12 14430671 14431393 - promoter,downstream 9 LOC_Os11g46010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 27378878 27381850 - promoter 9 LOC_Os03g57950 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed gene type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed chr3 33003825 33007266 + promoter 9 LOC_Os08g15560 hypothetical protein gene hypothetical protein chr8 9459985 9460809 - promoter 9 LOC_Os01g18260 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 10247061 10250759 - promoter 9 LOC_Os10g31350 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr10 16374014 16377021 + promoter 9 LOC_Os04g37660 protein phosphotase protein, putative, expressed gene protein phosphotase protein, putative, expressed chr4 22204186 22208714 - promoter 9 LOC_Os04g34790 unknown gene unknown chr4 20912225 20912438 + promoter 9 LOC_Os04g47940 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 28321749 28322150 - promoter 9 LOC_Os04g52270 coatomer subunit epsilon, putative, expressed gene coatomer subunit epsilon, putative, expressed chr4 30878731 30883760 - promoter 9 LOC_Os05g46380 OsFBX174 - F-box domain containing protein, expressed gene OsFBX174 - F-box domain containing protein, expressed chr5 26822313 26824689 + promoter 9 LOC_Os08g36810 hypothetical protein gene hypothetical protein chr8 23254145 23255454 - promoter 9 LOC_Os12g13209 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 7356606 7356956 - promoter 9 LOC_Os03g28204 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr3 16228061 16235656 + promoter 9 LOC_Os07g20140 conserved hypothetical protein gene conserved hypothetical protein chr7 11629188 11629415 - promoter 9 LOC_Os12g05480 hypothetical protein gene hypothetical protein chr12 2507911 2508183 - promoter 9 LOC_Os03g43050 LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL90 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr3 24012963 24014085 - promoter,downstream 9 LOC_Os12g25370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 14631795 14634026 - promoter 9 LOC_Os07g34850 aspartic proteinase nepenthesin, putative, expressed gene aspartic proteinase nepenthesin, putative, expressed chr7 20883624 20885196 + promoter 9 LOC_Os02g05000 expressed protein gene expressed protein chr2 2369555 2371346 + promoter 9 LOC_Os04g43829 unknown gene unknown chr4 25764506 25765037 + promoter 9 LOC_Os02g33640 expressed protein gene expressed protein chr2 20028347 20030626 + promoter 9 LOC_Os01g16730 ulp1 protease family, C-terminal catalytic domain containing protein, expressed gene ulp1 protease family, C-terminal catalytic domain containing protein, expressed chr1 9493785 9502157 + promoter 9 LOC_Os05g31380 GRAS family transcription factor containing protein gene GRAS family transcription factor containing protein chr5 18174332 18175987 + promoter,downstream 9 LOC_Os11g25510 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr11 14062002 14063527 + promoter 9 LOC_Os11g07912 MLO domain containing protein, putative, expressed gene MLO domain containing protein, putative, expressed chr11 4082034 4086654 + promoter 9 LOC_Os06g32930 conserved hypothetical protein gene conserved hypothetical protein chr6 19180368 19181688 - promoter 9 LOC_Os02g53930 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 33009988 33012249 - promoter 9 LOC_Os03g51110 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr3 29229226 29231434 + promoter,downstream 9 LOC_Os10g03280 hypothetical protein gene hypothetical protein chr10 1387782 1388163 + promoter 9 LOC_Os03g55430 expressed protein gene expressed protein chr3 31530732 31531727 + promoter 9 LOC_Os04g34870 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 21004116 21004825 + promoter 9 LOC_Os09g20140 hypothetical protein gene hypothetical protein chr9 12064291 12065414 - promoter,downstream 9 LOC_Os11g39929 unknown gene unknown chr11 23329926 23330539 - promoter 9 LOC_Os12g43720 early-responsive to dehydration protein-related, putative, expressed gene early-responsive to dehydration protein-related, putative, expressed chr12 27120849 27126861 - promoter 9 LOC_Os03g49850 hypothetical protein gene hypothetical protein chr3 28400838 28401197 + promoter 9 LOC_Os05g23240 CAX-interacting protein 4, putative gene CAX-interacting protein 4, putative chr5 13203917 13204810 - promoter 9 LOC_Os04g30960 hypothetical protein gene hypothetical protein chr4 18330402 18330662 - promoter 9 LOC_Os07g34760 expressed protein gene expressed protein chr7 20825001 20826220 + promoter 9 LOC_Os06g30620 conserved hypothetical protein gene conserved hypothetical protein chr6 17716021 17716539 + promoter 9 LOC_Os10g25740 cellulose synthase, putative gene cellulose synthase, putative chr10 13268175 13268537 - promoter 9 LOC_Os06g39590 OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA23 - Auxin-responsive Aux/IAA gene family member, expressed chr6 23500976 23502506 + promoter 9 LOC_Os04g56960 hypothetical protein gene hypothetical protein chr4 33768027 33769753 + promoter 9 LOC_Os01g10480 plastocyanin-like domain containing protein, putative gene plastocyanin-like domain containing protein, putative chr1 5542648 5543544 - promoter,downstream 9 LOC_Os03g19620 hypothetical protein gene hypothetical protein chr3 11035632 11036015 + promoter 9 LOC_Os12g14660 hypothetical protein gene hypothetical protein chr12 8382722 8384434 + promoter 9 LOC_Os06g39430 hypothetical protein gene hypothetical protein chr6 23408358 23409028 - promoter 9 LOC_Os04g55000 cullin, putative gene cullin, putative chr4 32518152 32518790 + promoter 9 LOC_Os03g40490 hypothetical protein gene hypothetical protein chr3 22510750 22511034 - promoter 9 LOC_Os09g18020 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed chr9 11029070 11038913 - promoter 9 LOC_Os07g07830 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 3930538 3932792 + promoter 9 LOC_Os05g35930 expressed protein gene expressed protein chr5 21237888 21238889 + promoter 9 LOC_Os12g42300 potasium efflux antiporter protein, putative, expressed gene potasium efflux antiporter protein, putative, expressed chr12 26266247 26272545 - promoter 9 LOC_Os03g52940 expressed protein gene expressed protein chr3 30361992 30362839 + promoter 9 LOC_Os08g43640 26S proteasome non-ATPase regulatory subunit 3, putative, expressed gene 26S proteasome non-ATPase regulatory subunit 3, putative, expressed chr8 27585526 27589352 - promoter,downstream 9 LOC_Os02g47290 hypothetical protein gene hypothetical protein chr2 28869364 28870848 + promoter 9 LOC_Os02g28230 hypothetical protein gene hypothetical protein chr2 16701068 16701373 + promoter 9 LOC_Os11g07670 dirigent, putative, expressed gene dirigent, putative, expressed chr11 3912620 3913671 - promoter 9 LOC_Os03g44900 CCR4-NOT transcription factor, putative, expressed gene CCR4-NOT transcription factor, putative, expressed chr3 25332358 25343086 + promoter 9 LOC_Os01g15819 unknown gene unknown chr1 8914474 8915097 - promoter,downstream 9 LOC_Os11g36260 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 20881238 20881615 + promoter 9 LOC_Os11g41540 disease resistance RPP8-like protein 3, putative, expressed gene disease resistance RPP8-like protein 3, putative, expressed chr11 24445341 24450890 + promoter 9 LOC_Os07g31830 GTPase activating protein, putative, expressed gene GTPase activating protein, putative, expressed chr7 18910794 18913898 + promoter 9 LOC_Os01g12790 receptor protein kinase, putative gene receptor protein kinase, putative chr1 7078900 7084596 + promoter 9 LOC_Os06g08700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 4335267 4335824 + promoter 9 LOC_Os05g46790 expressed protein gene expressed protein chr5 27038950 27039588 + promoter,downstream 9 LOC_Os02g11090 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 5943967 5946323 + promoter 9 LOC_Os07g44260 dirigent, putative gene dirigent, putative chr7 26449012 26449476 - promoter,downstream 9 LOC_Os05g16060 hypothetical protein gene hypothetical protein chr5 9063657 9066715 - promoter 9 LOC_Os01g67660 hypothetical protein gene hypothetical protein chr1 39320650 39322157 + promoter,downstream 9 LOC_Os05g05354 expressed protein gene expressed protein chr5 2638825 2649031 - promoter 9 LOC_Os03g41438 serpin domain containing protein, putative, expressed gene serpin domain containing protein, putative, expressed chr3 23053071 23066803 + promoter 9 LOC_Os04g46410 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr4 27338261 27339004 + promoter 9 LOC_Os11g47160 receptor kinase 1, putative gene receptor kinase 1, putative chr11 27848036 27850764 + promoter 9 LOC_Os03g24730 expressed protein gene expressed protein chr3 14093069 14096677 + promoter 9 LOC_Os02g01410 hypothetical protein gene hypothetical protein chr2 247646 248321 - promoter 9 LOC_Os04g28570 fatty acyl coA reductase, putative gene fatty acyl coA reductase, putative chr4 16743649 16745317 + promoter 9 LOC_Os05g13640 hypothetical protein gene hypothetical protein chr5 7559657 7560070 - promoter 9 LOC_Os05g51000 expressed protein gene expressed protein chr5 29208593 29212153 - promoter 9 LOC_Os08g08740 hypothetical protein gene hypothetical protein chr8 5067639 5068643 - promoter 9 LOC_Os01g61560 phosphatidate cytidylyltransferase, putative, expressed gene phosphatidate cytidylyltransferase, putative, expressed chr1 35599988 35602986 - promoter 9 LOC_Os07g11020 rc - bHLH transcription factor regulating proanthocyanidin production in seeds gene rc - bHLH transcription factor regulating proanthocyanidin production in seeds chr7 6061890 6068318 + promoter,downstream 9 LOC_Os01g47360 GATA zinc finger domain containing protein gene GATA zinc finger domain containing protein chr1 27054916 27055805 - promoter,downstream 9 LOC_Os11g07460 TCP family transcription factor, putative, expressed gene TCP family transcription factor, putative, expressed chr11 3754391 3757470 - promoter,downstream 9 LOC_Os12g04410 BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed gene BTBA6 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed chr12 1868475 1871099 + promoter,downstream 9 LOC_Os02g12540 cytochrome P450, putative gene cytochrome P450, putative chr2 6556026 6558023 + promoter 9 LOC_Os09g16810 OsFBX317 - F-box domain containing protein gene OsFBX317 - F-box domain containing protein chr9 10271653 10272957 + promoter 9 LOC_Os02g37510 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 22632413 22634126 - promoter 9 LOC_Os02g47780 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr2 29218004 29220458 - promoter 9 LOC_Os05g03420 conserved hypothetical protein gene conserved hypothetical protein chr5 1422126 1423898 + promoter 9 LOC_Os06g10200 adenylate kinase, putative, expressed gene adenylate kinase, putative, expressed chr6 5220420 5224271 + promoter 9 LOC_Os02g47400 pectinacetylesterase domain containing protein, expressed gene pectinacetylesterase domain containing protein, expressed chr2 28929567 28933403 + promoter 9 LOC_Os02g08020 hypothetical protein gene hypothetical protein chr2 4214152 4215191 - promoter 9 LOC_Os11g20440 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 11822759 11825756 + promoter 9 LOC_Os09g07940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 4073208 4076005 - promoter 9 LOC_Os11g30920 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr11 17525043 17527706 + promoter 9 LOC_Os02g15800 expressed protein gene expressed protein chr2 8927815 8928738 + promoter 9 LOC_Os06g33410 hypothetical protein gene hypothetical protein chr6 19453210 19454390 - promoter 9 LOC_Os12g27200 hypothetical protein gene hypothetical protein chr12 15960022 15960786 + promoter 9 LOC_Os04g02390 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 857955 859421 + promoter 9 LOC_Os02g36900 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 22284114 22284779 + promoter 9 LOC_Os01g07200 staphylococcal nuclease homologue, putative, expressed gene staphylococcal nuclease homologue, putative, expressed chr1 3396337 3399518 + promoter 9 LOC_Os02g26080 anther-specific proline-rich protein APG precursor, putative gene anther-specific proline-rich protein APG precursor, putative chr2 15304716 15306690 + promoter 9 LOC_Os02g45580 glucosyltransferase, putative gene glucosyltransferase, putative chr2 27726030 27726398 + promoter 9 LOC_Os11g41230 ATBPM6, putative gene ATBPM6, putative chr11 24258324 24258890 + promoter 9 LOC_Os08g16370 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr8 9984998 9989609 + promoter 9 LOC_Os09g35940 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr9 20690825 20692635 + promoter 9 LOC_Os03g01810 SNF7 domain containing protein, putative, expressed gene SNF7 domain containing protein, putative, expressed chr3 496749 498660 + promoter 9 LOC_Os01g13860 hypothetical protein gene hypothetical protein chr1 7770960 7773282 + promoter,downstream 9 LOC_Os06g06650 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 3120706 3121721 - promoter 9 LOC_Os01g28120 hypothetical protein gene hypothetical protein chr1 15742268 15742844 + promoter 9 LOC_Os02g36710 SET, putative, expressed gene SET, putative, expressed chr2 22145563 22150173 - promoter 9 LOC_Os04g19970 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr4 11123464 11124269 - promoter 9 LOC_Os03g39270 hypothetical protein gene hypothetical protein chr3 21814646 21816673 - promoter,downstream 9 LOC_Os01g71360 hypothetical protein gene hypothetical protein chr1 41350112 41351395 - promoter,downstream 9 LOC_Os02g56820 OsFBX69 - F-box domain containing protein, expressed gene OsFBX69 - F-box domain containing protein, expressed chr2 34815478 34820117 + promoter 9 LOC_Os01g72590 conserved hypothetical protein gene conserved hypothetical protein chr1 42109433 42109639 - promoter 9 LOC_Os01g57599 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 33301635 33303499 + promoter,downstream 9 LOC_Os11g25930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 14327748 14331776 + promoter 9 LOC_Os01g54460 hypothetical protein gene hypothetical protein chr1 31326278 31327213 - promoter 9 LOC_Os06g33450 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr6 19489532 19493503 + promoter,downstream 9 LOC_Os04g41630 hypothetical protein gene hypothetical protein chr4 24506391 24507050 + promoter,downstream 9 LOC_Os02g50700 expressed protein gene expressed protein chr2 30965708 30967020 + promoter 9 LOC_Os10g02620 GAGA-binding protein, putative, expressed gene GAGA-binding protein, putative, expressed chr10 999062 1001883 - promoter 9 LOC_Os06g39410 hypothetical protein gene hypothetical protein chr6 23400153 23400370 - promoter 9 LOC_Os09g28880 DUF617 domain containing protein, expressed gene DUF617 domain containing protein, expressed chr9 17549265 17552888 + promoter 9 LOC_Os12g38470 hypothetical protein gene hypothetical protein chr12 23581659 23582114 - promoter 9 LOC_Os03g49770 oxysterol-binding protein, putative, expressed gene oxysterol-binding protein, putative, expressed chr3 28323005 28332233 + promoter,downstream 9 LOC_Os07g02530 hypothetical protein gene hypothetical protein chr7 898100 898779 + promoter 9 LOC_Os09g25710 keratin, type I cytoskeletal 9, putative, expressed gene keratin, type I cytoskeletal 9, putative, expressed chr9 15425337 15425864 + promoter 9 LOC_Os03g19820 expressed protein gene expressed protein chr3 11155322 11155794 + promoter 9 LOC_Os11g06530 hypothetical protein gene hypothetical protein chr11 3146073 3146934 - promoter 9 LOC_Os08g07680 hypothetical protein gene hypothetical protein chr8 4296228 4296740 + promoter 9 LOC_Os01g51610 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr1 29636747 29641857 + promoter 9 LOC_Os01g56510 periplasmic beta-glucosidase precursor, putative, expressed gene periplasmic beta-glucosidase precursor, putative, expressed chr1 32579666 32585099 - promoter 9 LOC_Os12g43780 expressed protein gene expressed protein chr12 27157150 27158406 - promoter 9 LOC_Os05g05050 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 2454258 2459686 - promoter 9 LOC_Os09g38170 conserved hypothetical protein gene conserved hypothetical protein chr9 21985402 21986679 - promoter 9 LOC_Os10g34896 RIPER8 - Ripening-related family protein precursor gene RIPER8 - Ripening-related family protein precursor chr10 18557086 18557969 - promoter,downstream 9 LOC_Os03g59990 glucosyl transferase, putative gene glucosyl transferase, putative chr3 34116605 34117135 - promoter 9 LOC_Os03g43000 hypothetical protein gene hypothetical protein chr3 23979716 23979955 + promoter,downstream 9 LOC_Os03g22940 expressed protein gene expressed protein chr3 13255607 13256458 + promoter 9 LOC_Os11g42280 OsFBX433 - F-box domain containing protein gene OsFBX433 - F-box domain containing protein chr11 24998295 24999505 - promoter 9 LOC_Os05g09712 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 5486266 5488563 + promoter 9 LOC_Os12g27770 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr12 16367409 16370947 + promoter 9 LOC_Os06g44849 unknown gene unknown chr6 27101096 27101387 + promoter,downstream 9 LOC_Os08g33900 CAAX amino terminal protease family protein, putative gene CAAX amino terminal protease family protein, putative chr8 21205967 21208757 + promoter 9 LOC_Os07g33380 conserved hypothetical protein gene conserved hypothetical protein chr7 19956240 19957184 + promoter,downstream 9 LOC_Os07g06325 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 3071800 3072096 - promoter 9 LOC_Os06g08910 glutamate receptor 2.8 precursor, putative, expressed gene glutamate receptor 2.8 precursor, putative, expressed chr6 4488430 4492931 - promoter 9 LOC_Os01g10710 receptor-like protein kinase, putative gene receptor-like protein kinase, putative chr1 5730783 5733320 + promoter 9 LOC_Os01g24249 unknown gene unknown chr1 13665207 13665375 + promoter 9 LOC_Os11g38320 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 22228497 22230671 - promoter 9 LOC_Os06g38310 hypothetical protein gene hypothetical protein chr6 22671920 22673617 + promoter 9 LOC_Os08g07630 expressed protein gene expressed protein chr8 4282829 4283335 + promoter 9 LOC_Os10g39200 expressed protein gene expressed protein chr10 20858095 20863076 - promoter 9 LOC_Os04g43880 hypothetical protein gene hypothetical protein chr4 25804864 25808008 + promoter,downstream 9 LOC_Os05g37990 hypothetical protein gene hypothetical protein chr5 22227850 22228666 + promoter 9 LOC_Os10g18500 hypothetical protein gene hypothetical protein chr10 9319271 9319762 - promoter 9 LOC_Os05g11350 expressed protein gene expressed protein chr5 6414684 6416303 + promoter,downstream 9 LOC_Os09g38160 hypothetical protein gene hypothetical protein chr9 21980835 21981519 - promoter 9 LOC_Os07g34150 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 20426649 20431512 - promoter 9 LOC_Os07g03458 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1384404 1385096 + promoter 9 LOC_Os10g24890 hypothetical protein gene hypothetical protein chr10 12722868 12723917 - promoter 9 LOC_Os04g49320 tRNA-splicing endonuclease positive effector-related, putative, expressed gene tRNA-splicing endonuclease positive effector-related, putative, expressed chr4 29252764 29256780 - promoter 9 LOC_Os09g37670 hypothetical protein gene hypothetical protein chr9 21707386 21708868 - promoter 9 LOC_Os06g22160 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 12861431 12863379 - promoter 9 LOC_Os03g50630 hypothetical protein gene hypothetical protein chr3 28906470 28906760 + promoter 9 LOC_Os02g25030 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr2 14508321 14508554 + promoter 9 LOC_Os09g17070 hypothetical protein gene hypothetical protein chr9 10460248 10461402 - promoter,downstream 9 LOC_Os05g39500 DUF640 domain containing protein, putative, expressed gene DUF640 domain containing protein, putative, expressed chr5 23115646 23116362 + promoter,downstream 9 LOC_Os06g10330 myb-related protein 308, putative gene myb-related protein 308, putative chr6 5306467 5306748 + promoter 9 LOC_Os10g17900 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 8973369 8980548 - promoter 9 LOC_Os04g34500 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 20715338 20718689 - promoter 9 LOC_Os01g59400 hypothetical protein gene hypothetical protein chr1 34350337 34350816 - promoter 9 LOC_Os05g31000 nascent polypeptide-associated complex subunit alpha, putative, expressed gene nascent polypeptide-associated complex subunit alpha, putative, expressed chr5 17951786 17953904 + promoter 9 LOC_Os01g47370 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 27062848 27063123 - promoter,downstream 9 LOC_Os01g37460 zinc finger family protein, putative, expressed gene zinc finger family protein, putative, expressed chr1 20934744 20936401 + promoter 9 LOC_Os02g57700 protein kinase, putative, expressed gene protein kinase, putative, expressed chr2 35329087 35334952 + promoter 9 LOC_Os11g37660 vegetative storage protein, putative, expressed gene vegetative storage protein, putative, expressed chr11 21757522 21764913 - promoter 9 LOC_Os08g36540 aspartic proteinase nepenthesin-1 precursor, putative, expressed gene aspartic proteinase nepenthesin-1 precursor, putative, expressed chr8 23066590 23067890 + promoter 9 LOC_Os09g26050 ZOS9-09 - C2H2 zinc finger protein, expressed gene ZOS9-09 - C2H2 zinc finger protein, expressed chr9 15661120 15662011 + promoter 9 LOC_Os03g55040 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr3 31291751 31293894 + promoter 9 LOC_Os07g47220 hypothetical protein gene hypothetical protein chr7 28224777 28225187 + promoter 9 LOC_Os08g12280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 7225554 7229230 - promoter 9 LOC_Os10g20900 hypothetical protein gene hypothetical protein chr10 10517318 10518328 + promoter 9 LOC_Os11g15240 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 8597487 8601116 + promoter 9 LOC_Os05g23420 sugar porter, putative, expressed gene sugar porter, putative, expressed chr5 13316967 13325897 - promoter 9 LOC_Os06g13370 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 7362153 7365160 + promoter 9 LOC_Os08g27360 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 16703773 16707457 - promoter 9 LOC_Os05g40370 hypothetical protein gene hypothetical protein chr5 23658927 23661513 + promoter 9 LOC_Os11g10880 hypothetical protein gene hypothetical protein chr11 5994357 5994935 + promoter 9 LOC_Os07g25830 conserved hypothetical protein gene conserved hypothetical protein chr7 14829340 14830320 + promoter 9 LOC_Os09g26010 hypothetical protein gene hypothetical protein chr9 15634314 15634970 + promoter 9 LOC_Os07g41330 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed gene mitochondrial import inner membrane translocase subunit Tim17, putative, expressed chr7 24758388 24762554 - promoter,downstream 9 LOC_Os02g39384 hypothetical protein gene hypothetical protein chr2 23762557 23763296 - promoter 9 LOC_Os03g09210 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed gene NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed chr3 4806925 4809878 - promoter 9 LOC_Os06g42940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 25799398 25801231 + promoter 9 LOC_Os02g54700 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr2 33487552 33489978 + promoter 9 LOC_Os12g13920 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 7900477 7911265 + promoter 9 LOC_Os08g41210 expressed protein gene expressed protein chr8 26022000 26026187 + promoter 9 LOC_Os04g34470 hypothetical protein gene hypothetical protein chr4 20705279 20705737 + promoter 9 LOC_Os04g34030 U-box domain-containing protein, putative gene U-box domain-containing protein, putative chr4 20438188 20439543 - promoter,downstream 9 LOC_Os11g08250 DEFL30 - Defensin and Defensin-like DEFL family gene DEFL30 - Defensin and Defensin-like DEFL family chr11 4323671 4324000 + promoter,downstream 9 LOC_Os05g46740 regulator of chromosome condensation, putative, expressed gene regulator of chromosome condensation, putative, expressed chr5 26994739 27000573 - promoter 9 LOC_Os07g03337 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 1336977 1339802 + promoter 9 LOC_Os12g30930 conserved hypothetical protein gene conserved hypothetical protein chr12 18552799 18553478 + promoter,downstream 9 LOC_Os04g34530 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr4 20725609 20730927 + promoter 9 LOC_Os08g11470 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr8 6727269 6731892 + promoter 9 LOC_Os12g25150 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 14435735 14437452 - promoter 9 LOC_Os12g27994 expressed protein gene expressed protein chr12 16497492 16505181 - promoter 9 LOC_Os12g13010 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 7207778 7212195 + promoter 9 LOC_Os09g29720 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 18068119 18071439 - promoter 9 LOC_Os03g20980 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr3 11901539 11906103 - promoter 9 LOC_Os04g08094 unknown gene unknown chr4 4319779 4320310 - promoter 9 LOC_Os05g09728 expressed protein gene expressed protein chr5 5511817 5512833 - promoter 9 LOC_Os09g17650 expressed protein gene expressed protein chr9 10797018 10797388 + promoter,downstream 9 LOC_Os09g07294 purity of essence, putative, expressed gene purity of essence, putative, expressed chr9 3585600 3588801 - promoter 9 LOC_Os11g02760 histidine triad family protein, putative gene histidine triad family protein, putative chr11 904663 906832 + promoter 9 LOC_Os06g34470 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr6 20063669 20064172 + promoter 9 LOC_Os06g34190 hypothetical protein gene hypothetical protein chr6 19907065 19907945 - promoter 9 LOC_Os08g03620 tetratricopeptide repeat domain containing protein gene tetratricopeptide repeat domain containing protein chr8 1709029 1714016 - promoter 9 LOC_Os01g52694 unknown gene unknown chr1 30297526 30298049 + promoter 9 LOC_Os02g34010 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 20305513 20311085 - promoter 9 LOC_Os05g03750 expressed protein gene expressed protein chr5 1652004 1654363 + promoter 9 LOC_Os02g40910 hypothetical protein gene hypothetical protein chr2 24783662 24784196 - promoter,downstream 9 LOC_Os10g20820 hypothetical protein gene hypothetical protein chr10 10490267 10490632 + promoter,downstream 9 LOC_Os09g20160 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 12072452 12074493 - promoter,downstream 9 LOC_Os02g01230 ribosomal protein, putative, expressed gene ribosomal protein, putative, expressed chr2 126771 130189 - promoter 9 LOC_Os03g46052 hypothetical protein gene hypothetical protein chr3 26027258 26027872 + promoter 9 LOC_Os01g73720 RCLEA4 - Root cap and Late embryogenesis related family protein precursor, expressed gene RCLEA4 - Root cap and Late embryogenesis related family protein precursor, expressed chr1 42705480 42706937 + promoter,downstream 9 LOC_Os09g23580 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 14012383 14012973 - promoter 9 LOC_Os04g53720 SNF2 family N-terminal domain containing protein, expressed gene SNF2 family N-terminal domain containing protein, expressed chr4 31824369 31831300 - promoter 9 LOC_Os02g46370 hypothetical protein gene hypothetical protein chr2 28255716 28258232 + promoter 9 LOC_Os11g08170 DEFL45 - Defensin and Defensin-like DEFL family gene DEFL45 - Defensin and Defensin-like DEFL family chr11 4281014 4281400 + promoter,downstream 9 LOC_Os06g16830 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 9743691 9744196 + promoter 9 LOC_Os12g05980 DUF584 domain containing protein, putative, expressed gene DUF584 domain containing protein, putative, expressed chr12 2750807 2751655 + promoter 9 LOC_Os06g29790 phosphate transporter 1, putative, expressed gene phosphate transporter 1, putative, expressed chr6 17129056 17133976 + promoter 9 LOC_Os05g04730 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 2233710 2237932 + promoter 9 LOC_Os12g39010 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 23960185 23965124 + promoter,downstream 9 LOC_Os04g42230 hypothetical protein gene hypothetical protein chr4 24792068 24792718 - promoter,downstream 9 LOC_Os08g42480 expressed protein gene expressed protein chr8 26847750 26850329 + promoter,downstream 9 LOC_Os02g40720 hypothetical protein gene hypothetical protein chr2 24680916 24681711 - promoter 9 LOC_Os05g11960 hypothetical protein gene hypothetical protein chr5 6833065 6836308 - promoter 9 LOC_Os02g51290 HVA22, putative, expressed gene HVA22, putative, expressed chr2 31401276 31403855 + promoter 9 LOC_Os05g18880 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 10963856 10965785 + promoter 9 LOC_Os03g43540 hypothetical protein gene hypothetical protein chr3 24307018 24311620 - promoter 9 LOC_Os01g27080 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 15099871 15104893 - promoter 9 LOC_Os06g05284 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr6 2379596 2381938 + promoter 9 LOC_Os05g50040 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 28623276 28626188 + promoter 9 LOC_Os01g62200 domain of unknown function DUF966 domain containing protein, expressed gene domain of unknown function DUF966 domain containing protein, expressed chr1 36001213 36004058 - promoter 9 LOC_Os05g11260 expressed protein gene expressed protein chr5 6358038 6362346 - promoter 9 LOC_Os01g10450 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr1 5509516 5513480 - promoter 9 LOC_Os08g13110 hypothetical protein gene hypothetical protein chr8 7782346 7782846 - promoter 9 LOC_Os03g25370 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 14503526 14504661 + promoter 9 LOC_Os08g32380 expressed protein gene expressed protein chr8 20052332 20053937 + promoter,downstream 9 LOC_Os04g24840 glycosyltransferase, putative gene glycosyltransferase, putative chr4 14291160 14297359 - promoter 9 LOC_Os01g58370 hypothetical protein gene hypothetical protein chr1 33727264 33727506 + promoter 9 LOC_Os03g41154 hypothetical protein gene hypothetical protein chr3 22880916 22881116 - promoter,downstream 9 LOC_Os01g36470 hypothetical protein gene hypothetical protein chr1 20244346 20244972 - promoter,downstream 9 LOC_Os08g30410 hypothetical protein gene hypothetical protein chr8 18704472 18704885 + promoter,downstream 9 LOC_Os11g31770 expressed protein gene expressed protein chr11 18170245 18184695 + promoter,downstream 9 LOC_Os07g03700 hypothetical protein gene hypothetical protein chr7 1502465 1503284 - promoter 9 LOC_Os01g45310 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 25720028 25720753 + promoter 9 LOC_Os07g47480 heavy metal-associated domain containing protein, expressed gene heavy metal-associated domain containing protein, expressed chr7 28381565 28383153 + promoter 9 LOC_Os06g02250 MYB family transcription factor, putative gene MYB family transcription factor, putative chr6 715820 717015 + promoter 9 LOC_Os11g08880 hypothetical protein gene hypothetical protein chr11 4701168 4701798 + promoter 9 LOC_Os03g38880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 21602787 21606241 - promoter 9 LOC_Os11g43840 conserved hypothetical protein gene conserved hypothetical protein chr11 26008299 26008837 - promoter,downstream 9 LOC_Os03g49900 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr3 28441867 28449465 - promoter 9 LOC_Os05g39890 CBL-interacting serine/threonine-protein kinase 15, putative gene CBL-interacting serine/threonine-protein kinase 15, putative chr5 23375235 23375717 - promoter 9 LOC_Os06g38320 expressed protein gene expressed protein chr6 22698044 22704081 + promoter 9 LOC_Os12g42650 pollen preferential protein, putative, expressed gene pollen preferential protein, putative, expressed chr12 26472675 26473582 - promoter 9 LOC_Os11g07420 hypothetical protein gene hypothetical protein chr11 3729946 3731097 - promoter 9 LOC_Os07g05070 hypothetical protein gene hypothetical protein chr7 2234417 2235019 - promoter,downstream 9 LOC_Os07g05140 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 2268690 2273157 - promoter 9 LOC_Os03g12804 expressed protein gene expressed protein chr3 6862023 6870196 - promoter 9 LOC_Os08g44600 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 28043756 28047665 - promoter 9 LOC_Os07g40040 expressed protein gene expressed protein chr7 24033948 24034890 - promoter 9 LOC_Os02g46560 helix-loop-helix DNA-binding protein, putative, expressed gene helix-loop-helix DNA-binding protein, putative, expressed chr2 28384301 28387379 + promoter 9 LOC_Os05g50680 expressed protein gene expressed protein chr5 28988638 28989792 + promoter 9 LOC_Os12g26600 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 15573376 15575586 - promoter 9 LOC_Os04g54610 hypothetical protein gene hypothetical protein chr4 32291504 32292471 + promoter 9 LOC_Os10g01500 expressed protein gene expressed protein chr10 320039 320388 - promoter 9 LOC_Os04g29350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 17253216 17265177 - promoter 9 LOC_Os07g05040 cadmium-induced protein, putative, expressed gene cadmium-induced protein, putative, expressed chr7 2221929 2223917 - promoter 9 LOC_Os08g01530 expressed protein gene expressed protein chr8 320888 322000 - promoter,downstream 9 LOC_Os06g46420 hypothetical protein gene hypothetical protein chr6 28171763 28172389 - promoter,downstream 9 LOC_Os03g16790 DHHC zinc finger domain containing protein, expressed gene DHHC zinc finger domain containing protein, expressed chr3 9306446 9311616 + promoter 9 LOC_Os05g02740 expressed protein gene expressed protein chr5 986254 988504 + promoter 9 LOC_Os05g15700 hypothetical protein gene hypothetical protein chr5 8873997 8874588 - promoter 9 LOC_Os10g34760 RIPER3 - Ripening-related family protein precursor, putative gene RIPER3 - Ripening-related family protein precursor, putative chr10 18489489 18489992 - promoter 9 LOC_Os10g01940 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 593572 596378 + promoter 9 LOC_Os12g29830 hypothetical protein gene hypothetical protein chr12 17796489 17799486 + promoter 9 LOC_Os06g12710 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 6937496 6943387 + promoter 9 LOC_Os07g28790 PAP fibrillin family domain containing protein, expressed gene PAP fibrillin family domain containing protein, expressed chr7 16856199 16861650 + promoter 9 LOC_Os06g35150 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr6 20471293 20474639 - promoter,downstream 9 LOC_Os03g26420 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr3 15095764 15096426 + promoter 9 LOC_Os04g54910 hypothetical protein gene hypothetical protein chr4 32481316 32481753 - promoter 9 LOC_Os08g10220 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 5929714 5931452 + promoter 9 LOC_Os11g45790 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr11 27232148 27235697 - promoter 9 LOC_Os08g11210 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr8 6585970 6586834 - promoter 9 LOC_Os07g34200 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 20457082 20460779 - promoter 9 LOC_Os04g34100 expressed protein gene expressed protein chr4 20481729 20485329 + promoter 9 LOC_Os11g39760 hypothetical protein gene hypothetical protein chr11 23237651 23238073 + promoter,downstream 9 LOC_Os08g42500 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 26860676 26862660 + promoter,downstream 9 LOC_Os05g46480 late embryogenesis abundant protein, group 3, putative, expressed gene late embryogenesis abundant protein, group 3, putative, expressed chr5 26864964 26866259 + promoter 9 LOC_Os08g43100 hypothetical protein gene hypothetical protein chr8 27244179 27244514 + promoter 9 LOC_Os12g27480 conserved hypothetical protein gene conserved hypothetical protein chr12 16167263 16168012 - promoter 9 LOC_Os07g14610 IAA-amino acid hydrolase ILR1-like 6 precursor, putative, expressed gene IAA-amino acid hydrolase ILR1-like 6 precursor, putative, expressed chr7 8333374 8334727 - promoter 9 LOC_Os09g08280 expressed protein gene expressed protein chr9 4276193 4276778 - promoter 9 LOC_Os11g03150 retrotransposon protein, putative, SINE subclass gene retrotransposon protein, putative, SINE subclass chr11 1132890 1133960 + promoter 9 LOC_Os04g47260 expressed protein gene expressed protein chr4 27879858 27881842 + promoter 9 LOC_Os08g35500 hypothetical protein gene hypothetical protein chr8 22362334 22362959 - promoter 9 LOC_Os04g11200 hypothetical protein gene hypothetical protein chr4 6092654 6093183 - promoter 9 LOC_Os12g06480 PHD-finger family protein, expressed gene PHD-finger family protein, expressed chr12 3117030 3123782 - promoter 9 LOC_Os10g21600 hypothetical protein gene hypothetical protein chr10 10987386 10988738 + promoter 9 LOC_Os06g50620 conserved hypothetical protein gene conserved hypothetical protein chr6 30637239 30638755 - promoter 9 LOC_Os10g01150 hypothetical protein gene hypothetical protein chr10 116752 117419 - promoter 9 LOC_Os06g17230 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 9977198 9982699 + promoter 9 LOC_Os08g36960 OsFBX296 - F-box domain containing protein, expressed gene OsFBX296 - F-box domain containing protein, expressed chr8 23379090 23380864 + promoter 9 LOC_Os10g42850 OsWRKY2 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY2 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr10 23035975 23037118 + promoter 9 LOC_Os12g04090 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr12 1714125 1714743 + promoter 9 LOC_Os08g42180 conserved hypothetical protein gene conserved hypothetical protein chr8 26645129 26645812 - promoter 9 LOC_Os03g21220 hypothetical protein gene hypothetical protein chr3 12109195 12109692 - promoter 9 LOC_Os02g26480 OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed gene OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed chr2 15543428 15552430 - promoter 9 LOC_Os03g20320 hypothetical protein gene hypothetical protein chr3 11486898 11487281 - promoter 9 LOC_Os04g13300 hypothetical protein gene hypothetical protein chr4 7386904 7387820 + promoter 9 LOC_Os01g52750 OsSub3 - Putative Subtilisin homologue, expressed gene OsSub3 - Putative Subtilisin homologue, expressed chr1 30343035 30347971 - promoter 9 LOC_Os02g05199 expressed protein gene expressed protein chr2 2486463 2488965 + promoter 9 LOC_Os07g10600 cycloartenol-C-24-methyltransferase 1, putative, expressed gene cycloartenol-C-24-methyltransferase 1, putative, expressed chr7 5749882 5755708 - promoter 9 LOC_Os02g11120 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 5962254 5963919 + promoter 9 LOC_Os06g05560 expressed protein gene expressed protein chr6 2517213 2519939 + promoter 9 LOC_Os12g35870 hypothetical protein gene hypothetical protein chr12 21823690 21823935 - promoter 9 LOC_Os09g23430 hypothetical protein gene hypothetical protein chr9 13924466 13924666 + promoter,downstream 9 LOC_Os03g40600 cytochrome P450 78A11, putative, expressed gene cytochrome P450 78A11, putative, expressed chr3 22566159 22567174 - promoter 9 LOC_Os11g39550 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr11 23099106 23109359 - promoter 9 LOC_Os07g38880 hypothetical protein gene hypothetical protein chr7 23323512 23323877 - promoter 9 LOC_Os01g14190 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 7946393 7948803 + promoter 9 LOC_Os10g32580 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr10 16999690 17001393 + promoter 9 LOC_Os05g45220 50S ribosomal protein L20, putative, expressed gene 50S ribosomal protein L20, putative, expressed chr5 26186931 26188716 - promoter,downstream 9 LOC_Os10g40450 hypothetical protein gene hypothetical protein chr10 21593684 21594166 + promoter,downstream 9 LOC_Os11g11262 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 6228443 6229553 + promoter 9 LOC_Os12g12240 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr12 6719650 6723790 + promoter 9 LOC_Os07g05660 hypothetical protein gene hypothetical protein chr7 2694011 2696712 + promoter 9 LOC_Os12g11980 hypothetical protein gene hypothetical protein chr12 6562776 6562982 - promoter,downstream 9 LOC_Os09g38640 IBR domain containing protein, putative, expressed gene IBR domain containing protein, putative, expressed chr9 22222559 22224335 - promoter 9 LOC_Os04g39780 AMP-binding enzyme family protein, expressed gene AMP-binding enzyme family protein, expressed chr4 23513519 23522205 - promoter 9 LOC_Os05g42436 hypothetical protein gene hypothetical protein chr5 24846745 24847466 + promoter,downstream 9 LOC_Os06g34120 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr6 19865073 19869009 - promoter 9 LOC_Os09g26490 alpha/beta hydrolase fold, putative gene alpha/beta hydrolase fold, putative chr9 16008645 16009892 + promoter 9 LOC_Os08g40050 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr8 25357755 25360863 - promoter 9 LOC_Os04g46360 hypothetical protein gene hypothetical protein chr4 27301789 27302649 - promoter 9 LOC_Os02g37400 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 22583257 22583860 - promoter 9 LOC_Os10g34057 unknown gene unknown chr10 18104574 18104863 - promoter 9 LOC_Os04g55250 expressed protein gene expressed protein chr4 32670511 32671999 + promoter 9 LOC_Os09g08340 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 4309675 4314365 + promoter 9 LOC_Os05g46540 hypothetical protein gene hypothetical protein chr5 26887626 26888913 + promoter 9 LOC_Os11g43230 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 25606267 25609835 - promoter,downstream 9 LOC_Os08g44730 hypothetical protein gene hypothetical protein chr8 28108160 28108595 + promoter,downstream 9 LOC_Os05g48120 hypothetical protein gene hypothetical protein chr5 27522130 27525561 - promoter 9 LOC_Os01g16480 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 9351425 9358376 + promoter 9 LOC_Os11g30010 NB-ARC domain containing protein gene NB-ARC domain containing protein chr11 16987221 16989064 - promoter 9 LOC_Os07g02840 PS60, putative gene PS60, putative chr7 1063207 1064710 + promoter 9 LOC_Os07g14350 methyltransferase, putative, expressed gene methyltransferase, putative, expressed chr7 8193029 8198892 + promoter 9 LOC_Os01g60520 WRKY DNA-binding domain containing protein gene WRKY DNA-binding domain containing protein chr1 34995749 35002183 + promoter 9 LOC_Os03g44270 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr3 24881873 24884763 + promoter 9 LOC_Os03g10270 conserved hypothetical protein gene conserved hypothetical protein chr3 5231848 5232654 + promoter 9 LOC_Os04g33540 conserved hypothetical protein gene conserved hypothetical protein chr4 20114135 20115016 + promoter 9 LOC_Os01g46730 hypothetical protein gene hypothetical protein chr1 26618418 26619190 + promoter 9 LOC_Os08g01410 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed gene phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed chr8 267716 271077 - promoter 9 LOC_Os03g28190 dirigent, putative, expressed gene dirigent, putative, expressed chr3 16226305 16226838 - promoter 9 LOC_Os12g26950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 15778274 15780607 - promoter,downstream 9 LOC_Os08g04710 expressed protein gene expressed protein chr8 2343015 2343750 - promoter 9 LOC_Os11g31020 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr11 17576109 17580053 - promoter,downstream 9 LOC_Os06g06560 starch synthase, putative, expressed gene starch synthase, putative, expressed chr6 3078060 3085809 - promoter 9 LOC_Os03g07660 conserved hypothetical protein gene conserved hypothetical protein chr3 3892043 3892405 - promoter 9 LOC_Os07g12255 expressed protein gene expressed protein chr7 6879888 6883364 + promoter 9 LOC_Os08g03420 kelch repeat protein, putative, expressed gene kelch repeat protein, putative, expressed chr8 1599718 1603908 + promoter 9 LOC_Os03g38355 GSDL-motif lipase, putative gene GSDL-motif lipase, putative chr3 21279722 21280492 - promoter,downstream 9 LOC_Os01g27110 hypothetical protein gene hypothetical protein chr1 15115395 15115892 + promoter,downstream 9 LOC_Os02g05460 expressed protein gene expressed protein chr2 2631738 2632109 - promoter,downstream 9 LOC_Os09g15530 hypothetical protein gene hypothetical protein chr9 9496190 9497538 - promoter 9 LOC_Os06g02970 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 1092764 1093351 + promoter 9 LOC_Os08g35080 hypothetical protein gene hypothetical protein chr8 22106686 22107026 - promoter 9 LOC_Os05g15310 hypothetical protein gene hypothetical protein chr5 8679624 8679950 - promoter,downstream 9 LOC_Os05g13500 hypothetical protein gene hypothetical protein chr5 7481877 7483720 + promoter 9 LOC_Os05g01930 hypothetical protein gene hypothetical protein chr5 529512 531131 + promoter 9 LOC_Os01g14400 hypothetical protein gene hypothetical protein chr1 8059358 8059852 - promoter 9 LOC_Os04g54880 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 32458391 32462344 + promoter 9 LOC_Os01g36790 TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed chr1 20463561 20468204 - promoter 9 LOC_Os04g19810 OsFBL12 - F-box domain and LRR containing protein, expressed gene OsFBL12 - F-box domain and LRR containing protein, expressed chr4 11053200 11054785 + promoter 9 LOC_Os08g08900 hypothetical protein gene hypothetical protein chr8 5176491 5177278 + promoter 9 LOC_Os02g45290 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 27508247 27508780 - promoter 9 LOC_Os03g08890 hypothetical protein gene hypothetical protein chr3 4602818 4603104 - promoter 9 LOC_Os04g23910 OsMADS25 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS25 - MADS-box family gene with MIKCc type-box, expressed chr4 13663424 13666598 + promoter 9 LOC_Os09g29700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 18058643 18063517 + promoter 9 LOC_Os12g38160 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr12 23396535 23397786 - promoter 9 LOC_Os04g38450 gamma-glutamyltranspeptidase 1 precursor, putative, expressed gene gamma-glutamyltranspeptidase 1 precursor, putative, expressed chr4 22670244 22675891 - promoter 9 LOC_Os07g28660 ice-structuring glycoprotein precursor, putative, expressed gene ice-structuring glycoprotein precursor, putative, expressed chr7 16774201 16774828 - promoter 9 LOC_Os06g12220 HVA22, putative, expressed gene HVA22, putative, expressed chr6 6558754 6562395 - promoter 9 LOC_Os08g36630 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed gene bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed chr8 23114315 23116781 - promoter,downstream 9 LOC_Os05g32740 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr5 19109969 19111871 + promoter 9 LOC_Os11g47970 AAA-type ATPase family protein, putative, expressed gene AAA-type ATPase family protein, putative, expressed chr11 28411073 28413119 - promoter,downstream 9 LOC_Os07g39240 expressed protein gene expressed protein chr7 23490420 23494077 - promoter 9 LOC_Os05g39950 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr5 23414486 23416271 + promoter 9 LOC_Os09g30414 aspartic proteinase nepenthesin-2 precursor, putative, expressed gene aspartic proteinase nepenthesin-2 precursor, putative, expressed chr9 18520579 18523732 + promoter 9 LOC_Os10g10810 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr10 5995858 6001968 + promoter 9 LOC_Os07g48060 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 28689616 28691648 - promoter 9 LOC_Os02g12680 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 6628383 6630103 + promoter 9 LOC_Os03g01720 protein binding protein, putative gene protein binding protein, putative chr3 451397 458303 + promoter 9 LOC_Os07g37630 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr7 22559504 22563706 + promoter 9 LOC_Os08g38730 expressed protein gene expressed protein chr8 24489709 24490173 + promoter 9 LOC_Os01g11800 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 6381881 6382687 - promoter 9 LOC_Os10g23840 conserved hypothetical protein gene conserved hypothetical protein chr10 12153784 12154125 + promoter 9 LOC_Os04g58980 pentatricopeptide, putative gene pentatricopeptide, putative chr4 34899372 34903900 - promoter 9 LOC_Os03g41170 expressed protein gene expressed protein chr3 22890885 22894047 - promoter 9 LOC_Os07g12010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 6670142 6670396 - promoter 9 LOC_Os07g25810 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 14823059 14824742 - promoter,downstream 9 LOC_Os06g05180 coatomer subunit beta, putative, expressed gene coatomer subunit beta, putative, expressed chr6 2319806 2328667 - promoter 9 LOC_Os03g01610 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 385871 387098 + promoter 9 LOC_Os02g51700 expressed protein gene expressed protein chr2 31667275 31669421 + promoter 9 LOC_Os06g22130 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 12840886 12841606 - promoter 9 LOC_Os07g03130 PDV2, putative, expressed gene PDV2, putative, expressed chr7 1198188 1200376 - promoter 9 LOC_Os01g21720 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 12186924 12188317 - promoter 9 LOC_Os01g50730 conserved hypothetical protein gene conserved hypothetical protein chr1 29144648 29147061 - promoter 9 LOC_Os07g28150 hAT dimerisation domain containing protein, putative gene hAT dimerisation domain containing protein, putative chr7 16435745 16436212 - promoter 9 LOC_Os11g34030 hypothetical protein gene hypothetical protein chr11 19422457 19423793 - promoter 9 LOC_Os01g68310 sas10/Utp3 family protein gene sas10/Utp3 family protein chr1 39683879 39685964 - promoter 9 LOC_Os09g29270 expressed protein gene expressed protein chr9 17772260 17773353 - promoter 9 LOC_Os11g08270 DEFL32 - Defensin and Defensin-like DEFL family gene DEFL32 - Defensin and Defensin-like DEFL family chr11 4332396 4332910 + promoter 9 LOC_Os07g03368 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1351321 1351930 + promoter 9 LOC_Os10g33954 hypothetical protein gene hypothetical protein chr10 18009460 18009765 - promoter 9 LOC_Os06g10790 lectin-like receptor kinase, putative, expressed gene lectin-like receptor kinase, putative, expressed chr6 5632355 5634722 - promoter 9 LOC_Os01g27620 hypothetical protein gene hypothetical protein chr1 15404255 15405227 + promoter 9 LOC_Os08g30430 conserved hypothetical protein gene conserved hypothetical protein chr8 18727258 18727764 + promoter,downstream 9 LOC_Os02g34910 hypothetical protein gene hypothetical protein chr2 20941586 20942223 - promoter 9 LOC_Os01g14410 early light-induced protein, chloroplast precursor, putative, expressed gene early light-induced protein, chloroplast precursor, putative, expressed chr1 8060858 8061908 + promoter 9 LOC_Os12g41590 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed gene oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed chr12 25704396 25707500 - promoter 9 LOC_Os02g06940 conserved hypothetical protein gene conserved hypothetical protein chr2 3517161 3519872 - promoter 9 LOC_Os01g72820 CRS1/YhbY domain containing protein, putative, expressed gene CRS1/YhbY domain containing protein, putative, expressed chr1 42239742 42244204 + promoter 9 LOC_Os02g38110 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 23031320 23032432 - promoter 9 LOC_Os01g54714 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 31479726 31485681 + promoter 9 LOC_Os04g46150 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 27154909 27155838 + promoter,downstream 9 LOC_Os06g41940 expressed protein gene expressed protein chr6 25171044 25171896 + promoter 9 LOC_Os04g56220 hypothetical protein gene hypothetical protein chr4 33336263 33337526 - promoter 9 LOC_Os05g34410 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 20333352 20334283 - promoter 9 LOC_Os03g54830 hypothetical protein gene hypothetical protein chr3 31161434 31161895 + promoter 9 LOC_Os04g49730 invertase/pectin methylesterase inhibitor family protein, putative gene invertase/pectin methylesterase inhibitor family protein, putative chr4 29470960 29471520 + promoter 9 LOC_Os05g50080 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed gene zinc finger C-x8-C-x5-C-x3-H type family protein, expressed chr5 28639588 28641862 + promoter 9 LOC_Os11g16360 hypothetical protein gene hypothetical protein chr11 9020003 9020224 - promoter 9 LOC_Os06g16660 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 9588785 9592072 + promoter 9 LOC_Os05g04830 expressed protein gene expressed protein chr5 2325813 2328017 + promoter 9 LOC_Os11g16380 hypothetical protein gene hypothetical protein chr11 9041206 9041469 - promoter 9 LOC_Os11g39010 expressed protein gene expressed protein chr11 22759193 22760500 - promoter 9 LOC_Os05g06260 Spc97 / Spc98 family protein, putative, expressed gene Spc97 / Spc98 family protein, putative, expressed chr5 3181542 3188192 - promoter 9 LOC_Os12g29610 conserved hypothetical protein gene conserved hypothetical protein chr12 17655409 17659727 - promoter 9 LOC_Os08g03480 MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 1631240 1632142 + promoter 9 LOC_Os03g10670 hypothetical protein gene hypothetical protein chr3 5452412 5452822 - promoter 9 LOC_Os03g18340 transcription factor like protein, putative gene transcription factor like protein, putative chr3 10275958 10276725 + promoter 9 LOC_Os02g50210 erwinia induced protein 2, putative, expressed gene erwinia induced protein 2, putative, expressed chr2 30652555 30653482 + promoter 9 LOC_Os06g35870 lectin protein kinase family protein, putative gene lectin protein kinase family protein, putative chr6 20928243 20930165 + promoter 9 LOC_Os01g08209 unknown gene unknown chr1 4000421 4000614 + promoter,downstream 9 LOC_Os03g07540 bHLH family protein, putative gene bHLH family protein, putative chr3 3844709 3845273 + promoter 9 LOC_Os04g21360 hypothetical protein gene hypothetical protein chr4 12056599 12058253 + promoter 9 LOC_Os11g05520 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed gene bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed chr11 2485289 2485837 + promoter 9 LOC_Os12g41120 hypothetical protein gene hypothetical protein chr12 25432148 25432603 + promoter 9 LOC_Os03g31790 hypothetical protein gene hypothetical protein chr3 18182012 18182302 + promoter 9 LOC_Os12g44200 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 27384508 27388587 + promoter 9 LOC_Os04g39814 Os4bglu9 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed gene Os4bglu9 - beta-glucosidase homologue, similar to Os4Bglu12 exoglucanase/beta-glucosidase, expressed chr4 23530300 23536588 - promoter 9 LOC_Os10g03360 transferase family protein, putative gene transferase family protein, putative chr10 1430119 1431384 + promoter 9 LOC_Os02g08030 aldose 1-epimerase, putative gene aldose 1-epimerase, putative chr2 4220947 4223596 - promoter 9 LOC_Os03g02910 hypothetical protein gene hypothetical protein chr3 1167003 1167428 - promoter,downstream 9 LOC_Os01g12640 expressed protein gene expressed protein chr1 6956017 6957745 - promoter 9 LOC_Os07g39830 expressed protein gene expressed protein chr7 23883630 23886183 + promoter 9 LOC_Os05g51830 ZOS5-12 - C2H2 zinc finger protein, expressed gene ZOS5-12 - C2H2 zinc finger protein, expressed chr5 29690716 29693680 - promoter 9 LOC_Os03g48570 expressed protein gene expressed protein chr3 27684503 27686203 + promoter,downstream 9 LOC_Os05g01690 expressed protein gene expressed protein chr5 411095 419540 + promoter 9 LOC_Os09g36400 hypothetical protein gene hypothetical protein chr9 21002611 21006961 + promoter 9 LOC_Os04g55590 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr4 32910475 32911354 - promoter,downstream 9 LOC_Os10g22780 hypothetical protein gene hypothetical protein chr10 11769952 11771801 + promoter,downstream 9 LOC_Os11g29430 hypothetical protein gene hypothetical protein chr11 16621773 16622862 - promoter 9 LOC_Os09g37990 hypothetical protein gene hypothetical protein chr9 21898382 21899005 - promoter 9 LOC_Os05g12094 hypothetical protein gene hypothetical protein chr5 6921918 6922462 + promoter 9 LOC_Os11g02360 hypothetical protein gene hypothetical protein chr11 685087 686482 - promoter 9 LOC_Os07g12090 LTPL165 - Protease inhibitor/seed storage/LTP family protein precursor gene LTPL165 - Protease inhibitor/seed storage/LTP family protein precursor chr7 6745866 6746168 - promoter,downstream 9 LOC_Os03g08420 hypothetical protein gene hypothetical protein chr3 4318779 4321505 + promoter 9 LOC_Os01g60770 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr1 35144473 35146295 + promoter 9 LOC_Os03g45360 hypothetical protein gene hypothetical protein chr3 25606428 25607095 + promoter 9 LOC_Os02g10150 bZIP transcription factor, putative gene bZIP transcription factor, putative chr2 5321781 5322421 + promoter 9 LOC_Os08g34400 hypothetical protein gene hypothetical protein chr8 21596202 21600183 + promoter 9 LOC_Os06g24160 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 14137265 14144575 - promoter 9 LOC_Os04g30470 U-box domain-containing protein, putative gene U-box domain-containing protein, putative chr4 18028932 18032097 - promoter 9 LOC_Os11g40490 MBTB63 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB63 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr11 23695890 23698806 + promoter 9 LOC_Os12g34720 hypothetical protein gene hypothetical protein chr12 21049439 21051528 + promoter 9 LOC_Os03g62850 AMP-binding enzyme, putative, expressed gene AMP-binding enzyme, putative, expressed chr3 35542033 35550917 - promoter 9 LOC_Os07g01570 conserved hypothetical protein gene conserved hypothetical protein chr7 357463 357921 - promoter 9 LOC_Os01g29250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16393654 16396739 - promoter 9 LOC_Os11g39960 hypothetical protein gene hypothetical protein chr11 23353505 23353996 + promoter,downstream 9 LOC_Os06g39420 hypothetical protein gene hypothetical protein chr6 23404705 23406362 + promoter,downstream 9 LOC_Os07g29000 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 17010434 17013325 + promoter 9 LOC_Os06g04550 hypothetical protein gene hypothetical protein chr6 1967626 1970807 + promoter,downstream 9 LOC_Os03g12500 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr3 6607577 6609598 + promoter 9 LOC_Os08g01270 protein kinase family protein, putative, expressed gene protein kinase family protein, putative, expressed chr8 171050 178450 - promoter 9 LOC_Os09g12410 hAT dimerisation domain-containing protein, putative gene hAT dimerisation domain-containing protein, putative chr9 7094651 7096308 + promoter 9 LOC_Os03g10830 hypothetical protein gene hypothetical protein chr3 5556978 5557741 - promoter 9 LOC_Os10g02010 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 634293 638005 - promoter 9 LOC_Os04g29290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 17193857 17196131 - promoter 9 LOC_Os03g41019 hypothetical protein gene hypothetical protein chr3 22799628 22800093 + promoter 9 LOC_Os02g33470 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr2 19898922 19901092 + promoter 9 LOC_Os01g45640 tat pathway signal sequence family protein, expressed gene tat pathway signal sequence family protein, expressed chr1 25925192 25927165 + promoter,downstream 9 LOC_Os06g04870 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr6 2136451 2138102 + promoter 9 LOC_Os10g30500 hypothetical protein gene hypothetical protein chr10 15790118 15790384 - promoter 9 LOC_Os04g55990 hypothetical protein gene hypothetical protein chr4 33164556 33164962 + promoter 9 LOC_Os07g06750 VQ domain containing protein, putative gene VQ domain containing protein, putative chr7 3295841 3296368 + promoter,downstream 9 LOC_Os09g20300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 12177514 12179364 + promoter 9 LOC_Os04g29469 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 17344937 17355139 + promoter 9 LOC_Os05g27560 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 15972881 15982690 - promoter 9 LOC_Os11g04290 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr11 1774408 1776731 + promoter 9 LOC_Os02g27389 unknown gene unknown chr2 16141077 16141953 + promoter 9 LOC_Os10g21550 hypothetical protein gene hypothetical protein chr10 10962762 10962983 + promoter 9 LOC_Os06g11010 eukaryotic aspartyl protease domain containing protein gene eukaryotic aspartyl protease domain containing protein chr6 5758686 5760519 + promoter 9 LOC_Os02g05810 expressed protein gene expressed protein chr2 2865046 2869031 + promoter 9 LOC_Os02g30900 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr2 18440134 18444643 + promoter 9 LOC_Os09g33660 hypothetical protein gene hypothetical protein chr9 19876986 19877242 + promoter 9 LOC_Os10g29460 conserved hypothetical protein gene conserved hypothetical protein chr10 15231364 15232035 + promoter 9 LOC_Os08g40140 geranylgeranyl transferase type-2 subunit beta, putative, expressed gene geranylgeranyl transferase type-2 subunit beta, putative, expressed chr8 25398534 25401928 + promoter 9 LOC_Os05g38090 hypothetical protein gene hypothetical protein chr5 22271990 22272744 - promoter 9 LOC_Os11g33180 OsFBL56 - F-box domain and LRR containing protein gene OsFBL56 - F-box domain and LRR containing protein chr11 19163352 19165219 + promoter 9 LOC_Os09g09310 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 4982025 4982288 + promoter 9 LOC_Os11g17590 hypothetical protein gene hypothetical protein chr11 9784773 9785360 + promoter 9 LOC_Os02g32330 expressed protein gene expressed protein chr2 19082554 19083893 + promoter 9 LOC_Os01g47000 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 26835444 26841491 + promoter 9 LOC_Os11g25874 hypothetical protein gene hypothetical protein chr11 14284281 14285696 + promoter 9 LOC_Os07g04940 uncharacterized PE-PGRS family protein PE_PGRS54 precursor, putative gene uncharacterized PE-PGRS family protein PE_PGRS54 precursor, putative chr7 2178673 2180139 - promoter,downstream 9 LOC_Os10g08780 expressed protein gene expressed protein chr10 4774050 4774705 + promoter 9 LOC_Os05g15320 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 8680563 8683713 + promoter 9 LOC_Os06g39400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 23381208 23387390 - promoter 9 LOC_Os05g39460 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 23084781 23088481 - promoter 9 LOC_Os01g52420 conserved hypothetical protein gene conserved hypothetical protein chr1 30118966 30119196 + promoter 9 LOC_Os05g28140 conserved hypothetical protein gene conserved hypothetical protein chr5 16403880 16404548 - promoter 9 LOC_Os01g70740 expressed protein gene expressed protein chr1 40946028 40948550 - promoter 9 LOC_Os11g05650 mRNA-decapping enzyme, putative, expressed gene mRNA-decapping enzyme, putative, expressed chr11 2561056 2564407 + promoter 9 LOC_Os11g47574 expressed protein gene expressed protein chr11 28226169 28227178 + promoter 9 LOC_Os06g50980 conserved hypothetical protein gene conserved hypothetical protein chr6 30854272 30855123 + promoter,downstream 9 LOC_Os03g38870 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr3 21598187 21599302 + promoter,downstream 9 LOC_Os11g03840 D-mannose binding lectin family protein, expressed gene D-mannose binding lectin family protein, expressed chr11 1521024 1523817 - promoter 9 LOC_Os07g32520 hypothetical protein gene hypothetical protein chr7 19369060 19369819 + promoter,downstream 9 LOC_Os08g08330 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 4779946 4780789 + promoter 9 LOC_Os03g24820 expressed protein gene expressed protein chr3 14142678 14145352 + promoter 9 LOC_Os09g22160 hypothetical protein gene hypothetical protein chr9 13415253 13416210 + promoter 9 LOC_Os01g61300 hypothetical protein gene hypothetical protein chr1 35465373 35465771 + promoter,downstream 9 LOC_Os06g06750 OsMADS5 - MADS-box family gene with MIKCc type-box, expressed gene OsMADS5 - MADS-box family gene with MIKCc type-box, expressed chr6 3161802 3168416 - promoter 9 LOC_Os07g09370 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr7 4934900 4936915 + promoter 9 LOC_Os03g27560 hypothetical protein gene hypothetical protein chr3 15804913 15805769 - promoter,downstream 9 LOC_Os07g06030 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 2922358 2926103 - promoter 9 LOC_Os02g34260 AP2 domain containing protein gene AP2 domain containing protein chr2 20485245 20486000 - promoter,downstream 9 LOC_Os10g30510 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 15792741 15797102 + promoter 9 LOC_Os01g48740 aspartyl protease family protein, putative, expressed gene aspartyl protease family protein, putative, expressed chr1 27955609 27956544 + promoter 9 LOC_Os10g31550 hypothetical protein gene hypothetical protein chr10 16451271 16451690 - promoter 9 LOC_Os06g23430 signal recognition particle 19 kDa protein, putative, expressed gene signal recognition particle 19 kDa protein, putative, expressed chr6 13676378 13680876 - promoter 9 LOC_Os10g42500 PAP fibrillin family domain containing protein, expressed gene PAP fibrillin family domain containing protein, expressed chr10 22848991 22851926 + promoter 9 LOC_Os02g13620 expressed protein gene expressed protein chr2 7310420 7310992 + promoter 9 LOC_Os02g30290 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 18005548 18013551 - promoter 9 LOC_Os09g17010 lectin-like receptor kinase 1, putative gene lectin-like receptor kinase 1, putative chr9 10406388 10409702 + promoter,downstream 9 LOC_Os09g32930 retrotransposon protein, putative, SINE subclass, expressed gene retrotransposon protein, putative, SINE subclass, expressed chr9 19620213 19628287 + promoter 9 LOC_Os03g46150 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 26094061 26095030 + promoter,downstream 9 LOC_Os03g25030 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr3 14288281 14292005 + promoter,downstream 9 LOC_Os09g25640 5-nucleotidase domain-containing protein, putative, expressed gene 5-nucleotidase domain-containing protein, putative, expressed chr9 15399687 15405413 + promoter 9 LOC_Os07g39710 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed gene NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed chr7 23796960 23801662 - promoter 9 LOC_Os03g62680 hypothetical protein gene hypothetical protein chr3 35463153 35466824 - promoter 9 LOC_Os09g31990 expressed protein gene expressed protein chr9 19088295 19088991 + promoter 9 LOC_Os01g73220 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 42444957 42446610 + promoter 9 LOC_Os01g23460 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 13179281 13181762 + promoter 9 LOC_Os03g17359 conserved hypothetical protein gene conserved hypothetical protein chr3 9657437 9658579 - promoter 9 LOC_Os03g53350 anthocyanin 3-O-beta-glucosyltransferase, putative gene anthocyanin 3-O-beta-glucosyltransferase, putative chr3 30602871 30604337 - promoter 9 LOC_Os07g37980 cytochrome P450 51, putative gene cytochrome P450 51, putative chr7 22787938 22790193 + promoter 9 LOC_Os05g31890 aspartyl protease family protein, putative, expressed gene aspartyl protease family protein, putative, expressed chr5 18501378 18503007 - promoter 9 LOC_Os05g50280 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr5 28756797 28761720 - promoter 9 LOC_Os01g62460 ZOS1-16 - C2H2 zinc finger protein, expressed gene ZOS1-16 - C2H2 zinc finger protein, expressed chr1 36157175 36160493 + promoter 9 LOC_Os10g24350 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 12404788 12405501 + promoter 9 LOC_Os06g10710 expressed protein gene expressed protein chr6 5587197 5593758 + promoter 9 LOC_Os04g28330 hypothetical protein gene hypothetical protein chr4 16595501 16595710 + promoter,downstream 9 LOC_Os05g49790 DUF538 domain containing protein, putative, expressed gene DUF538 domain containing protein, putative, expressed chr5 28515402 28515853 - promoter 9 LOC_Os01g45630 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr1 25924336 25924878 - promoter 9 LOC_Os04g38480 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed gene BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed chr4 22682151 22687395 - promoter 9 LOC_Os04g43820 expressed protein gene expressed protein chr4 25758256 25758958 - promoter 9 LOC_Os11g28610 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr11 16045003 16047601 + promoter 9 LOC_Os02g35270 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 21187494 21190742 - promoter 9 LOC_Os05g48855 GTP binding protein, putative, expressed gene GTP binding protein, putative, expressed chr5 27942400 27944410 - promoter 9 LOC_Os12g40640 conserved hypothetical protein gene conserved hypothetical protein chr12 25116265 25120396 - promoter,downstream 9 LOC_Os05g39730 SAG20, putative, expressed gene SAG20, putative, expressed chr5 23254625 23257454 - promoter 9 LOC_Os12g05270 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr12 2345444 2346277 + promoter 9 LOC_Os04g33950 E2F family transcription factor protein, putative, expressed gene E2F family transcription factor protein, putative, expressed chr4 20377617 20383348 - promoter 9 LOC_Os10g27140 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 14230516 14233865 + promoter 9 LOC_Os05g46860 FHA domain containing protein, putative gene FHA domain containing protein, putative chr5 27063036 27064617 + promoter 9 LOC_Os09g38830 OsWAK89a - OsWAK receptor-like protein kinase gene OsWAK89a - OsWAK receptor-like protein kinase chr9 22302503 22305042 + promoter 9 LOC_Os06g09100 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 4576644 4577866 - promoter 9 LOC_Os07g05160 SKP1-like protein 1B, putative, expressed gene SKP1-like protein 1B, putative, expressed chr7 2285863 2286496 + promoter 9 LOC_Os03g56944 lysine-rich arabinogalactan protein 19 precursor, putative, expressed gene lysine-rich arabinogalactan protein 19 precursor, putative, expressed chr3 32420909 32421533 + promoter 9 LOC_Os03g52380 PIII5 - Proteinase inhibitor II family protein precursor, expressed gene PIII5 - Proteinase inhibitor II family protein precursor, expressed chr3 30069394 30070084 + promoter 9 LOC_Os02g02210 aminotransferase, putative, expressed gene aminotransferase, putative, expressed chr2 679445 697350 - promoter,downstream 9 LOC_Os03g56010 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr3 31877952 31878491 + promoter,downstream 9 LOC_Os08g17640 ZOS8-02 - C2H2 zinc finger protein gene ZOS8-02 - C2H2 zinc finger protein chr8 10780490 10781410 - promoter,downstream 9 LOC_Os09g16290 ABC-2 type transporter, putative gene ABC-2 type transporter, putative chr9 9944092 9952453 - promoter 9 LOC_Os11g08707 expressed protein gene expressed protein chr11 4639444 4640602 - promoter 9 LOC_Os06g23050 expressed protein gene expressed protein chr6 13443114 13443617 - promoter,downstream 9 LOC_Os10g05510 hypothetical protein gene hypothetical protein chr10 2719267 2719620 + promoter 9 LOC_Os06g14710 myb-like DNA-binding domain containing protein, expressed gene myb-like DNA-binding domain containing protein, expressed chr6 8282028 8282506 + promoter 9 LOC_Os02g33550 harpin-induced protein 1 domain containing protein, expressed gene harpin-induced protein 1 domain containing protein, expressed chr2 19948685 19949792 - promoter 9 LOC_Os09g11380 conserved hypothetical protein gene conserved hypothetical protein chr9 6326584 6335208 + promoter 9 LOC_Os05g48700 gibberellin 2-beta-dioxygenase, putative, expressed gene gibberellin 2-beta-dioxygenase, putative, expressed chr5 27848088 27850281 - promoter 9 LOC_Os06g19120 hypothetical protein gene hypothetical protein chr6 10875629 10876307 + promoter 9 LOC_Os03g56942 hypothetical protein gene hypothetical protein chr3 32419878 32420297 - promoter 9 LOC_Os05g47630 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed gene peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed chr5 27224393 27227233 + promoter 9 LOC_Os02g53530 ZOS2-17 - C2H2 zinc finger protein, expressed gene ZOS2-17 - C2H2 zinc finger protein, expressed chr2 32744232 32745531 - promoter 9 LOC_Os05g25560 glycosyl hydrolase family 10 protein, putative gene glycosyl hydrolase family 10 protein, putative chr5 14796987 14798837 - promoter,downstream 9 LOC_Os02g53830 MTD1, putative, expressed gene MTD1, putative, expressed chr2 32959850 32962898 + promoter 9 LOC_Os12g36010 hypothetical protein gene hypothetical protein chr12 22009539 22009883 - promoter 9 LOC_Os08g12880 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 7642557 7645307 + promoter 9 LOC_Os03g44410 hypothetical protein gene hypothetical protein chr3 24992942 24993787 + promoter 9 LOC_Os09g24570 growth regulator related protein, putative, expressed gene growth regulator related protein, putative, expressed chr9 14628655 14631858 - promoter 9 LOC_Os07g40224 hypothetical protein gene hypothetical protein chr7 24117358 24119819 + promoter 9 LOC_Os09g20320 heat shock protein DnaJ, putative gene heat shock protein DnaJ, putative chr9 12189874 12192474 + promoter,downstream 9 LOC_Os01g58080 membrane-associated salt-inducible protein, putative, expressed gene membrane-associated salt-inducible protein, putative, expressed chr1 33592700 33596295 + promoter 9 LOC_Os01g09140 hypothetical protein gene hypothetical protein chr1 4589920 4590372 + promoter,downstream 9 LOC_Os04g54600 DUF617 domain containing protein, expressed gene DUF617 domain containing protein, expressed chr4 32279825 32280966 + promoter 9 LOC_Os08g05100 hypothetical protein gene hypothetical protein chr8 2637213 2637490 - promoter,downstream 9 LOC_Os10g22600 ethylene-responsive transcription factor, putative, expressed gene ethylene-responsive transcription factor, putative, expressed chr10 11660407 11661732 + promoter 9 LOC_Os07g47970 expressed protein gene expressed protein chr7 28652866 28655022 + promoter 9 LOC_Os10g09580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 5185954 5193620 - promoter 9 LOC_Os11g44160 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 26201904 26208971 - promoter 9 LOC_Os10g29274 Leucine rich repeat N-terminal domain containing protein, putative, expressed gene Leucine rich repeat N-terminal domain containing protein, putative, expressed chr10 15158221 15163361 - promoter 9 LOC_Os07g20135 expressed protein gene expressed protein chr7 11627749 11628913 - promoter 9 LOC_Os08g31450 MBTB28 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB28 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 19448516 19449346 - promoter,downstream 9 LOC_Os04g32090 expressed protein gene expressed protein chr4 19068418 19074009 - promoter 9 LOC_Os02g16790 inactive receptor kinase At2g26730 precursor, putative gene inactive receptor kinase At2g26730 precursor, putative chr2 9571150 9571803 - promoter 9 LOC_Os01g71660 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 41526268 41528521 - promoter 9 LOC_Os09g02780 OsMADS77 - MADS-box family gene with M-alpha type-box gene OsMADS77 - MADS-box family gene with M-alpha type-box chr9 1271405 1271941 - promoter,downstream 9 LOC_Os12g37250 transposon protein, putative, Mariner sub-class, expressed gene transposon protein, putative, Mariner sub-class, expressed chr12 22815056 22817069 + promoter 9 LOC_Os02g50750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 30983439 30985164 + promoter 9 LOC_Os01g08170 expressed protein gene expressed protein chr1 3957210 3961125 + promoter,downstream 9 LOC_Os04g49800 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 29503344 29508809 + promoter 9 LOC_Os05g28770 GCRP9 - Glycine and cysteine rich family protein precursor, expressed gene GCRP9 - Glycine and cysteine rich family protein precursor, expressed chr5 16808072 16812014 + promoter 9 LOC_Os09g39850 AP2 domain containing protein gene AP2 domain containing protein chr9 22846805 22847455 + promoter 9 LOC_Os11g32060 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 18422566 18427458 - promoter 9 LOC_Os01g41300 hypothetical protein gene hypothetical protein chr1 23366420 23367379 + promoter 9 LOC_Os03g12840 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed gene Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed chr3 6900922 6906407 + promoter 9 LOC_Os05g24570 hypothetical protein gene hypothetical protein chr5 14113496 14114368 - promoter,downstream 9 LOC_Os01g09970 hypothetical protein gene hypothetical protein chr1 5189927 5190415 + promoter 9 LOC_Os06g01934 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr6 522054 529058 + promoter 9 LOC_Os10g41710 chaperonin, putative, expressed gene chaperonin, putative, expressed chr10 22381537 22385110 + promoter 9 LOC_Os09g16470 hypothetical protein gene hypothetical protein chr9 10091551 10092201 - promoter 9 LOC_Os05g45350 dnaJ domain containing protein, expressed gene dnaJ domain containing protein, expressed chr5 26248223 26251536 - promoter 9 LOC_Os02g40080 tic20, putative, expressed gene tic20, putative, expressed chr2 24262282 24264152 + promoter 9 LOC_Os05g02440 hypothetical protein gene hypothetical protein chr5 831434 831781 - promoter 9 LOC_Os04g56330 ABC transporter, ATP-binding protein, putative gene ABC transporter, ATP-binding protein, putative chr4 33395202 33397231 + promoter 9 LOC_Os02g14180 peroxidase precursor, putative gene peroxidase precursor, putative chr2 7770037 7771053 + promoter,downstream 9 LOC_Os03g25380 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr3 14511168 14513280 + promoter 9 LOC_Os06g19310 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 10977270 10981973 - promoter 9 LOC_Os05g42300 NAF1 domain containing protein, expressed gene NAF1 domain containing protein, expressed chr5 24675996 24679972 - promoter 9 LOC_Os04g50164 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 29742184 29743758 - promoter 9 LOC_Os12g40980 hypothetical protein gene hypothetical protein chr12 25330713 25331532 - promoter 9 LOC_Os11g10600 hypothetical protein gene hypothetical protein chr11 5809037 5811804 + promoter 9 LOC_Os06g30680 WD domain, G-beta repeat domain containing protein gene WD domain, G-beta repeat domain containing protein chr6 17770594 17776884 + promoter 9 LOC_Os05g11370 expressed protein gene expressed protein chr5 6419403 6422991 + promoter 9 LOC_Os01g09830 OsGrx_A2 - glutaredoxin subgroup III, expressed gene OsGrx_A2 - glutaredoxin subgroup III, expressed chr1 5084833 5085559 + promoter 9 LOC_Os11g07560 hypothetical protein gene hypothetical protein chr11 3823371 3824145 - promoter,downstream 9 LOC_Os10g20870 hypothetical protein gene hypothetical protein chr10 10503821 10504361 - promoter 9 LOC_Os12g28190 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 16637064 16643174 + promoter 9 LOC_Os05g14470 hypothetical protein gene hypothetical protein chr5 8173506 8174993 + promoter,downstream 9 LOC_Os01g34560 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr1 19058188 19060135 + promoter,downstream 9 LOC_Os12g31290 hypothetical protein gene hypothetical protein chr12 18802839 18804569 - promoter 9 LOC_Os04g44690 hypothetical protein gene hypothetical protein chr4 26282409 26282935 - promoter 9 LOC_Os10g05110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 2496326 2496598 - promoter 9 LOC_Os08g35100 hypothetical protein gene hypothetical protein chr8 22123853 22124339 - promoter 9 LOC_Os04g04140 hypothetical protein gene hypothetical protein chr4 1911354 1912432 - promoter 9 LOC_Os03g46930 hypothetical protein gene hypothetical protein chr3 26534993 26535468 - promoter 9 LOC_Os11g39780 expressed protein gene expressed protein chr11 23241549 23242127 - promoter,downstream 9 LOC_Os10g39370 hypothetical protein gene hypothetical protein chr10 20934528 20935111 + promoter 9 LOC_Os10g23290 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 12083352 12093030 - promoter,downstream 9 LOC_Os04g51840 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 30558441 30561530 + promoter 9 LOC_Os08g30280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 18625590 18629117 - promoter 9 LOC_Os03g02970 Dicer, putative, expressed gene Dicer, putative, expressed chr3 1194073 1203837 - promoter 9 LOC_Os04g46770 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 27545449 27545917 + promoter 9 LOC_Os09g16995 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr9 10387115 10390399 - promoter,downstream 9 LOC_Os04g33560 expressed protein gene expressed protein chr4 20132608 20134226 + promoter 9 LOC_Os02g46200 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 28141085 28145322 - promoter 9 LOC_Os12g40619 hypothetical protein gene hypothetical protein chr12 25105856 25106098 + promoter 9 LOC_Os03g45800 OsSAUR14 - Auxin-responsive SAUR gene family member gene OsSAUR14 - Auxin-responsive SAUR gene family member chr3 25864226 25864582 - promoter,downstream 9 LOC_Os04g56840 expressed protein gene expressed protein chr4 33700415 33701941 - promoter 9 LOC_Os04g53240 autophagy-related protein, putative, expressed gene autophagy-related protein, putative, expressed chr4 31531261 31534066 - promoter 9 LOC_Os04g54580 expressed protein gene expressed protein chr4 32271948 32272560 + promoter 9 LOC_Os06g45980 toprim domain-containing protein, putative, expressed gene toprim domain-containing protein, putative, expressed chr6 27865743 27873408 + promoter 9 LOC_Os01g13390 expressed protein gene expressed protein chr1 7456835 7458959 + promoter 9 LOC_Os04g52890 ATBAG1, putative, expressed gene ATBAG1, putative, expressed chr4 31312153 31317668 + promoter 9 LOC_Os01g14180 expressed protein gene expressed protein chr1 7944214 7945972 - promoter 9 LOC_Os09g34260 hypothetical protein gene hypothetical protein chr9 20223751 20224881 - promoter 9 LOC_Os07g11370 hypothetical protein gene hypothetical protein chr7 6255551 6255970 + promoter,downstream 9 LOC_Os11g07440 plant neutral invertase domain containing protein, expressed gene plant neutral invertase domain containing protein, expressed chr11 3735532 3739523 - promoter 9 LOC_Os10g06500 hypothetical protein gene hypothetical protein chr10 3339530 3339976 - promoter 9 LOC_Os08g02180 expressed protein gene expressed protein chr8 733623 734665 - promoter 9 LOC_Os07g11770 expressed protein gene expressed protein chr7 6501645 6506131 + promoter 9 LOC_Os07g18760 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 11092794 11095274 + promoter 9 LOC_Os03g23050 expressed protein gene expressed protein chr3 13318646 13325546 + promoter 9 LOC_Os02g40540 hypothetical protein gene hypothetical protein chr2 24586467 24587608 - promoter 9 LOC_Os08g43120 Plant PDR ABC transporter associated domain containing protein, expressed gene Plant PDR ABC transporter associated domain containing protein, expressed chr8 27265369 27274826 + promoter 9 LOC_Os12g10230 hypothetical protein gene hypothetical protein chr12 5400799 5401182 - promoter 9 LOC_Os12g28720 expressed protein gene expressed protein chr12 16960559 16964907 - promoter 9 LOC_Os03g44040 hypothetical protein gene hypothetical protein chr3 24752243 24752852 - promoter,downstream 9 LOC_Os10g01260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 168495 170573 - promoter 9 LOC_Os03g49780 hypothetical protein gene hypothetical protein chr3 28336652 28337392 + promoter 9 LOC_Os10g41610 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 22331798 22335394 - promoter 9 LOC_Os03g10750 CUE domain containing protein, expressed gene CUE domain containing protein, expressed chr3 5482359 5488241 - promoter 9 LOC_Os05g39880 hypothetical protein gene hypothetical protein chr5 23372238 23373578 - promoter,downstream 9 LOC_Os12g12960 hypothetical protein gene hypothetical protein chr12 7174466 7175771 + promoter,downstream 9 LOC_Os01g40190 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 22674890 22677576 + promoter 9 LOC_Os06g14960 hypothetical protein gene hypothetical protein chr6 8488825 8489043 - promoter 9 LOC_Os02g14500 expressed protein gene expressed protein chr2 7991880 7996777 - promoter 9 LOC_Os07g06700 hypothetical protein gene hypothetical protein chr7 3264354 3265476 - promoter 9 LOC_Os01g14000 hypothetical protein gene hypothetical protein chr1 7843348 7843658 + promoter,downstream 9 LOC_Os07g30650 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 18135765 18139131 + promoter 9 LOC_Os05g49850 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 28543283 28547545 + promoter 9 LOC_Os11g04040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 1633652 1635917 + promoter 9 LOC_Os11g30630 unknown gene unknown chr11 17367216 17367581 + promoter 9 LOC_Os08g40530 calcium-transporting ATPase 9, plasma membrane-type, putative, expressed gene calcium-transporting ATPase 9, plasma membrane-type, putative, expressed chr8 25649304 25657011 - promoter 9 LOC_Os06g03059 hypothetical protein gene hypothetical protein chr6 1128062 1128742 - promoter 9 LOC_Os08g43420 hypothetical protein gene hypothetical protein chr8 27457928 27458257 - promoter,downstream 9 LOC_Os02g09260 cytochrome P450 71A1, putative, expressed gene cytochrome P450 71A1, putative, expressed chr2 4768843 4771122 + promoter 9 LOC_Os03g52300 SCP-like extracellular protein gene SCP-like extracellular protein chr3 30027143 30029906 - promoter 9 LOC_Os04g46690 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 27494890 27502472 + promoter 9 LOC_Os01g07450 MYB family transcription factor, putative gene MYB family transcription factor, putative chr1 3531859 3532749 + promoter,downstream 9 LOC_Os11g41400 conserved hypothetical protein gene conserved hypothetical protein chr11 24377878 24378619 - promoter 9 LOC_Os03g41160 RNA-directed DNA polymerase, putative gene RNA-directed DNA polymerase, putative chr3 22883289 22884121 + promoter 9 LOC_Os01g19290 integral membrane protein DUF6 containing protein, expressed gene integral membrane protein DUF6 containing protein, expressed chr1 10910272 10913771 + promoter 9 LOC_Os11g36360 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 20954552 20959707 + promoter 9 LOC_Os10g08440 hypothetical protein gene hypothetical protein chr10 4600586 4601038 - promoter 9 LOC_Os04g50930 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr4 29960062 29963226 + promoter 9 LOC_Os01g03350 conserved hypothetical protein gene conserved hypothetical protein chr1 1349820 1350107 + promoter 9 LOC_Os03g43100 expressed protein gene expressed protein chr3 24044262 24045416 + promoter 9 LOC_Os04g10150 expressed protein gene expressed protein chr4 5478882 5479699 - promoter,downstream 9 LOC_Os05g06160 trehalose phosphatase, putative gene trehalose phosphatase, putative chr5 3091597 3095006 + promoter 9 LOC_Os03g57960 cupin domain containing protein, expressed gene cupin domain containing protein, expressed chr3 33012905 33015819 + promoter 9 LOC_Os01g11840 xylem cysteine proteinase 2 precursor, putative, expressed gene xylem cysteine proteinase 2 precursor, putative, expressed chr1 6399890 6401066 + promoter 9 LOC_Os10g32210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 16847997 16848710 + promoter 9 LOC_Os04g51180 GPR89A, putative, expressed gene GPR89A, putative, expressed chr4 30126393 30131177 - promoter 9 LOC_Os03g06790 hypothetical protein gene hypothetical protein chr3 3448499 3448720 - promoter,downstream 9 LOC_Os08g29340 ligA, putative gene ligA, putative chr8 17992986 17994906 - promoter 9 LOC_Os10g25960 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 13380913 13384599 - promoter 9 LOC_Os09g39754 expressed protein gene expressed protein chr9 22802569 22803072 - promoter,downstream 9 LOC_Os04g23060 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 13086943 13091743 + promoter 9 LOC_Os04g21170 hypothetical protein gene hypothetical protein chr4 11909505 11909794 - promoter 9 LOC_Os07g11959 unknown gene unknown chr7 6624095 6624607 + promoter,downstream 9 LOC_Os10g37940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 20248559 20254170 + promoter 9 LOC_Os11g02340 hypothetical protein gene hypothetical protein chr11 681453 683177 - promoter,downstream 9 LOC_Os04g43080 hypothetical protein gene hypothetical protein chr4 25326989 25327426 - promoter 9 LOC_Os02g33980 hypothetical protein gene hypothetical protein chr2 20252258 20252653 + promoter 9 LOC_Os08g44760 domain of unknown function DUF966 domain containing protein, expressed gene domain of unknown function DUF966 domain containing protein, expressed chr8 28120580 28123922 - promoter 9 LOC_Os11g38640 expressed protein gene expressed protein chr11 22444557 22451008 + promoter 9 LOC_Os10g02284 OsWAK97 - OsWAK receptor-like protein kinase, expressed gene OsWAK97 - OsWAK receptor-like protein kinase, expressed chr10 817676 820860 + promoter 9 LOC_Os05g39700 hypothetical protein gene hypothetical protein chr5 23241028 23242290 + promoter,downstream 9 LOC_Os03g06835 expressed protein gene expressed protein chr3 3462645 3466636 + promoter 9 LOC_Os02g43570 hypothetical protein gene hypothetical protein chr2 26284282 26284741 + promoter,downstream 9 LOC_Os11g47990 hypothetical protein gene hypothetical protein chr11 28417471 28417734 - promoter 9 LOC_Os07g32550 dimethyladenosine transferase, putative, expressed gene dimethyladenosine transferase, putative, expressed chr7 19402529 19404141 + promoter 9 LOC_Os03g47670 ankyrin repeat family protein, putative gene ankyrin repeat family protein, putative chr3 26993788 26999018 + promoter 9 LOC_Os10g39330 Eukaryotic aspartyl protease domain containing protein gene Eukaryotic aspartyl protease domain containing protein chr10 20919401 20920657 + promoter 9 LOC_Os11g33220 OsFBX423 - F-box domain containing protein gene OsFBX423 - F-box domain containing protein chr11 19178175 19179929 + promoter 9 LOC_Os01g67670 gibberellin response modulator protein, putative gene gibberellin response modulator protein, putative chr1 39323315 39324407 - promoter 9 LOC_Os10g32900 CCT motif family protein, expressed gene CCT motif family protein, expressed chr10 17150452 17153387 + promoter 9 LOC_Os09g29650 hypothetical protein gene hypothetical protein chr9 18022855 18026263 + promoter 9 LOC_Os11g08770 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 4659597 4662635 - promoter 9 LOC_Os06g43610 formamidopyrimidine-DNA glycosylase, putative, expressed gene formamidopyrimidine-DNA glycosylase, putative, expressed chr6 26228860 26231888 - promoter 9 LOC_Os12g38840 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 23830041 23832899 - promoter 9 LOC_Os08g12420 hypothetical protein gene hypothetical protein chr8 7329540 7330797 + promoter,downstream 9 LOC_Os09g38370 signal peptidase complex subunit 3, putative, expressed gene signal peptidase complex subunit 3, putative, expressed chr9 22091683 22094820 - promoter,downstream 9 LOC_Os12g01820 ATCHX, putative, expressed gene ATCHX, putative, expressed chr12 489788 492834 + promoter 9 LOC_Os12g31540 expressed protein gene expressed protein chr12 18938867 18941966 + promoter 9 LOC_Os08g17194 unknown gene unknown chr8 10533898 10538932 + promoter 9 LOC_Os02g53010 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 32435603 32436459 + promoter 9 LOC_Os11g11270 hypothetical protein gene hypothetical protein chr11 6233515 6234019 - promoter 9 LOC_Os03g09970 sulfate transporter, putative, expressed gene sulfate transporter, putative, expressed chr3 4983579 4991413 + promoter 9 LOC_Os02g19440 sirohydrochlorin ferrochelatase, putative, expressed gene sirohydrochlorin ferrochelatase, putative, expressed chr2 11353277 11357736 - promoter 9 LOC_Os02g45170 helix-loop-helix DNA-binding protein, putative, expressed gene helix-loop-helix DNA-binding protein, putative, expressed chr2 27410657 27416092 + promoter 9 LOC_Os06g36260 hypothetical protein gene hypothetical protein chr6 21229221 21229681 - promoter 9 LOC_Os04g44890 tRNA-dihydrouridine synthase, putative, expressed gene tRNA-dihydrouridine synthase, putative, expressed chr4 26380394 26386558 + promoter 9 LOC_Os03g52280 expressed protein gene expressed protein chr3 30015853 30017742 - promoter 9 LOC_Os01g71870 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 41631242 41632042 - promoter 9 LOC_Os03g15340 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr3 8395507 8396383 + promoter 9 LOC_Os07g48270 helicase conserved C-terminal domain containing protein, expressed gene helicase conserved C-terminal domain containing protein, expressed chr7 28831622 28833733 - promoter 9 LOC_Os11g43049 exo70 exocyst complex subunit, putative gene exo70 exocyst complex subunit, putative chr11 25487212 25488951 + promoter 9 LOC_Os06g09790 ethylene-responsive transcription factor, putative, expressed gene ethylene-responsive transcription factor, putative, expressed chr6 4990220 4991150 + promoter 9 LOC_Os07g44930 dirigent, putative, expressed gene dirigent, putative, expressed chr7 26804270 26805142 + promoter 9 LOC_Os12g35030 plus-3 domain containing protein, expressed gene plus-3 domain containing protein, expressed chr12 21288793 21290987 + promoter 9 LOC_Os05g48620 tRNA-binding arm, putative, expressed gene tRNA-binding arm, putative, expressed chr5 27805829 27814895 - promoter 9 LOC_Os07g01690 hypothetical protein gene hypothetical protein chr7 413900 414254 + promoter 9 LOC_Os08g14370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 8622650 8623363 + promoter 9 LOC_Os12g01210 HCF152, putative, expressed gene HCF152, putative, expressed chr12 124923 127386 + promoter 9 LOC_Os08g23820 hypothetical protein gene hypothetical protein chr8 14422620 14423066 + promoter 9 LOC_Os03g57630 hypothetical protein gene hypothetical protein chr3 32842165 32842846 - promoter 9 LOC_Os04g44520 hypothetical protein gene hypothetical protein chr4 26166061 26167116 + promoter 9 LOC_Os01g07430 myb-like DNA-binding domain containing protein, putative gene myb-like DNA-binding domain containing protein, putative chr1 3519778 3520976 - promoter,downstream 9 LOC_Os07g48570 expressed protein gene expressed protein chr7 29076204 29080187 - promoter 9 LOC_Os06g33110 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 19273319 19275261 + promoter 9 LOC_Os02g53350 expressed protein gene expressed protein chr2 32657538 32658339 - promoter 9 LOC_Os07g32700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 19528479 19529369 + promoter,downstream 9 LOC_Os05g43895 expressed protein gene expressed protein chr5 25468252 25468491 + promoter 9 LOC_Os02g27380 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 16130523 16138359 + promoter,downstream 9 LOC_Os03g13220 expressed protein gene expressed protein chr3 7131563 7135036 + promoter 9 LOC_Os12g40600 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 25095558 25098312 - promoter 9 LOC_Os08g05950 hypothetical protein gene hypothetical protein chr8 3238631 3239186 - promoter,downstream 9 LOC_Os05g33160 inactive receptor kinase At1g27190 precursor, putative, expressed gene inactive receptor kinase At1g27190 precursor, putative, expressed chr5 19386215 19387325 - promoter 9 LOC_Os11g12420 serpin domain containing protein, putative, expressed gene serpin domain containing protein, putative, expressed chr11 6935908 6937852 + promoter 9 LOC_Os06g47410 hypothetical protein gene hypothetical protein chr6 28724243 28725531 - promoter 9 LOC_Os08g42580 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr8 26906120 26910915 + promoter 9 LOC_Os01g14240 hypothetical protein gene hypothetical protein chr1 7983627 7983946 - promoter,downstream 9 LOC_Os02g40600 hypothetical protein gene hypothetical protein chr2 24621341 24622075 - promoter,downstream 9 LOC_Os01g47080 pyruvate kinase, putative, expressed gene pyruvate kinase, putative, expressed chr1 26887349 26894688 - promoter 9 LOC_Os02g52890 hypothetical protein gene hypothetical protein chr2 32329755 32330054 - promoter 9 LOC_Os04g30640 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 18126523 18126813 - promoter 9 LOC_Os03g21880 THION28 - Plant thionin family protein precursor, expressed gene THION28 - Plant thionin family protein precursor, expressed chr3 12513708 12514282 + promoter 9 LOC_Os04g56130 protein kinase domain containing protein gene protein kinase domain containing protein chr4 33241743 33243102 + promoter 9 LOC_Os08g03820 hypothetical protein gene hypothetical protein chr8 1824540 1826835 - promoter 9 LOC_Os01g68010 TBC domain containing protein, expressed gene TBC domain containing protein, expressed chr1 39537100 39540053 - promoter 9 LOC_Os08g39950 potassium transporter, putative, expressed gene potassium transporter, putative, expressed chr8 25310822 25315856 + promoter 9 LOC_Os12g06080 hypothetical protein gene hypothetical protein chr12 2835023 2835997 - promoter,downstream 9 LOC_Os01g37870 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr1 21194353 21201916 + promoter 9 LOC_Os12g40960 conserved hypothetical protein gene conserved hypothetical protein chr12 25326352 25326768 + promoter,downstream 9 LOC_Os11g42660 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr11 25229088 25233862 + promoter 9 LOC_Os12g40760 expressed protein gene expressed protein chr12 25201267 25202229 + promoter 9 LOC_Os05g49290 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr5 28215441 28218633 - promoter 9 LOC_Os02g10130 tubulin binding cofactor C, putative, expressed gene tubulin binding cofactor C, putative, expressed chr2 5297643 5306435 - promoter 9 LOC_Os10g39660 expressed protein gene expressed protein chr10 21118152 21119759 + promoter 9 LOC_Os05g48710 conserved hypothetical protein gene conserved hypothetical protein chr5 27858076 27861101 + promoter 9 LOC_Os09g03290 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 1578920 1581614 + promoter 9 LOC_Os11g42480 transferase family domain containing protein, expressed gene transferase family domain containing protein, expressed chr11 25117803 25119209 - promoter 9 LOC_Os08g33760 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 21113651 21118002 + promoter 9 LOC_Os11g07880 expressed protein gene expressed protein chr11 4039419 4041836 - promoter 9 LOC_Os02g30390 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 18093017 18096582 - promoter 9 LOC_Os10g38100 thaumatin-like protein precursor, putative gene thaumatin-like protein precursor, putative chr10 20335890 20336480 - promoter 9 LOC_Os07g01160 hypothetical protein gene hypothetical protein chr7 99952 100704 - promoter,downstream 9 LOC_Os04g38290 expressed protein gene expressed protein chr4 22599620 22606210 - promoter 9 LOC_Os04g34640 conserved hypothetical protein gene conserved hypothetical protein chr4 20785240 20786405 - promoter 9 LOC_Os11g12610 hypothetical protein gene hypothetical protein chr11 7080062 7080534 - promoter,downstream 9 LOC_Os05g30360 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 17544082 17545090 - promoter 9 LOC_Os04g38220 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr4 22559067 22562972 + promoter 9 LOC_Os03g47010 glycosyl hydrolase family 10 protein, putative, expressed gene glycosyl hydrolase family 10 protein, putative, expressed chr3 26569550 26572336 + promoter 9 LOC_Os02g17220 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 9871117 9871782 - promoter 9 LOC_Os02g01320 hypothetical protein gene hypothetical protein chr2 171034 171569 + promoter,downstream 9 LOC_Os01g09950 hypothetical protein gene hypothetical protein chr1 5172555 5173272 - promoter 9 LOC_Os08g37300 expressed protein gene expressed protein chr8 23572851 23573596 + promoter 9 LOC_Os01g61470 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr1 35546858 35547427 - promoter,downstream 9 LOC_Os07g48840 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr7 29224284 29227512 + promoter 9 LOC_Os12g30990 OsFBX447 - F-box domain containing protein gene OsFBX447 - F-box domain containing protein chr12 18585419 18586357 - promoter 9 LOC_Os03g42500 hypothetical protein gene hypothetical protein chr3 23642472 23643442 - promoter 9 LOC_Os03g21964 expressed protein gene expressed protein chr3 12566655 12569762 + promoter,downstream 9 LOC_Os07g34540 hypothetical protein gene hypothetical protein chr7 20706362 20707821 - promoter 9 LOC_Os12g05700 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr12 2628448 2631699 + promoter,downstream 9 LOC_Os05g19010 expressed protein gene expressed protein chr5 11029051 11029987 + promoter 9 LOC_Os11g32970 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 19019037 19021799 + promoter 9 LOC_Os02g54200 mitochondrial transcription termination factor family protein, putative, expressed gene mitochondrial transcription termination factor family protein, putative, expressed chr2 33218155 33221808 - promoter 9 LOC_Os09g08950 hypothetical protein gene hypothetical protein chr9 4757429 4757926 + promoter 9 LOC_Os03g01830 DEAD-box ATP-dependent RNA helicase, putative, expressed gene DEAD-box ATP-dependent RNA helicase, putative, expressed chr3 504920 508292 + promoter 9 LOC_Os03g02050 LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 650991 651801 - promoter 9 LOC_Os08g34340 DUF593 domain containing protein, expressed gene DUF593 domain containing protein, expressed chr8 21549197 21555876 + promoter 9 LOC_Os08g12610 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr8 7452149 7454320 + promoter 9 LOC_Os01g72520 phosphoesterase family protein, putative, expressed gene phosphoesterase family protein, putative, expressed chr1 42062138 42066745 - promoter 9 LOC_Os05g45540 hypothetical protein gene hypothetical protein chr5 26334683 26335258 - promoter 9 LOC_Os03g10260 expressed protein gene expressed protein chr3 5224043 5225496 - promoter 9 LOC_Os02g54580 serine esterase family protein, putative, expressed gene serine esterase family protein, putative, expressed chr2 33424080 33427884 + promoter,downstream 9 LOC_Os05g28820 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr5 16829461 16835688 + promoter 9 LOC_Os10g04270 jacalin-like lectin domain containing protein, expressed gene jacalin-like lectin domain containing protein, expressed chr10 1997789 1998818 - promoter 9 LOC_Os07g15380 unknown gene unknown chr7 8882178 8882636 + promoter,downstream 9 LOC_Os03g30084 conserved hypothetical protein gene conserved hypothetical protein chr3 17158313 17159014 + promoter 9 LOC_Os02g17030 hypothetical protein gene hypothetical protein chr2 9734399 9734656 - promoter 9 LOC_Os04g45130 heavy-metal-associated domain-containing protein, putative, expressed gene heavy-metal-associated domain-containing protein, putative, expressed chr4 26499456 26500519 - promoter 9 LOC_Os11g18940 WW domain containing protein, expressed gene WW domain containing protein, expressed chr11 10771040 10772747 + promoter 9 LOC_Os12g38590 pumilio-family RNA binding repeat containing protein, expressed gene pumilio-family RNA binding repeat containing protein, expressed chr12 23669895 23679360 + promoter 9 LOC_Os03g46325 pattern formation protein, putative, expressed gene pattern formation protein, putative, expressed chr3 26198957 26199947 + promoter 9 LOC_Os11g10930 hypothetical protein gene hypothetical protein chr11 6031407 6032520 - promoter 9 LOC_Os05g42420 hypothetical protein gene hypothetical protein chr5 24796969 24797605 + promoter,downstream 9 LOC_Os07g41940 conserved hypothetical protein gene conserved hypothetical protein chr7 25118822 25119037 - promoter,downstream 9 LOC_Os01g18530 hypothetical protein gene hypothetical protein chr1 10430449 10431699 - promoter,downstream 9 LOC_Os08g38870 hypothetical protein gene hypothetical protein chr8 24565771 24566034 + promoter 9 LOC_Os10g34110 hypothetical protein gene hypothetical protein chr10 18131807 18134870 - promoter 9 LOC_Os07g13990 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr7 7990322 7993824 - promoter,downstream 9 LOC_Os08g31880 conserved hypothetical protein gene conserved hypothetical protein chr8 19760285 19761514 - promoter,downstream 9 LOC_Os12g24519 hypothetical protein gene hypothetical protein chr12 13995152 13996126 - promoter 9 LOC_Os09g11770 hypothetical protein gene hypothetical protein chr9 6579470 6579769 + promoter 9 LOC_Os05g10390 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 5661735 5665016 + promoter 9 LOC_Os06g12360 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr6 6695667 6699783 + promoter 9 LOC_Os04g40680 expressed protein gene expressed protein chr4 23960794 23962872 + promoter 9 LOC_Os07g15190 3-ketoacyl-CoA synthase 2, putative gene 3-ketoacyl-CoA synthase 2, putative chr7 8756343 8756898 + promoter 9 LOC_Os01g74440 OsMADS79 - MADS-box family gene with M-alpha type-box gene OsMADS79 - MADS-box family gene with M-alpha type-box chr1 43111737 43112363 + promoter,downstream 9 LOC_Os12g10960 hypothetical protein gene hypothetical protein chr12 5916307 5916696 - promoter 9 LOC_Os01g55860 expressed protein gene expressed protein chr1 32166837 32170299 + promoter 9 LOC_Os02g13290 phosphoethanolamine/phosphocholine phosphatase, putative, expressed gene phosphoethanolamine/phosphocholine phosphatase, putative, expressed chr2 7078703 7080035 + promoter 9 LOC_Os06g29780 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 17106336 17107478 + promoter 9 LOC_Os05g02640 hydrolase, NUDIX family, domain containing protein, expressed gene hydrolase, NUDIX family, domain containing protein, expressed chr5 922020 926073 + promoter 9 LOC_Os04g59270 hypothetical protein gene hypothetical protein chr4 35062068 35063306 - promoter 9 LOC_Os11g41610 40S ribosomal protein S29, putative gene 40S ribosomal protein S29, putative chr11 24507599 24508890 + promoter 9 LOC_Os11g40850 expressed protein gene expressed protein chr11 23973366 23974269 + promoter,downstream 9 LOC_Os01g55070 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr1 31660680 31663249 - promoter 9 LOC_Os09g19400 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr9 11610265 11615749 - promoter 9 LOC_Os06g02930 expressed protein gene expressed protein chr6 1077048 1078054 - promoter,downstream 9 LOC_Os03g06050 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 3025457 3026517 + promoter 9 LOC_Os04g57620 hypothetical protein gene hypothetical protein chr4 34107504 34111155 - promoter 9 LOC_Os12g32090 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 19328425 19331315 + promoter 9 LOC_Os06g45480 hydrolase, putative, expressed gene hydrolase, putative, expressed chr6 27494297 27498535 - promoter 9 LOC_Os11g36180 receptor kinase, putative gene receptor kinase, putative chr11 20807411 20811321 - promoter 9 LOC_Os06g36220 OsFBX198 - F-box domain containing protein, expressed gene OsFBX198 - F-box domain containing protein, expressed chr6 21212902 21217158 - promoter 9 LOC_Os01g59730 ribosomal protein L7Ae, putative, expressed gene ribosomal protein L7Ae, putative, expressed chr1 34549310 34551595 - promoter 9 LOC_Os10g26410 bHLH family protein, putative, expressed gene bHLH family protein, putative, expressed chr10 13651121 13651501 - promoter 9 LOC_Os01g62514 WRKY DNA-binding domain containing protein, expressed gene WRKY DNA-binding domain containing protein, expressed chr1 36192797 36193568 - promoter,downstream 9 LOC_Os08g03510 MBTB18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr8 1641224 1642357 + promoter 9 LOC_Os05g41850 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 24443516 24449059 + promoter 9 LOC_Os02g40010 phosphoribosyl transferase, putative, expressed gene phosphoribosyl transferase, putative, expressed chr2 24217436 24222897 + promoter 9 LOC_Os03g44930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 25363611 25365436 + promoter 9 LOC_Os06g03970 receptor-like protein kinase 5 precursor, putative, expressed gene receptor-like protein kinase 5 precursor, putative, expressed chr6 1604461 1611410 + promoter 9 LOC_Os04g44070 hypothetical protein gene hypothetical protein chr4 25918738 25919269 + promoter 9 LOC_Os12g25665 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr12 14865490 14867728 - promoter 9 LOC_Os03g39160 frigida, putative, expressed gene frigida, putative, expressed chr3 21747106 21750198 + promoter 9 LOC_Os06g06900 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr6 3272374 3275891 + promoter 9 LOC_Os01g65540 hypothetical protein gene hypothetical protein chr1 38039857 38041576 - promoter 9 LOC_Os07g09340 plasma membrane ATPase, putative, expressed gene plasma membrane ATPase, putative, expressed chr7 4913609 4919789 + promoter 9 LOC_Os02g08400 HLS, putative, expressed gene HLS, putative, expressed chr2 4481869 4483467 + promoter 9 LOC_Os07g18620 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 11000555 11004241 - promoter,downstream 9 LOC_Os05g43830 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr5 25414128 25421792 - promoter 9 LOC_Os07g48190 conserved hypothetical protein gene conserved hypothetical protein chr7 28783743 28784240 + promoter 9 LOC_Os11g43350 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 25690877 25696622 + promoter,downstream 9 LOC_Os02g03970 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr2 1708915 1716927 - promoter,downstream 9 LOC_Os02g53950 hypothetical protein gene hypothetical protein chr2 33028536 33029978 + promoter,downstream 9 LOC_Os03g29010 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 16464981 16468020 - promoter 9 LOC_Os11g33280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 19212650 19217474 + promoter 9 LOC_Os08g42510 hypothetical protein gene hypothetical protein chr8 26863205 26863681 + promoter,downstream 9 LOC_Os12g02750 expressed protein gene expressed protein chr12 970331 974926 + promoter 9 LOC_Os03g46190 parafibromin, putative, expressed gene parafibromin, putative, expressed chr3 26113867 26117722 - promoter 9 LOC_Os01g15934 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 8972604 8977182 - promoter 9 LOC_Os01g38530 ELF3 protein, putative, expressed gene ELF3 protein, putative, expressed chr1 21635986 21642066 - promoter 9 LOC_Os03g47702 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 27023585 27036021 + promoter 9 LOC_Os01g54230 conserved hypothetical protein gene conserved hypothetical protein chr1 31197085 31197877 + promoter 9 LOC_Os08g09900 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr8 5712948 5718163 - promoter 9 LOC_Os04g43590 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 25608017 25613290 - promoter 9 LOC_Os07g03620 SCP-like extracellular protein gene SCP-like extracellular protein chr7 1450956 1451432 + promoter,downstream 9 LOC_Os02g44132 expressed protein gene expressed protein chr2 26692684 26695432 + promoter 9 LOC_Os01g68279 unknown gene unknown chr1 39677413 39678117 - promoter,downstream 9 LOC_Os08g11459 unknown gene unknown chr8 6724600 6724771 + promoter,downstream 9 LOC_Os03g13410 hypothetical protein gene hypothetical protein chr3 7252317 7252719 - promoter 9 LOC_Os02g55130 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed gene OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed chr2 33763429 33770655 + promoter 9 LOC_Os05g46820 hypothetical protein gene hypothetical protein chr5 27054682 27055677 - promoter,downstream 9 LOC_Os04g28860 conserved hypothetical protein gene conserved hypothetical protein chr4 16929010 16934869 + promoter 9 LOC_Os04g03370 cysteine-rich receptor-like protein kinase 41 precursor, putative gene cysteine-rich receptor-like protein kinase 41 precursor, putative chr4 1442288 1444218 - promoter 9 LOC_Os11g09260 expressed protein gene expressed protein chr11 4961045 4962931 - promoter 9 LOC_Os09g19670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 11766727 11770432 + promoter 9 LOC_Os09g11184 unknown gene unknown chr9 6199149 6199909 - promoter,downstream 9 LOC_Os12g43820 GCRP5 - Glycine and cysteine rich family protein precursor, expressed gene GCRP5 - Glycine and cysteine rich family protein precursor, expressed chr12 27175657 27176105 + promoter,downstream 9 LOC_Os08g15430 conserved hypothetical protein gene conserved hypothetical protein chr8 9388256 9388745 - promoter 9 LOC_Os03g04580 expressed protein gene expressed protein chr3 2138906 2140368 + promoter 9 LOC_Os03g20100 S1 RNA binding domain containing protein, expressed gene S1 RNA binding domain containing protein, expressed chr3 11350149 11354491 - promoter 9 LOC_Os11g45540 TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-lh.11 - DUF26 kinases have homology to DUF26 containing loci, expressed chr11 27099470 27102500 - promoter 9 LOC_Os01g74210 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 42986332 42990029 - promoter 9 LOC_Os07g41660 expressed protein gene expressed protein chr7 24964971 24967305 - promoter 9 LOC_Os02g19430 conserved hypothetical protein gene conserved hypothetical protein chr2 11352154 11352673 + promoter 9 LOC_Os03g16920 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr3 9410430 9415018 - promoter 9 LOC_Os10g33390 hypothetical protein gene hypothetical protein chr10 17500936 17502534 - promoter 9 LOC_Os05g10320 hypothetical protein gene hypothetical protein chr5 5635802 5636074 + promoter 9 LOC_Os08g31630 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed gene uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed chr8 19576057 19580659 + promoter 9 LOC_Os07g46220 SNARE associated Golgi protein, putative, expressed gene SNARE associated Golgi protein, putative, expressed chr7 27578356 27583291 + promoter 9 LOC_Os07g14770 hypothetical protein gene hypothetical protein chr7 8436121 8436324 + promoter 9 LOC_Os02g46956 expressed protein gene expressed protein chr2 28663175 28666523 + promoter 9 LOC_Os01g62970 expressed protein gene expressed protein chr1 36478536 36483008 + promoter 9 LOC_Os12g18530 nucleotidyltransferase, putative, expressed gene nucleotidyltransferase, putative, expressed chr12 10709294 10715231 - promoter 9 LOC_Os05g38350 glycerol-3-phosphate acyltransferase 8, putative, expressed gene glycerol-3-phosphate acyltransferase 8, putative, expressed chr5 22418745 22421987 + promoter 9 LOC_Os09g28910 carbonic anhydrase, chloroplast precursor, putative, expressed gene carbonic anhydrase, chloroplast precursor, putative, expressed chr9 17566631 17571391 - promoter 9 LOC_Os03g49700 SNARE associated Golgi protein, putative, expressed gene SNARE associated Golgi protein, putative, expressed chr3 28290196 28293344 + promoter 9 LOC_Os08g44200 ECT5, putative, expressed gene ECT5, putative, expressed chr8 27822318 27827602 - promoter 9 LOC_Os04g35940 OsFBX135 - F-box domain containing protein, expressed gene OsFBX135 - F-box domain containing protein, expressed chr4 21740205 21742464 - promoter 9 LOC_Os11g17600 roothairless 1, putative, expressed gene roothairless 1, putative, expressed chr11 9789485 9804846 + promoter 9 LOC_Os12g34980 csAtPR5, putative, expressed gene csAtPR5, putative, expressed chr12 21255727 21259333 + promoter 9 LOC_Os04g48520 ZOS4-12 - C2H2 zinc finger protein, expressed gene ZOS4-12 - C2H2 zinc finger protein, expressed chr4 28739791 28744124 + promoter 9 LOC_Os05g32930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 19229501 19231943 - promoter 9 LOC_Os06g06760 protein kinase, putative, expressed gene protein kinase, putative, expressed chr6 3174776 3180763 - promoter 9 LOC_Os10g29440 speckle-type POZ protein, putative, expressed gene speckle-type POZ protein, putative, expressed chr10 15222821 15223972 + promoter 9 LOC_Os05g12460 expressed protein gene expressed protein chr5 7158146 7159659 - promoter 9 LOC_Os06g16820 hypothetical protein gene hypothetical protein chr6 9742064 9742879 + promoter 9 LOC_Os12g40950 hypothetical protein gene hypothetical protein chr12 25324887 25325406 + promoter 9 LOC_Os02g37200 hydrophobin, putative gene hydrophobin, putative chr2 22475779 22476548 - promoter 9 LOC_Os01g25402 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 14364154 14373303 + promoter 9 LOC_Os08g37940 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed gene HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed chr8 24020787 24024459 - promoter 9 LOC_Os04g18650 AP2 domain containing protein gene AP2 domain containing protein chr4 10307715 10308101 - promoter,downstream 9 LOC_Os05g08840 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr5 4877600 4883578 + promoter 9 LOC_Os06g50050 AAA-type ATPase family protein, putative gene AAA-type ATPase family protein, putative chr6 30331388 30335427 + promoter 9 LOC_Os11g30590 transposon protein, putative, Ac/Ds sub-class gene transposon protein, putative, Ac/Ds sub-class chr11 17341763 17345555 + promoter 9 LOC_Os10g06680 expressed protein gene expressed protein chr10 3461805 3463244 + promoter 9 LOC_Os07g01230 expressed protein gene expressed protein chr7 127668 130371 - promoter 9 LOC_Os10g31640 glycine-rich cell wall structural protein 2 precursor, putative, expressed gene glycine-rich cell wall structural protein 2 precursor, putative, expressed chr10 16510269 16511138 - promoter 9 LOC_Os06g34980 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr6 20345077 20347635 + promoter 9 LOC_Os10g32930 hypothetical protein gene hypothetical protein chr10 17165510 17165779 + promoter 9 LOC_Os10g21070 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 10595737 10604788 + promoter 9 LOC_Os07g40974 NAD dependent epimerase/dehydratase family protein, putative, expressed gene NAD dependent epimerase/dehydratase family protein, putative, expressed chr7 24514320 24516759 - promoter 9 LOC_Os06g23660 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 13810200 13811016 - promoter 9 LOC_Os05g20940 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 12313312 12315397 + promoter 9 LOC_Os03g51410 hypothetical protein gene hypothetical protein chr3 29403670 29404131 + promoter 9 LOC_Os03g45830 OsSAUR15 - Auxin-responsive SAUR gene family member gene OsSAUR15 - Auxin-responsive SAUR gene family member chr3 25882322 25882642 + promoter 9 LOC_Os01g42690 OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed gene OsPOP2 - Putative Prolyl Oligopeptidase homologue, expressed chr1 24276051 24280005 + promoter 9 LOC_Os11g20400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 11802963 11807070 + promoter 9 LOC_Os03g03810 DEF8 - Defensin and Defensin-like DEFL family, expressed gene DEF8 - Defensin and Defensin-like DEFL family, expressed chr3 1713568 1714226 + promoter 9 LOC_Os11g31400 expressed protein gene expressed protein chr11 17855399 17856308 + promoter,downstream 9 LOC_Os03g51420 hypothetical protein gene hypothetical protein chr3 29404831 29405184 - promoter 9 LOC_Os02g45840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 27916645 27917802 + promoter 9 LOC_Os09g25370 deoxyhypusine synthase, putative, expressed gene deoxyhypusine synthase, putative, expressed chr9 15203132 15206864 - promoter 9 LOC_Os11g48010 hypothetical protein gene hypothetical protein chr11 28429788 28430060 - promoter 9 LOC_Os02g44850 GDSL-like lipase/acylhydrolase, putative gene GDSL-like lipase/acylhydrolase, putative chr2 27150720 27152112 - promoter 9 LOC_Os03g14820 hypothetical protein gene hypothetical protein chr3 8063451 8064191 + promoter 9 LOC_Os01g18940 hypothetical protein gene hypothetical protein chr1 10702759 10704176 - promoter 9 LOC_Os06g50770 conserved hypothetical protein gene conserved hypothetical protein chr6 30717415 30718931 - promoter 9 LOC_Os01g09130 hypothetical protein gene hypothetical protein chr1 4586086 4586835 + promoter 9 LOC_Os11g05960 hypothetical protein gene hypothetical protein chr11 2805561 2805887 - promoter 9 LOC_Os04g25650 cysteine-rich receptor-like protein kinase, putative, expressed gene cysteine-rich receptor-like protein kinase, putative, expressed chr4 14854167 14855541 - promoter 9 LOC_Os02g40650 hypothetical protein gene hypothetical protein chr2 24637524 24638189 + promoter 9 LOC_Os02g54430 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr2 33343419 33345131 - promoter 9 LOC_Os05g44260 DUF584 domain containing protein, putative, expressed gene DUF584 domain containing protein, putative, expressed chr5 25685991 25686383 + promoter,downstream 9 LOC_Os08g44070 expressed protein gene expressed protein chr8 27753592 27754110 + promoter 9 LOC_Os12g34230 hypothetical protein gene hypothetical protein chr12 20720401 20721200 - promoter 9 LOC_Os10g40660 ZOS10-07 - C2H2 zinc finger protein, expressed gene ZOS10-07 - C2H2 zinc finger protein, expressed chr10 21737739 21739430 - promoter 9 LOC_Os09g31430 Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed gene Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed chr9 18904324 18907427 - promoter 9 LOC_Os02g33390 pectinesterase inhibitor domain containing protein, putative gene pectinesterase inhibitor domain containing protein, putative chr2 19832399 19832950 + promoter,downstream 9 LOC_Os08g37640 hypothetical protein gene hypothetical protein chr8 23846946 23847410 - promoter 9 LOC_Os11g39050 hypothetical protein gene hypothetical protein chr11 22783817 22784386 - promoter 9 LOC_Os08g34910 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr8 21977927 21981341 - promoter 9 LOC_Os03g45130 hypothetical protein gene hypothetical protein chr3 25480547 25480822 - promoter 9 LOC_Os01g48230 hypothetical protein gene hypothetical protein chr1 27650410 27650715 - promoter,downstream 9 LOC_Os06g39130 hypothetical protein gene hypothetical protein chr6 23236937 23237373 + promoter,downstream 9 LOC_Os09g16040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 9795728 9797952 + promoter 9 LOC_Os02g28690 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 16963302 16964414 + promoter 9 LOC_Os04g37460 glutamate decarboxylase, putative, expressed gene glutamate decarboxylase, putative, expressed chr4 22128953 22131315 - promoter 9 LOC_Os04g14820 hypothetical protein gene hypothetical protein chr4 8317932 8318251 - promoter 9 LOC_Os05g06090 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 3044362 3044939 + promoter 9 LOC_Os09g31930 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr9 19039335 19042165 - promoter 9 LOC_Os04g20774 pumilio-family RNA binding repeat containing protein, expressed gene pumilio-family RNA binding repeat containing protein, expressed chr4 11641100 11650855 + promoter 9 LOC_Os02g57780 expressed protein gene expressed protein chr2 35373509 35379278 + promoter,downstream 9 LOC_Os06g01600 hypothetical protein gene hypothetical protein chr6 350614 350976 - promoter 9 LOC_Os01g41420 transmembrane amino acid transporter protein, putative, expressed gene transmembrane amino acid transporter protein, putative, expressed chr1 23446216 23449891 + promoter 9 LOC_Os01g43650 OsWRKY11 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY11 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr1 25008409 25011192 + promoter,downstream 9 LOC_Os11g25030 mitochondrial 2-oxoglutarate/malate translocator, putative gene mitochondrial 2-oxoglutarate/malate translocator, putative chr11 13786623 13786982 - promoter 9 LOC_Os10g35050 aquaporin protein, putative, expressed gene aquaporin protein, putative, expressed chr10 18629689 18631118 + promoter 9 LOC_Os01g10310 conserved hypothetical protein gene conserved hypothetical protein chr1 5423059 5423571 + promoter,downstream 9 LOC_Os01g12110 expressed protein gene expressed protein chr1 6589899 6591136 - promoter,downstream 9 LOC_Os01g45730 zinc finger C-x8-C-x5-C-x3-H type family protein gene zinc finger C-x8-C-x5-C-x3-H type family protein chr1 25959059 25960151 - promoter 9 LOC_Os11g46960 receptor-like protein kinase precursor, putative, expressed gene receptor-like protein kinase precursor, putative, expressed chr11 27701113 27705167 + promoter 9 LOC_Os11g28010 hypothetical protein gene hypothetical protein chr11 15636010 15636815 - promoter 9 LOC_Os04g56710 GTP cyclohydrolase I 1, putative, expressed gene GTP cyclohydrolase I 1, putative, expressed chr4 33629046 33633632 - promoter 9 LOC_Os07g34220 hypothetical protein gene hypothetical protein chr7 20476081 20477176 - promoter 9 LOC_Os12g05715 expressed protein gene expressed protein chr12 2636609 2637460 + promoter 9 LOC_Os04g44880 expressed protein gene expressed protein chr4 26378126 26378422 - promoter,downstream 9 LOC_Os07g02560 NB-ARC domain containing protein, expressed gene NB-ARC domain containing protein, expressed chr7 918573 920478 - promoter 9 LOC_Os01g06250 dirigent, putative gene dirigent, putative chr1 2965324 2966346 + promoter 9 LOC_Os10g26330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 13579746 13580463 - promoter 9 LOC_Os03g08610 leucine-rich repeat family protein, putative, expressed gene leucine-rich repeat family protein, putative, expressed chr3 4433562 4437097 + promoter 9 LOC_Os07g35770 TKL_IRAK_DUF26-ld.4 - DUF26 kinases have homology to DUF26 containing loci gene TKL_IRAK_DUF26-ld.4 - DUF26 kinases have homology to DUF26 containing loci chr7 21425357 21426502 - promoter 9 LOC_Os06g51170 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed gene serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed chr6 30952030 30955666 - promoter,downstream 9 LOC_Os06g16760 hypothetical protein gene hypothetical protein chr6 9708411 9709587 + promoter 9 LOC_Os12g40750 pectinesterase inhibitor domain containing protein, putative gene pectinesterase inhibitor domain containing protein, putative chr12 25199883 25200446 - promoter,downstream 9 LOC_Os08g36710 conserved hypothetical protein gene conserved hypothetical protein chr8 23158254 23160781 - promoter 9 LOC_Os06g51050 CHIT7 - Chitinase family protein precursor, expressed gene CHIT7 - Chitinase family protein precursor, expressed chr6 30886217 30887473 + promoter,downstream 9 LOC_Os05g51670 NAD dependent epimerase/dehydratase family protein, putative, expressed gene NAD dependent epimerase/dehydratase family protein, putative, expressed chr5 29569328 29573211 + promoter 9 LOC_Os03g15100 conserved hypothetical protein gene conserved hypothetical protein chr3 8247492 8248340 + promoter 9 LOC_Os11g08190 aspartic proteinase Asp1 precursor, putative gene aspartic proteinase Asp1 precursor, putative chr11 4284877 4287163 + promoter 9 LOC_Os07g40840 hypothetical protein gene hypothetical protein chr7 24467751 24468084 - promoter,downstream 9 LOC_Os01g08260 pleiotropic drug resistance protein 4, putative, expressed gene pleiotropic drug resistance protein 4, putative, expressed chr1 4032751 4036473 - promoter 9 LOC_Os01g47290 expressed protein gene expressed protein chr1 27030735 27031675 + promoter 9 LOC_Os01g05400 conserved hypothetical protein gene conserved hypothetical protein chr1 2549946 2551121 + promoter 9 LOC_Os04g32760 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 19588843 19590043 + promoter 9 LOC_Os02g56870 DEFL38 - Defensin and Defensin-like DEFL family gene DEFL38 - Defensin and Defensin-like DEFL family chr2 34855907 34856271 - promoter 9 LOC_Os01g60309 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 34887270 34891764 + promoter 9 LOC_Os04g24500 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 14040825 14042691 + promoter 9 LOC_Os02g43780 hAT dimerisation domain-containing protein, putative gene hAT dimerisation domain-containing protein, putative chr2 26407575 26409920 - promoter 9 LOC_Os03g49970 hypothetical protein gene hypothetical protein chr3 28485550 28486767 - promoter 9 LOC_Os04g58669 unknown gene unknown chr4 34705765 34706026 + promoter 9 LOC_Os03g43420 single-stranded DNA-binding protein, putative, expressed gene single-stranded DNA-binding protein, putative, expressed chr3 24213300 24217527 - promoter 9 LOC_Os01g72049 retrotransposon, putative, centromere-specific, expressed gene retrotransposon, putative, centromere-specific, expressed chr1 41780267 41807035 - promoter 9 LOC_Os07g34380 hypothetical protein gene hypothetical protein chr7 20601668 20603050 - promoter 9 LOC_Os06g16120 expressed protein gene expressed protein chr6 9176214 9177444 - promoter 9 LOC_Os05g45000 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative chr5 26096731 26098163 + promoter 9 LOC_Os05g42160 hypothetical protein gene hypothetical protein chr5 24584830 24585192 + promoter,downstream 9 LOC_Os12g34680 hypothetical protein gene hypothetical protein chr12 21019319 21020325 - promoter 9 LOC_Os08g01120 sulfate transporter, putative, expressed gene sulfate transporter, putative, expressed chr8 85335 87510 + promoter 9 LOC_Os06g11850 hypothetical protein gene hypothetical protein chr6 6294653 6298081 - promoter 9 LOC_Os07g37610 B3 DNA binding domain containing protein, putative, expressed gene B3 DNA binding domain containing protein, putative, expressed chr7 22533907 22541790 + promoter 9 LOC_Os05g51100 OsFBX179 - F-box domain containing protein gene OsFBX179 - F-box domain containing protein chr5 29253954 29254442 + promoter 9 LOC_Os11g19240 transmembrane amino acid transporter protein, putative gene transmembrane amino acid transporter protein, putative chr11 10993302 10994994 + promoter 9 LOC_Os10g38730 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr10 20559539 20560391 + promoter 9 LOC_Os05g43220 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 25071074 25075071 + promoter 9 LOC_Os07g32280 hypothetical protein gene hypothetical protein chr7 19182983 19183718 + promoter,downstream 9 LOC_Os11g03380 expressed protein gene expressed protein chr11 1273455 1278092 - promoter 9 LOC_Os02g12240 hypothetical protein gene hypothetical protein chr2 6376517 6377029 + promoter 9 LOC_Os07g14120 transferase, putative gene transferase, putative chr7 8057935 8059367 + promoter 9 LOC_Os01g22600 mitochondrial carrier protein, putative, expressed gene mitochondrial carrier protein, putative, expressed chr1 12703674 12708782 - promoter 9 LOC_Os07g06400 hypothetical protein gene hypothetical protein chr7 3108947 3109786 + promoter 9 LOC_Os01g66130 armadillo/beta-catenin repeat family protein, putative, expressed gene armadillo/beta-catenin repeat family protein, putative, expressed chr1 38408158 38412022 + promoter 9 LOC_Os05g06150 vegetative storage protein, putative, expressed gene vegetative storage protein, putative, expressed chr5 3083783 3085480 + promoter 9 LOC_Os01g65550 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr1 38046995 38053314 + promoter 9 LOC_Os04g47090 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 27776395 27777794 - promoter 9 LOC_Os10g31700 hypothetical protein gene hypothetical protein chr10 16545396 16547103 - promoter 9 LOC_Os01g14280 hypothetical protein gene hypothetical protein chr1 8003080 8004216 - promoter 9 LOC_Os12g28780 hypothetical protein gene hypothetical protein chr12 17009604 17009849 - promoter 9 LOC_Os08g02750 expressed protein gene expressed protein chr8 1153882 1155430 + promoter,downstream 9 LOC_Os09g39760 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr9 22804187 22806568 + promoter 9 LOC_Os09g08820 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 4650098 4651737 + promoter 9 LOC_Os09g34850 POLD4A - Putative DNA polymerase delta complex subunit, expressed gene POLD4A - Putative DNA polymerase delta complex subunit, expressed chr9 20313086 20315233 - promoter 9 LOC_Os02g43040 expressed protein gene expressed protein chr2 25906943 25911158 - promoter 9 LOC_Os10g37590 hypothetical protein gene hypothetical protein chr10 20041802 20042872 - promoter 9 LOC_Os06g04500 cornichon protein, putative, expressed gene cornichon protein, putative, expressed chr6 1926257 1929884 + promoter 9 LOC_Os04g44400 OsClp7 - Putative Clp protease homologue, expressed gene OsClp7 - Putative Clp protease homologue, expressed chr4 26099530 26100753 + promoter 9 LOC_Os04g42580 carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed gene carboxyvinyl-carboxyphosphonate phosphorylmutase, putative, expressed chr4 25002712 25007606 + promoter 9 LOC_Os03g25554 hypothetical protein gene hypothetical protein chr3 14600496 14600946 - promoter,downstream 9 LOC_Os11g02350 LTPL25 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL25 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 683614 684629 + promoter 9 LOC_Os12g36700 hypothetical protein gene hypothetical protein chr12 22448593 22449262 - promoter 9 LOC_Os08g34249 inhibitor I family protein, putative gene inhibitor I family protein, putative chr8 21471851 21472164 + promoter 9 LOC_Os06g22919 DEFL9 - Defensin and Defensin-like DEFL family, expressed gene DEFL9 - Defensin and Defensin-like DEFL family, expressed chr6 13374504 13389471 + promoter 9 LOC_Os03g07840 adenylosuccinate synthetase, chloroplast precursor, putative, expressed gene adenylosuccinate synthetase, chloroplast precursor, putative, expressed chr3 3985725 3988995 - promoter 9 LOC_Os07g03120 expressed protein gene expressed protein chr7 1193383 1194595 + promoter 9 LOC_Os01g11810 powdery mildew resistant protein 5, putative, expressed gene powdery mildew resistant protein 5, putative, expressed chr1 6386691 6390467 - promoter 9 LOC_Os04g04620 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 2211752 2212168 - promoter 9 LOC_Os07g06148 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 2993041 2993337 - promoter 9 LOC_Os02g46473 expressed protein gene expressed protein chr2 28312862 28313439 - promoter 9 LOC_Os07g04070 hypothetical protein gene hypothetical protein chr7 1721715 1722419 - promoter 9 LOC_Os08g39930 expressed protein gene expressed protein chr8 25299246 25299575 - promoter,downstream 9 LOC_Os09g22210 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr9 13433663 13434462 - promoter 9 LOC_Os07g35810 TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-ld.6 - DUF26 kinases have homology to DUF26 containing loci, expressed chr7 21440044 21443830 - promoter 9 LOC_Os06g30030 DUF617 domain containing protein gene DUF617 domain containing protein chr6 17284061 17285051 + promoter,downstream 9 LOC_Os04g24328 jasmonate-induced protein, putative, expressed gene jasmonate-induced protein, putative, expressed chr4 13928659 13929868 + promoter 9 LOC_Os12g21860 expressed protein gene expressed protein chr12 12303451 12308348 + promoter 9 LOC_Os02g39250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 23701742 23703321 - promoter 9 LOC_Os12g34790 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 21089469 21090009 + promoter 9 LOC_Os11g10210 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 5536298 5536774 + promoter 9 LOC_Os11g12590 hypothetical protein gene hypothetical protein chr11 7068168 7071343 + promoter 9 LOC_Os12g32930 conserved hypothetical protein gene conserved hypothetical protein chr12 19865970 19867224 - promoter 9 LOC_Os02g13690 hypothetical protein gene hypothetical protein chr2 7346820 7347587 - promoter,downstream 9 LOC_Os08g01290 OsFBT12 - F-box and tubby domain containing protein, expressed gene OsFBT12 - F-box and tubby domain containing protein, expressed chr8 185944 190880 + promoter 9 LOC_Os04g02590 hypothetical protein gene hypothetical protein chr4 967078 967461 - promoter 9 LOC_Os10g29350 hypothetical protein gene hypothetical protein chr10 15190872 15192598 + promoter 9 LOC_Os02g56770 OsFBX67 - F-box domain containing protein, expressed gene OsFBX67 - F-box domain containing protein, expressed chr2 34796215 34796659 + promoter 9 LOC_Os03g18390 hypothetical protein gene hypothetical protein chr3 10311185 10312338 + promoter 9 LOC_Os08g03840 expressed protein gene expressed protein chr8 1832545 1835637 + promoter 9 LOC_Os11g35870 RWD domain containing protein, expressed gene RWD domain containing protein, expressed chr11 20584801 20590081 - promoter 9 LOC_Os11g05460 hypothetical protein gene hypothetical protein chr11 2445811 2447095 - promoter 9 LOC_Os07g48720 MAG2, putative, expressed gene MAG2, putative, expressed chr7 29173000 29177478 + promoter 9 LOC_Os03g49840 hypothetical protein gene hypothetical protein chr3 28392539 28393281 + promoter,downstream 9 LOC_Os04g34480 plastocyanin-like domain containing protein, putative gene plastocyanin-like domain containing protein, putative chr4 20708829 20709426 - promoter 9 LOC_Os03g58364 hypothetical protein gene hypothetical protein chr3 33245290 33246196 - promoter 9 LOC_Os03g03260 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr3 1393427 1399137 + promoter 9 LOC_Os09g13280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 7657654 7658334 + promoter 9 LOC_Os12g32160 hypothetical protein gene hypothetical protein chr12 19376658 19379532 - promoter 9 LOC_Os08g23950 hypothetical protein gene hypothetical protein chr8 14484989 14486771 - promoter 9 LOC_Os06g50809 UPF0496 protein 2, putative gene UPF0496 protein 2, putative chr6 30747993 30748679 + promoter 9 LOC_Os01g03260 hypothetical protein gene hypothetical protein chr1 1314823 1318863 - promoter 9 LOC_Os05g50360 anaphase-promoting complex subunit 10, putative, expressed gene anaphase-promoting complex subunit 10, putative, expressed chr5 28792160 28795173 + promoter 9 LOC_Os06g22120 hypothetical protein gene hypothetical protein chr6 12838382 12840368 + promoter 9 LOC_Os03g51724 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr3 29639856 29641132 + promoter 9 LOC_Os08g09490 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 5494886 5496389 + promoter 9 LOC_Os03g46030 hypothetical protein gene hypothetical protein chr3 26014009 26014431 + promoter 9 LOC_Os12g23940 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr12 13600373 13601551 + promoter 9 LOC_Os10g05140 hypothetical protein gene hypothetical protein chr10 2508494 2508885 + promoter,downstream 9 LOC_Os05g48750 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed gene 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed chr5 27873483 27876701 - promoter 9 LOC_Os06g50370 zinc finger, C3HC4 type, domain containing protein, expressed gene zinc finger, C3HC4 type, domain containing protein, expressed chr6 30491762 30495153 + promoter 9 LOC_Os04g31610 OsFBO3 - F-box and other domain containing protein, expressed gene OsFBO3 - F-box and other domain containing protein, expressed chr4 18733498 18735200 - promoter 9 LOC_Os01g13880 hypothetical protein gene hypothetical protein chr1 7779251 7780054 + promoter 9 LOC_Os10g40880 flavonol synthase/flavanone 3-hydroxylase, putative, expressed gene flavonol synthase/flavanone 3-hydroxylase, putative, expressed chr10 21897401 21898977 - promoter 9 LOC_Os05g27600 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 16003546 16006032 + promoter 9 LOC_Os11g41330 hypothetical protein gene hypothetical protein chr11 24318754 24318996 - promoter 9 LOC_Os02g50470 expressed protein gene expressed protein chr2 30807613 30808852 + promoter 9 LOC_Os10g43030 conserved hypothetical protein gene conserved hypothetical protein chr10 23113630 23114274 - promoter 9 LOC_Os08g43030 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 27196676 27197674 - promoter 9 LOC_Os07g09080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 4749248 4750994 + promoter 9 LOC_Os11g06520 thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein gene thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein chr11 3143396 3143821 + promoter,downstream 9 LOC_Os02g48290 thioredoxin reductase 2, putative, expressed gene thioredoxin reductase 2, putative, expressed chr2 29545079 29548380 + promoter 9 LOC_Os01g11289 unknown gene unknown chr1 6041705 6041976 + promoter 9 LOC_Os06g49770 LTPL86 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL86 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr6 30112942 30114512 + promoter 9 LOC_Os06g37500 cytokinin dehydrogenase precursor, putative gene cytokinin dehydrogenase precursor, putative chr6 22191036 22193966 - promoter 9 LOC_Os01g11300 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 6056440 6058109 - promoter 9 LOC_Os09g25030 hypothetical protein gene hypothetical protein chr9 14956166 14956735 + promoter 9 LOC_Os03g47130 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr3 26661855 26667731 - promoter 9 LOC_Os04g08650 hypothetical protein gene hypothetical protein chr4 4691153 4692173 + promoter 9 LOC_Os06g36340 conserved hypothetical protein gene conserved hypothetical protein chr6 21325481 21329847 + promoter 9 LOC_Os05g43080 GDSL-motif lipase/hydrolase, putative gene GDSL-motif lipase/hydrolase, putative chr5 24959574 24959902 - promoter 9 LOC_Os11g30060 NBS-LRR type disease resistance protein Hom-B, putative gene NBS-LRR type disease resistance protein Hom-B, putative chr11 17018715 17023410 + promoter 9 LOC_Os04g04070 hypothetical protein gene hypothetical protein chr4 1873657 1875475 - promoter 9 LOC_Os02g03210 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr2 1273223 1275549 - promoter,downstream 9 LOC_Os01g21100 conserved hypothetical protein gene conserved hypothetical protein chr1 11773370 11773984 + promoter 9 LOC_Os11g42390 OsSCP64 - Putative Serine Carboxypeptidase homologue, expressed gene OsSCP64 - Putative Serine Carboxypeptidase homologue, expressed chr11 25043426 25049557 + promoter 9 LOC_Os11g44130 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 26173658 26173984 + promoter 9 LOC_Os04g46390 chaperone protein dnaJ, putative, expressed gene chaperone protein dnaJ, putative, expressed chr4 27320348 27324909 + promoter 9 LOC_Os09g16170 hypothetical protein gene hypothetical protein chr9 9860268 9861866 - promoter 9 LOC_Os12g43140 late embryogenesis abundant protein D-34, putative, expressed gene late embryogenesis abundant protein D-34, putative, expressed chr12 26759679 26760353 + promoter,downstream 9 LOC_Os09g39010 unknown gene unknown chr9 22396042 22396463 - promoter 9 LOC_Os01g52780 HVA22, putative, expressed gene HVA22, putative, expressed chr1 30362018 30369168 - promoter 9 LOC_Os05g13550 hypothetical protein gene hypothetical protein chr5 7518854 7519321 - promoter 9 LOC_Os10g30770 inorganic phosphate transporter, putative, expressed gene inorganic phosphate transporter, putative, expressed chr10 15956631 15958211 + promoter 9 LOC_Os08g44920 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 28201996 28202547 - promoter 9 LOC_Os01g14220 expressed protein gene expressed protein chr1 7970864 7973941 - promoter,downstream 9 LOC_Os06g41860 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr6 25097253 25098156 + promoter,downstream 9 LOC_Os06g46170 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 27980348 27983830 + promoter 9 LOC_Os01g74146 WD repeat-containing protein, putative, expressed gene WD repeat-containing protein, putative, expressed chr1 42948370 42951670 + promoter 9 LOC_Os09g15510 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr9 9489520 9491543 - promoter,downstream 9 LOC_Os09g22530 expressed protein gene expressed protein chr9 13584768 13585925 + promoter 9 LOC_Os07g02410 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 825193 826749 + promoter 9 LOC_Os10g40180 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 21435379 21441177 + promoter 9 LOC_Os07g44690 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr7 26672645 26675938 + promoter 9 LOC_Os05g42424 ubiquitin family protein, putative, expressed gene ubiquitin family protein, putative, expressed chr5 24799824 24802442 + promoter 9 LOC_Os06g06540 AP2 domain containing protein gene AP2 domain containing protein chr6 3066710 3067738 + promoter 9 LOC_Os02g43590 ELMO/CED-12 family protein, putative, expressed gene ELMO/CED-12 family protein, putative, expressed chr2 26291008 26295465 - promoter 9 LOC_Os12g02300 LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL26 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr12 726800 727701 + promoter 9 LOC_Os07g06210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 3026556 3026852 - promoter 9 LOC_Os09g07360 frigida, putative, expressed gene frigida, putative, expressed chr9 3655769 3664430 - promoter 9 LOC_Os03g21070 hypothetical protein gene hypothetical protein chr3 11986266 11987033 + promoter 9 LOC_Os06g03230 hypothetical protein gene hypothetical protein chr6 1219785 1220327 + promoter 9 LOC_Os07g04360 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 1930422 1934360 + promoter 9 LOC_Os08g28410 retinal pigment epithelial membrane protein, expressed gene retinal pigment epithelial membrane protein, expressed chr8 17336062 17346257 - promoter 9 LOC_Os04g42840 HEAT repeat family protein, putative, expressed gene HEAT repeat family protein, putative, expressed chr4 25164605 25175954 - promoter 9 LOC_Os10g28260 hypothetical protein gene hypothetical protein chr10 14630811 14631835 + promoter 9 LOC_Os01g59480 hypothetical protein gene hypothetical protein chr1 34400669 34402063 + promoter 9 LOC_Os03g44170 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr3 24823455 24824656 - promoter 9 LOC_Os01g67650 gibberellin response modulator protein, putative gene gibberellin response modulator protein, putative chr1 39318346 39319944 + promoter,downstream 9 LOC_Os01g67990 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 39511217 39513945 - promoter 9 LOC_Os07g40010 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 23998453 23999996 + promoter 9 LOC_Os12g02030 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed gene BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed chr12 601656 603538 - promoter 9 LOC_Os04g35690 tetratricopeptide repeat, putative, expressed gene tetratricopeptide repeat, putative, expressed chr4 21578967 21580409 + promoter 9 LOC_Os06g17280 PHD-finger family protein, expressed gene PHD-finger family protein, expressed chr6 10002547 10006034 + promoter 9 LOC_Os09g18340 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 11249798 11252334 + promoter 9 LOC_Os04g09380 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 4994470 4999375 + promoter 9 LOC_Os01g34570 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 19061378 19062922 + promoter 9 LOC_Os08g28940 OsFBX289 - F-box domain containing protein, expressed gene OsFBX289 - F-box domain containing protein, expressed chr8 17696411 17701132 + promoter 9 LOC_Os11g45260 hypothetical protein gene hypothetical protein chr11 26918497 26918772 + promoter 9 LOC_Os01g28100 hypothetical protein gene hypothetical protein chr1 15725196 15725772 + promoter 9 LOC_Os01g18610 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr1 10479847 10482493 + promoter 9 LOC_Os07g45090 NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed gene NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed chr7 26912470 26916502 + promoter 9 LOC_Os07g03427 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 1370130 1372955 + promoter 9 LOC_Os06g12630 glutathione S-transferase, N-terminal domain containing protein, expressed gene glutathione S-transferase, N-terminal domain containing protein, expressed chr6 6889586 6894645 - promoter 9 LOC_Os08g33880 zinc finger A20 and AN1 domain-containing stress-associated protein, putative gene zinc finger A20 and AN1 domain-containing stress-associated protein, putative chr8 21202775 21203449 + promoter,downstream 9 LOC_Os03g02960 nascent polypeptide-associated complex subunit alpha, putative, expressed gene nascent polypeptide-associated complex subunit alpha, putative, expressed chr3 1193253 1195503 + promoter 9 LOC_Os01g39180 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr1 22041885 22044269 + promoter 9 LOC_Os07g06355 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 3090815 3093756 + promoter 9 LOC_Os11g28380 hypothetical protein gene hypothetical protein chr11 15875021 15875458 - promoter 9 LOC_Os09g07709 unknown gene unknown chr9 3890091 3890377 - promoter 9 LOC_Os05g23410 hypothetical protein gene hypothetical protein chr5 13315667 13316976 + promoter 9 LOC_Os12g11630 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 6301408 6304663 + promoter 9 LOC_Os02g34320 basic helix-loop-helix, putative gene basic helix-loop-helix, putative chr2 20529453 20532881 + promoter 9 LOC_Os06g48870 methyl-binding domain protein MBD, putative, expressed gene methyl-binding domain protein MBD, putative, expressed chr6 29589660 29594772 + promoter 9 LOC_Os12g26400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 15422432 15428045 + promoter 9 LOC_Os12g41320 hypothetical protein gene hypothetical protein chr12 25582090 25582524 - promoter 9 LOC_Os09g16760 ankyrin repeat family protein, putative, expressed gene ankyrin repeat family protein, putative, expressed chr9 10251138 10253786 + promoter 9 LOC_Os08g44680 photosystem I reaction center subunit II, chloroplast precursor, putative, expressed gene photosystem I reaction center subunit II, chloroplast precursor, putative, expressed chr8 28080579 28081584 - promoter 9 LOC_Os04g58120 CRP2 - Cysteine-rich family protein precursor, expressed gene CRP2 - Cysteine-rich family protein precursor, expressed chr4 34427482 34428503 + promoter 9 LOC_Os04g39240 expressed protein gene expressed protein chr4 23145984 23151800 - promoter 9 LOC_Os10g26010 cystathionine gamma-synthase, putative, expressed gene cystathionine gamma-synthase, putative, expressed chr10 13396367 13398136 + promoter 9 LOC_Os12g39770 conserved hypothetical protein gene conserved hypothetical protein chr12 24524789 24525499 + promoter 9 LOC_Os10g38090 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 20323068 20327819 - promoter 9 LOC_Os01g43500 hypothetical protein gene hypothetical protein chr1 24903275 24906715 + promoter 9 LOC_Os02g57730 hypothetical protein gene hypothetical protein chr2 35346072 35347837 - promoter 9 LOC_Os11g41870 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr11 24708854 24710661 - promoter 9 LOC_Os08g38660 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 24426127 24431480 + promoter 9 LOC_Os07g40030 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr7 24019383 24024151 + promoter 9 LOC_Os09g31000 EF hand family protein, expressed gene EF hand family protein, expressed chr9 18661881 18662720 + promoter,downstream 9 LOC_Os07g41230 esterase, putative, expressed gene esterase, putative, expressed chr7 24698501 24702800 + promoter 9 LOC_Os09g17540 OsFBX322 - F-box domain containing protein, expressed gene OsFBX322 - F-box domain containing protein, expressed chr9 10732801 10734332 + promoter 9 LOC_Os02g46790 hypothetical protein gene hypothetical protein chr2 28561161 28561511 + promoter 9 LOC_Os10g05930 POEI10 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI10 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2989874 2990993 + promoter,downstream 9 LOC_Os03g20230 aspartic proteinase nepenthesin-1 precursor, putative gene aspartic proteinase nepenthesin-1 precursor, putative chr3 11427675 11428829 + promoter 9 LOC_Os01g57630 pentatricopeptide containing protein, putative, expressed gene pentatricopeptide containing protein, putative, expressed chr1 33316991 33321866 + promoter 9 LOC_Os04g54720 hypothetical protein gene hypothetical protein chr4 32360407 32362191 + promoter 9 LOC_Os11g08450 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 4456507 4458300 - promoter,downstream 9 LOC_Os02g43580 hypothetical protein gene hypothetical protein chr2 26287318 26287560 - promoter,downstream 9 LOC_Os04g44240 cytokinin-O-glucosyltransferase 3, putative, expressed gene cytokinin-O-glucosyltransferase 3, putative, expressed chr4 26020913 26022777 - promoter 9 LOC_Os04g24350 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 13943172 13947141 + promoter 9 LOC_Os05g39310 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein gene thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein chr5 22996378 22998705 + promoter 9 LOC_Os06g47240 hypothetical protein gene hypothetical protein chr6 28641657 28641960 + promoter 9 LOC_Os01g55110 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr1 31709592 31710906 + promoter 9 LOC_Os01g18790 conserved hypothetical protein gene conserved hypothetical protein chr1 10596775 10597278 + promoter 9 LOC_Os02g53900 hypothetical protein gene hypothetical protein chr2 32998380 32998763 + promoter,downstream 9 LOC_Os08g26430 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr8 16100782 16105870 + promoter 9 LOC_Os03g45810 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 25865870 25869476 - promoter 9 LOC_Os03g46070 thaumatin, putative, expressed gene thaumatin, putative, expressed chr3 26032445 26033376 - promoter,downstream 9 LOC_Os02g44840 hypothetical protein gene hypothetical protein chr2 27149615 27150229 - promoter 9 LOC_Os03g36900 expressed protein gene expressed protein chr3 20475108 20479069 - promoter 9 LOC_Os04g49000 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr4 29028048 29029287 - promoter 9 LOC_Os01g61620 protein kinase family protein, putative, expressed gene protein kinase family protein, putative, expressed chr1 35652143 35657363 + promoter 9 LOC_Os08g10730 expressed protein gene expressed protein chr8 6312877 6314627 - promoter 9 LOC_Os01g49180 ATP dependent DNA ligase family protein, putative, expressed gene ATP dependent DNA ligase family protein, putative, expressed chr1 28260371 28272023 - promoter 9 LOC_Os10g39070 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr10 20753612 20755748 - promoter 9 LOC_Os01g12160 OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed gene OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed chr1 6623963 6629463 - promoter 9 LOC_Os07g31970 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 19010751 19017328 + promoter 9 LOC_Os02g53870 expressed protein gene expressed protein chr2 32985610 32986342 + promoter 9 LOC_Os10g05170 OsWAK100 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK gene OsWAK100 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK chr10 2522948 2523430 + promoter 9 LOC_Os01g67780 unknown gene unknown chr1 39397412 39399103 - promoter,downstream 9 LOC_Os04g28160 response regulator receiver domain containing protein, expressed gene response regulator receiver domain containing protein, expressed chr4 16457957 16461123 + promoter 9 LOC_Os01g65440 universal stress protein domain containing protein, putative, expressed gene universal stress protein domain containing protein, putative, expressed chr1 37981806 37984667 + promoter 9 LOC_Os03g59020 T-complex protein, putative, expressed gene T-complex protein, putative, expressed chr3 33585622 33590944 + promoter 9 LOC_Os11g01400 hypothetical protein gene hypothetical protein chr11 246082 249718 + promoter 9 LOC_Os12g28560 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 16869655 16873008 + promoter 9 LOC_Os02g03920 hypothetical protein gene hypothetical protein chr2 1666678 1667007 + promoter 9 LOC_Os03g24260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 13800871 13805786 + promoter 9 LOC_Os01g03710 mannose-6-phosphate isomerase, putative, expressed gene mannose-6-phosphate isomerase, putative, expressed chr1 1533135 1538627 + promoter,downstream 9 LOC_Os04g33380 hypothetical protein gene hypothetical protein chr4 20042984 20043697 - promoter 9 LOC_Os03g27054 hypothetical protein gene hypothetical protein chr3 15485693 15486550 + promoter 9 LOC_Os08g42530 SFC, putative, expressed gene SFC, putative, expressed chr8 26868563 26877272 - promoter 9 LOC_Os11g31510 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr11 17950905 17952134 + promoter 9 LOC_Os03g09130 hypothetical protein gene hypothetical protein chr3 4759613 4762103 + promoter 9 LOC_Os11g15500 stripe rust resistance protein Yr10, putative gene stripe rust resistance protein Yr10, putative chr11 8774623 8777725 + promoter 9 LOC_Os01g27710 hypothetical protein gene hypothetical protein chr1 15447975 15448586 + promoter 9 LOC_Os12g02380 elongation factor P, putative, expressed gene elongation factor P, putative, expressed chr12 775593 778942 + promoter 9 LOC_Os01g21020 hypothetical protein gene hypothetical protein chr1 11736839 11737341 + promoter 9 LOC_Os07g49100 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr7 29387049 29389122 + promoter 9 LOC_Os11g09740 hypothetical protein gene hypothetical protein chr11 5194272 5195828 - promoter,downstream 9 LOC_Os01g57620 expressed protein gene expressed protein chr1 33315995 33316868 - promoter 9 LOC_Os12g39950 hypothetical protein gene hypothetical protein chr12 24654676 24659054 + promoter 9 LOC_Os07g23560 hypothetical protein gene hypothetical protein chr7 13321181 13322051 + promoter,downstream 9 LOC_Os01g28690 nucleoporin autopeptidase domain containing protein, expressed gene nucleoporin autopeptidase domain containing protein, expressed chr1 16060921 16066636 + promoter 9 LOC_Os02g44290 phosphatase, putative, expressed gene phosphatase, putative, expressed chr2 26791456 26793339 + promoter 9 LOC_Os02g27840 hypothetical protein gene hypothetical protein chr2 16479491 16480909 - promoter 9 LOC_Os11g05440 hypothetical protein gene hypothetical protein chr11 2441129 2441608 - promoter 9 LOC_Os07g34770 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 20826753 20833461 - promoter 9 LOC_Os02g36239 unknown gene unknown chr2 21873425 21873643 + promoter 9 LOC_Os01g50890 hypothetical protein gene hypothetical protein chr1 29229912 29230172 - promoter 9 LOC_Os06g30840 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 17894244 17898067 + promoter 9 LOC_Os01g20208 expressed protein gene expressed protein chr1 11514295 11514963 + promoter 9 LOC_Os08g34640 receptor-like protein kinase precursor, putative, expressed gene receptor-like protein kinase precursor, putative, expressed chr8 21753813 21759439 - promoter 9 LOC_Os04g33940 protein of unknown function DUF1279 domain containing protein, expressed gene protein of unknown function DUF1279 domain containing protein, expressed chr4 20376899 20379003 + promoter 9 LOC_Os04g42060 cytochrome c oxidase subunit, putative, expressed gene cytochrome c oxidase subunit, putative, expressed chr4 24721427 24724028 - promoter 9 LOC_Os10g21140 hypothetical protein gene hypothetical protein chr10 10681748 10682507 + promoter 9 LOC_Os11g05420 hypothetical protein gene hypothetical protein chr11 2433667 2435897 + promoter 9 LOC_Os11g15379 unknown gene unknown chr11 8700497 8700694 + promoter 9 LOC_Os07g32810 conserved hypothetical protein gene conserved hypothetical protein chr7 19630213 19630689 - promoter 9 LOC_Os09g09750 disease resistance protein RPM1, putative, expressed gene disease resistance protein RPM1, putative, expressed chr9 5275098 5277927 + promoter 9 LOC_Os07g06810 conserved hypothetical protein gene conserved hypothetical protein chr7 3318339 3320991 - promoter,downstream 9 LOC_Os05g48580 conserved hypothetical protein gene conserved hypothetical protein chr5 27776734 27777819 - promoter 9 LOC_Os03g26080 nucleoside-triphosphatase, putative, expressed gene nucleoside-triphosphatase, putative, expressed chr3 14937104 14940950 + promoter 9 LOC_Os05g49785 unknown gene unknown chr5 28514007 28514214 + promoter,downstream 9 LOC_Os02g54530 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr2 33399166 33399736 + promoter 9 LOC_Os05g37040 MYB family transcription factor, putative gene MYB family transcription factor, putative chr5 21584362 21585144 - promoter 9 LOC_Os04g43340 disease resistance RPP13-like protein 1, putative, expressed gene disease resistance RPP13-like protein 1, putative, expressed chr4 25446696 25451703 - promoter 9 LOC_Os08g40730 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 25770929 25771768 + promoter 9 LOC_Os03g03020 L11 domain containing ribosomal protein, putative, expressed gene L11 domain containing ribosomal protein, putative, expressed chr3 1231212 1233474 - promoter 9 LOC_Os01g52560 Plant PDR ABC transporter associated domain containing protein, expressed gene Plant PDR ABC transporter associated domain containing protein, expressed chr1 30215002 30221930 + promoter 9 LOC_Os03g20000 hypothetical protein gene hypothetical protein chr3 11269515 11269820 + promoter 9 LOC_Os03g61330 fumarylacetoacetase, putative, expressed gene fumarylacetoacetase, putative, expressed chr3 34809995 34813241 - promoter 9 LOC_Os09g08590 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 4477192 4480656 + promoter 9 LOC_Os02g03930 expressed protein gene expressed protein chr2 1667744 1672318 - promoter 9 LOC_Os11g42590 conserved hypothetical protein gene conserved hypothetical protein chr11 25167005 25172771 + promoter 9 LOC_Os06g50480 bZIP transcription factor domain containing protein gene bZIP transcription factor domain containing protein chr6 30563133 30566038 + promoter 9 LOC_Os02g06580 formin, putative, expressed gene formin, putative, expressed chr2 3291233 3295478 + promoter 9 LOC_Os06g50250 conserved hypothetical protein gene conserved hypothetical protein chr6 30421609 30422507 - promoter 9 LOC_Os02g17180 OsFBX42 - F-box domain containing protein gene OsFBX42 - F-box domain containing protein chr2 9838335 9839477 + promoter 9 LOC_Os05g11428 expressed protein gene expressed protein chr5 6468075 6476395 - promoter 9 LOC_Os07g13700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 7863478 7866390 + promoter 9 LOC_Os09g37967 cupin domain containing protein, expressed gene cupin domain containing protein, expressed chr9 21891330 21892804 - promoter,downstream 9 LOC_Os03g43090 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 24035009 24042255 - promoter,downstream 9 LOC_Os06g08530 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed gene ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed chr6 4212120 4217604 - promoter 9 LOC_Os10g03570 RGH1A, putative, expressed gene RGH1A, putative, expressed chr10 1539540 1545380 - promoter 9 LOC_Os05g13660 hypothetical protein gene hypothetical protein chr5 7566322 7567599 + promoter 9 LOC_Os02g03650 expressed protein gene expressed protein chr2 1518563 1523179 + promoter 9 LOC_Os08g43080 POLD4B - Putative DNA polymerase delta complex subunit gene POLD4B - Putative DNA polymerase delta complex subunit chr8 27226532 27227028 - promoter 9 LOC_Os02g39764 expressed protein gene expressed protein chr2 24019287 24026406 - promoter 9 LOC_Os08g39260 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 24810305 24811450 + promoter 9 LOC_Os06g23170 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 13523541 13531870 + promoter 9 LOC_Os10g33810 myb-related protein Myb4, putative, expressed gene myb-related protein Myb4, putative, expressed chr10 17852367 17855091 - promoter 9 LOC_Os12g35700 conserved hypothetical protein gene conserved hypothetical protein chr12 21668972 21670399 - promoter 9 LOC_Os08g14900 hypothetical protein gene hypothetical protein chr8 8977312 8977620 + promoter,downstream 9 LOC_Os09g24520 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr9 14602950 14606124 - promoter 9 LOC_Os11g31010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 17571688 17573900 - promoter,downstream 9 LOC_Os01g27600 expressed protein gene expressed protein chr1 15392412 15394743 + promoter 9 LOC_Os11g30570 hypothetical protein gene hypothetical protein chr11 17326932 17329051 - promoter 9 LOC_Os01g68670 cysteine proteinase inhibitor precursor, putative gene cysteine proteinase inhibitor precursor, putative chr1 39877916 39878362 + promoter 9 LOC_Os07g47340 expressed protein gene expressed protein chr7 28307431 28310589 - promoter 9 LOC_Os05g24780 OsCML21 - Calmodulin-related calcium sensor protein, expressed gene OsCML21 - Calmodulin-related calcium sensor protein, expressed chr5 14303277 14304131 - promoter 9 LOC_Os12g28150 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 16616434 16620306 + promoter 9 LOC_Os08g30300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 18637563 18639511 + promoter 9 LOC_Os10g42620 dihydroflavonol-4-reductase, putative, expressed gene dihydroflavonol-4-reductase, putative, expressed chr10 22910074 22914797 + promoter 9 LOC_Os08g34510 hypothetical protein gene hypothetical protein chr8 21651102 21651383 - promoter,downstream 9 LOC_Os04g58970 uncharacterized ACR, YggU family COG1872 containing protein, expressed gene uncharacterized ACR, YggU family COG1872 containing protein, expressed chr4 34899197 34901165 - promoter 9 LOC_Os08g37040 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr8 23408832 23410186 - promoter,downstream 9 LOC_Os01g73604 LSM domain containing protein gene LSM domain containing protein chr1 42637812 42643900 - promoter 9 LOC_Os06g44970 auxin efflux carrier component, putative, expressed gene auxin efflux carrier component, putative, expressed chr6 27199809 27203765 + promoter 9 LOC_Os12g33050 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 19939829 19945951 + promoter 9 LOC_Os11g37590 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr11 21723417 21726698 + promoter 9 LOC_Os08g33810 lipoate protein ligase, putative, expressed gene lipoate protein ligase, putative, expressed chr8 21162293 21167046 - promoter 9 LOC_Os01g06130 expressed protein gene expressed protein chr1 2921643 2924024 + promoter 9 LOC_Os10g29420 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 15210475 15216045 + promoter,downstream 9 LOC_Os09g20810 strictosidine synthase, putative gene strictosidine synthase, putative chr9 12535620 12538846 + promoter 9 LOC_Os12g29510 hypothetical protein gene hypothetical protein chr12 17538119 17538634 + promoter 9 LOC_Os10g26100 hypothetical protein gene hypothetical protein chr10 13449694 13450050 + promoter 9 LOC_Os06g40818 aspartic proteinase, putative, expressed gene aspartic proteinase, putative, expressed chr6 24347626 24353102 + promoter 9 LOC_Os02g30680 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 18272865 18277102 - promoter 9 LOC_Os03g14170 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr3 7685642 7687780 - promoter 9 LOC_Os03g45650 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 25760211 25761511 - promoter 9 LOC_Os01g54570 DUF623 domain containing protein gene DUF623 domain containing protein chr1 31390217 31391191 + promoter 9 LOC_Os07g29590 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 17380245 17383567 - promoter,downstream 9 LOC_Os04g04254 sterol 3-beta-glucosyltransferase, putative, expressed gene sterol 3-beta-glucosyltransferase, putative, expressed chr4 1981230 1993544 - promoter 9 LOC_Os04g22340 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr4 12630356 12630904 + promoter 9 LOC_Os06g12000 hypothetical protein gene hypothetical protein chr6 6418603 6419379 - promoter 9 LOC_Os12g24400 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 13914749 13917908 + promoter 9 LOC_Os03g04070 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr3 1861348 1863241 - promoter 9 LOC_Os12g05040 heavy-metal-associated domain-containing protein, putative, expressed gene heavy-metal-associated domain-containing protein, putative, expressed chr12 2192731 2197849 + promoter 9 LOC_Os01g18960 hypothetical protein gene hypothetical protein chr1 10714732 10715456 + promoter 9 LOC_Os02g09300 hypothetical protein gene hypothetical protein chr2 4787844 4789274 - promoter 9 LOC_Os03g43890 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr3 24619371 24627583 - promoter 9 LOC_Os03g12970 hypothetical protein gene hypothetical protein chr3 7005938 7006171 + promoter,downstream 9 LOC_Os06g33400 hypothetical protein gene hypothetical protein chr6 19447322 19447750 + promoter 9 LOC_Os01g49960 hypothetical protein gene hypothetical protein chr1 28710567 28711305 - promoter 9 LOC_Os09g38940 hypothetical protein gene hypothetical protein chr9 22358487 22360363 - promoter 9 LOC_Os09g26930 hypothetical protein gene hypothetical protein chr9 16359213 16359760 + promoter 9 LOC_Os01g57540 protein kinase, putative, expressed gene protein kinase, putative, expressed chr1 33239442 33242574 + promoter 9 LOC_Os06g40784 expressed protein gene expressed protein chr6 24330145 24330632 + promoter,downstream 9 LOC_Os07g41970 hypothetical protein gene hypothetical protein chr7 25127904 25128716 - promoter,downstream 9 LOC_Os12g37669 hypothetical protein gene hypothetical protein chr12 23090713 23092094 + promoter 9 LOC_Os08g42370 zinc finger DHHC domain-containing protein, putative, expressed gene zinc finger DHHC domain-containing protein, putative, expressed chr8 26742080 26745771 - promoter 9 LOC_Os04g44440 TCP family transcription factor, putative, expressed gene TCP family transcription factor, putative, expressed chr4 26125476 26126546 + promoter 9 LOC_Os06g51370 OsSCP38 - Putative Serine Carboxypeptidase homologue gene OsSCP38 - Putative Serine Carboxypeptidase homologue chr6 31108239 31110390 + promoter 9 LOC_Os03g25390 novel plant SNARE 11, putative, expressed gene novel plant SNARE 11, putative, expressed chr3 14512384 14517236 - promoter 9 LOC_Os01g01530 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 275285 276881 - promoter 9 LOC_Os08g31300 hypothetical protein gene hypothetical protein chr8 19361929 19362233 - promoter 9 LOC_Os07g12350 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 6992860 6996500 + promoter 9 LOC_Os11g40120 hypothetical protein gene hypothetical protein chr11 23464895 23465656 - promoter 9 LOC_Os07g17970 AMP-binding domain containing protein, expressed gene AMP-binding domain containing protein, expressed chr7 10635451 10642146 + promoter 9 LOC_Os05g28330 hypothetical protein gene hypothetical protein chr5 16527018 16529749 + promoter,downstream 9 LOC_Os06g29580 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 16949362 16958200 - promoter 9 LOC_Os04g38740 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr4 22838914 22841536 + promoter 9 LOC_Os06g47450 hypothetical protein gene hypothetical protein chr6 28741346 28741710 - promoter 9 LOC_Os01g07150 expressed protein gene expressed protein chr1 3375593 3376205 + promoter 9 LOC_Os03g07490 hypothetical protein gene hypothetical protein chr3 3806589 3806795 + promoter,downstream 9 LOC_Os01g22270 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 12520006 12525769 + promoter 9 LOC_Os03g03180 uncharacterized Cys-rich domain containing protein, putative, expressed gene uncharacterized Cys-rich domain containing protein, putative, expressed chr3 1344956 1348519 - promoter 9 LOC_Os06g43020 expressed protein gene expressed protein chr6 25856439 25862971 - promoter 9 LOC_Os02g52810 remorin C-terminal domain containing protein, putative, expressed gene remorin C-terminal domain containing protein, putative, expressed chr2 32280720 32286221 - promoter 9 LOC_Os06g23684 tyrosine aminotransferase, putative, expressed gene tyrosine aminotransferase, putative, expressed chr6 13834594 13843082 + promoter 9 LOC_Os01g03280 hypothetical protein gene hypothetical protein chr1 1329804 1331398 - promoter 9 LOC_Os03g61450 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr3 34857143 34858171 + promoter 9 LOC_Os11g45864 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 27272104 27277805 - promoter 9 LOC_Os07g03508 phototropin, putative gene phototropin, putative chr7 1401500 1401946 - promoter 9 LOC_Os11g08235 hypothetical protein gene hypothetical protein chr11 4321043 4321486 + promoter,downstream 9 LOC_Os05g39750 conserved hypothetical protein gene conserved hypothetical protein chr5 23285997 23286287 + promoter 9 LOC_Os03g46480 ranBP1 domain containing protein, expressed gene ranBP1 domain containing protein, expressed chr3 26286248 26291580 - promoter,downstream 9 LOC_Os07g12430 hypothetical protein gene hypothetical protein chr7 7090853 7092513 - promoter 9 LOC_Os07g16270 hypothetical protein gene hypothetical protein chr7 9492583 9492966 - promoter 9 LOC_Os11g30720 conserved hypothetical protein gene conserved hypothetical protein chr11 17424408 17425657 + promoter 9 LOC_Os01g11770 hypothetical protein gene hypothetical protein chr1 6367038 6367517 - promoter 9 LOC_Os02g08060 hypothetical protein gene hypothetical protein chr2 4245116 4245478 - promoter 9 LOC_Os07g09310 thioredoxin, putative, expressed gene thioredoxin, putative, expressed chr7 4879569 4881734 - promoter 9 LOC_Os11g29710 OsFBO4 - F-box and other domain containing protein, expressed gene OsFBO4 - F-box and other domain containing protein, expressed chr11 16763789 16765769 + promoter 9 LOC_Os11g32590 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr11 18764245 18766029 + promoter 9 LOC_Os05g48530 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 27749590 27752571 - promoter 9 LOC_Os01g15570 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 8748105 8748344 + promoter 9 LOC_Os11g45590 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr11 27119365 27124615 + promoter 9 LOC_Os09g39520 Cupin domain containing protein gene Cupin domain containing protein chr9 22697264 22697908 - promoter 9 LOC_Os02g30974 expressed protein gene expressed protein chr2 18495334 18503763 - promoter 9 LOC_Os03g22020 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 12616706 12618336 - promoter 9 LOC_Os02g43690 ras-related protein, putative, expressed gene ras-related protein, putative, expressed chr2 26359955 26364731 + promoter 9 LOC_Os07g02730 hypothetical protein gene hypothetical protein chr7 992662 993051 - promoter 9 LOC_Os06g34000 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 19799870 19802294 - promoter 9 LOC_Os06g02019 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 579666 585451 + promoter 9 LOC_Os04g30250 wall-associated receptor kinase-like 5 precursor, putative, expressed gene wall-associated receptor kinase-like 5 precursor, putative, expressed chr4 17881157 17885651 - promoter 9 LOC_Os02g56620 hypothetical protein gene hypothetical protein chr2 34691165 34693845 + promoter,downstream 9 LOC_Os02g47070 hypothetical protein gene hypothetical protein chr2 28732333 28733209 - promoter,downstream 9 LOC_Os04g09880 hypothetical protein gene hypothetical protein chr4 5306875 5308247 + promoter 9 LOC_Os11g47940 hypothetical protein gene hypothetical protein chr11 28390690 28393888 + promoter,downstream 9 LOC_Os04g55750 OsWAK54 - OsWAK short gene gene OsWAK54 - OsWAK short gene chr4 33000701 33001777 + promoter 9 LOC_Os01g18920 hAT dimerisation domain-containing protein, putative gene hAT dimerisation domain-containing protein, putative chr1 10692303 10694890 - promoter 9 LOC_Os04g26560 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 15494695 15497850 + promoter 9 LOC_Os01g54280 conserved hypothetical protein gene conserved hypothetical protein chr1 31229043 31229399 - promoter 9 LOC_Os02g37070 expressed protein gene expressed protein chr2 22395465 22396224 + promoter 9 LOC_Os12g28159 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 16626013 16629066 + promoter 9 LOC_Os09g22470 hypothetical protein gene hypothetical protein chr9 13564643 13565788 + promoter 9 LOC_Os01g45250 DUF1645 domain containing protein, putative, expressed gene DUF1645 domain containing protein, putative, expressed chr1 25680526 25682032 + promoter 9 LOC_Os11g39990 patatin, putative, expressed gene patatin, putative, expressed chr11 23378486 23382437 + promoter 9 LOC_Os04g14260 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 7986015 7988572 - promoter 9 LOC_Os04g34760 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 20885965 20886684 - promoter 9 LOC_Os11g16810 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 9328977 9329871 - promoter 9 LOC_Os11g15390 hypothetical protein gene hypothetical protein chr11 8709523 8709744 + promoter 9 LOC_Os06g40790 MLO domain containing protein, putative gene MLO domain containing protein, putative chr6 24331456 24337115 - promoter 9 LOC_Os01g68830 expressed protein gene expressed protein chr1 39990923 39994070 + promoter 9 LOC_Os03g20300 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed gene glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed chr3 11467214 11474501 - promoter 9 LOC_Os04g46140 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr4 27151442 27152777 - promoter,downstream 9 LOC_Os11g31030 hypothetical protein gene hypothetical protein chr11 17586033 17586821 - promoter,downstream 9 LOC_Os01g54220 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 31186230 31193782 + promoter,downstream 9 LOC_Os06g10269 unknown gene unknown chr6 5270723 5271311 + promoter 9 LOC_Os01g32940 hypothetical protein gene hypothetical protein chr1 18078382 18079254 - promoter 9 LOC_Os01g45920 hypothetical protein gene hypothetical protein chr1 26088493 26089071 - promoter 9 LOC_Os08g24750 xyloglucan fucosyltransferase, putative, expressed gene xyloglucan fucosyltransferase, putative, expressed chr8 14973293 14975351 + promoter 9 LOC_Os05g46200 beta-galactosidase 8 precursor, putative, expressed gene beta-galactosidase 8 precursor, putative, expressed chr5 26731727 26738863 - promoter 9 LOC_Os03g64140 expressed protein gene expressed protein chr3 36235979 36238006 - promoter 9 LOC_Os09g13050 hypothetical protein gene hypothetical protein chr9 7524310 7524849 + promoter 9 LOC_Os02g39180 expressed protein gene expressed protein chr2 23658876 23661294 + promoter 9 LOC_Os10g33900 possible lysine decarboxylase domain containing protein, expressed gene possible lysine decarboxylase domain containing protein, expressed chr10 17929625 17934568 + promoter 9 LOC_Os11g38280 hypothetical protein gene hypothetical protein chr11 22199902 22200162 - promoter,downstream 9 LOC_Os06g46230 hypothetical protein gene hypothetical protein chr6 28002807 28003325 - promoter 9 LOC_Os07g25820 hypothetical protein gene hypothetical protein chr7 14826662 14827164 + promoter,downstream 9 LOC_Os12g43150 hypothetical protein gene hypothetical protein chr12 26760625 26764744 - promoter 9 LOC_Os08g01680 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr8 394228 399898 + promoter,downstream 9 LOC_Os05g03934 expressed protein gene expressed protein chr5 1761952 1762739 + promoter 9 LOC_Os01g01600 ethylene-responsive protein related, putative, expressed gene ethylene-responsive protein related, putative, expressed chr1 302103 305800 + promoter 9 LOC_Os09g29170 CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_CAMK_like.38 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr9 17733588 17737427 - promoter 9 LOC_Os10g32940 expressed protein gene expressed protein chr10 17172915 17173202 + promoter 9 LOC_Os01g38390 hypothetical protein gene hypothetical protein chr1 21556211 21556908 - promoter 9 LOC_Os12g34360 expressed protein gene expressed protein chr12 20795523 20798208 + promoter 9 LOC_Os08g27220 AP2 domain containing protein gene AP2 domain containing protein chr8 16617457 16618395 - promoter 9 LOC_Os09g27130 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 16496639 16497930 - promoter 9 LOC_Os09g11970 keratin, type II cytoskeletal 2 epidermal, putative gene keratin, type II cytoskeletal 2 epidermal, putative chr9 6744873 6745376 + promoter,downstream 9 LOC_Os04g29760 conserved hypothetical protein gene conserved hypothetical protein chr4 17562204 17562821 + promoter 9 LOC_Os11g33946 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 19366481 19368900 - promoter 9 LOC_Os12g29630 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 17665149 17668715 - promoter 9 LOC_Os03g06880 kinase, pfkB family, putative, expressed gene kinase, pfkB family, putative, expressed chr3 3478407 3481216 + promoter 9 LOC_Os05g50830 protein kinase family protein, putative, expressed gene protein kinase family protein, putative, expressed chr5 29091980 29094792 + promoter 9 LOC_Os03g21980 tRNA pseudouridine synthase family protein, putative, expressed gene tRNA pseudouridine synthase family protein, putative, expressed chr3 12590389 12594354 - promoter 9 LOC_Os03g42960 hypothetical protein gene hypothetical protein chr3 23955999 23959260 + promoter 9 LOC_Os10g02210 peptide transporter PTR2, putative gene peptide transporter PTR2, putative chr10 760157 764693 - promoter 9 LOC_Os01g11210 expressed protein gene expressed protein chr1 6002524 6003869 + promoter 9 LOC_Os01g07439 unknown gene unknown chr1 3528066 3528831 - promoter 9 LOC_Os02g26440 prefoldin subunit, putative, expressed gene prefoldin subunit, putative, expressed chr2 15518249 15522294 + promoter 9 LOC_Os01g19180 hypothetical protein gene hypothetical protein chr1 10835618 10837070 + promoter,downstream 9 LOC_Os04g42210 GPI-anchored protein, putative, expressed gene GPI-anchored protein, putative, expressed chr4 24788017 24788995 + promoter 9 LOC_Os07g04510 TCP family transcription factor, putative gene TCP family transcription factor, putative chr7 1988699 1989785 + promoter 9 LOC_Os02g37180 expressed protein gene expressed protein chr2 22468708 22469820 - promoter 9 LOC_Os09g37130 conserved hypothetical protein gene conserved hypothetical protein chr9 21417852 21418253 - promoter,downstream 9 LOC_Os01g10670 hypothetical protein gene hypothetical protein chr1 5694273 5694584 - promoter,downstream 9 LOC_Os12g04390 hypothetical protein gene hypothetical protein chr12 1863322 1864544 + promoter 9 LOC_Os09g35590 hypothetical protein gene hypothetical protein chr9 20456609 20457019 + promoter,downstream 9 LOC_Os06g05209 pectate lyase precursor, putative, expressed gene pectate lyase precursor, putative, expressed chr6 2335430 2337190 - promoter,downstream 9 LOC_Os04g54490 expressed protein gene expressed protein chr4 32229671 32230504 + promoter,downstream 9 LOC_Os09g11480 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr9 6403474 6405039 - promoter 9 LOC_Os08g36700 HSF-type DNA-binding domain containing protein, expressed gene HSF-type DNA-binding domain containing protein, expressed chr8 23155583 23156818 - promoter,downstream 9 LOC_Os02g32550 expressed protein gene expressed protein chr2 19265520 19267344 - promoter 9 LOC_Os04g49050 hypothetical protein gene hypothetical protein chr4 29057914 29058594 + promoter 9 LOC_Os05g11290 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 6371805 6373159 - promoter 9 LOC_Os10g07050 conserved hypothetical protein gene conserved hypothetical protein chr10 3700580 3702342 - promoter 9 LOC_Os10g05420 conserved hypothetical protein gene conserved hypothetical protein chr10 2673116 2674217 + promoter 9 LOC_Os05g14480 conserved hypothetical protein gene conserved hypothetical protein chr5 8176445 8178554 - promoter 9 LOC_Os04g33890 hypothetical protein gene hypothetical protein chr4 20358835 20359359 - promoter,downstream 9 LOC_Os08g03260 zinc finger family protein, putative gene zinc finger family protein, putative chr8 1509819 1511994 + promoter 9 LOC_Os02g55300 CAF1 family ribonuclease containing protein, putative, expressed gene CAF1 family ribonuclease containing protein, putative, expressed chr2 33848294 33851179 + promoter 9 LOC_Os11g10590 hypothetical protein gene hypothetical protein chr11 5804503 5804769 + promoter,downstream 9 LOC_Os06g09080 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 4567260 4568265 + promoter 9 LOC_Os07g19190 ribosomal protein L24, putative, expressed gene ribosomal protein L24, putative, expressed chr7 11358291 11361418 + promoter,downstream 9 LOC_Os11g43780 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 25973935 25975362 - promoter 9 LOC_Os03g22950 acyl carrier protein, putative, expressed gene acyl carrier protein, putative, expressed chr3 13256950 13259356 - promoter 9 LOC_Os05g49450 OsFBX177 - F-box domain containing protein, expressed gene OsFBX177 - F-box domain containing protein, expressed chr5 28286520 28287830 - promoter 9 LOC_Os07g01800 cysteine proteinase EP-B 1 precursor, putative gene cysteine proteinase EP-B 1 precursor, putative chr7 463358 464341 + promoter 9 LOC_Os01g13510 hypothetical protein gene hypothetical protein chr1 7542671 7543510 + promoter 9 LOC_Os05g09708 hypothetical protein gene hypothetical protein chr5 5481186 5482731 + promoter 9 LOC_Os04g39190 cell division protease ftsH homolog 4, putative, expressed gene cell division protease ftsH homolog 4, putative, expressed chr4 23120546 23126202 - promoter 9 LOC_Os01g02880 fructose-bisphospate aldolase isozyme, putative, expressed gene fructose-bisphospate aldolase isozyme, putative, expressed chr1 1015065 1018545 + promoter 9 LOC_Os11g03160 glycosyl transferase, family 8, putative, expressed gene glycosyl transferase, family 8, putative, expressed chr11 1135057 1140412 - promoter 9 LOC_Os10g31760 hypothetical protein gene hypothetical protein chr10 16577589 16578756 - promoter 9 LOC_Os05g42440 conserved hypothetical protein gene conserved hypothetical protein chr5 24850713 24851734 + promoter 9 LOC_Os09g27320 ZOS9-13 - C2H2 zinc finger protein, expressed gene ZOS9-13 - C2H2 zinc finger protein, expressed chr9 16609065 16610587 + promoter 9 LOC_Os09g08560 hypothetical protein gene hypothetical protein chr9 4465499 4465945 + promoter,downstream 9 LOC_Os08g38520 OsFBX302 - F-box domain containing protein gene OsFBX302 - F-box domain containing protein chr8 24363258 24364103 + promoter 9 LOC_Os06g46050 hypothetical protein gene hypothetical protein chr6 27914460 27915050 - promoter 9 LOC_Os06g47420 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr6 28725647 28727266 - promoter 9 LOC_Os06g47250 DUF292 domain containing protein, expressed gene DUF292 domain containing protein, expressed chr6 28643142 28647822 - promoter 9 LOC_Os03g04850 hypothetical protein gene hypothetical protein chr3 2312479 2313597 + promoter 9 LOC_Os06g43370 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr6 26071381 26073149 + promoter 9 LOC_Os01g63520 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 36818269 36821573 + promoter 9 LOC_Os04g55640 plant-specific domain TIGR01627 family protein, expressed gene plant-specific domain TIGR01627 family protein, expressed chr4 32933175 32934593 + promoter 9 LOC_Os11g31460 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 17914035 17915224 - promoter,downstream 9 LOC_Os11g04370 ribosomal protein L24, putative, expressed gene ribosomal protein L24, putative, expressed chr11 1812629 1815762 - promoter 9 LOC_Os08g33530 TCP family transcription factor, putative gene TCP family transcription factor, putative chr8 20928585 20929376 + promoter 9 LOC_Os03g19129 unknown gene unknown chr3 10714488 10714622 + promoter,downstream 9 LOC_Os10g22840 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 11797554 11798872 - promoter 9 LOC_Os09g24880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 14859622 14860185 + promoter 9 LOC_Os04g53612 APO, putative, expressed gene APO, putative, expressed chr4 31774421 31776771 - promoter 9 LOC_Os10g10640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr10 5892611 5897596 + promoter 9 LOC_Os04g50040 hypothetical protein gene hypothetical protein chr4 29664711 29665761 - promoter 9 LOC_Os09g04790 PAP fibrillin family domain containing protein, expressed gene PAP fibrillin family domain containing protein, expressed chr9 2547874 2551855 + promoter 9 LOC_Os12g25860 O-methyltransferase, putative gene O-methyltransferase, putative chr12 15003639 15004352 + promoter 9 LOC_Os02g14710 expressed protein gene expressed protein chr2 8111705 8113442 + promoter 9 LOC_Os03g10280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 5241423 5244746 - promoter 9 LOC_Os01g11140 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 5960694 5964740 + promoter,downstream 9 LOC_Os03g12739 unknown gene unknown chr3 6813830 6814420 + promoter 9 LOC_Os11g09810 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr11 5240800 5246743 + promoter 9 LOC_Os03g40770 expressed protein gene expressed protein chr3 22665211 22667526 + promoter 9 LOC_Os04g02660 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 999540 1001357 - promoter 9 LOC_Os10g36839 unknown gene unknown chr10 19651211 19651456 + promoter 9 LOC_Os02g44770 uncharacterized mscS family protein, putative, expressed gene uncharacterized mscS family protein, putative, expressed chr2 27112122 27116571 + promoter 9 LOC_Os09g36950 hypothetical protein gene hypothetical protein chr9 21315300 21315704 + promoter,downstream 9 LOC_Os03g04320 hypothetical protein gene hypothetical protein chr3 1989592 1995015 - promoter 9 LOC_Os05g33850 UBA/TS-N domain containing protein, expressed gene UBA/TS-N domain containing protein, expressed chr5 19906349 19911025 - promoter 9 LOC_Os05g35700 hypothetical protein gene hypothetical protein chr5 21137277 21137851 - promoter 9 LOC_Os04g39600 fasciclin domain containing protein, expressed gene fasciclin domain containing protein, expressed chr4 23414397 23415562 - promoter,downstream 9 LOC_Os02g16740 hypothetical protein gene hypothetical protein chr2 9555585 9555815 + promoter 9 LOC_Os03g39620 hypothetical protein gene hypothetical protein chr3 22006858 22007727 + promoter,downstream 9 LOC_Os10g14011 expressed protein gene expressed protein chr10 7631562 7632513 + promoter 9 LOC_Os09g26020 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 15639151 15642456 + promoter 9 LOC_Os02g57560 tyrosine protein kinase domain containing protein, putative, expressed gene tyrosine protein kinase domain containing protein, putative, expressed chr2 35257297 35259524 - promoter 9 LOC_Os06g40900 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 24385490 24387005 + promoter 9 LOC_Os04g26970 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 15777375 15778145 - promoter 9 LOC_Os11g13540 serpin domain containing protein, putative, expressed gene serpin domain containing protein, putative, expressed chr11 7423829 7425356 - promoter 9 LOC_Os12g43330 hypothetical protein gene hypothetical protein chr12 26853476 26853817 + promoter,downstream 9 LOC_Os08g28610 hypothetical protein gene hypothetical protein chr8 17476700 17479776 - promoter 9 LOC_Os12g34660 hypothetical protein gene hypothetical protein chr12 21010955 21011527 + promoter 9 LOC_Os09g23770 expressed protein gene expressed protein chr9 14147019 14148492 - promoter 9 LOC_Os05g32400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 18840903 18847548 + promoter 9 LOC_Os04g47600 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 28059900 28064122 - promoter 9 LOC_Os05g44210 trehalose-6-phosphate synthase, putative, expressed gene trehalose-6-phosphate synthase, putative, expressed chr5 25651141 25659510 + promoter 9 LOC_Os06g14830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 8430065 8431051 + promoter 9 LOC_Os07g43300 hypothetical protein gene hypothetical protein chr7 25926096 25927754 + promoter 9 LOC_Os04g57090 jasmonate O-methyltransferase, putative, expressed gene jasmonate O-methyltransferase, putative, expressed chr4 33837523 33838970 + promoter 9 LOC_Os03g42860 pentatricopeptide, putative gene pentatricopeptide, putative chr3 23898322 23898714 - promoter,downstream 9 LOC_Os06g11720 cytokinin-O-glucosyltransferase 2, putative, expressed gene cytokinin-O-glucosyltransferase 2, putative, expressed chr6 6204608 6206654 + promoter 9 LOC_Os07g09570 hypothetical protein gene hypothetical protein chr7 5063932 5064449 - promoter 9 LOC_Os02g33560 expressed protein gene expressed protein chr2 19956729 19962055 - promoter 9 LOC_Os01g65860 ANTH domain containing protein, expressed gene ANTH domain containing protein, expressed chr1 38237432 38239262 - promoter 9 LOC_Os01g68545 expressed protein gene expressed protein chr1 39823824 39825665 - promoter 9 LOC_Os03g38480 conserved hypothetical protein gene conserved hypothetical protein chr3 21356524 21360588 + promoter 9 LOC_Os09g18450 flavonol synthase/flavanone 3-hydroxylase, putative, expressed gene flavonol synthase/flavanone 3-hydroxylase, putative, expressed chr9 11308062 11309775 + promoter 9 LOC_Os11g13570 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr11 7433380 7434901 - promoter 9 LOC_Os01g73030 conserved hypothetical protein gene conserved hypothetical protein chr1 42371367 42371952 - promoter 9 LOC_Os09g20730 peptidase aspartic family protein, putative gene peptidase aspartic family protein, putative chr9 12484713 12486169 + promoter 9 LOC_Os12g30750 hypothetical protein gene hypothetical protein chr12 18436194 18436550 - promoter 9 LOC_Os05g40080 OsWRKY54 - Superfamily of TFs having WRKY and zinc finger domains gene OsWRKY54 - Superfamily of TFs having WRKY and zinc finger domains chr5 23488032 23489137 - promoter 9 LOC_Os08g37070 hypothetical protein gene hypothetical protein chr8 23422823 23423143 + promoter,downstream 9 LOC_Os07g04280 expressed protein gene expressed protein chr7 1891994 1893085 - promoter 9 LOC_Os05g36910 NC domain-containing protein, putative, expressed gene NC domain-containing protein, putative, expressed chr5 21494802 21497481 - promoter 9 LOC_Os03g17980 CAMK_KIN1/SNF1/Nim1_like_AMPKh.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_KIN1/SNF1/Nim1_like_AMPKh.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr3 10005323 10010960 + promoter 9 LOC_Os04g56780 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr4 33675265 33676315 - promoter 9 LOC_Os05g13530 hypothetical protein gene hypothetical protein chr5 7499227 7499782 + promoter 9 LOC_Os03g10040 OsFBX77 - F-box domain containing protein, expressed gene OsFBX77 - F-box domain containing protein, expressed chr3 5047988 5048975 - promoter,downstream 9 LOC_Os11g11630 hypothetical protein gene hypothetical protein chr11 6467297 6468051 - promoter,downstream 9 LOC_Os05g27650 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 16035850 16045851 - promoter 9 LOC_Os03g58150 transmembrane BAX inhibitor motif-containing protein, putative, expressed gene transmembrane BAX inhibitor motif-containing protein, putative, expressed chr3 33095892 33098313 - promoter 9 LOC_Os01g13320 pectinesterase, putative, expressed gene pectinesterase, putative, expressed chr1 7428384 7430486 + promoter 9 LOC_Os02g56940 expressed protein gene expressed protein chr2 34895759 34898034 + promoter 9 LOC_Os06g34330 expressed protein gene expressed protein chr6 19972236 19972514 - promoter 9 LOC_Os02g47980 DUF617 domain containing protein, expressed gene DUF617 domain containing protein, expressed chr2 29358218 29359641 + promoter 9 LOC_Os02g48530 hypothetical protein gene hypothetical protein chr2 29702623 29703243 - promoter,downstream 9 LOC_Os02g53960 CXE carboxylesterase, putative gene CXE carboxylesterase, putative chr2 33031809 33032894 - promoter 9 LOC_Os04g33580 insoluble protein, putative gene insoluble protein, putative chr4 20155441 20156448 + promoter 9 LOC_Os07g02430 expressed protein gene expressed protein chr7 833299 834728 - promoter 9 LOC_Os03g07500 hypothetical protein gene hypothetical protein chr3 3809379 3809774 - promoter 9 LOC_Os01g56120 RNA recognition motif containing protein, putative gene RNA recognition motif containing protein, putative chr1 32307763 32312150 + promoter,downstream 9 LOC_Os07g04950 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 2180829 2181645 + promoter,downstream 9 LOC_Os11g08260 DEFL31 - Defensin and Defensin-like DEFL family gene DEFL31 - Defensin and Defensin-like DEFL family chr11 4325966 4326316 + promoter,downstream 9 LOC_Os07g13910 hypothetical protein gene hypothetical protein chr7 7951951 7953317 + promoter 9 LOC_Os01g18160 conserved hypothetical protein gene conserved hypothetical protein chr1 10165237 10165602 + promoter,downstream 9 LOC_Os03g44860 hypothetical protein gene hypothetical protein chr3 25308791 25309162 + promoter 9 LOC_Os04g58130 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed gene katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed chr4 34428554 34438007 - promoter 9 LOC_Os11g18870 osFTL11 FT-Like11 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein gene osFTL11 FT-Like11 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein chr11 10727467 10729343 + promoter 9 LOC_Os01g07860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 3782691 3785243 - promoter 9 LOC_Os09g21560 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 13040006 13043703 - promoter 9 LOC_Os03g04720 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 2252685 2254415 + promoter 9 LOC_Os04g32250 conserved hypothetical protein gene conserved hypothetical protein chr4 19151519 19155189 + promoter,downstream 9 LOC_Os01g33930 expressed protein gene expressed protein chr1 18658048 18664423 + promoter 9 LOC_Os01g33659 unknown gene unknown chr1 18525654 18526962 + promoter 9 LOC_Os08g41940 OsSPL16 - SBP-box gene family member, expressed gene OsSPL16 - SBP-box gene family member, expressed chr8 26498453 26503504 + promoter,downstream 9 LOC_Os12g40580 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 25080253 25080552 + promoter,downstream 9 LOC_Os02g10010 expressed protein gene expressed protein chr2 5207165 5208683 + promoter 9 LOC_Os08g03830 hypothetical protein gene hypothetical protein chr8 1831742 1832119 + promoter 9 LOC_Os08g09030 hypothetical protein gene hypothetical protein chr8 5248993 5249574 + promoter 9 LOC_Os10g26480 hypothetical protein gene hypothetical protein chr10 13714622 13715299 + promoter 9 LOC_Os12g43810 expressed protein gene expressed protein chr12 27171897 27172601 - promoter,downstream 9 LOC_Os05g51690 CCT motif family protein, expressed gene CCT motif family protein, expressed chr5 29593904 29597675 + promoter 9 LOC_Os04g47450 expressed protein gene expressed protein chr4 27970934 27971989 + promoter 9 LOC_Os05g46950 expressed protein gene expressed protein chr5 27100629 27104191 - promoter 9 LOC_Os09g37640 purine permease, putative gene purine permease, putative chr9 21696607 21697647 + promoter 9 LOC_Os02g50150 caleosin related protein, putative gene caleosin related protein, putative chr2 30630253 30632610 + promoter 9 LOC_Os04g43164 expressed protein gene expressed protein chr4 25366019 25368660 - promoter 9 LOC_Os03g22180 60S ribosomal protein L18-3, putative, expressed gene 60S ribosomal protein L18-3, putative, expressed chr3 12714589 12717094 - promoter 9 LOC_Os09g35550 hypothetical protein gene hypothetical protein chr9 20429967 20431440 + promoter 9 LOC_Os11g34050 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr11 19438013 19441270 + promoter 9 LOC_Os02g49140 glycosyltransferase, putative, expressed gene glycosyltransferase, putative, expressed chr2 30045728 30047497 + promoter 9 LOC_Os04g07870 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 4188724 4190398 + promoter 9 LOC_Os02g01070 FG-GAP repeat-containing protein, putative, expressed gene FG-GAP repeat-containing protein, putative, expressed chr2 34262 41100 + promoter 9 LOC_Os01g53750 glucan endo-1,3-beta-glucosidase precursor, putative, expressed gene glucan endo-1,3-beta-glucosidase precursor, putative, expressed chr1 30896929 30899576 + promoter 9 LOC_Os03g47430 hypothetical protein gene hypothetical protein chr3 26805410 26805772 - promoter 9 LOC_Os07g02300 tetratricopeptide repeat domain containing protein, expressed gene tetratricopeptide repeat domain containing protein, expressed chr7 752654 762372 - promoter 9 LOC_Os05g45490 hydrolase, acting on carbon-nitrogen, putative, expressed gene hydrolase, acting on carbon-nitrogen, putative, expressed chr5 26317180 26321733 + promoter 9 LOC_Os03g49350 lipozygenase protein, putative, expressed gene lipozygenase protein, putative, expressed chr3 28084665 28087667 + promoter 9 LOC_Os04g34550 hypothetical protein gene hypothetical protein chr4 20737868 20740921 + promoter 9 LOC_Os12g08890 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 4615221 4616294 - promoter,downstream 9 LOC_Os04g56790 TLD family protein, putative, expressed gene TLD family protein, putative, expressed chr4 33683962 33687792 - promoter 9 LOC_Os10g06510 cyclin-dependent kinase G-1, putative, expressed gene cyclin-dependent kinase G-1, putative, expressed chr10 3340652 3341911 + promoter 9 LOC_Os01g60880 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 35207927 35214235 + promoter 9 LOC_Os01g44380 hypothetical protein gene hypothetical protein chr1 25458180 25458500 - promoter 9 LOC_Os01g42120 expressed protein gene expressed protein chr1 23880856 23883162 + promoter 9 LOC_Os07g39330 hypothetical protein gene hypothetical protein chr7 23561178 23561481 + promoter 9 LOC_Os07g27520 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 16082138 16088345 + promoter 9 LOC_Os05g03984 unknown gene unknown chr5 1793474 1794500 - promoter,downstream 9 LOC_Os02g04945 phosphatidate cytidylyltransferase family protein, putative, expressed gene phosphatidate cytidylyltransferase family protein, putative, expressed chr2 2312148 2317214 - promoter 9 LOC_Os04g55170 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor gene LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor chr4 32612666 32612935 - promoter 9 LOC_Os07g27590 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 16110835 16111855 + promoter 9 LOC_Os11g32540 chalcone synthase, putative gene chalcone synthase, putative chr11 18741385 18742125 - promoter,downstream 9 LOC_Os07g05330 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 2428913 2433684 - promoter,downstream 9 LOC_Os02g45760 chitin-inducible gibberellin-responsive protein 2, putative, expressed gene chitin-inducible gibberellin-responsive protein 2, putative, expressed chr2 27847984 27850294 - promoter 9 LOC_Os12g12950 expressed protein gene expressed protein chr12 7169200 7173968 - promoter,downstream 9 LOC_Os07g06790 VQ domain containing protein, putative, expressed gene VQ domain containing protein, putative, expressed chr7 3312465 3312998 + promoter,downstream 9 LOC_Os01g49370 expressed protein gene expressed protein chr1 28379858 28380838 - promoter 9 LOC_Os11g13820 protein phosphatase 2C, putative, expressed gene protein phosphatase 2C, putative, expressed chr11 7610208 7614480 + promoter 9 LOC_Os12g27025 hypothetical protein gene hypothetical protein chr12 15825848 15826129 + promoter 9 LOC_Os07g11450 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 6299547 6301173 - promoter 9 LOC_Os01g28720 hypothetical protein gene hypothetical protein chr1 16079594 16080782 + promoter,downstream 9 LOC_Os05g42190 NADPH-dependent FMN reductase domain containing protein, expressed gene NADPH-dependent FMN reductase domain containing protein, expressed chr5 24607072 24610555 - promoter 9 LOC_Os04g50830 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr4 29881165 29884734 - promoter 9 LOC_Os01g60750 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 35130500 35134617 - promoter 9 LOC_Os02g48590 expressed protein gene expressed protein chr2 29739677 29741545 + promoter 9 LOC_Os06g38580 hypothetical protein gene hypothetical protein chr6 22855418 22855618 - promoter,downstream 9 LOC_Os07g34080 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 20371788 20375093 + promoter 9 LOC_Os05g51380 expressed protein gene expressed protein chr5 29396937 29402199 + promoter 9 LOC_Os03g53450 hypothetical protein gene hypothetical protein chr3 30654721 30655948 + promoter 9 LOC_Os02g17590 hypothetical protein gene hypothetical protein chr2 10121710 10122009 + promoter,downstream 9 LOC_Os02g14440 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr2 7948542 7950059 + promoter 9 LOC_Os09g29490 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr9 17931643 17934813 - promoter 9 LOC_Os06g42140 bZIP transcription factor, putative gene bZIP transcription factor, putative chr6 25303129 25303344 - promoter 9 LOC_Os06g23070 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 13447494 13452398 + promoter 9 LOC_Os08g36690 hypothetical protein gene hypothetical protein chr8 23153844 23154143 - promoter,downstream 9 LOC_Os01g07490 RST1, putative, expressed gene RST1, putative, expressed chr1 3558732 3573280 - promoter 9 LOC_Os10g21700 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 11053214 11057473 + promoter 9 LOC_Os11g33440 expressed protein gene expressed protein chr11 19322714 19324878 + promoter 9 LOC_Os01g01440 conserved hypothetical protein gene conserved hypothetical protein chr1 218011 219776 - promoter 9 LOC_Os02g01380 expressed protein gene expressed protein chr2 219577 221707 - promoter 9 LOC_Os01g67720 ABC1 family domain containing protein, putative, expressed gene ABC1 family domain containing protein, putative, expressed chr1 39356412 39361841 - promoter 9 LOC_Os12g40900 OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed gene OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed chr12 25291947 25293965 + promoter 9 LOC_Os09g28930 DNA binding protein, putative gene DNA binding protein, putative chr9 17587283 17588287 - promoter 9 LOC_Os05g49800 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed gene ketol-acid reductoisomerase, chloroplast precursor, putative, expressed chr5 28516549 28519970 - promoter 9 LOC_Os09g13300 hypothetical protein gene hypothetical protein chr9 7669703 7672379 - promoter 9 LOC_Os03g47470 STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast gene STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast chr3 26823556 26825160 + promoter,downstream 9 LOC_Os01g23760 OsMADS93 - MADS-box family gene with M-beta type-box gene OsMADS93 - MADS-box family gene with M-beta type-box chr1 13362681 13363904 + promoter 9 LOC_Os06g38115 expressed protein gene expressed protein chr6 22559981 22560400 + promoter 9 LOC_Os04g49670 DUF581 domain containing protein gene DUF581 domain containing protein chr4 29434228 29436367 - promoter 9 LOC_Os08g31290 hypothetical protein gene hypothetical protein chr8 19357369 19357656 - promoter 9 LOC_Os04g28805 hypothetical protein gene hypothetical protein chr4 16884609 16884890 + promoter,downstream 9 LOC_Os10g02610 hypothetical protein gene hypothetical protein chr10 997141 998427 + promoter 9 LOC_Os12g41470 hypothetical protein gene hypothetical protein chr12 25658742 25659274 + promoter 9 LOC_Os02g44124 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 26677180 26681796 + promoter 9 LOC_Os09g35850 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr9 20629236 20633047 + promoter 9 LOC_Os07g40340 hypothetical protein gene hypothetical protein chr7 24193629 24193997 - promoter 9 LOC_Os09g20600 hypothetical protein gene hypothetical protein chr9 12415811 12416083 + promoter 9 LOC_Os02g56320 glycogen synthase 1, putative, expressed gene glycogen synthase 1, putative, expressed chr2 34470061 34477935 + promoter 9 LOC_Os08g01380 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed gene 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed chr8 240679 241634 - promoter 9 LOC_Os02g25150 conserved hypothetical protein gene conserved hypothetical protein chr2 14606239 14606766 + promoter,downstream 9 LOC_Os09g14250 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr9 8424819 8427327 - promoter 9 LOC_Os03g40400 interferon-induced, double-stranded RNA-activated protein kinase, putative gene interferon-induced, double-stranded RNA-activated protein kinase, putative chr3 22444319 22446222 + promoter 9 LOC_Os04g27410 MYB family transcription factor, putative gene MYB family transcription factor, putative chr4 16027300 16029903 - promoter 9 LOC_Os12g02340 LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL14 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr12 759919 761534 + promoter 9 LOC_Os02g06170 expressed protein gene expressed protein chr2 3080516 3082867 + promoter 9 LOC_Os12g44280 subtilase, putative gene subtilase, putative chr12 27413047 27413997 - promoter 9 LOC_Os07g37220 inositol-1-monophosphatase, putative, expressed gene inositol-1-monophosphatase, putative, expressed chr7 22302867 22307683 - promoter 9 LOC_Os05g48610 expressed protein gene expressed protein chr5 27805075 27805680 + promoter 9 LOC_Os04g35580 expressed protein gene expressed protein chr4 21520808 21521945 + promoter 9 LOC_Os11g02774 histidine triad family protein, putative gene histidine triad family protein, putative chr11 911480 912992 + promoter 9 LOC_Os12g43830 NUC189 domain containing protein, expressed gene NUC189 domain containing protein, expressed chr12 27176739 27179569 - promoter 9 LOC_Os04g07140 hypothetical protein gene hypothetical protein chr4 3782982 3784052 - promoter 9 LOC_Os08g13770 hypothetical protein gene hypothetical protein chr8 8208311 8208975 - promoter 9 LOC_Os02g27910 conserved hypothetical protein gene conserved hypothetical protein chr2 16511719 16512318 + promoter 9 LOC_Os09g17480 conserved hypothetical protein gene conserved hypothetical protein chr9 10691695 10694418 + promoter 9 LOC_Os03g45860 OsSAUR17 - Auxin-responsive SAUR gene family member gene OsSAUR17 - Auxin-responsive SAUR gene family member chr3 25896724 25897044 + promoter,downstream 9 LOC_Os08g09790 conserved hypothetical protein gene conserved hypothetical protein chr8 5657730 5661662 + promoter 9 LOC_Os04g33030 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr4 19822453 19824317 + promoter 9 LOC_Os07g03328 phototropin, putative gene phototropin, putative chr7 1335197 1335643 - promoter 9 LOC_Os06g22390 expressed protein gene expressed protein chr6 13002029 13002794 + promoter 9 LOC_Os07g36990 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 22160138 22165672 + promoter 9 LOC_Os02g30460 uncharacterized protein MJ0304, putative, expressed gene uncharacterized protein MJ0304, putative, expressed chr2 18133195 18136884 - promoter 9 LOC_Os10g37450 hypothetical protein gene hypothetical protein chr10 19973427 19974728 - promoter 9 LOC_Os03g22200 nodulin MtN3 family protein, putative, expressed gene nodulin MtN3 family protein, putative, expressed chr3 12727966 12730188 + promoter 9 LOC_Os11g43790 DUF581 domain containing protein, expressed gene DUF581 domain containing protein, expressed chr11 25981449 25982294 + promoter 9 LOC_Os02g37010 flavin-containing monooxygenase family protein, putative, expressed gene flavin-containing monooxygenase family protein, putative, expressed chr2 22344199 22346140 + promoter 9 LOC_Os10g22790 hypothetical protein gene hypothetical protein chr10 11774214 11774607 + promoter 9 LOC_Os07g04390 hypothetical protein gene hypothetical protein chr7 1945346 1950815 + promoter 9 LOC_Os07g05199 unknown gene unknown chr7 2330553 2331086 + promoter 9 LOC_Os04g54100 exostosin family protein, putative gene exostosin family protein, putative chr4 32050206 32050592 - promoter,downstream 9 LOC_Os01g33630 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 18505474 18510307 - promoter 9 LOC_Os09g36180 glycosyl transferase family 8 protein gene glycosyl transferase family 8 protein chr9 20851801 20860490 - promoter 9 LOC_Os10g29820 snRNP protein, putative gene snRNP protein, putative chr10 15429021 15429965 - promoter 9 LOC_Os06g35890 hypothetical protein gene hypothetical protein chr6 20938338 20938692 - promoter 9 LOC_Os03g27550 OsSCP17 - Putative Serine Carboxypeptidase homologue gene OsSCP17 - Putative Serine Carboxypeptidase homologue chr3 15799933 15800558 - promoter,downstream 9 LOC_Os07g13100 DNA binding protein, putative gene DNA binding protein, putative chr7 7500895 7502894 - promoter 9 LOC_Os09g32220 pob, putative, expressed gene pob, putative, expressed chr9 19234783 19238306 + promoter 9 LOC_Os03g18040 hypothetical protein gene hypothetical protein chr3 10043641 10044732 + promoter 9 LOC_Os01g71390 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 41366701 41367981 + promoter,downstream 9 LOC_Os01g38000 conserved hypothetical protein gene conserved hypothetical protein chr1 21285037 21285576 - promoter,downstream 9 LOC_Os05g03010 hypothetical protein gene hypothetical protein chr5 1137950 1139955 - promoter 9 LOC_Os03g12800 hypothetical protein gene hypothetical protein chr3 6856877 6857361 - promoter 9 LOC_Os07g29750 glycosyl hydrolases family 16, putative, expressed gene glycosyl hydrolases family 16, putative, expressed chr7 17489706 17492033 + promoter 9 LOC_Os07g15240 hypothetical protein gene hypothetical protein chr7 8786299 8786756 - promoter 9 LOC_Os07g44460 peroxidase precursor, putative gene peroxidase precursor, putative chr7 26556318 26557340 - promoter,downstream 9 LOC_Os01g07160 OsFBX3 - F-box domain containing protein gene OsFBX3 - F-box domain containing protein chr1 3379727 3381058 - promoter 9 LOC_Os08g36250 expressed protein gene expressed protein chr8 22846663 22848514 - promoter 9 LOC_Os10g26890 hypothetical protein gene hypothetical protein chr10 14070449 14071415 - promoter 9 LOC_Os07g04260 hypothetical protein gene hypothetical protein chr7 1877915 1879941 + promoter 9 LOC_Os01g40390 phosphatase-associated family protein, putative gene phosphatase-associated family protein, putative chr1 22802642 22807160 - promoter,downstream 9 LOC_Os03g55360 heat shock protein DnaJ, putative, expressed gene heat shock protein DnaJ, putative, expressed chr3 31488806 31493491 + promoter 9 LOC_Os01g74120 hypothetical protein gene hypothetical protein chr1 42917158 42917478 + promoter,downstream 9 LOC_Os07g44440 peroxiredoxin, putative, expressed gene peroxiredoxin, putative, expressed chr7 26550787 26551666 + promoter,downstream 9 LOC_Os08g44280 protein-L-isoaspartate O-methyltransferase, putative, expressed gene protein-L-isoaspartate O-methyltransferase, putative, expressed chr8 27874629 27877968 + promoter 9 LOC_Os08g31620 hypothetical protein gene hypothetical protein chr8 19572182 19573387 + promoter,downstream 9 LOC_Os01g47380 hypothetical protein gene hypothetical protein chr1 27066564 27067972 + promoter 9 LOC_Os08g34490 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 21635300 21639011 + promoter 9 LOC_Os05g25500 hypothetical protein gene hypothetical protein chr5 14767851 14768381 + promoter,downstream 9 LOC_Os01g66500 phosphoribosylformylglycinamidine synthase, putative, expressed gene phosphoribosylformylglycinamidine synthase, putative, expressed chr1 38617693 38622793 - promoter,downstream 9 LOC_Os07g03610 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1448229 1448741 + promoter,downstream 9 LOC_Os04g34820 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 20935315 20936827 - promoter 9 LOC_Os02g48330 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed gene 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed chr2 29581069 29586122 - promoter 9 LOC_Os09g12690 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr9 7264424 7266380 + promoter 9 LOC_Os01g07060 POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative gene POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative chr1 3319451 3320035 - promoter 9 LOC_Os04g54920 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 32482771 32483915 - promoter 9 LOC_Os07g05890 hypothetical protein gene hypothetical protein chr7 2828668 2829018 + promoter 9 LOC_Os03g50980 ATSIZ1/SIZ1, putative, expressed gene ATSIZ1/SIZ1, putative, expressed chr3 29119839 29128018 + promoter 9 LOC_Os04g38730 hypothetical protein gene hypothetical protein chr4 22816387 22818434 - promoter 9 LOC_Os01g38880 hypothetical protein gene hypothetical protein chr1 21813751 21816236 + promoter 9 LOC_Os01g74600 vegetative storage protein, putative, expressed gene vegetative storage protein, putative, expressed chr1 43195076 43197624 + promoter 9 LOC_Os08g04640 expressed protein gene expressed protein chr8 2319440 2319997 - promoter 9 LOC_Os07g46520 rhythmically expressed gene 2 protein, putative, expressed gene rhythmically expressed gene 2 protein, putative, expressed chr7 27782655 27785927 - promoter 9 LOC_Os05g40120 hypothetical protein gene hypothetical protein chr5 23508593 23509602 - promoter 9 LOC_Os10g14030 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 7641805 7644819 - promoter 9 LOC_Os09g03680 ankyrin, putative, expressed gene ankyrin, putative, expressed chr9 1849573 1858251 - promoter 9 LOC_Os01g01780 exostosin family protein, putative, expressed gene exostosin family protein, putative, expressed chr1 411579 414830 + promoter 9 LOC_Os01g66670 hypothetical protein gene hypothetical protein chr1 38722304 38723122 - promoter 9 LOC_Os07g44940 ATP12 ATPase, putative, expressed gene ATP12 ATPase, putative, expressed chr7 26805428 26808069 - promoter 9 LOC_Os06g48290 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr6 29197272 29198358 - promoter,downstream 9 LOC_Os03g59010 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr3 33584065 33584947 + promoter 9 LOC_Os07g13950 conserved hypothetical protein gene conserved hypothetical protein chr7 7972482 7974779 - promoter 9 LOC_Os07g04300 hypothetical protein gene hypothetical protein chr7 1896616 1896957 + promoter,downstream 9 LOC_Os12g43610 hypothetical protein gene hypothetical protein chr12 27038326 27038715 + promoter 9 LOC_Os11g09089 unknown gene unknown chr11 4823274 4823704 + promoter,downstream 9 LOC_Os03g26200 methyltransferase, putative, expressed gene methyltransferase, putative, expressed chr3 14991464 14996060 + promoter 9 LOC_Os07g35790 TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-ld.5 - DUF26 kinases have homology to DUF26 containing loci, expressed chr7 21433564 21436678 - promoter 9 LOC_Os12g40000 hypothetical protein gene hypothetical protein chr12 24694200 24696598 - promoter 9 LOC_Os11g43770 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr11 25971413 25972888 + promoter,downstream 9 LOC_Os06g17710 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 10282766 10283197 - promoter 9 LOC_Os04g55260 thiamine-repressible mitochondrial transport protein THI74, putative, expressed gene thiamine-repressible mitochondrial transport protein THI74, putative, expressed chr4 32670537 32675530 - promoter 9 LOC_Os02g03880 hypothetical protein gene hypothetical protein chr2 1650815 1651072 + promoter 9 LOC_Os12g27030 conserved hypothetical protein gene conserved hypothetical protein chr12 15826894 15827247 - promoter 9 LOC_Os06g20240 latency associated nuclear antigen, putative gene latency associated nuclear antigen, putative chr6 11617544 11618253 - promoter 9 LOC_Os04g38370 wound/stress protein, putative gene wound/stress protein, putative chr4 22637151 22637809 + promoter 9 LOC_Os02g37620 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 22696487 22699485 - promoter 9 LOC_Os06g35990 hypothetical protein gene hypothetical protein chr6 21020840 21022689 - promoter,downstream 9 LOC_Os12g39400 ZOS12-09 - C2H2 zinc finger protein, expressed gene ZOS12-09 - C2H2 zinc finger protein, expressed chr12 24203617 24205234 - promoter 9 LOC_Os07g14320 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 8171835 8173913 + promoter 9 LOC_Os04g36040 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr4 21798837 21803970 - promoter 9 LOC_Os05g03260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 1317206 1317823 - downstream 9 LOC_Os06g50410 DUF677 domain containing protein, putative gene DUF677 domain containing protein, putative chr6 30520810 30522036 - downstream 9 LOC_Os03g43460 hypothetical protein gene hypothetical protein chr3 24238149 24238580 - downstream 9 LOC_Os05g35510 hypothetical protein gene hypothetical protein chr5 21040807 21043710 + downstream 9 LOC_Os03g22130 hypothetical protein gene hypothetical protein chr3 12685943 12687203 + downstream 9 LOC_Os03g32190 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr3 18407200 18409514 - downstream 9 LOC_Os08g16300 hypothetical protein gene hypothetical protein chr8 9952539 9954297 - downstream 9 LOC_Os06g48940 GHMP kinases ATP-binding protein, putative, expressed gene GHMP kinases ATP-binding protein, putative, expressed chr6 29625218 29633691 + downstream 9 LOC_Os11g45580 embryogenesis transmembrane protein, putative, expressed gene embryogenesis transmembrane protein, putative, expressed chr11 27112010 27117573 - downstream 9 LOC_Os08g24770 protein kinase, putative, expressed gene protein kinase, putative, expressed chr8 14994571 15004117 + downstream 9 LOC_Os03g11590 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr3 6012137 6016199 - downstream 9 LOC_Os03g03800 hypothetical protein gene hypothetical protein chr3 1710304 1711928 - downstream 9 LOC_Os04g56040 glycine rich protein family protein, putative, expressed gene glycine rich protein family protein, putative, expressed chr4 33192227 33193294 - downstream 9 LOC_Os02g21630 SEC14 cytosolic factor family protein, putative, expressed gene SEC14 cytosolic factor family protein, putative, expressed chr2 12846467 12851439 + downstream 9 LOC_Os05g23790 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr5 13605907 13609502 + downstream 9 LOC_Os02g15860 expressed protein gene expressed protein chr2 8973730 8974014 + downstream 9 LOC_Os04g48270 OsFBX148 - F-box domain containing protein, expressed gene OsFBX148 - F-box domain containing protein, expressed chr4 28565903 28569263 + downstream 9 LOC_Os01g42950 protein kinase family protein, putative, expressed gene protein kinase family protein, putative, expressed chr1 24427596 24435385 + downstream 9 LOC_Os04g58180 WD-40 repeat family protein, putative, expressed gene WD-40 repeat family protein, putative, expressed chr4 34464430 34470106 + downstream 9 LOC_Os08g24590 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 14868353 14872077 + downstream 9 LOC_Os01g73020 mitochondrial import inner membrane translocase subunit Tim16, putative, expressed gene mitochondrial import inner membrane translocase subunit Tim16, putative, expressed chr1 42360282 42362621 - downstream 9 LOC_Os01g27140 OsGrx_C7 - glutaredoxin subgroup III, expressed gene OsGrx_C7 - glutaredoxin subgroup III, expressed chr1 15123605 15124372 + downstream 9 LOC_Os01g47660 60S ribosomal protein L18a, putative, expressed gene 60S ribosomal protein L18a, putative, expressed chr1 27265540 27267409 - downstream 9 LOC_Os01g19340 conserved hypothetical protein gene conserved hypothetical protein chr1 10944268 10944687 + downstream 9 LOC_Os04g42930 OsGrx_C2.2 - glutaredoxin subgroup I, expressed gene OsGrx_C2.2 - glutaredoxin subgroup I, expressed chr4 25211800 25214688 + downstream 9 LOC_Os03g19590 phytochrome B, putative, expressed gene phytochrome B, putative, expressed chr3 11018809 11026946 + downstream 9 LOC_Os07g44420 hypothetical protein gene hypothetical protein chr7 26545569 26546635 - downstream 9 LOC_Os12g32150 expressed protein gene expressed protein chr12 19363279 19364200 - downstream 9 LOC_Os12g40260 WD-40 repeat family protein, putative, expressed gene WD-40 repeat family protein, putative, expressed chr12 24881964 24883484 + downstream 9 LOC_Os05g03120 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr5 1240283 1245337 + downstream 9 LOC_Os01g22660 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr1 12741030 12745020 + downstream 9 LOC_Os01g25550 hypothetical protein gene hypothetical protein chr1 14483301 14483504 - downstream 9 LOC_Os12g39040 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 23979837 23980325 + downstream 9 LOC_Os07g15400 hypothetical protein gene hypothetical protein chr7 8897319 8897818 - downstream 9 LOC_Os04g34000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed gene digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed chr4 20415062 20421284 + downstream 9 LOC_Os05g27540 pattern formation protein EMB30, putative gene pattern formation protein EMB30, putative chr5 15968781 15970314 + downstream 9 LOC_Os08g43720 hypothetical protein gene hypothetical protein chr8 27627903 27628490 + downstream 9 LOC_Os01g21590 homeodomain, putative, expressed gene homeodomain, putative, expressed chr1 12090607 12092250 + downstream 9 LOC_Os08g38820 transmembrane 9 superfamily member, putative, expressed gene transmembrane 9 superfamily member, putative, expressed chr8 24534972 24539459 - downstream 9 LOC_Os05g40020 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr5 23447604 23448492 + downstream 9 LOC_Os09g24359 unknown gene unknown chr9 14477208 14477505 + downstream 9 LOC_Os10g12490 hypothetical protein gene hypothetical protein chr10 6960750 6961768 - downstream 9 LOC_Os05g50090 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed gene oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed chr5 28643260 28645878 - downstream 9 LOC_Os07g43190 conserved hypothetical protein gene conserved hypothetical protein chr7 25885864 25886274 + downstream 9 LOC_Os06g43260 hypothetical protein gene hypothetical protein chr6 25992669 25994758 - downstream 9 LOC_Os09g32920 hypothetical protein gene hypothetical protein chr9 19618356 19619770 - downstream 9 LOC_Os12g32840 hypothetical protein gene hypothetical protein chr12 19819131 19819800 + downstream 9 LOC_Os07g03760 26S proteasome non-ATPase regulatory subunit 14, putative gene 26S proteasome non-ATPase regulatory subunit 14, putative chr7 1540164 1542677 - downstream 9 LOC_Os05g34390 protein kinase domain containing protein gene protein kinase domain containing protein chr5 20321511 20328257 + downstream 9 LOC_Os08g04660 hypothetical protein gene hypothetical protein chr8 2329315 2329740 - downstream 9 LOC_Os02g48560 fatty acid desaturase, putative, expressed gene fatty acid desaturase, putative, expressed chr2 29719243 29724486 - downstream 9 LOC_Os04g29550 RIPER2 - Ripening-related family protein precursor, expressed gene RIPER2 - Ripening-related family protein precursor, expressed chr4 17388688 17389486 + downstream 9 LOC_Os12g27500 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 16186384 16188154 + downstream 9 LOC_Os05g40720 glycosyl transferase, family 8, putative gene glycosyl transferase, family 8, putative chr5 23811598 23815699 - downstream 9 LOC_Os02g16709 peptidase, putative, expressed gene peptidase, putative, expressed chr2 9544159 9550625 + downstream 9 LOC_Os03g45440 hypothetical protein gene hypothetical protein chr3 25646495 25648232 + downstream 9 LOC_Os02g33890 hypothetical protein gene hypothetical protein chr2 20189808 20192315 - downstream 9 LOC_Os01g42770 expressed protein gene expressed protein chr1 24340170 24342541 + downstream 9 LOC_Os10g01520 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 331989 335465 + downstream 9 LOC_Os10g04919 unknown gene unknown chr10 2404383 2404551 + downstream 9 LOC_Os01g73760 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr1 42722470 42725723 + downstream 9 LOC_Os12g26980 THION40 - Plant thionin family protein precursor gene THION40 - Plant thionin family protein precursor chr12 15802083 15802367 + downstream 9 LOC_Os01g33290 hypothetical protein gene hypothetical protein chr1 18348796 18350825 - downstream 9 LOC_Os05g35920 hypothetical protein gene hypothetical protein chr5 21234207 21234630 - downstream 9 LOC_Os07g07570 hypothetical protein gene hypothetical protein chr7 3785592 3785936 - downstream 9 LOC_Os10g23830 PPR repeat domain containing protein, putative gene PPR repeat domain containing protein, putative chr10 12152722 12153195 + downstream 9 LOC_Os09g35930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 20688444 20688733 + downstream 9 LOC_Os09g04040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 2077070 2081438 - downstream 9 LOC_Os12g08320 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr12 4230247 4231580 + downstream 9 LOC_Os08g13160 hypothetical protein gene hypothetical protein chr8 7818980 7819652 + downstream 9 LOC_Os01g53255 expressed protein gene expressed protein chr1 30599753 30600988 - downstream 9 LOC_Os04g33970 2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed gene 2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed chr4 20388010 20392951 + downstream 9 LOC_Os03g53400 transmembrane BAX inhibitor motif-containing protein, putative, expressed gene transmembrane BAX inhibitor motif-containing protein, putative, expressed chr3 30631909 30633034 + downstream 9 LOC_Os08g33870 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 21198173 21202141 - downstream 9 LOC_Os05g39510 hypothetical protein gene hypothetical protein chr5 23122434 23123856 - downstream 9 LOC_Os09g20800 hypothetical protein gene hypothetical protein chr9 12527112 12528106 - downstream 9 LOC_Os09g27430 hypothetical protein gene hypothetical protein chr9 16658578 16659351 + downstream 9 LOC_Os10g09150 hypothetical protein gene hypothetical protein chr10 4962287 4962950 - downstream 9 LOC_Os05g04720 conserved hypothetical protein gene conserved hypothetical protein chr5 2226396 2226608 + downstream 9 LOC_Os12g03040 no apical meristem protein, putative, expressed gene no apical meristem protein, putative, expressed chr12 1138026 1140362 + downstream 9 LOC_Os03g43040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 24008548 24011995 + downstream 9 LOC_Os08g30290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 18630213 18631561 - downstream 9 LOC_Os11g43170 hypothetical protein gene hypothetical protein chr11 25574533 25576109 + downstream 9 LOC_Os08g34984 DUF581 domain containing protein, expressed gene DUF581 domain containing protein, expressed chr8 22031391 22032681 + downstream 9 LOC_Os11g15490 hypothetical protein gene hypothetical protein chr11 8771321 8771966 - downstream 9 LOC_Os10g36070 LTPL155 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL155 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr10 19216573 19216875 - downstream 9 LOC_Os04g47920 hypothetical protein gene hypothetical protein chr4 28312923 28313198 + downstream 9 LOC_Os12g12765 expressed protein gene expressed protein chr12 7027584 7029488 - downstream 9 LOC_Os11g10940 hypothetical protein gene hypothetical protein chr11 6034919 6035472 + downstream 9 LOC_Os01g67134 ribosomal L18p/L5e family protein, putative, expressed gene ribosomal L18p/L5e family protein, putative, expressed chr1 38972601 38975494 + downstream 9 LOC_Os08g35620 HD domain containing protein, putative, expressed gene HD domain containing protein, putative, expressed chr8 22443827 22447829 + downstream 9 LOC_Os11g09070 conserved hypothetical protein gene conserved hypothetical protein chr11 4814077 4817486 - downstream 9 LOC_Os09g39500 ubiquitin fusion protein, putative, expressed gene ubiquitin fusion protein, putative, expressed chr9 22692186 22694404 + downstream 9 LOC_Os02g40900 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr2 24777326 24780696 - downstream 9 LOC_Os11g38410 hypothetical protein gene hypothetical protein chr11 22280878 22281312 - downstream 9 LOC_Os02g46100 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr2 28091110 28092164 - downstream 9 LOC_Os10g09740 hypothetical protein gene hypothetical protein chr10 5285660 5287298 - downstream 9 LOC_Os06g44910 OsGrx_C4 - glutaredoxin subgroup I, expressed gene OsGrx_C4 - glutaredoxin subgroup I, expressed chr6 27150479 27153089 + downstream 9 LOC_Os06g16600 RNA-directed DNA polymerase, putative gene RNA-directed DNA polymerase, putative chr6 9542522 9543930 - downstream 9 LOC_Os07g43600 ribonuclease T2 family domain containing protein gene ribonuclease T2 family domain containing protein chr7 26097145 26098920 + downstream 9 LOC_Os03g06000 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr3 2997851 2999003 + downstream 9 LOC_Os07g37840 lipase, putative, expressed gene lipase, putative, expressed chr7 22692164 22693499 - downstream 9 LOC_Os04g51800 MYB protein, putative gene MYB protein, putative chr4 30517372 30525873 + downstream 9 LOC_Os01g62120 hypothetical protein gene hypothetical protein chr1 35963264 35963701 + downstream 9 LOC_Os03g25240 OsFBX89 - F-box domain containing protein gene OsFBX89 - F-box domain containing protein chr3 14417712 14419051 + downstream 9 LOC_Os12g05010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 2175946 2177904 + downstream 9 LOC_Os06g04195 expressed protein gene expressed protein chr6 1760434 1761876 + downstream 9 LOC_Os02g30230 exo70 exocyst complex subunit domain containing protein, expressed gene exo70 exocyst complex subunit domain containing protein, expressed chr2 17969420 17975238 + downstream 9 LOC_Os11g35140 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 20134054 20137740 + downstream 9 LOC_Os01g58640 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed gene nucleotide pyrophosphatase/phosphodiesterase, putative, expressed chr1 33896172 33903474 + downstream 9 LOC_Os06g04530 OsClp9 - Putative Clp protease homologue, expressed gene OsClp9 - Putative Clp protease homologue, expressed chr6 1948425 1952326 + downstream 9 LOC_Os11g01020 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr11 2948 6498 + downstream 9 LOC_Os02g46300 hypothetical protein gene hypothetical protein chr2 28221060 28221482 - downstream 9 LOC_Os07g44550 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 26602643 26603976 + downstream 9 LOC_Os01g61550 ammonium transporter protein, putative, expressed gene ammonium transporter protein, putative, expressed chr1 35596049 35597975 - downstream 9 LOC_Os12g27240 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 15980282 15984976 - downstream 9 LOC_Os06g40880 polygalacturonase, putative, expressed gene polygalacturonase, putative, expressed chr6 24378830 24381171 + downstream 9 LOC_Os06g35530 CGMC_GSK.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed gene CGMC_GSK.8 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed chr6 20716743 20723747 + downstream 9 LOC_Os08g25839 expressed protein gene expressed protein chr8 15733528 15736093 - downstream 9 LOC_Os02g44654 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr2 27057169 27059365 - downstream 9 LOC_Os11g09735 expressed protein gene expressed protein chr11 5192144 5192973 + downstream 9 LOC_Os07g02250 expressed protein gene expressed protein chr7 721836 725496 - downstream 9 LOC_Os03g52890 hypothetical protein gene hypothetical protein chr3 30325231 30325626 + downstream 9 LOC_Os05g19490 hypothetical protein gene hypothetical protein chr5 11333304 11333910 + downstream 9 LOC_Os11g02120 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 578798 580488 - downstream 9 LOC_Os01g55900 holliday junction resolvase, putative, expressed gene holliday junction resolvase, putative, expressed chr1 32188887 32192418 + downstream 9 LOC_Os08g30650 hypothetical protein gene hypothetical protein chr8 18894464 18894893 - downstream 9 LOC_Os01g16800 hypothetical protein gene hypothetical protein chr1 9544496 9545015 - downstream 9 LOC_Os02g26280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 15423739 15429165 + downstream 9 LOC_Os01g64420 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 37383819 37388965 + downstream 9 LOC_Os11g08040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 4178511 4179702 - downstream 9 LOC_Os11g12750 unknown gene unknown chr11 7195855 7210302 - downstream 9 LOC_Os02g14580 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 8041112 8048125 + downstream 9 LOC_Os12g25260 conserved hypothetical protein gene conserved hypothetical protein chr12 14528246 14529435 + downstream 9 LOC_Os03g26120 hypothetical protein gene hypothetical protein chr3 14962374 14963274 - downstream 9 LOC_Os02g52850 receptor-like protein kinase like protein, putative, expressed gene receptor-like protein kinase like protein, putative, expressed chr2 32306997 32310123 - downstream 9 LOC_Os10g40220 expressed protein gene expressed protein chr10 21458974 21469475 + downstream 9 LOC_Os11g37110 conserved hypothetical protein gene conserved hypothetical protein chr11 21443513 21444742 - downstream 9 LOC_Os01g16380 conserved hypothetical protein gene conserved hypothetical protein chr1 9301114 9303093 - downstream 9 LOC_Os10g42196 expressed protein gene expressed protein chr10 22627595 22635584 - downstream 9 LOC_Os04g46570 growth regulator related protein, putative, expressed gene growth regulator related protein, putative, expressed chr4 27423284 27427365 - downstream 9 LOC_Os01g43940 oligopeptide transporter, putative gene oligopeptide transporter, putative chr1 25186206 25188473 + downstream 9 LOC_Os08g32420 hypothetical protein gene hypothetical protein chr8 20075808 20076781 + downstream 9 LOC_Os01g56700 hypothetical protein gene hypothetical protein chr1 32720401 32720736 + downstream 9 LOC_Os01g55250 hypothetical protein gene hypothetical protein chr1 31798858 31799670 + downstream 9 LOC_Os02g14700 conserved hypothetical protein gene conserved hypothetical protein chr2 8106665 8108740 + downstream 9 LOC_Os06g03200 hypothetical protein gene hypothetical protein chr6 1205454 1207952 - downstream 9 LOC_Os03g59540 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr3 33884841 33887484 - downstream 9 LOC_Os01g46380 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed gene ketol-acid reductoisomerase, chloroplast precursor, putative, expressed chr1 26391120 26395304 + downstream 9 LOC_Os07g05740 receptor-like protein kinase 2 precursor, putative, expressed gene receptor-like protein kinase 2 precursor, putative, expressed chr7 2756220 2760926 - downstream 9 LOC_Os04g24950 hypothetical protein gene hypothetical protein chr4 14361435 14363764 - downstream 9 LOC_Os05g03090 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 1214161 1221962 - downstream 9 LOC_Os10g05410 conserved hypothetical protein gene conserved hypothetical protein chr10 2666042 2668126 + downstream 9 LOC_Os04g03310 hypothetical protein gene hypothetical protein chr4 1404220 1405495 + downstream 9 LOC_Os01g11330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 6067798 6070736 + downstream 9 LOC_Os10g33020 hypothetical protein gene hypothetical protein chr10 17219468 17220166 - downstream 9 LOC_Os08g32740 hypothetical protein gene hypothetical protein chr8 20276585 20278085 + downstream 9 LOC_Os08g19320 aberrant root formation protein 4, putative, expressed gene aberrant root formation protein 4, putative, expressed chr8 11557455 11562793 - downstream 9 LOC_Os09g20040 resistance-like protein I2GA-SH194-2, putative, expressed gene resistance-like protein I2GA-SH194-2, putative, expressed chr9 12003418 12009545 + downstream 9 LOC_Os02g07800 transcription factor, putative, expressed gene transcription factor, putative, expressed chr2 4083020 4086044 + downstream 9 LOC_Os02g47380 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 28917818 28921944 - downstream 9 LOC_Os10g31490 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr10 16426493 16427251 - downstream 9 LOC_Os05g49340 conserved hypothetical protein gene conserved hypothetical protein chr5 28241984 28242490 + downstream 9 LOC_Os09g20210 hypothetical protein gene hypothetical protein chr9 12118293 12118696 + downstream 9 LOC_Os10g29430 RNA-directed DNA polymerase, putative gene RNA-directed DNA polymerase, putative chr10 15219113 15221715 - downstream 9 LOC_Os06g11500 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed gene MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed chr6 6085290 6096663 - downstream 9 LOC_Os07g40830 app1, putative, expressed gene app1, putative, expressed chr7 24465705 24466391 - downstream 9 LOC_Os10g34120 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr10 18136826 18141708 + downstream 9 LOC_Os11g08420 hypothetical protein gene hypothetical protein chr11 4433956 4436013 - downstream 9 LOC_Os01g59630 exostosin family domain containing protein, expressed gene exostosin family domain containing protein, expressed chr1 34484163 34488768 - downstream 9 LOC_Os04g14280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 7992660 7995486 - downstream 9 LOC_Os12g44260 heat shock protein DnaJ, putative gene heat shock protein DnaJ, putative chr12 27408160 27408829 - downstream 9 LOC_Os07g48440 conserved hypothetical protein gene conserved hypothetical protein chr7 28966882 28967472 - downstream 9 LOC_Os07g32180 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 19112300 19116522 - downstream 9 LOC_Os07g11620 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 6412077 6413081 - downstream 9 LOC_Os01g59410 VQ motif family protein, expressed gene VQ motif family protein, expressed chr1 34355597 34356407 + downstream 9 LOC_Os01g29860 conserved hypothetical protein gene conserved hypothetical protein chr1 16728097 16729883 - downstream 9 LOC_Os05g09700 conserved hypothetical protein gene conserved hypothetical protein chr5 5470783 5470989 + downstream 9 LOC_Os12g26680 conserved hypothetical protein gene conserved hypothetical protein chr12 15634168 15635277 - downstream 9 LOC_Os09g15480 Ser/Thr-rich protein T10 in DGCR region, putative, expressed gene Ser/Thr-rich protein T10 in DGCR region, putative, expressed chr9 9475394 9477844 - downstream 9 LOC_Os05g03930 hypothetical protein gene hypothetical protein chr5 1758716 1759016 + downstream 9 LOC_Os04g58660 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 34700486 34702118 - downstream 9 LOC_Os04g44870 C2 domain containing protein, putative, expressed gene C2 domain containing protein, putative, expressed chr4 26373683 26376199 + downstream 9 LOC_Os12g14630 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr12 8354519 8359757 - downstream 9 LOC_Os03g47614 hypothetical protein gene hypothetical protein chr3 26953945 26954543 + downstream 9 LOC_Os01g24540 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 13831305 13834399 - downstream 9 LOC_Os07g11700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 6469549 6471021 - downstream 9 LOC_Os07g03720 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 1516533 1520755 + downstream 9 LOC_Os12g39660 calcium-transporting ATPase, plasma membrane-type, putative, expressed gene calcium-transporting ATPase, plasma membrane-type, putative, expressed chr12 24451731 24457449 + downstream 9 LOC_Os07g07824 unknown gene unknown chr7 3921852 3925313 - downstream 9 LOC_Os11g36880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 21287715 21293965 - downstream 9 LOC_Os09g36380 hypothetical protein gene hypothetical protein chr9 20994752 20995183 - downstream 9 LOC_Os12g29640 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 17670317 17673638 - downstream 9 LOC_Os08g41560 ubiquitin carboxyl-terminal hydrolase, putative, expressed gene ubiquitin carboxyl-terminal hydrolase, putative, expressed chr8 26250773 26254127 - downstream 9 LOC_Os11g30990 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 17557176 17561583 - downstream 9 LOC_Os10g22080 hypothetical protein gene hypothetical protein chr10 11333526 11337743 + downstream 9 LOC_Os09g21090 hypothetical protein gene hypothetical protein chr9 12712093 12712344 - downstream 9 LOC_Os11g25410 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 14023511 14026768 + downstream 9 LOC_Os02g50680 AAA-type ATPase family protein, putative, expressed gene AAA-type ATPase family protein, putative, expressed chr2 30952740 30959409 - downstream 9 LOC_Os01g08070 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 3904249 3906429 + downstream 9 LOC_Os08g11590 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr8 6791419 6797073 + downstream 9 LOC_Os01g15600 PUR ALPHA-1, putative, expressed gene PUR ALPHA-1, putative, expressed chr1 8758370 8762491 + downstream 9 LOC_Os09g27310 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 16602552 16605767 - downstream 9 LOC_Os09g32095 expressed protein gene expressed protein chr9 19157833 19159080 - downstream 9 LOC_Os03g07600 calcium-binding protein, putative, expressed gene calcium-binding protein, putative, expressed chr3 3865506 3870351 - downstream 9 LOC_Os02g54280 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr2 33273645 33289238 - downstream 9 LOC_Os01g18220 expressed protein gene expressed protein chr1 10199452 10202670 - downstream 9 LOC_Os02g37350 conserved hypothetical protein gene conserved hypothetical protein chr2 22564835 22565659 + downstream 9 LOC_Os10g32010 hypothetical protein gene hypothetical protein chr10 16748326 16749437 + downstream 9 LOC_Os11g03850 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr11 1533933 1534800 - downstream 9 LOC_Os07g37960 exostosin family domain containing protein, expressed gene exostosin family domain containing protein, expressed chr7 22779115 22782765 + downstream 9 LOC_Os09g24330 TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed chr9 14462266 14468433 + downstream 9 LOC_Os08g11510 hypothetical protein gene hypothetical protein chr8 6751104 6751385 - downstream 9 LOC_Os12g43070 protein transport protein Sec61, putative gene protein transport protein Sec61, putative chr12 26718582 26718956 + downstream 9 LOC_Os01g22720 hypothetical protein gene hypothetical protein chr1 12764326 12768657 + downstream 9 LOC_Os02g14540 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein chr2 8018191 8019354 - downstream 9 LOC_Os12g04060 transcription initiation factor, putative, expressed gene transcription initiation factor, putative, expressed chr12 1707508 1710360 + downstream 9 LOC_Os08g12310 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 7253480 7254744 + downstream 9 LOC_Os01g52740 expressed protein gene expressed protein chr1 30338971 30340550 - downstream 9 LOC_Os11g20060 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 11547665 11551749 - downstream 9 LOC_Os11g46000 von Willebrand factor type A domain containing protein, putative, expressed gene von Willebrand factor type A domain containing protein, putative, expressed chr11 27369899 27375179 + downstream 9 LOC_Os06g51360 lysM domain containing protein, putative, expressed gene lysM domain containing protein, putative, expressed chr6 31104335 31106969 + downstream 9 LOC_Os08g03610 LSD1 zinc finger domain containing protein, expressed gene LSD1 zinc finger domain containing protein, expressed chr8 1685246 1687806 - downstream 9 LOC_Os08g09050 hypothetical protein gene hypothetical protein chr8 5255440 5258172 + downstream 9 LOC_Os06g05368 expressed protein gene expressed protein chr6 2417702 2421486 + downstream 9 LOC_Os01g09220 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr1 4645427 4647260 + downstream 9 LOC_Os10g09170 hypothetical protein gene hypothetical protein chr10 4968570 4971793 - downstream 9 LOC_Os01g69000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 40083351 40084706 + downstream 9 LOC_Os01g50470 regulator of chromosome condensation, putative, expressed gene regulator of chromosome condensation, putative, expressed chr1 28977074 28982823 + downstream 9 LOC_Os06g12350 amino acid transporter, putative, expressed gene amino acid transporter, putative, expressed chr6 6690062 6694071 - downstream 9 LOC_Os04g39610 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed gene glycerophosphoryl diester phosphodiesterase family protein, putative, expressed chr4 23421483 23426363 + downstream 9 LOC_Os05g11280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 6367844 6369331 - downstream 9 LOC_Os08g12590 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr8 7448478 7449298 + downstream 9 LOC_Os01g56640 transcription factor jumonji, putative, expressed gene transcription factor jumonji, putative, expressed chr1 32674396 32680363 - downstream 9 LOC_Os03g42510 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 23646066 23649568 - downstream 9 LOC_Os04g43570 hypothetical protein gene hypothetical protein chr4 25599354 25599716 - downstream 9 LOC_Os03g19810 hypothetical protein gene hypothetical protein chr3 11152650 11154031 - downstream 9 LOC_Os07g48140 ATOFP17/OFP17, putative gene ATOFP17/OFP17, putative chr7 28751687 28752316 - downstream 9 LOC_Os03g21999 expressed protein gene expressed protein chr3 12604776 12607484 - downstream 9 LOC_Os12g39230 hypothetical protein gene hypothetical protein chr12 24114593 24116967 - downstream 9 LOC_Os09g29150 hypothetical protein gene hypothetical protein chr9 17728236 17728895 + downstream 9 LOC_Os02g50140 caleosin related protein, putative, expressed gene caleosin related protein, putative, expressed chr2 30625370 30626899 + downstream 9 LOC_Os07g34030 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed gene OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed chr7 20340013 20346769 + downstream 9 LOC_Os08g03460 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 1624512 1626491 - downstream 9 LOC_Os12g31150 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 18724095 18727792 + downstream 9 LOC_Os02g20260 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 11927142 11930326 - downstream 9 LOC_Os08g13740 hypothetical protein gene hypothetical protein chr8 8190430 8191257 - downstream 9 LOC_Os09g07280 hypothetical protein gene hypothetical protein chr9 3576888 3579495 + downstream 9 LOC_Os06g04080 glycosyl hydrolases family 17, putative, expressed gene glycosyl hydrolases family 17, putative, expressed chr6 1690886 1693141 + downstream 9 LOC_Os05g25000 conserved hypothetical protein gene conserved hypothetical protein chr5 14410407 14411683 + downstream 9 LOC_Os02g55060 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed gene cytochrome b5-like Heme/Steroid binding domain containing protein, expressed chr2 33721180 33722215 + downstream 9 LOC_Os10g34680 vacuolar protein sorting-associated protein 52, putative, expressed gene vacuolar protein sorting-associated protein 52, putative, expressed chr10 18415034 18425287 + downstream 9 LOC_Os07g09280 expressed protein gene expressed protein chr7 4862184 4863330 + downstream 9 LOC_Os06g30810 OsMADS75 - MADS-box family gene with M-alpha type-box gene OsMADS75 - MADS-box family gene with M-alpha type-box chr6 17868246 17868878 - downstream 9 LOC_Os05g48980 ras-related protein, putative, expressed gene ras-related protein, putative, expressed chr5 28030180 28031935 - downstream 9 LOC_Os04g43370 pectinesterase, putative gene pectinesterase, putative chr4 25460981 25461537 - downstream 9 LOC_Os11g38400 hypothetical protein gene hypothetical protein chr11 22272608 22272991 - downstream 9 LOC_Os03g55420 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr3 31523654 31526404 + downstream 9 LOC_Os05g04400 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 2023668 2025848 + downstream 9 LOC_Os07g08430 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed gene indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed chr7 4329347 4332643 - downstream 9 LOC_Os03g28430 hypothetical protein gene hypothetical protein chr3 16378655 16379630 - downstream 9 LOC_Os06g20200 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr6 11585344 11587080 + downstream 9 LOC_Os06g19279 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 10967163 10972327 + downstream 9 LOC_Os08g02190 expressed protein gene expressed protein chr8 739821 744515 - downstream 9 LOC_Os05g08340 hypothetical protein gene hypothetical protein chr5 4548236 4549683 - downstream 9 LOC_Os07g05084 expressed protein gene expressed protein chr7 2242675 2244571 + downstream 9 LOC_Os01g55610 peptide transporter PTR2, putative, expressed gene peptide transporter PTR2, putative, expressed chr1 32036974 32039334 - downstream 9 LOC_Os06g03020 hypothetical protein gene hypothetical protein chr6 1109267 1109749 - downstream 9 LOC_Os01g16980 expressed protein gene expressed protein chr1 9710591 9711395 - downstream 9 LOC_Os04g28850 RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed gene RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed chr4 16925765 16926437 + downstream 9 LOC_Os07g28100 hypothetical protein gene hypothetical protein chr7 16393438 16393875 - downstream 9 LOC_Os11g09560 hypothetical protein gene hypothetical protein chr11 5116831 5117127 + downstream 9 LOC_Os01g16430 cysteine proteinase inhibitor precursor protein, putative, expressed gene cysteine proteinase inhibitor precursor protein, putative, expressed chr1 9324521 9328310 - downstream 9 LOC_Os05g26130 hypothetical protein gene hypothetical protein chr5 15139673 15139933 - downstream 9 LOC_Os01g50700 dehydrin family protein, expressed gene dehydrin family protein, expressed chr1 29118716 29123591 + downstream 9 LOC_Os11g01390 OsCML25 - Calmodulin-related calcium sensor protein gene OsCML25 - Calmodulin-related calcium sensor protein chr11 244190 244639 - downstream 9 LOC_Os01g46870 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr1 26732970 26734472 - downstream 9 LOC_Os04g44170 hypothetical protein gene hypothetical protein chr4 25963134 25963754 - downstream 9 LOC_Os07g29930 expressed protein gene expressed protein chr7 17619262 17620339 + downstream 9 LOC_Os01g67620 hypothetical protein gene hypothetical protein chr1 39304470 39305168 - downstream 9 LOC_Os06g42470 expressed protein gene expressed protein chr6 25523540 25524262 - downstream 9 LOC_Os06g02660 hypothetical protein gene hypothetical protein chr6 946958 948607 + downstream 9 LOC_Os07g47950 conserved hypothetical protein gene conserved hypothetical protein chr7 28636855 28641784 + downstream 9 LOC_Os12g31530 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 18934665 18936079 - downstream 9 LOC_Os06g35520 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 20704352 20706000 - downstream 9 LOC_Os02g54560 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr2 33419080 33420693 + downstream 9 LOC_Os12g01810 hypothetical protein gene hypothetical protein chr12 487872 488606 - downstream 9 LOC_Os04g54070 receptor-like kinase, putative gene receptor-like kinase, putative chr4 32038008 32041844 - downstream 9 LOC_Os08g02550 proteasome subunit, putative, expressed gene proteasome subunit, putative, expressed chr8 1049620 1054102 + downstream 9 LOC_Os11g47433 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 28035055 28035288 + downstream 9 LOC_Os12g05600 hydrolase, alpha/beta fold family protein, putative, expressed gene hydrolase, alpha/beta fold family protein, putative, expressed chr12 2570625 2572917 + downstream 9 LOC_Os03g55730 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed gene SSA2 - 2S albumin seed storage family protein precursor, putative, expressed chr3 31718848 31725142 - downstream 9 LOC_Os09g11170 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr9 6194158 6195917 + downstream 9 LOC_Os03g16850 dof zinc finger domain containing protein, putative gene dof zinc finger domain containing protein, putative chr3 9358402 9359871 - downstream 9 LOC_Os01g12780 hypothetical protein gene hypothetical protein chr1 7075271 7075777 - downstream 9 LOC_Os04g40670 expressed protein gene expressed protein chr4 23954213 23957271 - downstream 9 LOC_Os06g11260 12-oxophytodienoate reductase 2, putative, expressed gene 12-oxophytodienoate reductase 2, putative, expressed chr6 5904265 5905019 - downstream 9 LOC_Os09g22450 lipase, putative, expressed gene lipase, putative, expressed chr9 13558547 13562070 + downstream 9 LOC_Os06g17090 UDP-glycosyltransferase, putative gene UDP-glycosyltransferase, putative chr6 9909739 9910845 + downstream 9 LOC_Os02g27470 importin-7, putative, expressed gene importin-7, putative, expressed chr2 16202461 16210607 + downstream 9 LOC_Os08g30070 expressed protein gene expressed protein chr8 18478226 18484052 - downstream 9 LOC_Os03g41600 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr3 23126471 23127394 + downstream 9 LOC_Os06g04310 hypothetical protein gene hypothetical protein chr6 1827170 1830737 - downstream 9 LOC_Os07g36510 hypothetical protein gene hypothetical protein chr7 21827031 21829985 - downstream 9 LOC_Os09g26500 CXE carboxylesterase, putative, expressed gene CXE carboxylesterase, putative, expressed chr9 16011760 16014413 + downstream 9 LOC_Os08g44560 expressed protein gene expressed protein chr8 28011344 28017541 + downstream 9 LOC_Os03g50690 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 28936620 28937804 - downstream 9 LOC_Os11g07660 hypothetical protein gene hypothetical protein chr11 3909167 3909636 + downstream 9 LOC_Os01g43639 unknown gene unknown chr1 25003079 25003658 + downstream 9 LOC_Os07g11300 expressed protein gene expressed protein chr7 6233812 6235854 - downstream 9 LOC_Os08g44720 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 28098763 28101496 - downstream 9 LOC_Os07g13930 OsFBX231 - F-box domain containing protein, expressed gene OsFBX231 - F-box domain containing protein, expressed chr7 7965465 7966819 + downstream 9 LOC_Os11g05630 CBL-interacting protein kinase, putative gene CBL-interacting protein kinase, putative chr11 2550135 2550680 - downstream 9 LOC_Os04g57830 expressed protein gene expressed protein chr4 34251552 34253603 + downstream 9 LOC_Os03g59320 expressed protein gene expressed protein chr3 33764626 33766494 + downstream 9 LOC_Os02g51020 expressed protein gene expressed protein chr2 31196328 31197913 + downstream 9 LOC_Os01g68710 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed gene peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed chr1 39912847 39915451 - downstream 9 LOC_Os09g27260 plant viral response family protein, putative, expressed gene plant viral response family protein, putative, expressed chr9 16572499 16573892 - downstream 9 LOC_Os10g05160 conserved hypothetical protein gene conserved hypothetical protein chr10 2516942 2519460 + downstream 9 LOC_Os04g10219 hypothetical protein gene hypothetical protein chr4 5518288 5518999 - downstream 9 LOC_Os07g03359 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 1349294 1350051 - downstream 9 LOC_Os03g60260 ANT1, putative, expressed gene ANT1, putative, expressed chr3 34264186 34265937 + downstream 9 LOC_Os04g34070 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 20458075 20462297 - downstream 9 LOC_Os04g30680 conserved hypothetical protein gene conserved hypothetical protein chr4 18166522 18166899 - downstream 9 LOC_Os04g53290 polyphenol oxidase protein, putative gene polyphenol oxidase protein, putative chr4 31555706 31556341 + downstream 9 LOC_Os08g05510 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr8 2933789 2939200 + downstream 9 LOC_Os01g06240 protein kinase, putative, expressed gene protein kinase, putative, expressed chr1 2961422 2963917 - downstream 9 LOC_Os10g10060 conserved hypothetical protein gene conserved hypothetical protein chr10 5487469 5488012 - downstream 9 LOC_Os05g13520 white-brown complex homolog protein 12, putative, expressed gene white-brown complex homolog protein 12, putative, expressed chr5 7492627 7498325 - downstream 9 LOC_Os04g29600 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 17428544 17431273 - downstream 9 LOC_Os03g25110 expressed protein gene expressed protein chr3 14335810 14340397 + downstream 9 LOC_Os07g16730 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr7 9817972 9818596 - downstream 9 LOC_Os05g04630 retrotransposon protein, putative, SINE subclass, expressed gene retrotransposon protein, putative, SINE subclass, expressed chr5 2174847 2179093 + downstream 9 LOC_Os01g06320 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 3002658 3004728 - downstream 9 LOC_Os03g60020 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 34130215 34135316 + downstream 9 LOC_Os11g02410 hypothetical protein gene hypothetical protein chr11 719750 720923 - downstream 9 LOC_Os07g13240 hypothetical protein gene hypothetical protein chr7 7593881 7594694 + downstream 9 LOC_Os08g08800 hypothetical protein gene hypothetical protein chr8 5095821 5098405 + downstream 9 LOC_Os01g69250 mitochondrial import receptor subunit TOM20, putative, expressed gene mitochondrial import receptor subunit TOM20, putative, expressed chr1 40239764 40243693 + downstream 9 LOC_Os02g32650 expressed protein gene expressed protein chr2 19346708 19349026 - downstream 9 LOC_Os06g22150 hypothetical protein gene hypothetical protein chr6 12859094 12859591 - downstream 9 LOC_Os02g27570 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 16318446 16323865 - downstream 9 LOC_Os04g56090 S-locus-like receptor protein kinase, putative gene S-locus-like receptor protein kinase, putative chr4 33222250 33224694 + downstream 9 LOC_Os03g63620 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr3 35915637 35916806 + downstream 9 LOC_Os06g32900 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 19146691 19154394 + downstream 9 LOC_Os02g45090 expressed protein gene expressed protein chr2 27346200 27351144 - downstream 9 LOC_Os03g23040 hypothetical protein gene hypothetical protein chr3 13309950 13311613 + downstream 9 LOC_Os04g39340 hypothetical protein gene hypothetical protein chr4 23231878 23232330 + downstream 9 LOC_Os03g53610 late embryogenesis abundant protein D-34, putative gene late embryogenesis abundant protein D-34, putative chr3 30733744 30734654 - downstream 9 LOC_Os04g20760 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 11637657 11639129 - downstream 9 LOC_Os06g33070 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 19252175 19256587 + downstream 9 LOC_Os03g63360 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr3 35798908 35801784 - downstream 9 LOC_Os05g32790 hypothetical protein gene hypothetical protein chr5 19145540 19145937 - downstream 9 LOC_Os03g45850 OsSAUR16 - Auxin-responsive SAUR gene family member gene OsSAUR16 - Auxin-responsive SAUR gene family member chr3 25891218 25892897 + downstream 9 LOC_Os02g20540 fasciclin domain containing protein, expressed gene fasciclin domain containing protein, expressed chr2 12113830 12114971 - downstream 9 LOC_Os04g49490 protein phosphatase 2C, putative, expressed gene protein phosphatase 2C, putative, expressed chr4 29329914 29333302 - downstream 9 LOC_Os02g44720 expressed protein gene expressed protein chr2 27091880 27092730 - downstream 9 LOC_Os12g28740 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 16974935 16978635 + downstream 9 LOC_Os06g19960 aconitate hydratase protein, putative gene aconitate hydratase protein, putative chr6 11438153 11446644 + downstream 9 LOC_Os02g33450 peroxiredoxin, putative, expressed gene peroxiredoxin, putative, expressed chr2 19876184 19880477 + downstream 9 LOC_Os03g42954 conserved hypothetical protein gene conserved hypothetical protein chr3 23952259 23953044 - downstream 9 LOC_Os07g01100 legume lectins beta domain containing protein, putative, expressed gene legume lectins beta domain containing protein, putative, expressed chr7 55259 57217 - downstream 9 LOC_Os01g39710 hypothetical protein gene hypothetical protein chr1 22394549 22396993 - downstream 9 LOC_Os06g51160 glycosyl transferase family 8, putative gene glycosyl transferase family 8, putative chr6 30947621 30950472 - downstream 9 LOC_Os02g03170 inhibitor I family protein, putative gene inhibitor I family protein, putative chr2 1258361 1258591 + downstream 9 LOC_Os12g30590 disease resistance protein RGA2, putative, expressed gene disease resistance protein RGA2, putative, expressed chr12 18341141 18345184 + downstream 9 LOC_Os05g51230 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed gene phosphatidylinositol 3- and 4-kinase family protein, putative, expressed chr5 29319440 29321893 + downstream 9 LOC_Os03g44870 hypothetical protein gene hypothetical protein chr3 25311400 25312441 - downstream 9 LOC_Os03g06350 DUF623 domain containing protein, expressed gene DUF623 domain containing protein, expressed chr3 3177088 3178586 - downstream 9 LOC_Os11g44014 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 26115741 26127677 - downstream 9 LOC_Os11g07190 hypothetical protein gene hypothetical protein chr11 3589704 3590827 + downstream 9 LOC_Os01g69060 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr1 40132019 40137308 + downstream 9 LOC_Os10g23280 hypothetical protein gene hypothetical protein chr10 12078854 12079803 - downstream 9 LOC_Os01g70900 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 41030732 41033905 + downstream 9 LOC_Os10g31310 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr10 16351457 16352432 + downstream 9 LOC_Os08g05470 expressed protein gene expressed protein chr8 2908612 2911541 - downstream 9 LOC_Os12g32890 hypothetical protein gene hypothetical protein chr12 19848235 19849516 - downstream 9 LOC_Os12g08830 thylakoid lumenal 29.8 kDa protein, putative, expressed gene thylakoid lumenal 29.8 kDa protein, putative, expressed chr12 4554843 4557031 - downstream 9 LOC_Os10g40700 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr10 21758627 21760170 - downstream 9 LOC_Os06g30670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 17760839 17767043 - downstream 9 LOC_Os05g39810 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 23327255 23330573 - downstream 9 LOC_Os01g62510 WRKY DNA binding domain containing protein gene WRKY DNA binding domain containing protein chr1 36187659 36190638 - downstream 9 LOC_Os06g08200 hypothetical protein gene hypothetical protein chr6 3974757 3975129 - downstream 9 LOC_Os08g33610 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 20981862 20982918 - downstream 9 LOC_Os06g06530 proline-rich cell wall protein-like, putative, expressed gene proline-rich cell wall protein-like, putative, expressed chr6 3059005 3062608 - downstream 9 LOC_Os05g24760 harpin-induced protein 1 domain containing protein gene harpin-induced protein 1 domain containing protein chr5 14297739 14298380 + downstream 9 LOC_Os01g70980 expressed protein gene expressed protein chr1 41084858 41087125 - downstream 9 LOC_Os10g38860 hydrolase, alpha/beta fold family domain containing protein, expressed gene hydrolase, alpha/beta fold family domain containing protein, expressed chr10 20621029 20624735 - downstream 9 LOC_Os04g43390 Os4bglu16 - monolignol beta-glucoside homologue, expressed gene Os4bglu16 - monolignol beta-glucoside homologue, expressed chr4 25473088 25481591 + downstream 9 LOC_Os02g26200 hypothetical protein gene hypothetical protein chr2 15385454 15388101 - downstream 9 LOC_Os04g23930 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 13676168 13679714 + downstream 9 LOC_Os09g24540 peptidyl-prolyl cis-trans isomerase, putative, expressed gene peptidyl-prolyl cis-trans isomerase, putative, expressed chr9 14609698 14612280 - downstream 9 LOC_Os06g36590 transporter, monovalent cation:proton antiporter-2 family, putative, expressed gene transporter, monovalent cation:proton antiporter-2 family, putative, expressed chr6 21492137 21500377 + downstream 9 LOC_Os08g30884 elongation factor Ts, putative, expressed gene elongation factor Ts, putative, expressed chr8 19056904 19063196 - downstream 9 LOC_Os03g09310 frigida, putative, expressed gene frigida, putative, expressed chr3 4861185 4865741 - downstream 9 LOC_Os06g46470 hypothetical protein gene hypothetical protein chr6 28204290 28204619 - downstream 9 LOC_Os03g05490 ZOS3-02 - C2H2 zinc finger protein gene ZOS3-02 - C2H2 zinc finger protein chr3 2716727 2717323 - downstream 9 LOC_Os03g28130 OsFBX94 - F-box domain containing protein, expressed gene OsFBX94 - F-box domain containing protein, expressed chr3 16169978 16171516 - downstream 9 LOC_Os02g53810 expressed protein gene expressed protein chr2 32951550 32955521 + downstream 9 LOC_Os11g43990 expressed protein gene expressed protein chr11 26105530 26110600 - downstream 9 LOC_Os03g24090 hypothetical protein gene hypothetical protein chr3 13674702 13675783 + downstream 9 LOC_Os11g36520 hypothetical protein gene hypothetical protein chr11 21083118 21084176 - downstream 9 LOC_Os05g28190 ranBP1 domain containing protein, expressed gene ranBP1 domain containing protein, expressed chr5 16445417 16449106 - downstream 9 LOC_Os03g21210 endoglucanase, putative, expressed gene endoglucanase, putative, expressed chr3 12102799 12107152 - downstream 9 LOC_Os08g05290 receptor-like protein kinase 5 precursor, putative, expressed gene receptor-like protein kinase 5 precursor, putative, expressed chr8 2770091 2773527 + downstream 9 LOC_Os10g21620 hypothetical protein gene hypothetical protein chr10 11003194 11003777 - downstream 9 LOC_Os05g48520 glyoxal oxidase-related, putative, expressed gene glyoxal oxidase-related, putative, expressed chr5 27744441 27747174 - downstream 9 LOC_Os01g13730 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr1 7678030 7684923 + downstream 9 LOC_Os05g44930 receptor-like protein kinase, putative, expressed gene receptor-like protein kinase, putative, expressed chr5 26050697 26055431 + downstream 9 LOC_Os07g17960 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 10624096 10627289 - downstream 9 LOC_Os11g06660 hypothetical protein gene hypothetical protein chr11 3239913 3240191 - downstream 9 LOC_Os09g26190 CBS domain containing protein, expressed gene CBS domain containing protein, expressed chr9 15789767 15799950 + downstream 9 LOC_Os03g42490 hypothetical protein gene hypothetical protein chr3 23640062 23640385 - downstream 9 LOC_Os01g62469 unknown gene unknown chr1 36163376 36164097 - downstream 9 LOC_Os01g55450 CAMK_KIN1/SNF1/Nim1_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_KIN1/SNF1/Nim1_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr1 31942484 31947536 - downstream 9 LOC_Os12g38220 hypothetical protein gene hypothetical protein chr12 23449664 23449939 - downstream 9 LOC_Os04g34880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 21006308 21007468 + downstream 9 LOC_Os05g34730 ethylene-responsive transcription factor ERF020, putative, expressed gene ethylene-responsive transcription factor ERF020, putative, expressed chr5 20538702 20539295 - downstream 9 LOC_Os04g32490 tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed gene tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed chr4 19326301 19332840 - downstream 9 LOC_Os04g08640 cadmium tolerance factor, putative, expressed gene cadmium tolerance factor, putative, expressed chr4 4686337 4687793 + downstream 9 LOC_Os04g09990 hypothetical protein gene hypothetical protein chr4 5372703 5374624 + downstream 9 LOC_Os02g18740 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 10929025 10931388 + downstream 9 LOC_Os07g37010 cyclin, putative, expressed gene cyclin, putative, expressed chr7 22168518 22170939 - downstream 9 LOC_Os08g11490 hypothetical protein gene hypothetical protein chr8 6741488 6741883 - downstream 9 LOC_Os08g41350 FAD-binding domain-containing protein, putative gene FAD-binding domain-containing protein, putative chr8 26121881 26122584 + downstream 9 LOC_Os01g22770 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 12802300 12802683 - downstream 9 LOC_Os10g24880 hypothetical protein gene hypothetical protein chr10 12718959 12719498 - downstream 9 LOC_Os05g03740 transcription factor TF2, putative, expressed gene transcription factor TF2, putative, expressed chr5 1643432 1644730 + downstream 9 LOC_Os06g34600 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 20120528 20124292 - downstream 9 LOC_Os07g41390 hypothetical protein gene hypothetical protein chr7 24799538 24803072 + downstream 9 LOC_Os09g37520 DUF630/DUF632 domains containing protein, putative, expressed gene DUF630/DUF632 domains containing protein, putative, expressed chr9 21630337 21636311 + downstream 9 LOC_Os01g02999 unknown gene unknown chr1 1137880 1138573 + downstream 9 LOC_Os04g03350 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 1433987 1437555 + downstream 9 LOC_Os10g14140 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 7688621 7689367 - downstream 9 LOC_Os07g47720 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr7 28502067 28504502 - downstream 9 LOC_Os04g33020 hypothetical protein gene hypothetical protein chr4 19812120 19812680 + downstream 9 LOC_Os05g40060 OsWRKY48 - Superfamily of TFs having WRKY and zinc finger domains, expressed gene OsWRKY48 - Superfamily of TFs having WRKY and zinc finger domains, expressed chr5 23466844 23467920 - downstream 9 LOC_Os10g39060 hypothetical protein gene hypothetical protein chr10 20751844 20752700 + downstream 9 LOC_Os08g20230 hypothetical protein gene hypothetical protein chr8 12139956 12142492 - downstream 9 LOC_Os04g25210 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr4 14567230 14569226 - downstream 9 LOC_Os11g31880 phosphoglycerate mutase, putative, expressed gene phosphoglycerate mutase, putative, expressed chr11 18262778 18267243 + downstream 9 LOC_Os11g35920 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 20626191 20636506 - downstream 9 LOC_Os09g30478 expressed protein gene expressed protein chr9 18575958 18580279 + downstream 9 LOC_Os06g19360 cadmium tolerance factor, putative gene cadmium tolerance factor, putative chr6 11012860 11016482 - downstream 9 LOC_Os03g04169 ATP phosphoribosyltransferase, putative, expressed gene ATP phosphoribosyltransferase, putative, expressed chr3 1908197 1918537 + downstream 9 LOC_Os02g02590 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr2 938314 941308 - downstream 9 LOC_Os01g01420 expressed protein gene expressed protein chr1 208771 213229 + downstream 9 LOC_Os01g50880 hypothetical protein gene hypothetical protein chr1 29225510 29225919 + downstream 9 LOC_Os03g52220 unknown gene unknown chr3 29972857 29973387 + downstream 9 LOC_Os11g41060 hypothetical protein gene hypothetical protein chr11 24126736 24127051 + downstream 9 LOC_Os02g40640 hypothetical protein gene hypothetical protein chr2 24635414 24636112 - downstream 9 LOC_Os04g53530 expressed protein gene expressed protein chr4 31710147 31715587 + downstream 9 LOC_Os02g54410 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 33334661 33339617 - downstream 9 LOC_Os03g46780 hypothetical protein gene hypothetical protein chr3 26455337 26457466 - downstream 9 LOC_Os09g02100 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 774719 778050 - downstream 9 LOC_Os01g41220 DUF538 domain containing protein, putative, expressed gene DUF538 domain containing protein, putative, expressed chr1 23331962 23336550 + downstream 9 LOC_Os01g10740 hypothetical protein gene hypothetical protein chr1 5747869 5748270 - downstream 9 LOC_Os04g26950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 15766821 15768732 - downstream 9 LOC_Os09g27180 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr9 16520438 16524392 - downstream 9 LOC_Os02g37700 lecithin:cholesterol acyltransferase, putative, expressed gene lecithin:cholesterol acyltransferase, putative, expressed chr2 22750541 22752357 - downstream 9 LOC_Os03g27580 conserved hypothetical protein gene conserved hypothetical protein chr3 15810863 15811720 + downstream 9 LOC_Os06g41520 OsFBX200 - F-box domain containing protein gene OsFBX200 - F-box domain containing protein chr6 24893279 24894834 - downstream 9 LOC_Os07g48040 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr7 28683126 28684871 + downstream 9 LOC_Os01g14540 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed gene STIGL1 - Stigma-specific Stig1 family protein precursor, expressed chr1 8151630 8152685 - downstream 9 LOC_Os01g29850 hypothetical protein gene hypothetical protein chr1 16726018 16727831 + downstream 9 LOC_Os11g15360 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 8689582 8694415 + downstream 9 LOC_Os04g06290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 3284139 3289759 + downstream 9 LOC_Os02g52880 ybaK/prolyl-tRNA synthetase family protein, putative, expressed gene ybaK/prolyl-tRNA synthetase family protein, putative, expressed chr2 32320211 32324266 - downstream 9 LOC_Os05g31860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 18483686 18488892 - downstream 9 LOC_Os05g33340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 19492118 19506688 - downstream 9 LOC_Os06g07370 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr6 3542442 3544712 + downstream 9 LOC_Os03g15430 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr3 8436299 8440908 - downstream 9 LOC_Os01g01990 expressed protein gene expressed protein chr1 532786 533139 + downstream 9 LOC_Os11g29410 hypothetical protein gene hypothetical protein chr11 16608633 16612943 - downstream 9 LOC_Os06g21940 hypothetical protein gene hypothetical protein chr6 12689957 12690373 - downstream 9 LOC_Os03g61500 uncharacterized Cys-rich domain containing protein, putative gene uncharacterized Cys-rich domain containing protein, putative chr3 34876681 34877340 - downstream 9 LOC_Os04g03539 unknown gene unknown chr4 1535135 1535299 + downstream 9 LOC_Os03g10320 expressed protein gene expressed protein chr3 5260710 5262669 + downstream 9 LOC_Os02g42380 TCP family transcription factor, putative, expressed gene TCP family transcription factor, putative, expressed chr2 25491456 25492560 + downstream 9 LOC_Os01g09240 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr1 4661839 4663301 - downstream 9 LOC_Os05g42320 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 24686488 24692643 - downstream 9 LOC_Os02g29710 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 17668816 17669322 - downstream 9 LOC_Os12g36480 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 22287045 22291790 + downstream 9 LOC_Os06g39500 hypothetical protein gene hypothetical protein chr6 23450678 23451183 - downstream 9 LOC_Os10g40550 CPuORF23 - conserved peptide uORF-containing transcript, expressed gene CPuORF23 - conserved peptide uORF-containing transcript, expressed chr10 21635387 21639455 - downstream 9 LOC_Os12g17680 hypothetical protein gene hypothetical protein chr12 10122582 10123528 - downstream 9 LOC_Os03g55400 expressed protein gene expressed protein chr3 31510236 31511761 - downstream 9 LOC_Os07g49130 hypothetical protein gene hypothetical protein chr7 29427430 29427777 + downstream 9 LOC_Os02g50980 expressed protein gene expressed protein chr2 31178954 31179649 + downstream 9 LOC_Os05g44160 expressed protein gene expressed protein chr5 25600435 25602986 + downstream 9 LOC_Os05g45340 ATP binding protein, putative, expressed gene ATP binding protein, putative, expressed chr5 26237770 26243058 + downstream 9 LOC_Os01g70360 serine palmitoyltransferase 2, putative, expressed gene serine palmitoyltransferase 2, putative, expressed chr1 40758289 40762868 - downstream 9 LOC_Os06g24150 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 14132477 14134327 + downstream 9 LOC_Os12g21850 OsMADS73 - MADS-box family gene with M-alpha type-box, expressed gene OsMADS73 - MADS-box family gene with M-alpha type-box, expressed chr12 12300816 12301400 - downstream 9 LOC_Os08g41710 FHA domain containing protein, putative, expressed gene FHA domain containing protein, putative, expressed chr8 26322282 26325910 + downstream 9 LOC_Os01g42100 hypothetical protein gene hypothetical protein chr1 23874269 23875170 - downstream 9 LOC_Os07g44680 hypothetical protein gene hypothetical protein chr7 26661133 26661780 - downstream 9 LOC_Os08g38030 hypothetical protein gene hypothetical protein chr8 24088921 24091522 - downstream 9 LOC_Os03g19890 NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed gene NADH dehydrogenase 1 alpha subcomplex subunit 5, putative, expressed chr3 11179673 11182680 + downstream 9 LOC_Os06g46500 monocopper oxidase, putative, expressed gene monocopper oxidase, putative, expressed chr6 28233423 28237463 - downstream 9 LOC_Os04g08160 conserved hypothetical protein gene conserved hypothetical protein chr4 4339366 4340661 - downstream 9 LOC_Os02g38100 hypothetical protein gene hypothetical protein chr2 23028359 23029720 + downstream 9 LOC_Os12g18080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 10388080 10392546 + downstream 9 LOC_Os10g01760 peroxidase precursor, putative gene peroxidase precursor, putative chr10 487915 488448 - downstream 9 LOC_Os01g66250 S-locus-like receptor protein kinase, putative, expressed gene S-locus-like receptor protein kinase, putative, expressed chr1 38480192 38482964 + downstream 9 LOC_Os10g02870 conserved hypothetical protein gene conserved hypothetical protein chr10 1158925 1160632 + downstream 9 LOC_Os07g31650 expressed protein gene expressed protein chr7 18799975 18805196 + downstream 9 LOC_Os04g43630 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 25631362 25631850 - downstream 9 LOC_Os01g12760 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr1 7060344 7064249 + downstream 9 LOC_Os09g32988 POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI18 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr9 19692975 19695619 - downstream 9 LOC_Os08g44040 rhamnogalacturonate lyase, putative, expressed gene rhamnogalacturonate lyase, putative, expressed chr8 27721780 27728555 + downstream 9 LOC_Os11g42650 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 25212503 25226242 + downstream 9 LOC_Os07g48244 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed gene ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed chr7 28820833 28823048 - downstream 9 LOC_Os04g58760 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr4 34765356 34766616 + downstream 9 LOC_Os03g50580 expressed protein gene expressed protein chr3 28875568 28875912 + downstream 9 LOC_Os07g43490 hypothetical protein gene hypothetical protein chr7 26029537 26030307 - downstream 9 LOC_Os05g23510 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 13394786 13399174 - downstream 9 LOC_Os03g45150 LTPL93 - Protease inhibitor/seed storage/LTP family protein precursor gene LTPL93 - Protease inhibitor/seed storage/LTP family protein precursor chr3 25492458 25493641 - downstream 9 LOC_Os07g04130 expressed protein gene expressed protein chr7 1752790 1755078 + downstream 9 LOC_Os11g31150 hypothetical protein gene hypothetical protein chr11 17666187 17667082 + downstream 9 LOC_Os07g04370 hypothetical protein gene hypothetical protein chr7 1936868 1938395 + downstream 9 LOC_Os11g36340 lymphoid organ expressed yellow head virus receptor protein, putative, expressed gene lymphoid organ expressed yellow head virus receptor protein, putative, expressed chr11 20947473 20951616 + downstream 9 LOC_Os04g48390 uncharacterized membrane protein, putative, expressed gene uncharacterized membrane protein, putative, expressed chr4 28677456 28683986 + downstream 9 LOC_Os10g40200 aminotransferase domain containing protein, putative, expressed gene aminotransferase domain containing protein, putative, expressed chr10 21448778 21453475 + downstream 9 LOC_Os11g20460 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 11837591 11844210 + downstream 9 LOC_Os08g38910 caffeoyl-CoA O-methyltransferase, putative, expressed gene caffeoyl-CoA O-methyltransferase, putative, expressed chr8 24590231 24594839 - downstream 9 LOC_Os02g37390 hypothetical protein gene hypothetical protein chr2 22580158 22580743 - downstream 9 LOC_Os09g21170 glucosyltransferase, putative gene glucosyltransferase, putative chr9 12776390 12777060 - downstream 9 LOC_Os08g39660 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr8 25106941 25108608 - downstream 9 LOC_Os03g61760 OsSPL6 - SBP-box gene family member, expressed gene OsSPL6 - SBP-box gene family member, expressed chr3 35000871 35008600 - downstream 9 LOC_Os01g50720 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr1 29131114 29132895 - downstream 9 LOC_Os12g29350 ATP binding protein, putative, expressed gene ATP binding protein, putative, expressed chr12 17409566 17419419 - downstream 9 LOC_Os03g47350 hypothetical protein gene hypothetical protein chr3 26775769 26776164 + downstream 9 LOC_Os05g04200 hypothetical protein gene hypothetical protein chr5 1899082 1901111 - downstream 9 LOC_Os09g21550 hypothetical protein gene hypothetical protein chr9 13036226 13037434 - downstream 9 LOC_Os01g03830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 1607984 1616905 + downstream 9 LOC_Os06g44310 tetraspanin family protein, putative, expressed gene tetraspanin family protein, putative, expressed chr6 26751554 26754225 + downstream 9 LOC_Os02g37694 expressed protein gene expressed protein chr2 22737881 22740564 + downstream 9 LOC_Os02g08040 hypothetical protein gene hypothetical protein chr2 4234866 4235081 + downstream 9 LOC_Os04g44510 GEM, putative, expressed gene GEM, putative, expressed chr4 26162184 26163376 - downstream 9 LOC_Os03g24420 hypothetical protein gene hypothetical protein chr3 13909258 13912853 - downstream 9 LOC_Os05g46180 hypothetical protein gene hypothetical protein chr5 26717870 26719162 + downstream 9 LOC_Os01g43450 hypothetical protein gene hypothetical protein chr1 24859207 24859831 + downstream 9 LOC_Os07g13980 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed gene glucose-1-phosphate adenylyltransferase large subunit, putative, expressed chr7 7981506 7988288 - downstream 9 LOC_Os07g29530 hypothetical protein gene hypothetical protein chr7 17333942 17334406 - downstream 9 LOC_Os01g60510 hypothetical protein gene hypothetical protein chr1 34992444 34993240 + downstream 9 LOC_Os01g18730 conserved hypothetical protein gene conserved hypothetical protein chr1 10558863 10559945 - downstream 9 LOC_Os02g47040 conserved hypothetical protein gene conserved hypothetical protein chr2 28700618 28702204 + downstream 9 LOC_Os11g16440 hypothetical protein gene hypothetical protein chr11 9089981 9090836 - downstream 9 LOC_Os02g46360 invertase/pectin methylesterase inhibitor family protein, putative gene invertase/pectin methylesterase inhibitor family protein, putative chr2 28252542 28253105 + downstream 9 LOC_Os04g42250 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr4 24808692 24814461 + downstream 9 LOC_Os01g19110 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 10796071 10797981 + downstream 9 LOC_Os12g34220 OsFBL61 - F-box domain and LRR containing protein, expressed gene OsFBL61 - F-box domain and LRR containing protein, expressed chr12 20715347 20718683 - downstream 9 LOC_Os02g05840 VIL2 protein, putative, expressed gene VIL2 protein, putative, expressed chr2 2876551 2882175 - downstream 9 LOC_Os04g11060 expressed protein gene expressed protein chr4 6007306 6007588 + downstream 9 LOC_Os07g39230 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 23485165 23489489 + downstream 9 LOC_Os05g33730 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr5 19805895 19808759 + downstream 9 LOC_Os07g05650 MAGE-8 antigen-related, putative, expressed gene MAGE-8 antigen-related, putative, expressed chr7 2689659 2692090 + downstream 9 LOC_Os05g31660 expressed protein gene expressed protein chr5 18367492 18368319 - downstream 9 LOC_Os01g27050 flavin-containing monooxygenase family protein, putative, expressed gene flavin-containing monooxygenase family protein, putative, expressed chr1 15084531 15086019 + downstream 9 LOC_Os08g09100 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr8 5267013 5272174 - downstream 9 LOC_Os07g29520 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 17329059 17333428 + downstream 9 LOC_Os01g04280 calmodulin binding protein, putative, expressed gene calmodulin binding protein, putative, expressed chr1 1901736 1904247 + downstream 9 LOC_Os01g65480 dnaJ domain containing protein, expressed gene dnaJ domain containing protein, expressed chr1 38008583 38011235 + downstream 9 LOC_Os03g40130 universal stress protein domain containing protein, putative gene universal stress protein domain containing protein, putative chr3 22297079 22298639 - downstream 9 LOC_Os10g43020 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 23108272 23110384 - downstream 9 LOC_Os04g07600 AGAP002737-PA, putative gene AGAP002737-PA, putative chr4 4035460 4037709 + downstream 9 LOC_Os05g50850 expressed protein gene expressed protein chr5 29101414 29102822 - downstream 9 LOC_Os10g25950 cystathionine gamma-synthase, putative gene cystathionine gamma-synthase, putative chr10 13377992 13379720 - downstream 9 LOC_Os08g10710 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 6306277 6310245 - downstream 9 LOC_Os01g51270 THION44 - Plant thionin family protein precursor, putative gene THION44 - Plant thionin family protein precursor, putative chr1 29474495 29474788 - downstream 9 LOC_Os08g28420 hypothetical protein gene hypothetical protein chr8 17346741 17347902 + downstream 9 LOC_Os05g50820 expressed protein gene expressed protein chr5 29087432 29089627 - downstream 9 LOC_Os01g69174 conserved hypothetical protein gene conserved hypothetical protein chr1 40204069 40205839 + downstream 9 LOC_Os08g08810 hypothetical protein gene hypothetical protein chr8 5106615 5107265 - downstream 9 LOC_Os07g01580 expressed protein gene expressed protein chr7 363312 363828 - downstream 9 LOC_Os01g72460 NADPH quinone oxidoreductase, putative, expressed gene NADPH quinone oxidoreductase, putative, expressed chr1 42017016 42018471 + downstream 9 LOC_Os09g29640 hypothetical protein gene hypothetical protein chr9 18021108 18021347 + downstream 9 LOC_Os04g02150 tRNA methyltransferase, putative, expressed gene tRNA methyltransferase, putative, expressed chr4 714760 721260 - downstream 9 LOC_Os11g29860 hypothetical protein gene hypothetical protein chr11 16870761 16871672 + downstream 9 LOC_Os09g28540 hypothetical protein gene hypothetical protein chr9 17355243 17356377 - downstream 9 LOC_Os02g09180 CUE domain containing protein, expressed gene CUE domain containing protein, expressed chr2 4717662 4720655 + downstream 9 LOC_Os06g10870 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr6 5664966 5666014 - downstream 9 LOC_Os02g34350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 20543527 20548844 - downstream 9 LOC_Os05g32560 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 18977891 18983568 + downstream 9 LOC_Os04g38550 expressed protein gene expressed protein chr4 22723415 22724947 - downstream 9 LOC_Os01g46510 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed gene peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed chr1 26452738 26464912 - downstream 9 LOC_Os05g39490 conserved hypothetical protein gene conserved hypothetical protein chr5 23110566 23114007 - downstream 9 LOC_Os10g39360 aspartic proteinase nepenthesin precursor, putative gene aspartic proteinase nepenthesin precursor, putative chr10 20932429 20933688 + downstream 9 LOC_Os07g05250 hypothetical protein gene hypothetical protein chr7 2366628 2367157 + downstream 9 LOC_Os04g39140 acetyltransferase, GNAT family, putative, expressed gene acetyltransferase, GNAT family, putative, expressed chr4 23090368 23092316 - downstream 9 LOC_Os08g01339 unknown gene unknown chr8 215738 217075 + downstream 9 LOC_Os03g51390 expressed protein gene expressed protein chr3 29394990 29396155 - downstream 9 LOC_Os04g46620 T-complex protein, putative, expressed gene T-complex protein, putative, expressed chr4 27452915 27458756 + downstream 9 LOC_Os07g45990 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 27441276 27446584 + downstream 9 LOC_Os06g02620 chaperone protein dnaJ, putative, expressed gene chaperone protein dnaJ, putative, expressed chr6 926339 931584 - downstream 9 LOC_Os01g07420 hydrolase, alpha/beta fold family protein, putative, expressed gene hydrolase, alpha/beta fold family protein, putative, expressed chr1 3515658 3518175 - downstream 9 LOC_Os12g12920 hypothetical protein gene hypothetical protein chr12 7161607 7162631 + downstream 9 LOC_Os02g25280 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr2 14724820 14729038 - downstream 9 LOC_Os02g06730 hypothetical protein gene hypothetical protein chr2 3386880 3387275 - downstream 9 LOC_Os02g45830 expressed protein gene expressed protein chr2 27907001 27910227 + downstream 9 LOC_Os05g45190 hypothetical protein gene hypothetical protein chr5 26168174 26168810 + downstream 9 LOC_Os01g13920 cysteine protease, putative gene cysteine protease, putative chr1 7795268 7795690 - downstream 9 LOC_Os09g08940 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 4752271 4756768 - downstream 9 LOC_Os12g23200 photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed gene photosystem I reaction center subunit XI, chloroplast precursor, putative, expressed chr12 13112478 13114695 + downstream 9 LOC_Os11g03300 NAC domain transcription factor, putative, expressed gene NAC domain transcription factor, putative, expressed chr11 1232929 1235053 + downstream 9 LOC_Os01g05770 expressed protein gene expressed protein chr1 2752790 2756078 + downstream 9 LOC_Os05g35940 hypothetical protein gene hypothetical protein chr5 21241890 21242192 + downstream 9 LOC_Os08g01514 expressed protein gene expressed protein chr8 316389 317333 - downstream 9 LOC_Os08g34980 hypothetical protein gene hypothetical protein chr8 22026917 22027346 - downstream 9 LOC_Os03g41580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 23121547 23122081 - downstream 9 LOC_Os08g34420 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 21602958 21607361 + downstream 9 LOC_Os10g41220 protein kinase family protein, putative, expressed gene protein kinase family protein, putative, expressed chr10 22065402 22070210 + downstream 9 LOC_Os11g35430 csAtPR5, putative gene csAtPR5, putative chr11 20295809 20297709 - downstream 9 LOC_Os03g60960 cytokinin-N-glucosyltransferase 1, putative, expressed gene cytokinin-N-glucosyltransferase 1, putative, expressed chr3 34629812 34631350 + downstream 9 LOC_Os04g07130 conserved hypothetical protein gene conserved hypothetical protein chr4 3778886 3779943 + downstream 9 LOC_Os01g27090 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 15106318 15109622 - downstream 9 LOC_Os01g43480 AAA-type ATPase family protein, putative, expressed gene AAA-type ATPase family protein, putative, expressed chr1 24893494 24898982 + downstream 9 LOC_Os01g58890 cysteine proteinase inhibitor precursor protein, putative, expressed gene cysteine proteinase inhibitor precursor protein, putative, expressed chr1 34032112 34033896 + downstream 9 LOC_Os07g03710 SCP-like extracellular protein, expressed gene SCP-like extracellular protein, expressed chr7 1511025 1511958 + downstream 9 LOC_Os02g43550 cyclin, putative, expressed gene cyclin, putative, expressed chr2 26269501 26271815 - downstream 9 LOC_Os08g44990 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 28230666 28235605 + downstream 9 LOC_Os05g39970 hypothetical protein gene hypothetical protein chr5 23423839 23424629 + downstream 9 LOC_Os03g12640 hypothetical protein gene hypothetical protein chr3 6719747 6720095 - downstream 9 LOC_Os02g05580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 2708165 2711320 - downstream 9 LOC_Os09g25880 expressed protein gene expressed protein chr9 15520945 15522889 - downstream 9 LOC_Os01g06810 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr1 3229885 3234268 - downstream 9 LOC_Os12g03030 conserved hypothetical protein gene conserved hypothetical protein chr12 1129909 1132442 + downstream 9 LOC_Os03g06170 hsp20/alpha crystallin family protein, putative, expressed gene hsp20/alpha crystallin family protein, putative, expressed chr3 3094748 3095974 - downstream 9 LOC_Os06g36870 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr6 21722223 21724393 - downstream 9 LOC_Os02g28990 hypothetical protein gene hypothetical protein chr2 17157937 17158661 - downstream 9 LOC_Os12g30810 hypothetical protein gene hypothetical protein chr12 18479824 18480471 - downstream 9 LOC_Os03g53110 CorA-like magnesium transporter protein, putative, expressed gene CorA-like magnesium transporter protein, putative, expressed chr3 30446648 30451961 - downstream 9 LOC_Os06g11960 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, putative gene 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, putative chr6 6368183 6369695 - downstream 9 LOC_Os11g37610 hypothetical protein gene hypothetical protein chr11 21733281 21736517 - downstream 9 LOC_Os08g19770 conserved hypothetical protein gene conserved hypothetical protein chr8 11840141 11844364 - downstream 9 LOC_Os04g36550 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 21877158 21880370 - downstream 9 LOC_Os04g29380 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 17284418 17290021 + downstream 9 LOC_Os01g28109 conserved hypothetical protein gene conserved hypothetical protein chr1 15738861 15740558 - downstream 9 LOC_Os08g34480 splicing factor 3B subunit 5, putative, expressed gene splicing factor 3B subunit 5, putative, expressed chr8 21629340 21633614 - downstream 9 LOC_Os12g41560 expressed protein gene expressed protein chr12 25694108 25695763 + downstream 9 LOC_Os04g31570 F-box protein interaction domain containing protein, expressed gene F-box protein interaction domain containing protein, expressed chr4 18703366 18704580 - downstream 9 LOC_Os05g49510 expressed protein gene expressed protein chr5 28326101 28327601 - downstream 9 LOC_Os02g26090 anther-specific proline-rich protein APG, putative gene anther-specific proline-rich protein APG, putative chr2 15316871 15317957 + downstream 9 LOC_Os04g59060 heat shock protein DnaJ, putative, expressed gene heat shock protein DnaJ, putative, expressed chr4 34943467 34947490 - downstream 9 LOC_Os02g17600 galactoside 2-alpha-L-fucosyltransferase, putative gene galactoside 2-alpha-L-fucosyltransferase, putative chr2 10128520 10130708 + downstream 9 LOC_Os02g18640 OsFBX45 - F-box domain containing protein, expressed gene OsFBX45 - F-box domain containing protein, expressed chr2 10861333 10862860 - downstream 9 LOC_Os04g53600 hypothetical protein gene hypothetical protein chr4 31771101 31772442 + downstream 9 LOC_Os11g37260 SEY1, putative, expressed gene SEY1, putative, expressed chr11 21537239 21544391 + downstream 9 LOC_Os12g41740 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 25828413 25829279 - downstream 9 LOC_Os11g08400 expressed protein gene expressed protein chr11 4423867 4427346 - downstream 9 LOC_Os02g42420 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 25512463 25516385 - downstream 9 LOC_Os01g52060 expressed protein gene expressed protein chr1 29936503 29936830 + downstream 9 LOC_Os12g14670 hypothetical protein gene hypothetical protein chr12 8394228 8394895 - downstream 9 LOC_Os03g20080 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr3 11310242 11314680 - downstream 9 LOC_Os09g38630 conserved hypothetical protein gene conserved hypothetical protein chr9 22219929 22221506 - downstream 9 LOC_Os01g18370 hypothetical protein gene hypothetical protein chr1 10315059 10317485 - downstream 9 LOC_Os09g21360 expressed protein gene expressed protein chr9 12891954 12896016 + downstream 9 LOC_Os03g64080 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr3 36200465 36215823 - downstream 9 LOC_Os03g42530 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr3 23656716 23665786 + downstream 9 LOC_Os04g54590 expressed protein gene expressed protein chr4 32274465 32275390 - downstream 9 LOC_Os05g03370 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 1385074 1388650 + downstream 9 LOC_Os08g14364 expressed protein gene expressed protein chr8 8614724 8616850 + downstream 9 LOC_Os09g27120 hypothetical protein gene hypothetical protein chr9 16494698 16495444 - downstream 9 LOC_Os03g11680 ZOS3-05 - C2H2 zinc finger protein, expressed gene ZOS3-05 - C2H2 zinc finger protein, expressed chr3 6097426 6099341 - downstream 9 LOC_Os01g74200 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr1 42980148 42983975 - downstream 9 LOC_Os06g42920 hypothetical protein gene hypothetical protein chr6 25791438 25792052 + downstream 9 LOC_Os01g12990 hypothetical protein gene hypothetical protein chr1 7214369 7214995 - downstream 9 LOC_Os11g36005 expressed protein gene expressed protein chr11 20695133 20696266 + downstream 9 LOC_Os10g05580 hypothetical protein gene hypothetical protein chr10 2772012 2773519 + downstream 9 LOC_Os09g08799 unknown gene unknown chr9 4640262 4640532 - downstream 9 LOC_Os09g22200 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 13426804 13429905 + downstream 9 LOC_Os05g14750 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed gene AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed chr5 8378834 8382353 + downstream 9 LOC_Os11g40110 RWP-RK, putative gene RWP-RK, putative chr11 23459903 23462909 - downstream 9 LOC_Os02g02200 thaumatin, putative gene thaumatin, putative chr2 676466 677742 + downstream 9 LOC_Os10g04010 STE_MEKK_ste11_MAP3K.23 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast gene STE_MEKK_ste11_MAP3K.23 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast chr10 1832181 1833758 - downstream 9 LOC_Os08g03750 conserved hypothetical protein gene conserved hypothetical protein chr8 1780138 1784626 - downstream 9 LOC_Os07g41600 proline-rich protein, putative, expressed gene proline-rich protein, putative, expressed chr7 24933268 24936075 - downstream 9 LOC_Os09g13269 unknown gene unknown chr9 7654260 7654611 + downstream 9 LOC_Os04g49710 hypothetical protein gene hypothetical protein chr4 29466676 29467092 + downstream 9 LOC_Os04g40910 OsFBX146 - F-box domain containing protein, expressed gene OsFBX146 - F-box domain containing protein, expressed chr4 24094446 24098138 - downstream 9 LOC_Os08g07320 expressed protein gene expressed protein chr8 4097516 4100389 - downstream 9 LOC_Os07g41470 expressed protein gene expressed protein chr7 24848532 24848994 - downstream 9 LOC_Os03g47169 Peptidase family C50, putative gene Peptidase family C50, putative chr3 26687033 26688341 - downstream 9 LOC_Os08g25220 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 15318898 15325929 + downstream 9 LOC_Os10g05940 expressed protein gene expressed protein chr10 2994373 2997039 + downstream 9 LOC_Os12g17560 hypothetical protein gene hypothetical protein chr12 10066226 10066525 + downstream 9 LOC_Os12g38540 expressed protein gene expressed protein chr12 23630644 23633067 + downstream 9 LOC_Os04g35720 hypothetical protein gene hypothetical protein chr4 21595560 21596943 - downstream 9 LOC_Os01g72360 expressed protein gene expressed protein chr1 41970942 41971980 + downstream 9 LOC_Os06g22360 hypothetical protein gene hypothetical protein chr6 12982167 12982889 + downstream 9 LOC_Os02g52790 PB1 domain containing protein gene PB1 domain containing protein chr2 32276805 32277407 + downstream 9 LOC_Os09g33570 AGAP009680-PA, putative, expressed gene AGAP009680-PA, putative, expressed chr9 19798895 19802112 + downstream 9 LOC_Os03g59560 hypothetical protein gene hypothetical protein chr3 33893695 33894574 - downstream 9 LOC_Os03g58600 PAZ domain containing protein, putative, expressed gene PAZ domain containing protein, putative, expressed chr3 33364211 33373173 - downstream 9 LOC_Os10g33950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 17991207 17992312 - downstream 9 LOC_Os11g06510 hypothetical protein gene hypothetical protein chr11 3138276 3139388 + downstream 9 LOC_Os11g11710 expressed protein gene expressed protein chr11 6505745 6506968 - downstream 9 LOC_Os12g38130 conserved hypothetical protein gene conserved hypothetical protein chr12 23384971 23385219 + downstream 9 LOC_Os04g55960 NADPH reductase, putative, expressed gene NADPH reductase, putative, expressed chr4 33144681 33150755 + downstream 9 LOC_Os11g15220 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 8582490 8585583 + downstream 9 LOC_Os09g24550 hypothetical protein gene hypothetical protein chr9 14615985 14616249 + downstream 9 LOC_Os01g39680 expressed protein gene expressed protein chr1 22378014 22382004 + downstream 9 LOC_Os07g48000 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr7 28661840 28667204 - downstream 9 LOC_Os01g18800 CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_KIN1/SNF1/Nim1_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr1 10621771 10626528 + downstream 9 LOC_Os07g27580 HAD superfamily phosphatase, putative gene HAD superfamily phosphatase, putative chr7 16107680 16108438 + downstream 9 LOC_Os03g28960 DNA-directed RNA polymerase subunit, putative, expressed gene DNA-directed RNA polymerase subunit, putative, expressed chr3 16419681 16438241 + downstream 9 LOC_Os02g44280 zinc finger protein, putative gene zinc finger protein, putative chr2 26784122 26785006 - downstream 9 LOC_Os05g09724 HAD superfamily phosphatase, putative, expressed gene HAD superfamily phosphatase, putative, expressed chr5 5508334 5510228 - downstream 9 LOC_Os07g37620 fiber expressed protein, putative, expressed gene fiber expressed protein, putative, expressed chr7 22542283 22543962 - downstream 9 LOC_Os06g48060 ABC transporter, ATP-binding protein, putative, expressed gene ABC transporter, ATP-binding protein, putative, expressed chr6 29071352 29075033 - downstream 9 LOC_Os02g45410 hypothetical protein gene hypothetical protein chr2 27609887 27610159 + downstream 9 LOC_Os08g15760 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 9552425 9552940 - downstream 9 LOC_Os06g46070 hypothetical protein gene hypothetical protein chr6 27933526 27934660 + downstream 9 LOC_Os02g51990 hypothetical protein gene hypothetical protein chr2 31827901 31828101 + downstream 9 LOC_Os06g02210 bark storage protein A precursor, putative, expressed gene bark storage protein A precursor, putative, expressed chr6 677856 681798 - downstream 9 LOC_Os12g40610 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 25100961 25104276 - downstream 9 LOC_Os03g41570 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr3 23117532 23120944 + downstream 9 LOC_Os05g07260 phosphatidylinositolglycan-related, putative, expressed gene phosphatidylinositolglycan-related, putative, expressed chr5 3839659 3843146 + downstream 9 LOC_Os08g37030 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr8 23405708 23406949 - downstream 9 LOC_Os07g41000 hypothetical protein gene hypothetical protein chr7 24531149 24531352 - downstream 9 LOC_Os05g12790 hypothetical protein gene hypothetical protein chr5 7339263 7339649 - downstream 9 LOC_Os01g26110 hypothetical protein gene hypothetical protein chr1 14791087 14791613 + downstream 9 LOC_Os03g43430 mttA/Hcf106 family protein, putative, expressed gene mttA/Hcf106 family protein, putative, expressed chr3 24218100 24220350 - downstream 9 LOC_Os05g09050 MLO domain containing protein, putative gene MLO domain containing protein, putative chr5 5025069 5029130 - downstream 9 LOC_Os04g08400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 4493393 4499345 + downstream 9 LOC_Os02g03110 CDP-alcohol phosphatidyltransferase, putative, expressed gene CDP-alcohol phosphatidyltransferase, putative, expressed chr2 1231020 1234484 - downstream 9 LOC_Os11g33420 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 19314426 19316193 - downstream 9 LOC_Os11g17650 hypothetical protein gene hypothetical protein chr11 9845130 9846686 - downstream 9 LOC_Os05g06510 4Fe-4S binding domain containing protein, expressed gene 4Fe-4S binding domain containing protein, expressed chr5 3348786 3352825 - downstream 9 LOC_Os10g34750 LIG1 - Putative DNA ligase I, expressed gene LIG1 - Putative DNA ligase I, expressed chr10 18481509 18487884 - downstream 9 LOC_Os10g28070 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 14506585 14507229 + downstream 9 LOC_Os10g01910 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 575157 580120 - downstream 9 LOC_Os08g30569 unknown gene unknown chr8 18828625 18828929 + downstream 9 LOC_Os04g48330 ethylene-responsive transcription factor ERF027, putative gene ethylene-responsive transcription factor ERF027, putative chr4 28628898 28629368 + downstream 9 LOC_Os01g02180 expressed protein gene expressed protein chr1 639588 643269 - downstream 9 LOC_Os03g53440 hypothetical protein gene hypothetical protein chr3 30652754 30653542 - downstream 9 LOC_Os01g46950 aldose 1-epimerase, putative, expressed gene aldose 1-epimerase, putative, expressed chr1 26790710 26794895 - downstream 9 LOC_Os09g13340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 7692090 7695244 - downstream 9 LOC_Os03g62660 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr3 35455012 35459259 + downstream 9 LOC_Os11g10830 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 5965663 5968590 - downstream 9 LOC_Os07g40210 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr7 24110362 24113827 - downstream 9 LOC_Os09g13840 hypothetical protein gene hypothetical protein chr9 8127596 8130319 - downstream 9 LOC_Os03g42950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed gene retrotransposon protein, putative, Ty3-gypsy subclass, expressed chr3 23945215 23952651 + downstream 9 LOC_Os11g38270 hypothetical protein gene hypothetical protein chr11 22197328 22198866 - downstream 9 LOC_Os02g34390 conserved hypothetical protein gene conserved hypothetical protein chr2 20570095 20571876 - downstream 9 LOC_Os05g34120 hypothetical protein gene hypothetical protein chr5 20101808 20104116 - downstream 9 LOC_Os10g05130 expressed protein gene expressed protein chr10 2505978 2507361 + downstream 9 LOC_Os12g41010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 25343985 25347266 - downstream 9 LOC_Os04g52880 expressed protein gene expressed protein chr4 31307645 31309062 + downstream 9 LOC_Os12g42270 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 26189112 26195160 - downstream 9 LOC_Os12g01390 clathrin heavy chain, putative, expressed gene clathrin heavy chain, putative, expressed chr12 248725 258877 + downstream 9 LOC_Os09g23630 hypothetical protein gene hypothetical protein chr9 14038994 14039215 - downstream 9 LOC_Os06g22380 expressed protein gene expressed protein chr6 12989975 12999962 - downstream 9 LOC_Os01g47700 expressed protein gene expressed protein chr1 27280213 27280946 + downstream 9 LOC_Os06g17130 hypothetical protein gene hypothetical protein chr6 9933712 9933953 + downstream 9 LOC_Os09g17550 hypothetical protein gene hypothetical protein chr9 10737215 10737792 - downstream 9 LOC_Os07g06780 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 3308108 3311812 - downstream 9 LOC_Os06g44220 OsRCI2-9 - Putative low temperature and salt responsive protein gene OsRCI2-9 - Putative low temperature and salt responsive protein chr6 26675856 26676198 + downstream 9 LOC_Os04g29750 hypothetical protein gene hypothetical protein chr4 17557683 17558762 + downstream 9 LOC_Os12g43710 hypothetical protein gene hypothetical protein chr12 27117322 27118698 - downstream 9 LOC_Os05g14000 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 7794200 7797900 + downstream 9 LOC_Os09g27640 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 16798951 16800494 - downstream 9 LOC_Os03g12960 hypothetical protein gene hypothetical protein chr3 7002976 7003229 - downstream 9 LOC_Os01g50430 hypothetical protein gene hypothetical protein chr1 28951137 28952759 + downstream 9 LOC_Os09g16750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 10245898 10246495 - downstream 9 LOC_Os08g32300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 20006669 20009510 - downstream 9 LOC_Os02g40950 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 24806724 24809466 - downstream 9 LOC_Os02g21820 hypothetical protein gene hypothetical protein chr2 12973544 12974522 - downstream 9 LOC_Os04g10680 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr4 5797494 5806590 + downstream 9 LOC_Os02g39210 conserved hypothetical protein gene conserved hypothetical protein chr2 23677452 23678525 + downstream 9 LOC_Os02g03270 AT hook motif domain containing protein, expressed gene AT hook motif domain containing protein, expressed chr2 1313910 1319031 + downstream 9 LOC_Os11g17560 hypothetical protein gene hypothetical protein chr11 9774801 9775361 - downstream 9 LOC_Os11g37580 hypothetical protein gene hypothetical protein chr11 21720335 21721555 - downstream 9 LOC_Os01g40180 hypothetical protein gene hypothetical protein chr1 22665072 22665968 - downstream 9 LOC_Os04g55740 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr4 32994520 32996307 - downstream 9 LOC_Os07g32480 mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed gene mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed chr7 19327733 19330915 + downstream 9 LOC_Os07g42460 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 25417281 25420415 - downstream 9 LOC_Os02g36660 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 22127207 22127503 - downstream 9 LOC_Os07g36890 OsFBX253 - F-box domain containing protein gene OsFBX253 - F-box domain containing protein chr7 22089931 22092344 - downstream 9 LOC_Os11g42290 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr11 25000396 25001970 - downstream 9 LOC_Os07g18580 hypothetical protein gene hypothetical protein chr7 10987761 10988538 - downstream 9 LOC_Os07g07430 CAF1 family ribonuclease containing protein, putative gene CAF1 family ribonuclease containing protein, putative chr7 3705808 3706917 - downstream 9 LOC_Os10g01490 hypothetical protein gene hypothetical protein chr10 315728 317305 + downstream 9 LOC_Os04g02375 hypothetical protein gene hypothetical protein chr4 853785 854691 + downstream 9 LOC_Os02g13880 expressed protein gene expressed protein chr2 7524306 7524563 - downstream 9 LOC_Os06g10700 conserved hypothetical protein gene conserved hypothetical protein chr6 5585612 5585902 - downstream 9 LOC_Os01g47780 fasciclin domain containing protein, expressed gene fasciclin domain containing protein, expressed chr1 27339855 27340906 - downstream 9 LOC_Os02g18700 ABC transporter family protein, putative gene ABC transporter family protein, putative chr2 10908429 10916388 - downstream 9 LOC_Os01g49230 limonoid UDP-glucosyltransferase, putative, expressed gene limonoid UDP-glucosyltransferase, putative, expressed chr1 28302226 28303795 + downstream 9 LOC_Os07g45250 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 27000617 27003320 + downstream 9 LOC_Os10g33770 importin-beta N-terminal domain containing protein gene importin-beta N-terminal domain containing protein chr10 17786982 17801650 + downstream 9 LOC_Os05g38600 ZOS5-09 - C2H2 zinc finger protein gene ZOS5-09 - C2H2 zinc finger protein chr5 22575937 22576461 - downstream 9 LOC_Os11g44100 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 26166670 26168880 + downstream 9 LOC_Os10g09640 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr10 5231777 5232616 + downstream 9 LOC_Os10g34240 hypothetical protein gene hypothetical protein chr10 18205332 18206120 - downstream 9 LOC_Os06g21890 basic proline-rich protein precursor, putative, expressed gene basic proline-rich protein precursor, putative, expressed chr6 12650280 12652028 - downstream 9 LOC_Os08g04480 appr-1-p processing enzyme family protein, putative gene appr-1-p processing enzyme family protein, putative chr8 2202450 2203308 - downstream 9 LOC_Os02g31190 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 18672422 18678375 - downstream 9 LOC_Os08g07050 pentatricopeptide, putative gene pentatricopeptide, putative chr8 3944934 3945488 - downstream 9 LOC_Os07g47440 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 28364093 28365838 + downstream 9 LOC_Os12g14650 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 8372760 8376409 + downstream 9 LOC_Os05g37170 transcription factor, putative, expressed gene transcription factor, putative, expressed chr5 21653158 21662007 + downstream 9 LOC_Os08g08479 unknown gene unknown chr8 4890147 4890435 - downstream 9 LOC_Os06g07400 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr6 3557159 3558923 + downstream 9 LOC_Os06g34180 hypothetical protein gene hypothetical protein chr6 19903209 19903553 - downstream 9 LOC_Os06g16640 carboxyl-terminal peptidase, putative, expressed gene carboxyl-terminal peptidase, putative, expressed chr6 9563125 9565968 - downstream 9 LOC_Os06g02690 hypothetical protein gene hypothetical protein chr6 962221 962906 - downstream 9 LOC_Os07g24860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 14134815 14137552 + downstream 9 LOC_Os05g49270 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr5 28202236 28206848 + downstream 9 LOC_Os03g10250 expressed protein gene expressed protein chr3 5217132 5218771 + downstream 9 LOC_Os08g16255 CPSF6 protein, putative, expressed gene CPSF6 protein, putative, expressed chr8 9916775 9920125 - downstream 9 LOC_Os02g21830 hypothetical protein gene hypothetical protein chr2 12978144 12978401 - downstream 9 LOC_Os07g02030 thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed gene thiamine pyrophosphate enzyme, N-terminal TPP binding domain containing protein, expressed chr7 611503 618412 + downstream 9 LOC_Os07g03900 lectin-like receptor kinase, putative gene lectin-like receptor kinase, putative chr7 1630224 1632254 - downstream 9 LOC_Os11g31680 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 18059892 18075080 - downstream 9 LOC_Os06g39610 hypothetical protein gene hypothetical protein chr6 23513153 23513948 - downstream 9 LOC_Os06g02949 unknown gene unknown chr6 1087381 1088185 + downstream 9 LOC_Os06g13340 hypothetical protein gene hypothetical protein chr6 7337077 7338728 + downstream 9 LOC_Os05g02170 hypothetical protein gene hypothetical protein chr5 679902 680198 - downstream 9 LOC_Os09g34880 basic region leucine zipper domain containing protein, expressed gene basic region leucine zipper domain containing protein, expressed chr9 20326086 20330056 + downstream 9 LOC_Os09g23570 inactive receptor kinase At2g26730 precursor, putative, expressed gene inactive receptor kinase At2g26730 precursor, putative, expressed chr9 14006857 14009159 - downstream 9 LOC_Os03g52560 glycosyl hydrolases, putative, expressed gene glycosyl hydrolases, putative, expressed chr3 30142386 30144308 + downstream 9 LOC_Os01g27590 transposon protein, putative, Pong sub-class, expressed gene transposon protein, putative, Pong sub-class, expressed chr1 15388706 15391047 - downstream 9 LOC_Os03g57990 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr3 33020879 33022051 + downstream 9 LOC_Os01g61310 DUF640 domain containing protein, putative gene DUF640 domain containing protein, putative chr1 35472652 35473290 - downstream 9 LOC_Os05g39910 hypothetical protein gene hypothetical protein chr5 23388621 23390028 + downstream 9 LOC_Os06g50970 hypothetical protein gene hypothetical protein chr6 30847413 30849266 + downstream 9 LOC_Os12g14090 hypothetical protein gene hypothetical protein chr12 7992805 7994128 + downstream 9 LOC_Os07g47520 conserved hypothetical protein gene conserved hypothetical protein chr7 28416749 28417749 + downstream 9 LOC_Os11g08850 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 4685094 4686462 + downstream 9 LOC_Os04g39050 ZOS4-07 - C2H2 zinc finger protein, expressed gene ZOS4-07 - C2H2 zinc finger protein, expressed chr4 23005797 23007088 + downstream 9 LOC_Os02g44750 hypothetical protein gene hypothetical protein chr2 27106140 27108049 - downstream 9 LOC_Os10g31630 expressed protein gene expressed protein chr10 16504120 16506516 - downstream 9 LOC_Os10g29340 speckle-type POZ protein-like, putative gene speckle-type POZ protein-like, putative chr10 15188318 15189322 + downstream 9 LOC_Os06g01590 lactate/malate dehydrogenase, putative, expressed gene lactate/malate dehydrogenase, putative, expressed chr6 345985 347516 - downstream 9 LOC_Os05g31900 hypothetical protein gene hypothetical protein chr5 18506445 18507314 - downstream 9 LOC_Os12g10380 GRound-Like protein, putative gene GRound-Like protein, putative chr12 5496679 5497035 + downstream 9 LOC_Os08g01260 VQ domain containing protein, putative gene VQ domain containing protein, putative chr8 166960 167583 + downstream 9 LOC_Os05g48510 phenylalanyl-tRNA synthetase beta chain, putative, expressed gene phenylalanyl-tRNA synthetase beta chain, putative, expressed chr5 27738304 27745389 + downstream 9 LOC_Os12g02880 E2F-related protein, putative, expressed gene E2F-related protein, putative, expressed chr12 1051828 1052879 + downstream 9 LOC_Os09g21540 hypothetical protein gene hypothetical protein chr9 13031510 13034727 + downstream 9 LOC_Os10g25850 nuclear transcription factor Y subunit, putative, expressed gene nuclear transcription factor Y subunit, putative, expressed chr10 13321675 13331032 + downstream 9 LOC_Os04g56140 expressed protein gene expressed protein chr4 33243966 33251128 + downstream 9 LOC_Os03g44159 hypothetical protein gene hypothetical protein chr3 24820877 24822037 + downstream 9 LOC_Os10g05740 hypothetical protein gene hypothetical protein chr10 2893375 2895008 - downstream 9 LOC_Os11g12390 conserved hypothetical protein gene conserved hypothetical protein chr11 6916473 6916865 + downstream 9 LOC_Os01g57250 expressed protein gene expressed protein chr1 33081033 33082368 + downstream 9 LOC_Os12g44040 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr12 27279471 27282732 + downstream 9 LOC_Os03g03750 hypothetical protein gene hypothetical protein chr3 1670023 1670431 - downstream 9 LOC_Os11g31110 expressed protein gene expressed protein chr11 17640814 17647049 - downstream 9 LOC_Os04g49220 mitochondrial import inner membrane translocase subunit Tim, putative gene mitochondrial import inner membrane translocase subunit Tim, putative chr4 29163646 29168989 - downstream 9 LOC_Os01g49154 expressed protein gene expressed protein chr1 28245563 28246977 + downstream 9 LOC_Os01g12140 conserved hypothetical protein gene conserved hypothetical protein chr1 6614403 6614768 + downstream 9 LOC_Os11g03484 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr11 1334134 1343997 - downstream 9 LOC_Os08g35490 ctr copper transporter family protein, putative gene ctr copper transporter family protein, putative chr8 22359625 22360155 + downstream 9 LOC_Os01g55750 TCP family transcription factor, putative, expressed gene TCP family transcription factor, putative, expressed chr1 32105788 32108701 - downstream 9 LOC_Os04g45500 hypothetical protein gene hypothetical protein chr4 26738139 26738879 + downstream 9 LOC_Os03g51680 fanconi anemia L, putative, expressed gene fanconi anemia L, putative, expressed chr3 29586006 29588839 - downstream 9 LOC_Os09g28410 hypothetical protein gene hypothetical protein chr9 17292832 17294528 + downstream 9 LOC_Os02g44330 rho guanine nucleotide exchange factor, putative, expressed gene rho guanine nucleotide exchange factor, putative, expressed chr2 26814534 26817530 + downstream 9 LOC_Os02g16830 glutelin, putative, expressed gene glutelin, putative, expressed chr2 9586005 9588014 - downstream 9 LOC_Os06g17270 hypothetical protein gene hypothetical protein chr6 9999558 9999839 - downstream 9 LOC_Os11g47960 hypothetical protein gene hypothetical protein chr11 28409305 28409757 + downstream 9 LOC_Os07g38680 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 23224839 23225162 - downstream 9 LOC_Os02g32070 hypothetical protein gene hypothetical protein chr2 18948609 18948815 + downstream 9 LOC_Os07g09250 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 4849267 4849911 - downstream 9 LOC_Os01g09120 Twin LOV 1, putative, expressed gene Twin LOV 1, putative, expressed chr1 4580148 4583690 - downstream 9 LOC_Os05g14760 hypothetical protein gene hypothetical protein chr5 8382980 8383330 - downstream 9 LOC_Os03g13680 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 7396783 7399813 - downstream 9 LOC_Os12g09780 hypothetical protein gene hypothetical protein chr12 5180761 5182319 - downstream 9 LOC_Os06g32980 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr6 19198607 19199722 - downstream 9 LOC_Os10g31070 hypothetical protein gene hypothetical protein chr10 16188280 16188843 - downstream 9 LOC_Os05g42280 expressed protein gene expressed protein chr5 24666899 24670366 - downstream 9 LOC_Os12g44190 ATPase 3, putative, expressed gene ATPase 3, putative, expressed chr12 27378612 27380780 - downstream 9 LOC_Os01g67400 hypothetical protein gene hypothetical protein chr1 39139401 39139719 - downstream 9 LOC_Os01g72900 abscisic stress-ripening, putative, expressed gene abscisic stress-ripening, putative, expressed chr1 42280228 42280929 - downstream 9 LOC_Os03g26610 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 15202703 15205709 + downstream 9 LOC_Os04g42290 methyladenine glycosylase, putative, expressed gene methyladenine glycosylase, putative, expressed chr4 24832075 24835417 + downstream 9 LOC_Os03g06760 exocyst complex component 6, putative, expressed gene exocyst complex component 6, putative, expressed chr3 3434020 3438540 + downstream 9 LOC_Os09g19390 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed gene senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed chr9 11605482 11609729 - downstream 9 LOC_Os07g25370 myb-like DNA-binding domain containing protein gene myb-like DNA-binding domain containing protein chr7 14501061 14501639 - downstream 9 LOC_Os08g24830 OsFBDUF44 - F-box and DUF domain containing protein gene OsFBDUF44 - F-box and DUF domain containing protein chr8 15017190 15018446 - downstream 9 LOC_Os11g41280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 24277100 24283125 - downstream 9 LOC_Os06g38700 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr6 22978951 22981926 + downstream 9 LOC_Os01g70020 DEK C terminal domain containing protein, expressed gene DEK C terminal domain containing protein, expressed chr1 40500104 40506747 + downstream 9 LOC_Os08g26880 bZIP transcription factor domain containing protein, expressed gene bZIP transcription factor domain containing protein, expressed chr8 16369356 16371656 + downstream 9 LOC_Os10g04980 OsFBX365 - F-box domain containing protein, expressed gene OsFBX365 - F-box domain containing protein, expressed chr10 2421032 2425544 - downstream 9 LOC_Os01g04840 vacuolar protein sorting-associating protein 4B, putative gene vacuolar protein sorting-associating protein 4B, putative chr1 2225000 2228526 - downstream 9 LOC_Os05g14120 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 7889360 7892367 - downstream 9 LOC_Os07g09100 conserved hypothetical protein gene conserved hypothetical protein chr7 4754850 4756073 + downstream 9 LOC_Os01g37100 RWP-RK domain-containing protein, putative, expressed gene RWP-RK domain-containing protein, putative, expressed chr1 20704705 20706363 - downstream 9 LOC_Os03g63600 tetraspanin family protein, putative gene tetraspanin family protein, putative chr3 35909276 35910805 + downstream 9 LOC_Os08g36100 hypothetical protein gene hypothetical protein chr8 22744651 22748103 + downstream 9 LOC_Os03g25540 conserved hypothetical protein gene conserved hypothetical protein chr3 14581402 14581680 + downstream 9 LOC_Os09g37530 hypothetical protein gene hypothetical protein chr9 21636693 21637462 - downstream 9 LOC_Os11g05570 RNASEH2A - Putative ribonuclease H2 large subunit, expressed gene RNASEH2A - Putative ribonuclease H2 large subunit, expressed chr11 2525648 2528599 + downstream 9 LOC_Os04g50080 hypothetical protein gene hypothetical protein chr4 29681371 29682024 + downstream 9 LOC_Os07g41570 expressed protein gene expressed protein chr7 24909356 24915539 + downstream 9 LOC_Os07g11010 protein Kinase-associated protein phosphatase, putative, expressed gene protein Kinase-associated protein phosphatase, putative, expressed chr7 6050252 6059516 + downstream 9 LOC_Os06g45870 expressed protein gene expressed protein chr6 27755426 27759085 - downstream 9 LOC_Os04g44210 expressed protein gene expressed protein chr4 25983483 25988779 - downstream 9 LOC_Os11g47439 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 28079282 28079515 + downstream 9 LOC_Os05g28760 GCRP1 - Glycine and cysteine rich family protein precursor, putative gene GCRP1 - Glycine and cysteine rich family protein precursor, putative chr5 16803043 16803378 + downstream 9 LOC_Os05g16200 blight resistance protein T118, putative gene blight resistance protein T118, putative chr5 9151274 9154908 - downstream 9 LOC_Os04g27750 expressed protein gene expressed protein chr4 16230183 16230745 + downstream 9 LOC_Os01g72710 expressed protein gene expressed protein chr1 42189240 42193026 + downstream 9 LOC_Os05g34690 hypothetical protein gene hypothetical protein chr5 20521464 20522882 - downstream 9 LOC_Os05g33950 hypothetical protein gene hypothetical protein chr5 19979975 19981422 - downstream 9 LOC_Os01g49000 katanin p60 ATPase-containing subunit, putative, expressed gene katanin p60 ATPase-containing subunit, putative, expressed chr1 28135323 28142316 + downstream 9 LOC_Os05g46810 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 27048251 27052150 + downstream 9 LOC_Os03g25980 polypyrimidine tract-binding protein, putative, expressed gene polypyrimidine tract-binding protein, putative, expressed chr3 14877399 14882422 + downstream 9 LOC_Os09g39000 OsFBX341 - F-box domain containing protein gene OsFBX341 - F-box domain containing protein chr9 22390829 22392247 + downstream 9 LOC_Os11g19330 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 11068059 11071328 + downstream 9 LOC_Os02g45180 ORM1, putative, expressed gene ORM1, putative, expressed chr2 27417006 27421721 + downstream 9 LOC_Os07g25020 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 14259924 14261639 + downstream 9 LOC_Os10g35040 receptor kinase like protein, putative gene receptor kinase like protein, putative chr10 18626150 18628646 + downstream 9 LOC_Os05g46110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 26676755 26680081 - downstream 9 LOC_Os01g36984 hypothetical protein gene hypothetical protein chr1 20633250 20638506 - downstream 9 LOC_Os04g47440 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 27959819 27960387 + downstream 9 LOC_Os11g35530 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 20363020 20365433 + downstream 9 LOC_Os02g48750 hypothetical protein gene hypothetical protein chr2 29838720 29839364 + downstream 9 LOC_Os11g23760 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 12972218 12978754 + downstream 9 LOC_Os02g57550 ZOS2-18 - C2H2 zinc finger protein gene ZOS2-18 - C2H2 zinc finger protein chr2 35255389 35255976 - downstream 9 LOC_Os11g34020 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr11 19408850 19410301 - downstream 9 LOC_Os02g32420 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr2 19160666 19162401 + downstream 9 LOC_Os04g30630 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 18120473 18125144 - downstream 9 LOC_Os02g57690 kelch repeat protein, putative, expressed gene kelch repeat protein, putative, expressed chr2 35319742 35326051 - downstream 9 LOC_Os02g56740 translation initiation factor eIF-2B subunit epsilon, putative, expressed gene translation initiation factor eIF-2B subunit epsilon, putative, expressed chr2 34778287 34787518 + downstream 9 LOC_Os05g39120 expressed protein gene expressed protein chr5 22874747 22878129 + downstream 9 LOC_Os07g12000 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 6649980 6653738 - downstream 9 LOC_Os01g33615 expressed protein gene expressed protein chr1 18502141 18502709 - downstream 9 LOC_Os05g28430 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 16585148 16588241 + downstream 9 LOC_Os11g07410 hypothetical protein gene hypothetical protein chr11 3728371 3728615 - downstream 9 LOC_Os02g01050 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 27436 31791 + downstream 9 LOC_Os03g27350 cysteine protease ATG4, putative, expressed gene cysteine protease ATG4, putative, expressed chr3 15660498 15664317 + downstream 9 LOC_Os09g08980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 4773980 4774378 - downstream 9 LOC_Os09g11110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 6159766 6162707 - downstream 9 LOC_Os09g38600 expressed protein gene expressed protein chr9 22201597 22203687 + downstream 9 LOC_Os05g48110 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 27511913 27514124 + downstream 9 LOC_Os01g23440 expressed protein gene expressed protein chr1 13169691 13173103 - downstream 9 LOC_Os06g11650 phosphate-induced protein 1 conserved region domain containing protein, expressed gene phosphate-induced protein 1 conserved region domain containing protein, expressed chr6 6176854 6178164 - downstream 9 LOC_Os05g48720 transposon protein, putative, Mariner sub-class gene transposon protein, putative, Mariner sub-class chr5 27861504 27864216 - downstream 9 LOC_Os05g34130 expressed protein gene expressed protein chr5 20115696 20117625 - downstream 9 LOC_Os03g60620 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr3 34439193 34443814 + downstream 9 LOC_Os05g32390 FZL, putative, expressed gene FZL, putative, expressed chr5 18829465 18838346 + downstream 9 LOC_Os04g27910 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 16311207 16314427 - downstream 9 LOC_Os08g32280 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 19998309 19999747 - downstream 9 LOC_Os05g32780 hypothetical protein gene hypothetical protein chr5 19141172 19142473 + downstream 9 LOC_Os04g35200 expressed protein gene expressed protein chr4 21213359 21215645 - downstream 9 LOC_Os08g40370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 25555415 25560595 - downstream 9 LOC_Os07g06680 fasciclin domain containing protein, expressed gene fasciclin domain containing protein, expressed chr7 3257238 3261152 + downstream 9 LOC_Os07g03449 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 1382447 1383204 - downstream 9 LOC_Os08g13970 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr8 8374651 8382497 - downstream 9 LOC_Os01g12880 VHS and GAT domain containing protein, expressed gene VHS and GAT domain containing protein, expressed chr1 7128149 7136330 + downstream 9 LOC_Os12g25140 hypothetical protein gene hypothetical protein chr12 14432825 14433163 - downstream 9 LOC_Os05g02190 expressed protein gene expressed protein chr5 687860 690396 - downstream 9 LOC_Os10g21170 hypothetical protein gene hypothetical protein chr10 10712501 10712893 - downstream 9 LOC_Os11g20590 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 11928446 11931750 - downstream 9 LOC_Os05g12250 hypothetical protein gene hypothetical protein chr5 7012626 7013298 - downstream 9 LOC_Os09g32140 hypothetical protein gene hypothetical protein chr9 19184484 19185026 - downstream 9 LOC_Os04g04240 sterol 3-beta-glucosyltransferase, putative gene sterol 3-beta-glucosyltransferase, putative chr4 1970276 1977412 - downstream 9 LOC_Os01g59460 hypothetical protein gene hypothetical protein chr1 34396261 34396548 + downstream 9 LOC_Os07g18540 ribosomal RNA apurinic site specific lyase, putative gene ribosomal RNA apurinic site specific lyase, putative chr7 10969467 10971897 - downstream 9 LOC_Os07g43150 hypothetical protein gene hypothetical protein chr7 25849866 25850720 - downstream 9 LOC_Os01g03880 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 1646158 1646415 - downstream 9 LOC_Os05g51850 AT hook-containing DNA-binding protein, putative, expressed gene AT hook-containing DNA-binding protein, putative, expressed chr5 29696455 29698793 - downstream 9 LOC_Os05g09510 hypothetical protein gene hypothetical protein chr5 5351948 5353030 - downstream 9 LOC_Os09g08254 hypothetical protein gene hypothetical protein chr9 4272509 4274876 + downstream 9 LOC_Os01g66470 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 38587884 38590709 - downstream 9 LOC_Os05g47840 IPP transferase, putative, expressed gene IPP transferase, putative, expressed chr5 27360344 27362151 - downstream 9 LOC_Os11g28920 hypothetical protein gene hypothetical protein chr11 16271821 16272099 - downstream 9 LOC_Os07g15010 hypothetical protein gene hypothetical protein chr7 8602912 8604270 + downstream 9 LOC_Os01g12090 ribosomal protein S6 family protein, putative gene ribosomal protein S6 family protein, putative chr1 6582822 6585889 + downstream 9 LOC_Os12g06010 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr12 2767413 2776018 + downstream 9 LOC_Os03g17200 plant-specific domain TIGR01589 family protein gene plant-specific domain TIGR01589 family protein chr3 9574478 9575268 + downstream 9 LOC_Os08g33600 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 20979983 20981587 + downstream 9 LOC_Os04g28150 hypothetical protein gene hypothetical protein chr4 16452926 16455617 + downstream 9 LOC_Os09g22460 OsFBX328 - F-box domain containing protein gene OsFBX328 - F-box domain containing protein chr9 13562564 13563715 - downstream 9 LOC_Os02g51790 ribosomal protein L29, putative, expressed gene ribosomal protein L29, putative, expressed chr2 31713852 31716630 + downstream 9 LOC_Os04g52710 imidazoleglycerol-phosphate dehydratase, putative, expressed gene imidazoleglycerol-phosphate dehydratase, putative, expressed chr4 31204563 31208893 + downstream 9 LOC_Os02g01140 GDSL-like lipase/acylhydrolase, putative, expressed gene GDSL-like lipase/acylhydrolase, putative, expressed chr2 78170 79579 + downstream 9 LOC_Os08g01500 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 306168 306458 - downstream 9 LOC_Os04g34020 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 20434585 20434908 - downstream 9 LOC_Os08g12510 hypothetical protein gene hypothetical protein chr8 7407122 7408381 - downstream 9 LOC_Os11g30030 esterase PIR7A, putative gene esterase PIR7A, putative chr11 17004461 17005124 + downstream 9 LOC_Os06g07630 26S protease regulatory subunit 6A, putative, expressed gene 26S protease regulatory subunit 6A, putative, expressed chr6 3688673 3693343 + downstream 9 LOC_Os08g02260 conserved hypothetical protein gene conserved hypothetical protein chr8 797182 797745 - downstream 9 LOC_Os03g18050 OsSAUR13 - Auxin-responsive SAUR gene family member gene OsSAUR13 - Auxin-responsive SAUR gene family member chr3 10056594 10057217 + downstream 9 LOC_Os03g36640 hypothetical protein gene hypothetical protein chr3 20319941 20321860 + downstream 9 LOC_Os12g14120 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 8009233 8012987 - downstream 9 LOC_Os12g09200 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 4801307 4803874 + downstream 9 LOC_Os09g29140 hypothetical protein gene hypothetical protein chr9 17710052 17711694 - downstream 9 LOC_Os05g05346 expressed protein gene expressed protein chr5 2632311 2635210 + downstream 9 LOC_Os01g49430 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr1 28424770 28426517 - downstream 9 LOC_Os05g04480 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 2067540 2070874 - downstream 9 LOC_Os01g60070 conserved hypothetical protein gene conserved hypothetical protein chr1 34744575 34744784 + downstream 9 LOC_Os09g16230 hypothetical protein gene hypothetical protein chr9 9908175 9908868 - downstream 9 LOC_Os02g17190 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr2 9848197 9852415 + downstream 9 LOC_Os05g39940 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr5 23410678 23411121 - downstream 9 LOC_Os08g08950 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 5200020 5205082 + downstream 9 LOC_Os11g45710 Os11bglu36 SFR2 homologue, expressed gene Os11bglu36 SFR2 homologue, expressed chr11 27177089 27183618 - downstream 9 LOC_Os06g47750 phytosulfokine receptor precursor, putative, expressed gene phytosulfokine receptor precursor, putative, expressed chr6 28897443 28900945 - downstream 9 LOC_Os03g58290 indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed gene indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed chr3 33200401 33203270 - downstream 9 LOC_Os05g03160 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr5 1266623 1267060 - downstream 9 LOC_Os11g42980 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 25439015 25442741 + downstream 9 LOC_Os06g46020 hypothetical protein gene hypothetical protein chr6 27883600 27883983 - downstream 9 LOC_Os11g03130 E2F-related protein, putative, expressed gene E2F-related protein, putative, expressed chr11 1127554 1129426 + downstream 9 LOC_Os04g32980 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr4 19768138 19770192 - downstream 9 LOC_Os06g44930 expressed protein gene expressed protein chr6 27161269 27162328 - downstream 9 LOC_Os06g10810 phosphate carrier protein, mitochondrial precursor, putative, expressed gene phosphate carrier protein, mitochondrial precursor, putative, expressed chr6 5637273 5640661 + downstream 9 LOC_Os12g29600 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 17652550 17653342 + downstream 9 LOC_Os04g13030 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 7178837 7184935 - downstream 9 LOC_Os01g56110 RNA recognition motif containing protein, putative gene RNA recognition motif containing protein, putative chr1 32302655 32305593 + downstream 9 LOC_Os01g34500 hypothetical protein gene hypothetical protein chr1 19021457 19022867 - downstream 9 LOC_Os04g56770 conserved hypothetical protein gene conserved hypothetical protein chr4 33671620 33673950 + downstream 9 LOC_Os11g18194 cycloartenol synthase, putative, expressed gene cycloartenol synthase, putative, expressed chr11 10230405 10261952 - downstream 9 LOC_Os10g40080 conserved hypothetical protein gene conserved hypothetical protein chr10 21390831 21391812 - downstream 9 LOC_Os01g16460 hypothetical protein gene hypothetical protein chr1 9343857 9346379 - downstream 9 LOC_Os05g38370 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed gene peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed chr5 22429840 22432453 - downstream 9 LOC_Os03g30860 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 17582165 17586478 + downstream 9 LOC_Os03g14070 conserved hypothetical protein gene conserved hypothetical protein chr3 7644817 7645035 + downstream 9 LOC_Os01g19320 hypothetical protein gene hypothetical protein chr1 10930600 10932037 + downstream 9 LOC_Os10g22830 hypothetical protein gene hypothetical protein chr10 11792762 11794183 - downstream 9 LOC_Os11g28600 expressed protein gene expressed protein chr11 16041830 16042812 - downstream 9 LOC_Os05g43700 conserved hypothetical protein gene conserved hypothetical protein chr5 25339836 25341893 - downstream 9 LOC_Os04g14290 hypothetical protein gene hypothetical protein chr4 8001738 8002727 - downstream 9 LOC_Os05g35890 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 21224822 21228153 - downstream 9 LOC_Os11g41310 MBTB66 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB66 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr11 24292552 24293694 + downstream 9 LOC_Os02g10250 hypothetical protein gene hypothetical protein chr2 5369277 5369552 + downstream 9 LOC_Os04g46800 hypothetical protein gene hypothetical protein chr4 27553087 27553368 + downstream 9 LOC_Os08g05070 translation initiation factor IF-2, putative gene translation initiation factor IF-2, putative chr8 2605470 2608513 + downstream 9 LOC_Os01g56720 expressed protein gene expressed protein chr1 32725097 32726401 - downstream 9 LOC_Os05g04810 hypothetical protein gene hypothetical protein chr5 2294799 2295450 + downstream 9 LOC_Os03g42870 hypothetical protein gene hypothetical protein chr3 23900054 23900365 - downstream 9 LOC_Os05g34990 hypothetical protein gene hypothetical protein chr5 20725618 20726192 + downstream 9 LOC_Os02g34060 hypothetical protein gene hypothetical protein chr2 20347821 20349145 + downstream 9 LOC_Os07g48090 CAMK_KIN1/SNF1/Nim1_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_KIN1/SNF1/Nim1_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr7 28709757 28711899 + downstream 9 LOC_Os11g07600 ABC-2 type transporter domain containing protein, expressed gene ABC-2 type transporter domain containing protein, expressed chr11 3849448 3853184 - downstream 9 LOC_Os10g01750 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 481660 486640 - downstream 9 LOC_Os08g08260 hypothetical protein gene hypothetical protein chr8 4726771 4728063 - downstream 9 LOC_Os09g35560 expressed protein gene expressed protein chr9 20433969 20434584 - downstream 9 LOC_Os02g46950 hypothetical protein gene hypothetical protein chr2 28659035 28659376 + downstream 9 LOC_Os09g15060 hypothetical protein gene hypothetical protein chr9 9104916 9110419 + downstream 9 LOC_Os10g25330 hypothetical protein gene hypothetical protein chr10 13029776 13030304 + downstream 9 LOC_Os06g40950 DNA-directed RNA polymerase I subunit RPA1, putative, expressed gene DNA-directed RNA polymerase I subunit RPA1, putative, expressed chr6 24424495 24426135 + downstream 9 LOC_Os01g70720 expressed protein gene expressed protein chr1 40936774 40939975 - downstream 9 LOC_Os01g52500 NADP-dependent malic enzyme, putative, expressed gene NADP-dependent malic enzyme, putative, expressed chr1 30164972 30170614 + downstream 9 LOC_Os02g57766 expressed protein gene expressed protein chr2 35367235 35370007 - downstream 9 LOC_Os12g36230 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr12 22167689 22168066 + downstream 9 LOC_Os12g22850 hypothetical protein gene hypothetical protein chr12 12896882 12897298 - downstream 9 LOC_Os03g20250 hypothetical protein gene hypothetical protein chr3 11441811 11442089 + downstream 9 LOC_Os03g04570 peptide transporter PTR3-A, putative, expressed gene peptide transporter PTR3-A, putative, expressed chr3 2130968 2135721 - downstream 9 LOC_Os03g58980 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr3 33579335 33580234 + downstream 9 LOC_Os06g12210 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr6 6555803 6556320 + downstream 9 LOC_Os02g16760 OsFBX41 - F-box domain containing protein gene OsFBX41 - F-box domain containing protein chr2 9562675 9563847 + downstream 9 LOC_Os01g06060 gibberellin receptor GID1L2, putative, expressed gene gibberellin receptor GID1L2, putative, expressed chr1 2895685 2897069 + downstream 9 LOC_Os06g22410 hypothetical protein gene hypothetical protein chr6 13028815 13029183 + downstream 9 LOC_Os12g01010 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr12 1682 4428 + downstream 9 LOC_Os01g33540 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr1 18458215 18462299 - downstream 9 LOC_Os03g08870 expressed protein gene expressed protein chr3 4595021 4597262 + downstream 9 LOC_Os01g12560 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed gene 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed chr1 6908691 6911131 - downstream 9 LOC_Os01g71370 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 41361861 41362811 + downstream 9 LOC_Os03g11900 transporter family protein, putative, expressed gene transporter family protein, putative, expressed chr3 6231979 6237297 - downstream 9 LOC_Os01g28800 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 16133709 16134189 - downstream 9 LOC_Os08g38860 hypothetical protein gene hypothetical protein chr8 24563565 24565344 - downstream 9 LOC_Os02g26320 fasciclin-like arabinogalactan precursor protein, putative, expressed gene fasciclin-like arabinogalactan precursor protein, putative, expressed chr2 15453153 15454310 - downstream 9 LOC_Os02g35240 dehydration-responsive element-binding protein, putative gene dehydration-responsive element-binding protein, putative chr2 21178266 21178778 - downstream 9 LOC_Os06g32944 transposon protein, putative, Pong sub-class, expressed gene transposon protein, putative, Pong sub-class, expressed chr6 19186000 19191401 - downstream 9 LOC_Os02g03910 OsFBX35 - F-box domain containing protein gene OsFBX35 - F-box domain containing protein chr2 1664217 1665802 + downstream 9 LOC_Os03g47730 homeobox domain containing protein, expressed gene homeobox domain containing protein, expressed chr3 27044046 27047051 - downstream 9 LOC_Os08g09940 GTP-binding protein, putative, expressed gene GTP-binding protein, putative, expressed chr8 5745740 5751489 + downstream 9 LOC_Os09g09290 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr9 4971691 4979074 - downstream 9 LOC_Os08g02740 hypothetical protein gene hypothetical protein chr8 1150541 1151656 - downstream 9 LOC_Os02g45344 O-acyltransferase, putative, expressed gene O-acyltransferase, putative, expressed chr2 27553334 27561180 + downstream 9 LOC_Os10g21050 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr10 10591246 10592282 - downstream 9 LOC_Os01g55340 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr1 31849493 31850575 - downstream 9 LOC_Os10g22700 AAA-type ATPase family protein, putative, expressed gene AAA-type ATPase family protein, putative, expressed chr10 11721066 11721915 + downstream 9 LOC_Os07g27280 conserved hypothetical protein gene conserved hypothetical protein chr7 15851236 15853534 + downstream 9 LOC_Os05g14030 receptor kinase, putative gene receptor kinase, putative chr5 7837163 7837537 + downstream 9 LOC_Os12g27760 OsFBX442 - F-box domain containing protein gene OsFBX442 - F-box domain containing protein chr12 16365231 16366466 + downstream 9 LOC_Os11g01380 clathrin heavy chain, putative, expressed gene clathrin heavy chain, putative, expressed chr11 233174 243464 + downstream 9 LOC_Os01g14650 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr1 8195003 8196164 - downstream 9 LOC_Os07g35700 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed gene TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed chr7 21383754 21387291 - downstream 9 LOC_Os03g60000 SPFH domain/Band 7 family protein gene SPFH domain/Band 7 family protein chr3 34118610 34121084 - downstream 9 LOC_Os11g15230 expressed protein gene expressed protein chr11 8591591 8593583 - downstream 9 LOC_Os02g34250 expressed protein gene expressed protein chr2 20483132 20484110 - downstream 9 LOC_Os06g03320 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 1265315 1268078 - downstream 9 LOC_Os02g17210 OsFBX43 - F-box domain containing protein gene OsFBX43 - F-box domain containing protein chr2 9867022 9868131 - downstream 9 LOC_Os06g23900 hypothetical protein gene hypothetical protein chr6 13965723 13966055 - downstream 9 LOC_Os09g20130 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 12059630 12061803 + downstream 9 LOC_Os02g39200 nucleotide-sugar transporter family protein, putative, expressed gene nucleotide-sugar transporter family protein, putative, expressed chr2 23671476 23676796 + downstream 9 LOC_Os11g43380 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 25716258 25719198 - downstream 9 LOC_Os06g23600 expressed protein gene expressed protein chr6 13761014 13766165 - downstream 9 LOC_Os07g17330 B12D protein, putative, expressed gene B12D protein, putative, expressed chr7 10230835 10231708 + downstream 9 LOC_Os03g42334 hypothetical protein gene hypothetical protein chr3 23553539 23554075 + downstream 9 LOC_Os01g08250 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 4023855 4029589 - downstream 9 LOC_Os02g37470 tetratricopeptide repeat containing protein, putative, expressed gene tetratricopeptide repeat containing protein, putative, expressed chr2 22611634 22614236 + downstream 9 LOC_Os02g32380 hypothetical protein gene hypothetical protein chr2 19123027 19124601 + downstream 9 LOC_Os08g35665 LTPL48 - Protease inhibitor/seed storage/LTP family protein precursor gene LTPL48 - Protease inhibitor/seed storage/LTP family protein precursor chr8 22488415 22489056 + downstream 9 LOC_Os07g41950 hypothetical protein gene hypothetical protein chr7 25120447 25120821 + downstream 9 LOC_Os08g19330 hypothetical protein gene hypothetical protein chr8 11563185 11564168 + downstream 9 LOC_Os06g08950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 4508033 4514188 - downstream 9 LOC_Os07g01360 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 229588 231835 - downstream 9 LOC_Os11g19230 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 10986703 10991860 + downstream 9 LOC_Os04g45040 DEAD-box ATP-dependent RNA helicase, putative, expressed gene DEAD-box ATP-dependent RNA helicase, putative, expressed chr4 26458896 26465142 + downstream 9 LOC_Os12g04380 GRAS family transcription factor containing protein gene GRAS family transcription factor containing protein chr12 1858794 1860188 - downstream 9 LOC_Os12g30490 ribosomal protein L4, putative, expressed gene ribosomal protein L4, putative, expressed chr12 18272661 18277148 + downstream 9 LOC_Os05g06550 hypothetical protein gene hypothetical protein chr5 3379788 3380238 - downstream 9 LOC_Os09g36150 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 20826782 20828631 + downstream 9 LOC_Os08g03890 hypothetical protein gene hypothetical protein chr8 1854397 1856013 - downstream 9 LOC_Os10g24360 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr10 12408041 12408933 + downstream 9 LOC_Os07g15310 hypothetical protein gene hypothetical protein chr7 8825744 8826383 + downstream 9 LOC_Os02g29250 hypothetical protein gene hypothetical protein chr2 17373665 17374369 - downstream 9 LOC_Os11g15610 hypothetical protein gene hypothetical protein chr11 8852393 8853555 - downstream 9 LOC_Os02g54100 expressed protein gene expressed protein chr2 33132036 33136348 + downstream 9 LOC_Os08g23570 B3 DNA binding domain containing protein gene B3 DNA binding domain containing protein chr8 14257786 14260792 - downstream 9 LOC_Os01g03410 ubiquitin, putative gene ubiquitin, putative chr1 1371963 1373138 + downstream 9 LOC_Os06g38040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 22486701 22491138 - downstream 9 LOC_Os02g19280 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 11265363 11271755 + downstream 9 LOC_Os01g50800 hypothetical protein gene hypothetical protein chr1 29177930 29181692 - downstream 9 LOC_Os08g38350 hypothetical protein gene hypothetical protein chr8 24282823 24284532 - downstream 9 LOC_Os09g29630 NOL1/NOP2/sun family protein, putative, expressed gene NOL1/NOP2/sun family protein, putative, expressed chr9 18012220 18019627 + downstream 9 LOC_Os01g40370 phosphatase-associated family protein, putative gene phosphatase-associated family protein, putative chr1 22790068 22792679 + downstream 9 LOC_Os02g10290 copper-transporting ATPase, putative, expressed gene copper-transporting ATPase, putative, expressed chr2 5404703 5410764 + downstream 9 LOC_Os05g10380 RWP-RK, putative gene RWP-RK, putative chr5 5657428 5659837 - downstream 9 LOC_Os06g10860 glucosyltransferase, putative gene glucosyltransferase, putative chr6 5662969 5664310 + downstream 9 LOC_Os12g05430 ribosomal protein L24, putative, expressed gene ribosomal protein L24, putative, expressed chr12 2459538 2460360 - downstream 9 LOC_Os02g36820 hypothetical protein gene hypothetical protein chr2 22205122 22205859 + downstream 9 LOC_Os08g39520 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr8 24997905 24999696 + downstream 9 LOC_Os11g04550 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr11 1919916 1920998 - downstream 9 LOC_Os02g39750 inorganic phosphate transporter, putative gene inorganic phosphate transporter, putative chr2 23999619 24000970 - downstream 9 LOC_Os01g45420 ubiquitin family protein, putative, expressed gene ubiquitin family protein, putative, expressed chr1 25770548 25771006 + downstream 9 LOC_Os02g49350 plastocyanin-like domain containing protein, putative, expressed gene plastocyanin-like domain containing protein, putative, expressed chr2 30151730 30152794 - downstream 9 LOC_Os02g36430 hypothetical protein gene hypothetical protein chr2 21999875 22000123 - downstream 9 LOC_Os02g05790 hypothetical protein gene hypothetical protein chr2 2858631 2861703 - downstream 9 LOC_Os12g36420 conserved hypothetical protein gene conserved hypothetical protein chr12 22254353 22257308 + downstream 9 LOC_Os06g17560 cadmium tolerance factor, putative, expressed gene cadmium tolerance factor, putative, expressed chr6 10183017 10184177 - downstream 9 LOC_Os03g28420 3-oxoacyl-synthase, putative, expressed gene 3-oxoacyl-synthase, putative, expressed chr3 16370177 16377122 + downstream 9 LOC_Os11g06350 hypothetical protein gene hypothetical protein chr11 3036436 3041205 - downstream 9 LOC_Os03g41200 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr3 22909826 22917028 - downstream 9 LOC_Os04g56210 polyprenyl synthetase, putative, expressed gene polyprenyl synthetase, putative, expressed chr4 33332041 33334937 - downstream 9 LOC_Os11g45550 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 27103426 27104415 - downstream 9 LOC_Os11g15480 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr11 8762025 8762647 + downstream 9 LOC_Os01g53779 expressed protein gene expressed protein chr1 30908386 30915432 + downstream 9 LOC_Os07g47820 acyl-CoA dehydrogenase family member 10, putative, expressed gene acyl-CoA dehydrogenase family member 10, putative, expressed chr7 28551630 28559013 + downstream 9 LOC_Os11g28910 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 16263343 16270204 + downstream 9 LOC_Os02g10240 ZOS2-05 - C2H2 zinc finger protein, expressed gene ZOS2-05 - C2H2 zinc finger protein, expressed chr2 5364379 5366226 - downstream 9 LOC_Os12g02280 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr12 717524 721216 + downstream 9 LOC_Os06g45880 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr6 27770299 27775101 + downstream 9 LOC_Os07g04050 conserved hypothetical protein gene conserved hypothetical protein chr7 1714861 1715781 + downstream 9 LOC_Os03g41675 hypothetical protein gene hypothetical protein chr3 23156358 23157615 - downstream 9 LOC_Os02g50174 caleosin related protein, putative, expressed gene caleosin related protein, putative, expressed chr2 30636523 30648742 + downstream 9 LOC_Os01g02884 ATP-dependent RNA helicase DHX36, putative, expressed gene ATP-dependent RNA helicase DHX36, putative, expressed chr1 1023184 1029112 + downstream 9 LOC_Os01g66530 ARGOS, putative, expressed gene ARGOS, putative, expressed chr1 38636288 38637191 + downstream 9 LOC_Os04g32290 hypothetical protein gene hypothetical protein chr4 19176937 19177333 + downstream 9 LOC_Os02g43680 hypothetical protein gene hypothetical protein chr2 26358015 26358512 - downstream 9 LOC_Os11g04700 hypothetical protein gene hypothetical protein chr11 1997078 2000551 - downstream 9 LOC_Os08g05770 expressed protein gene expressed protein chr8 3087715 3088754 - downstream 9 LOC_Os12g39910 hypothetical protein gene hypothetical protein chr12 24623929 24624704 + downstream 9 LOC_Os08g06090 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr8 3325354 3326614 - downstream 9 LOC_Os11g25870 hypothetical protein gene hypothetical protein chr11 14278656 14279356 - downstream 9 LOC_Os02g46550 hypothetical protein gene hypothetical protein chr2 28382185 28382508 + downstream 9 LOC_Os08g03825 expressed protein gene expressed protein chr8 1827126 1830892 - downstream 9 LOC_Os12g17090 stripe rust resistance protein Yr10, putative, expressed gene stripe rust resistance protein Yr10, putative, expressed chr12 9779367 9784168 - downstream 9 LOC_Os02g51000 CS domain containing protein, putative, expressed gene CS domain containing protein, putative, expressed chr2 31188400 31191828 - downstream 9 LOC_Os04g34460 PAP fibrillin family domain containing protein, expressed gene PAP fibrillin family domain containing protein, expressed chr4 20701379 20704413 + downstream 9 LOC_Os05g04130 conserved hypothetical protein gene conserved hypothetical protein chr5 1849182 1849919 + downstream 9 LOC_Os10g20880 LTPL136 - Protease inhibitor/seed storage/LTP family protein precursor, putative gene LTPL136 - Protease inhibitor/seed storage/LTP family protein precursor, putative chr10 10506631 10507777 - downstream 9 LOC_Os01g46840 expressed protein gene expressed protein chr1 26716790 26721402 + downstream 9 LOC_Os11g02379 LTPL6 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL6 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr11 696508 701420 + downstream 9 LOC_Os06g40348 unknown gene unknown chr6 24015153 24015455 - downstream 9 LOC_Os04g44160 hypothetical protein gene hypothetical protein chr4 25953892 25954098 - downstream 9 LOC_Os04g33240 sex determination protein tasselseed-2, putative, expressed gene sex determination protein tasselseed-2, putative, expressed chr4 19937611 19938778 - downstream 9 LOC_Os01g71460 OsFBDUF11 - F-box and DUF domain containing protein, expressed gene OsFBDUF11 - F-box and DUF domain containing protein, expressed chr1 41393682 41395160 - downstream 9 LOC_Os01g19600 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 11104195 11107524 - downstream 9 LOC_Os01g73690 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr1 42694047 42698015 - downstream 9 LOC_Os06g41240 expressed protein gene expressed protein chr6 24679282 24680232 - downstream 9 LOC_Os02g02219 unknown gene unknown chr2 698138 698327 + downstream 9 LOC_Os06g03010 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 1105020 1105813 + downstream 9 LOC_Os12g01400 OsCML26 - Calmodulin-related calcium sensor protein gene OsCML26 - Calmodulin-related calcium sensor protein chr12 259311 260030 - downstream 9 LOC_Os01g20770 hypothetical protein gene hypothetical protein chr1 11579987 11580824 - downstream 9 LOC_Os08g23160 conserved hypothetical protein gene conserved hypothetical protein chr8 13962845 13969352 + downstream 9 LOC_Os12g43310 hypothetical protein gene hypothetical protein chr12 26846388 26846705 + downstream 9 LOC_Os05g44980 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr5 26088132 26089866 + downstream 9 LOC_Os09g26430 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 15973480 15978873 - downstream 9 LOC_Os11g46890 conserved hypothetical protein gene conserved hypothetical protein chr11 27649168 27649764 - downstream 9 LOC_Os04g11190 hypothetical protein gene hypothetical protein chr4 6086747 6089633 - downstream 9 LOC_Os01g09820 unknown gene unknown chr1 5078127 5079367 - downstream 9 LOC_Os05g40700 transmembrane protein 56, putative, expressed gene transmembrane protein 56, putative, expressed chr5 23803174 23806955 + downstream 9 LOC_Os03g58840 vesicle-associated membrane protein, putative, expressed gene vesicle-associated membrane protein, putative, expressed chr3 33499951 33503242 + downstream 9 LOC_Os08g37199 unknown gene unknown chr8 23499222 23499587 + downstream 9 LOC_Os01g14330 conserved hypothetical protein gene conserved hypothetical protein chr1 8029884 8030842 + downstream 9 LOC_Os11g38600 TruB family pseudouridylate synthase, putative gene TruB family pseudouridylate synthase, putative chr11 22406034 22406462 + downstream 9 LOC_Os03g04300 ankyrin repeat domain containing protein, expressed gene ankyrin repeat domain containing protein, expressed chr3 1969292 1978563 - downstream 9 LOC_Os06g42450 hypothetical protein gene hypothetical protein chr6 25511491 25511943 - downstream 9 LOC_Os04g41580 glycine-rich protein, putative, expressed gene glycine-rich protein, putative, expressed chr4 24482123 24485845 - downstream 9 LOC_Os08g09630 hypothetical protein gene hypothetical protein chr8 5569882 5570337 + downstream 9 LOC_Os04g42560 conserved hypothetical protein gene conserved hypothetical protein chr4 24994722 24995015 + downstream 9 LOC_Os02g30800 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed gene POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed chr2 18343019 18365090 + downstream 9 LOC_Os04g42200 expressed protein gene expressed protein chr4 24786300 24787269 - downstream 9 LOC_Os02g18710 hypothetical protein gene hypothetical protein chr2 10920084 10920551 + downstream 9 LOC_Os04g46050 Alg9-like mannosyltransferase protein, putative, expressed gene Alg9-like mannosyltransferase protein, putative, expressed chr4 27090084 27097638 - downstream 9 LOC_Os01g12520 mitochondrial carrier protein, putative, expressed gene mitochondrial carrier protein, putative, expressed chr1 6878905 6880968 - downstream 9 LOC_Os09g30980 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr9 18656384 18658176 - downstream 9 LOC_Os10g30550 tRNA methyltransferase, putative, expressed gene tRNA methyltransferase, putative, expressed chr10 15813497 15822378 - downstream 9 LOC_Os11g37790 mla, putative gene mla, putative chr11 21916290 21918632 + downstream 9 LOC_Os06g46320 unknown gene unknown chr6 28077387 28077767 - downstream 9 LOC_Os11g24740 hypothetical protein gene hypothetical protein chr11 13632819 13633240 + downstream 9 LOC_Os04g34810 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr4 20930077 20931483 + downstream 9 LOC_Os10g05480 expressed protein gene expressed protein chr10 2704502 2705326 + downstream 9 LOC_Os11g19280 hypothetical protein gene hypothetical protein chr11 11042289 11043202 + downstream 9 LOC_Os11g03440 myb-like DNA-binding domain containing protein, putative, expressed gene myb-like DNA-binding domain containing protein, putative, expressed chr11 1316227 1317706 - downstream 9 LOC_Os04g36020 OsFBX138 - F-box domain containing protein gene OsFBX138 - F-box domain containing protein chr4 21792683 21793942 - downstream 9 LOC_Os07g15520 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 9001306 9001734 - downstream 9 LOC_Os03g01710 expressed protein gene expressed protein chr3 439339 446586 + downstream 9 LOC_Os09g16190 hypothetical protein gene hypothetical protein chr9 9874701 9875672 + downstream 9 LOC_Os10g39600 hypothetical protein gene hypothetical protein chr10 21093744 21095113 + downstream 9 LOC_Os06g13430 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 7387963 7392345 + downstream 9 LOC_Os07g09360 hypothetical protein gene hypothetical protein chr7 4932281 4932613 + downstream 9 LOC_Os03g20900 Myb transcription factor, putative, expressed gene Myb transcription factor, putative, expressed chr3 11837678 11839978 + downstream 9 LOC_Os05g46780 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr5 27030910 27036386 + downstream 9 LOC_Os10g23900 decarboxylase, putative gene decarboxylase, putative chr10 12189485 12191065 - downstream 9 LOC_Os01g10660 hypothetical protein gene hypothetical protein chr1 5692664 5692990 - downstream 9 LOC_Os12g25190 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 14469211 14474666 - downstream 9 LOC_Os09g20450 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 12304525 12309172 + downstream 9 LOC_Os02g30370 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 18078705 18082394 - downstream 9 LOC_Os10g10550 hypothetical protein gene hypothetical protein chr10 5847913 5848750 + downstream 9 LOC_Os08g38510 hypothetical protein gene hypothetical protein chr8 24361641 24362096 + downstream 9 LOC_Os04g56420 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr4 33450793 33453301 + downstream 9 LOC_Os10g30350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 15696191 15701416 - downstream 9 LOC_Os02g53000 lysM domain-containing GPI-anchored protein precursor, putative, expressed gene lysM domain-containing GPI-anchored protein precursor, putative, expressed chr2 32420453 32423529 - downstream 9 LOC_Os01g14380 conserved hypothetical protein gene conserved hypothetical protein chr1 8056723 8056935 - downstream 9 LOC_Os02g54420 hypro1, putative, expressed gene hypro1, putative, expressed chr2 33340465 33341388 - downstream 9 LOC_Os04g34620 expressed protein gene expressed protein chr4 20777669 20780861 - downstream 9 LOC_Os01g12100 expressed protein gene expressed protein chr1 6586146 6586940 - downstream 9 LOC_Os11g04850 DTW domain containing protein, putative, expressed gene DTW domain containing protein, putative, expressed chr11 2059758 2062407 - downstream 9 LOC_Os01g03890 DUF260 domain containing protein, putative, expressed gene DUF260 domain containing protein, putative, expressed chr1 1656315 1657388 + downstream 9 LOC_Os12g44340 ATMAP70 protein, putative, expressed gene ATMAP70 protein, putative, expressed chr12 27453510 27457990 + downstream 9 LOC_Os11g46840 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 27588667 27591762 - downstream 9 LOC_Os10g28960 conserved hypothetical protein gene conserved hypothetical protein chr10 15029551 15029904 + downstream 9 LOC_Os04g40025 hypothetical protein gene hypothetical protein chr4 23634809 23637197 + downstream 9 LOC_Os03g60992 conserved hypothetical protein gene conserved hypothetical protein chr3 34639082 34646370 - downstream 9 LOC_Os02g20520 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr2 12103228 12105794 - downstream 9 LOC_Os06g34049 unknown gene unknown chr6 19830711 19831023 + downstream 9 LOC_Os01g53970 circumsporozoite protein precursor, putative gene circumsporozoite protein precursor, putative chr1 31030292 31030888 - downstream 9 LOC_Os11g03990 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr11 1609887 1614246 - downstream 9 LOC_Os02g33335 expressed protein gene expressed protein chr2 19795228 19796305 - downstream 9 LOC_Os11g13740 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 7556618 7562370 - downstream 9 LOC_Os09g30412 heat shock protein, putative, expressed gene heat shock protein, putative, expressed chr9 18513571 18517315 - downstream 9 LOC_Os04g44430 transporter, major facilitator family, putative, expressed gene transporter, major facilitator family, putative, expressed chr4 26114305 26122622 + downstream 9 LOC_Os12g23930 protein kinase domain containing protein, expressed gene protein kinase domain containing protein, expressed chr12 13597009 13598474 - downstream 9 LOC_Os10g05120 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 2499790 2500504 - downstream 9 LOC_Os02g46190 DUF581 domain containing protein gene DUF581 domain containing protein chr2 28138319 28138792 - downstream 9 LOC_Os12g40720 hypothetical protein gene hypothetical protein chr12 25173956 25177221 + downstream 9 LOC_Os03g42250 B3 DNA binding domain containing protein gene B3 DNA binding domain containing protein chr3 23507083 23509795 + downstream 9 LOC_Os12g05440 cytochrome P450, putative, expressed gene cytochrome P450, putative, expressed chr12 2467056 2468585 - downstream 9 LOC_Os01g09980 conserved hypothetical protein gene conserved hypothetical protein chr1 5194718 5195952 + downstream 9 LOC_Os04g14360 hypothetical protein gene hypothetical protein chr4 8035930 8037547 - downstream 9 LOC_Os05g33830 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr5 19890858 19891547 - downstream 9 LOC_Os03g20740 expressed protein gene expressed protein chr3 11737874 11738576 - downstream 9 LOC_Os10g29370 snRNP protein, putative gene snRNP protein, putative chr10 15195335 15195805 - downstream 9 LOC_Os08g24740 hypothetical protein gene hypothetical protein chr8 14967980 14968613 - downstream 9 LOC_Os11g28000 hypothetical protein gene hypothetical protein chr11 15630787 15632590 - downstream 9 LOC_Os03g47420 OsFBX107 - F-box domain containing protein gene OsFBX107 - F-box domain containing protein chr3 26802043 26803585 + downstream 9 LOC_Os02g53169 expressed protein gene expressed protein chr2 32540052 32541514 + downstream 9 LOC_Os02g11070 3-ketoacyl-CoA synthase, putative, expressed gene 3-ketoacyl-CoA synthase, putative, expressed chr2 5930193 5933079 - downstream 9 LOC_Os02g42630 hypothetical protein gene hypothetical protein chr2 25638667 25639105 - downstream 9 LOC_Os02g28730 conserved hypothetical protein gene conserved hypothetical protein chr2 16995014 16995583 + downstream 9 LOC_Os01g74100 conserved hypothetical protein gene conserved hypothetical protein chr1 42903341 42904057 + downstream 9 LOC_Os05g15300 expressed protein gene expressed protein chr5 8676488 8679198 - downstream 9 LOC_Os02g24950 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 14457745 14461411 - downstream 9 LOC_Os05g46730 hypothetical protein gene hypothetical protein chr5 26988967 26990818 - downstream 9 LOC_Os11g42580 Leucine Rich Repeat family protein gene Leucine Rich Repeat family protein chr11 25160697 25165031 + downstream 9 LOC_Os05g51360 DnaK family protein, putative, expressed gene DnaK family protein, putative, expressed chr5 29392914 29394510 + downstream 9 LOC_Os10g03520 expressed protein gene expressed protein chr10 1522636 1523414 + downstream 9 LOC_Os04g42820 hypothetical protein gene hypothetical protein chr4 25159752 25160664 - downstream 9 LOC_Os03g59980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 34112885 34114047 - downstream 9 LOC_Os03g56040 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 31903607 31905778 + downstream 9 LOC_Os07g41310 COBRA, putative, expressed gene COBRA, putative, expressed chr7 24750594 24754403 + downstream 9 LOC_Os03g53600 HTH DNA-binding protein, putative, expressed gene HTH DNA-binding protein, putative, expressed chr3 30729354 30733145 + downstream 9 LOC_Os03g44240 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 24856501 24860861 - downstream 9 LOC_Os06g16960 O-methyltransferase, putative gene O-methyltransferase, putative chr6 9831188 9833592 - downstream 9 LOC_Os06g29970 hypothetical protein gene hypothetical protein chr6 17254073 17254441 + downstream 9 LOC_Os02g47950 expressed protein gene expressed protein chr2 29324660 29325470 - downstream 9 LOC_Os02g40590 hypothetical protein gene hypothetical protein chr2 24618878 24619516 - downstream 9 LOC_Os12g11990 expressed protein gene expressed protein chr12 6566005 6566550 - downstream 9 LOC_Os06g06630 hypothetical protein gene hypothetical protein chr6 3117179 3118435 - downstream 9 LOC_Os04g43870 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 25796361 25801697 - downstream 9 LOC_Os11g06620 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 3194553 3206778 + downstream 9 LOC_Os10g41160 expressed protein gene expressed protein chr10 22040771 22042239 - downstream 9 LOC_Os07g29550 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr7 17347785 17352545 + downstream 9 LOC_Os01g05210 hypothetical protein gene hypothetical protein chr1 2447716 2448048 + downstream 9 LOC_Os12g17830 expressed protein gene expressed protein chr12 10205269 10208580 - downstream 9 LOC_Os08g17080 PPR repeat domain containing protein, putative, expressed gene PPR repeat domain containing protein, putative, expressed chr8 10452821 10457049 + downstream 9 LOC_Os02g13280 hypothetical protein gene hypothetical protein chr2 7071614 7073455 + downstream 9 LOC_Os05g49780 histone-like transcription factor and archaeal histone, putative, expressed gene histone-like transcription factor and archaeal histone, putative, expressed chr5 28509763 28512588 + downstream 9 LOC_Os07g18154 aldehyde oxidase 4, putative, expressed gene aldehyde oxidase 4, putative, expressed chr7 10747752 10759854 + downstream 9 LOC_Os05g18870 hypothetical protein gene hypothetical protein chr5 10960433 10960771 - downstream 9 LOC_Os12g11380 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 6146118 6149469 + downstream 9 LOC_Os12g34796 expressed protein gene expressed protein chr12 21102752 21104725 + downstream 9 LOC_Os07g34840 conserved hypothetical protein gene conserved hypothetical protein chr7 20880206 20881075 + downstream 9 LOC_Os09g38330 MORN repeat domain containing protein, expressed gene MORN repeat domain containing protein, expressed chr9 22047983 22056548 - downstream 9 LOC_Os06g40970 conserved hypothetical protein gene conserved hypothetical protein chr6 24459620 24462919 + downstream 9 LOC_Os07g47320 hypothetical protein gene hypothetical protein chr7 28288785 28296351 + downstream 9 LOC_Os06g06550 plant protein of unknown function domain containing protein, expressed gene plant protein of unknown function domain containing protein, expressed chr6 3073187 3076782 - downstream 9 LOC_Os06g23160 bacterial transferase hexapeptide domain containing protein, expressed gene bacterial transferase hexapeptide domain containing protein, expressed chr6 13513668 13520730 - downstream 9 LOC_Os04g04200 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 1949622 1954508 + downstream 9 LOC_Os02g45570 growth regulating factor protein, putative, expressed gene growth regulating factor protein, putative, expressed chr2 27721773 27723113 + downstream 9 LOC_Os07g31460 peptide-Nasparagine amidase, putative, expressed gene peptide-Nasparagine amidase, putative, expressed chr7 18642027 18652635 + downstream 9 LOC_Os04g49310 tRNA-splicing endonuclease positive effector-related, putative, expressed gene tRNA-splicing endonuclease positive effector-related, putative, expressed chr4 29245875 29249250 - downstream 9 LOC_Os08g34610 hypothetical protein gene hypothetical protein chr8 21745382 21747304 - downstream 9 LOC_Os10g03940 hypothetical protein gene hypothetical protein chr10 1788719 1789812 - downstream 9 LOC_Os08g33260 conserved hypothetical protein gene conserved hypothetical protein chr8 20717692 20719712 + downstream 9 LOC_Os12g37240 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 22808803 22812500 + downstream 9 LOC_Os06g02880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 1055494 1060323 + downstream 9 LOC_Os01g61500 BAG domain containing protein, expressed gene BAG domain containing protein, expressed chr1 35581220 35584684 + downstream 9 LOC_Os02g51310 TCP family transcription factor, putative gene TCP family transcription factor, putative chr2 31410992 31411809 + downstream 9 LOC_Os10g07556 wall-associated receptor kinase-like 22 precursor, putative, expressed gene wall-associated receptor kinase-like 22 precursor, putative, expressed chr10 4074620 4080597 - downstream 9 LOC_Os08g39550 polygalacturonase inhibitor 2 precursor, putative, expressed gene polygalacturonase inhibitor 2 precursor, putative, expressed chr8 25012977 25014649 - downstream 9 LOC_Os01g21010 conserved hypothetical protein gene conserved hypothetical protein chr1 11726399 11729017 + downstream 9 LOC_Os04g35920 nonsense-mediated decay UPF3, putative, expressed gene nonsense-mediated decay UPF3, putative, expressed chr4 21725135 21732811 - downstream 9 LOC_Os03g25220 OsFBX88 - F-box domain containing protein gene OsFBX88 - F-box domain containing protein chr3 14412275 14413597 - downstream 9 LOC_Os01g47284 hypothetical protein gene hypothetical protein chr1 27023071 27025064 + downstream 9 LOC_Os09g21150 hypothetical protein gene hypothetical protein chr9 12760129 12762148 - downstream 9 LOC_Os06g23340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 13624304 13627908 + downstream 9 LOC_Os11g05680 hypothetical protein gene hypothetical protein chr11 2573598 2574206 - downstream 9 LOC_Os03g47036 homeotic protein knotted-1, putative gene homeotic protein knotted-1, putative chr3 26596339 26598803 - downstream 9 LOC_Os12g12889 unknown gene unknown chr12 7133602 7134425 - downstream 9 LOC_Os04g33885 expressed protein gene expressed protein chr4 20356829 20358364 - downstream 9 LOC_Os12g06440 expressed protein gene expressed protein chr12 3086039 3090664 - downstream 9 LOC_Os01g24240 conserved hypothetical protein gene conserved hypothetical protein chr1 13660976 13663748 + downstream 9 LOC_Os01g19940 expressed protein gene expressed protein chr1 11315577 11319173 + downstream 9 LOC_Os05g49730 protein phosphatase 2C, putative, expressed gene protein phosphatase 2C, putative, expressed chr5 28461017 28463380 - downstream 9 LOC_Os04g50060 GRAS family transcription factor domain containing protein, expressed gene GRAS family transcription factor domain containing protein, expressed chr4 29672408 29675429 + downstream 9 LOC_Os06g42130 leucoanthocyanidin dioxygenase, putative, expressed gene leucoanthocyanidin dioxygenase, putative, expressed chr6 25294994 25296319 - downstream 9 LOC_Os03g06160 BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed gene BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed chr3 3090853 3094659 + downstream 9 LOC_Os10g31830 ras-related protein, putative, expressed gene ras-related protein, putative, expressed chr10 16621978 16626288 - downstream 9 LOC_Os03g12490 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr3 6601163 6605281 - downstream 9 LOC_Os04g53980 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr4 31978387 31980567 - downstream 9 LOC_Os01g71330 expressed protein gene expressed protein chr1 41342284 41343241 + downstream 9 LOC_Os11g03080 hypothetical protein gene hypothetical protein chr11 1088498 1089132 + downstream 9 LOC_Os10g03500 hypothetical protein gene hypothetical protein chr10 1513790 1514284 - downstream 9 LOC_Os03g53030 expressed protein gene expressed protein chr3 30403490 30403732 + downstream 9 LOC_Os04g46340 hypothetical protein gene hypothetical protein chr4 27286217 27288745 + downstream 9 LOC_Os09g37120 pyridoxal-dependent decarboxylase protein, putative, expressed gene pyridoxal-dependent decarboxylase protein, putative, expressed chr9 21408790 21410016 - downstream 9 LOC_Os02g44010 expressed protein gene expressed protein chr2 26567370 26570830 - downstream 9 LOC_Os11g42270 OsFBX432 - F-box domain containing protein, expressed gene OsFBX432 - F-box domain containing protein, expressed chr11 24995083 24996837 - downstream 9 LOC_Os11g12450 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 6951872 6955510 - downstream 9 LOC_Os02g30350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 18069559 18072271 + downstream 9 LOC_Os01g34374 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 18947776 18955572 - downstream 9 LOC_Os01g37700 hypothetical protein gene hypothetical protein chr1 21076962 21078277 + downstream 9 LOC_Os11g37560 expressed protein gene expressed protein chr11 21709363 21712754 - downstream 9 LOC_Os10g07470 ZOS10-01 - C2H2 zinc finger protein gene ZOS10-01 - C2H2 zinc finger protein chr10 3961281 3967534 - downstream 9 LOC_Os01g15550 expressed protein gene expressed protein chr1 8744873 8745724 - downstream 9 LOC_Os06g13380 hypothetical protein gene hypothetical protein chr6 7366792 7367196 - downstream 9 LOC_Os01g48720 RNA polymerase III subunit RPC82 family protein, putative, expressed gene RNA polymerase III subunit RPC82 family protein, putative, expressed chr1 27937724 27946003 + downstream 9 LOC_Os10g28320 oxidoreductase, aldo/keto reductase family protein, putative, expressed gene oxidoreductase, aldo/keto reductase family protein, putative, expressed chr10 14660276 14665378 + downstream 9 LOC_Os03g46570 protein binding protein, putative, expressed gene protein binding protein, putative, expressed chr3 26356166 26357513 + downstream 9 LOC_Os06g16810 polygalacturonase precursor, putative gene polygalacturonase precursor, putative chr6 9733901 9734545 - downstream 9 LOC_Os08g42160 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 26639049 26643032 - downstream 9 LOC_Os05g48690 transcription factor like protein, putative, expressed gene transcription factor like protein, putative, expressed chr5 27836412 27839857 + downstream 9 LOC_Os05g26200 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 15190650 15192151 - downstream 9 LOC_Os06g46436 photosystem I iron-sulfur center, putative gene photosystem I iron-sulfur center, putative chr6 28182315 28182560 - downstream 9 LOC_Os01g46430 glycosyl transferase, group 1 domain containing protein, expressed gene glycosyl transferase, group 1 domain containing protein, expressed chr1 26419219 26420937 + downstream 9 LOC_Os01g08730 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr1 4362128 4365827 + downstream 9 LOC_Os09g37949 serine/threonine-protein kinase SRPK1, putative, expressed gene serine/threonine-protein kinase SRPK1, putative, expressed chr9 21880614 21884141 - downstream 9 LOC_Os08g27490 conserved hypothetical protein gene conserved hypothetical protein chr8 16773767 16777896 - downstream 9 LOC_Os01g74580 dnaJ homolog subfamily C member, putative, expressed gene dnaJ homolog subfamily C member, putative, expressed chr1 43188112 43192490 + downstream 9 LOC_Os06g09090 glutamate receptor 2.8 precursor, putative, expressed gene glutamate receptor 2.8 precursor, putative, expressed chr6 4570089 4573928 - downstream 9 LOC_Os05g01675 photosystem I P700 chlorophyll a apoprotein A1, putative gene photosystem I P700 chlorophyll a apoprotein A1, putative chr5 406167 408419 - downstream 9 LOC_Os06g17600 cadmium tolerance factor, putative gene cadmium tolerance factor, putative chr6 10212139 10213346 - downstream 9 LOC_Os08g36800 hypothetical protein gene hypothetical protein chr8 23248504 23249007 + downstream 9 LOC_Os08g13170 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 7824145 7831582 - downstream 9 LOC_Os10g38080 OsSub61 - Putative Subtilisin homologue, expressed gene OsSub61 - Putative Subtilisin homologue, expressed chr10 20318119 20320799 - downstream 9 LOC_Os08g35990 hypothetical protein gene hypothetical protein chr8 22682520 22683504 + downstream 9 LOC_Os06g10190 flavin-containing monooxygenase 2, putative gene flavin-containing monooxygenase 2, putative chr6 5215712 5217032 - downstream 9 LOC_Os02g49130 expressed protein gene expressed protein chr2 30038350 30041663 - downstream 9 LOC_Os04g34700 hypothetical protein gene hypothetical protein chr4 20848609 20850806 + downstream 9 LOC_Os11g16800 hypothetical protein gene hypothetical protein chr11 9322751 9323960 + downstream 9 LOC_Os06g30720 hypothetical protein gene hypothetical protein chr6 17815958 17816682 + downstream 9 LOC_Os10g31139 unknown gene unknown chr10 16228170 16228592 - downstream 9 LOC_Os02g14900 1,3-beta-glucan synthase component domain containing protein, expressed gene 1,3-beta-glucan synthase component domain containing protein, expressed chr2 8299856 8317190 + downstream 9 LOC_Os05g35360 beta-galactosidase 7 precursor, putative, expressed gene beta-galactosidase 7 precursor, putative, expressed chr5 20926970 20935753 - downstream 9 LOC_Os01g72480 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr1 42024629 42026943 + downstream 9 LOC_Os02g47300 hypothetical protein gene hypothetical protein chr2 28881319 28881959 + downstream 9 LOC_Os03g49890 hypothetical protein gene hypothetical protein chr3 28438112 28438420 - downstream 9 LOC_Os04g59290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 35069259 35075411 - downstream 9 LOC_Os03g22190 expressed protein gene expressed protein chr3 12717675 12724973 - downstream 9 LOC_Os11g25500 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 14058962 14061079 - downstream 9 LOC_Os10g39340 aspartic proteinase nepenthesin precursor, putative gene aspartic proteinase nepenthesin precursor, putative chr10 20922295 20923488 + downstream 9 LOC_Os09g34160 resistance protein, putative, expressed gene resistance protein, putative, expressed chr9 20162189 20167295 - downstream 9 LOC_Os09g21570 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 13046789 13050121 - downstream 9 LOC_Os01g53640 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 30817898 30822203 + downstream 9 LOC_Os10g05290 tRNA/rRNA methyltransferase, putative, expressed gene tRNA/rRNA methyltransferase, putative, expressed chr10 2613757 2617653 + downstream 9 LOC_Os06g41090 anthranilate phosphoribosyltransferase, putative, expressed gene anthranilate phosphoribosyltransferase, putative, expressed chr6 24554316 24556976 - downstream 9 LOC_Os12g42640 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 26467261 26470961 - downstream 9 LOC_Os07g44050 expressed protein gene expressed protein chr7 26324098 26325649 - downstream 9 LOC_Os08g44060 hypothetical protein gene hypothetical protein chr8 27739829 27740041 - downstream 9 LOC_Os08g30620 hypothetical protein gene hypothetical protein chr8 18869269 18870635 - downstream 9 LOC_Os05g37090 hypothetical protein gene hypothetical protein chr5 21613134 21613634 + downstream 9 LOC_Os01g02870 auxin-induced protein 5NG4, putative, expressed gene auxin-induced protein 5NG4, putative, expressed chr1 1009259 1011410 + downstream 9 LOC_Os12g40970 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 25327069 25328925 - downstream 9 LOC_Os06g38440 hypothetical protein gene hypothetical protein chr6 22776169 22777114 - downstream 9 LOC_Os12g38830 hypothetical protein gene hypothetical protein chr12 23827102 23827452 + downstream 9 LOC_Os08g05000 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr8 2562789 2564718 + downstream 9 LOC_Os11g01470 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 271765 279565 + downstream 9 LOC_Os02g09250 cytochrome P450 71D10, putative, expressed gene cytochrome P450 71D10, putative, expressed chr2 4765148 4767212 + downstream 9 LOC_Os08g42560 tRNA synthetase class II core domain containing protein, expressed gene tRNA synthetase class II core domain containing protein, expressed chr8 26897622 26901920 + downstream 9 LOC_Os04g30950 hypothetical protein gene hypothetical protein chr4 18328409 18329244 - downstream 9 LOC_Os02g41940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 25191225 25192862 - downstream 9 LOC_Os04g36660 calmodulin binding protein, putative, expressed gene calmodulin binding protein, putative, expressed chr4 21964640 21970277 + downstream 9 LOC_Os09g18440 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr9 11303719 11305889 - downstream 9 LOC_Os10g27400 conserved hypothetical protein gene conserved hypothetical protein chr10 14378484 14379014 + downstream 9 LOC_Os10g37920 MATE efflux family protein, putative, expressed gene MATE efflux family protein, putative, expressed chr10 20235851 20237470 + downstream 9 LOC_Os02g53080 expressed protein gene expressed protein chr2 32468165 32470314 - downstream 9 LOC_Os04g02560 expressed protein gene expressed protein chr4 955016 955593 - downstream 9 LOC_Os08g01280 ACT domain containing protein gene ACT domain containing protein chr8 181970 184301 - downstream 9 LOC_Os04g37440 conserved hypothetical protein gene conserved hypothetical protein chr4 22127136 22127594 - downstream 9 LOC_Os07g48540 hypothetical protein gene hypothetical protein chr7 29029144 29029582 + downstream 9 LOC_Os01g13140 WD domain, G-beta repeat domain containing protein gene WD domain, G-beta repeat domain containing protein chr1 7306881 7308906 - downstream 9 LOC_Os06g46435 NADPH-dependent oxidoreductase, putative, expressed gene NADPH-dependent oxidoreductase, putative, expressed chr6 28180693 28182195 - downstream 9 LOC_Os07g06380 peroxidase precursor, putative gene peroxidase precursor, putative chr7 3100712 3103242 + downstream 9 LOC_Os12g16000 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 9111404 9116943 - downstream 9 LOC_Os08g44660 EF hand family protein, putative, expressed gene EF hand family protein, putative, expressed chr8 28074814 28077093 + downstream 9 LOC_Os04g41430 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 24372114 24373475 + downstream 9 LOC_Os03g52350 PIII2 - Proteinase inhibitor II family protein precursor, putative gene PIII2 - Proteinase inhibitor II family protein precursor, putative chr3 30059735 30063793 - downstream 9 LOC_Os04g54730 hypothetical protein gene hypothetical protein chr4 32364044 32366115 - downstream 9 LOC_Os01g03240 conserved hypothetical protein gene conserved hypothetical protein chr1 1312236 1313274 + downstream 9 LOC_Os11g41950 hypothetical protein gene hypothetical protein chr11 24764209 24764763 - downstream 9 LOC_Os01g72450 DNA binding protein, putative, expressed gene DNA binding protein, putative, expressed chr1 42011694 42012538 + downstream 9 LOC_Os04g31750 hypothetical protein gene hypothetical protein chr4 18831683 18832505 - downstream 9 LOC_Os11g15400 retrotransposon protein, putative, Ty1-copia subclass, expressed gene retrotransposon protein, putative, Ty1-copia subclass, expressed chr11 8717171 8722743 - downstream 9 LOC_Os06g09800 hypothetical protein gene hypothetical protein chr6 4994259 4994861 - downstream 9 LOC_Os12g04130 OsFBO23 - F-box and other domain containing protein gene OsFBO23 - F-box and other domain containing protein chr12 1731193 1733980 + downstream 9 LOC_Os05g29140 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 17061771 17065997 + downstream 9 LOC_Os12g28080 hypothetical protein gene hypothetical protein chr12 16578237 16578566 - downstream 9 LOC_Os02g29180 conserved hypothetical protein gene conserved hypothetical protein chr2 17294959 17295477 + downstream 9 LOC_Os05g27790 membrane associated DUF588 domain containing protein, putative, expressed gene membrane associated DUF588 domain containing protein, putative, expressed chr5 16126601 16129297 - downstream 9 LOC_Os06g46460 expressed protein gene expressed protein chr6 28202819 28203372 + downstream 9 LOC_Os08g34450 conserved hypothetical protein gene conserved hypothetical protein chr8 21622013 21622726 - downstream 9 LOC_Os07g26120 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 14998426 15004473 + downstream 9 LOC_Os04g57060 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 33822973 33827939 - downstream 9 LOC_Os09g11950 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 6726667 6729490 - downstream 9 LOC_Os11g05920 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 2775341 2780748 - downstream 9 LOC_Os12g04520 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr12 1921206 1925697 - downstream 9 LOC_Os09g10270 SKP1-like protein 1B, putative gene SKP1-like protein 1B, putative chr9 5593786 5594304 - downstream 9 LOC_Os05g36994 expressed protein gene expressed protein chr5 21551072 21553607 + downstream 9 LOC_Os01g70370 serine palmitoyltransferase 2, putative, expressed gene serine palmitoyltransferase 2, putative, expressed chr1 40765875 40770571 - downstream 9 LOC_Os06g44680 hypothetical protein gene hypothetical protein chr6 26971932 26972545 - downstream 9 LOC_Os02g35290 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 21200570 21205947 - downstream 9 LOC_Os07g10930 hypothetical protein gene hypothetical protein chr7 5985460 5985882 - downstream 9 LOC_Os04g39580 hypothetical protein gene hypothetical protein chr4 23411319 23411699 + downstream 9 LOC_Os07g36050 hypothetical protein gene hypothetical protein chr7 21560524 21561033 - downstream 9 LOC_Os09g08270 nodulin MtN3 family protein, putative gene nodulin MtN3 family protein, putative chr9 4275123 4275419 - downstream 9 LOC_Os08g26360 expressed protein gene expressed protein chr8 16067579 16068768 - downstream 9 LOC_Os05g11460 hypothetical protein gene hypothetical protein chr5 6483995 6486169 - downstream 9 LOC_Os10g08430 hypothetical protein gene hypothetical protein chr10 4597569 4598030 - downstream 9 LOC_Os01g52980 OsFBX23 - F-box domain containing protein, expressed gene OsFBX23 - F-box domain containing protein, expressed chr1 30452309 30454324 - downstream 9 LOC_Os04g35680 U-box domain containing protein, expressed gene U-box domain containing protein, expressed chr4 21573712 21575607 + downstream 9 LOC_Os06g42110 expressed protein gene expressed protein chr6 25290551 25291059 + downstream 9 LOC_Os07g14630 glucosyltransferase-11, putative gene glucosyltransferase-11, putative chr7 8346725 8348435 - downstream 9 LOC_Os02g56710 hypothetical protein gene hypothetical protein chr2 34761583 34761991 - downstream 9 LOC_Os02g20550 hypothetical protein gene hypothetical protein chr2 12123596 12123874 + downstream 9 LOC_Os04g53280 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr4 31548926 31555015 - downstream 9 LOC_Os09g11005 expressed protein gene expressed protein chr9 6092906 6094176 - downstream 9 LOC_Os03g19170 GCRP7 - Glycine and cysteine rich family protein precursor, expressed gene GCRP7 - Glycine and cysteine rich family protein precursor, expressed chr3 10747467 10748469 - downstream 9 LOC_Os04g29280 hypothetical protein gene hypothetical protein chr4 17192366 17192774 + downstream 9 LOC_Os04g42940 expressed protein gene expressed protein chr4 25215117 25216388 - downstream 9 LOC_Os11g30350 PB1 domain containing protein, expressed gene PB1 domain containing protein, expressed chr11 17150454 17151892 - downstream 9 LOC_Os09g26004 expressed protein gene expressed protein chr9 15627324 15630558 - downstream 9 LOC_Os11g44040 hypothetical protein gene hypothetical protein chr11 26145723 26147516 + downstream 9 LOC_Os05g11310 hypothetical protein gene hypothetical protein chr5 6383321 6385472 + downstream 9 LOC_Os11g14700 hypothetical protein gene hypothetical protein chr11 8279102 8279581 + downstream 9 LOC_Os02g54290 BRUSHY 1, putative gene BRUSHY 1, putative chr2 33289993 33290331 - downstream 9 LOC_Os04g39760 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 23506772 23509803 - downstream 9 LOC_Os12g10630 ZF-HD protein dimerisation region containing protein, expressed gene ZF-HD protein dimerisation region containing protein, expressed chr12 5673238 5676458 + downstream 9 LOC_Os12g35590 expressed protein gene expressed protein chr12 21606948 21608267 - downstream 9 LOC_Os06g23040 expressed protein gene expressed protein chr6 13439853 13441507 + downstream 9 LOC_Os01g28200 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 15797976 15800719 + downstream 9 LOC_Os04g33710 expressed protein gene expressed protein chr4 20239220 20239966 - downstream 9 LOC_Os01g43729 unknown gene unknown chr1 25057675 25058331 - downstream 9 LOC_Os02g41600 hypothetical protein gene hypothetical protein chr2 24946686 24947233 - downstream 9 LOC_Os01g61510 ammonium transporter protein, putative, expressed gene ammonium transporter protein, putative, expressed chr1 35584822 35587334 - downstream 9 LOC_Os11g31705 expressed protein gene expressed protein chr11 18094094 18103763 - downstream 9 LOC_Os05g47640 threonine synthase, chloroplast precursor, putative, expressed gene threonine synthase, chloroplast precursor, putative, expressed chr5 27227914 27229941 + downstream 9 LOC_Os04g24310 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 13924923 13926738 - downstream 9 LOC_Os06g04480 expressed protein gene expressed protein chr6 1921430 1922595 + downstream 9 LOC_Os10g01630 hypothetical protein gene hypothetical protein chr10 423848 424589 - downstream 9 LOC_Os01g27490 leucoanthocyanidin dioxygenase, putative, expressed gene leucoanthocyanidin dioxygenase, putative, expressed chr1 15345323 15346915 - downstream 9 LOC_Os08g42470 BEE 1, putative, expressed gene BEE 1, putative, expressed chr8 26838350 26840585 - downstream 9 LOC_Os01g66560 signal recognition particle 72 kDa protein, putative, expressed gene signal recognition particle 72 kDa protein, putative, expressed chr1 38649475 38653685 + downstream 9 LOC_Os03g49790 pattern formation protein EMB30, putative gene pattern formation protein EMB30, putative chr3 28338486 28339772 + downstream 9 LOC_Os03g61640 ZOS3-23 - C2H2 zinc finger protein, expressed gene ZOS3-23 - C2H2 zinc finger protein, expressed chr3 34934472 34937525 + downstream 9 LOC_Os01g70140 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed gene ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed chr1 40594809 40598068 - downstream 9 LOC_Os02g39370 tRNA methyltransferase, putative gene tRNA methyltransferase, putative chr2 23755253 23760009 - downstream 9 LOC_Os09g36130 expressed protein gene expressed protein chr9 20798654 20802452 - downstream 9 LOC_Os08g04530 conserved hypothetical protein gene conserved hypothetical protein chr8 2237584 2238658 + downstream 9 LOC_Os07g05470 AIR9 protein, putative, expressed gene AIR9 protein, putative, expressed chr7 2538294 2544734 + downstream 9 LOC_Os11g31090 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr11 17626823 17629496 + downstream 9 LOC_Os08g41020 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 25941067 25945456 - downstream 9 LOC_Os07g47430 expressed protein gene expressed protein chr7 28358328 28359347 + downstream 9 LOC_Os05g27000 expressed protein gene expressed protein chr5 15641166 15643420 + downstream 9 LOC_Os07g15150 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 8695377 8700755 - downstream 9 LOC_Os02g49980 ADP-ribosylation factor, putative, expressed gene ADP-ribosylation factor, putative, expressed chr2 30527552 30530510 - downstream 9 LOC_Os01g73200 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr1 42440616 42441914 + downstream 9 LOC_Os06g05190 BRCA1 C Terminus domain containing protein, expressed gene BRCA1 C Terminus domain containing protein, expressed chr6 2328884 2333475 + downstream 9 LOC_Os01g34260 hypothetical protein gene hypothetical protein chr1 18887107 18887340 - downstream 9 LOC_Os05g19590 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 11413134 11417643 - downstream 9 LOC_Os01g09280 myb-related transcription activator, putative, expressed gene myb-related transcription activator, putative, expressed chr1 4713468 4717746 - downstream 9 LOC_Os03g58340 expressed protein gene expressed protein chr3 33233136 33237680 + downstream 9 LOC_Os09g15490 hypothetical protein gene hypothetical protein chr9 9482798 9483515 + downstream 9 LOC_Os01g41360 expressed protein gene expressed protein chr1 23401282 23403078 + downstream 9 LOC_Os05g32920 hypothetical protein gene hypothetical protein chr5 19223963 19228152 - downstream 9 LOC_Os11g47520 glycosyl hydrolase, putative, expressed gene glycosyl hydrolase, putative, expressed chr11 28206924 28208102 + downstream 9 LOC_Os03g06820 hypothetical protein gene hypothetical protein chr3 3457704 3457937 - downstream 9 LOC_Os07g34130 TBC domain containing protein, expressed gene TBC domain containing protein, expressed chr7 20409558 20417596 + downstream 9 LOC_Os06g16870 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr6 9765795 9769481 + downstream 9 LOC_Os08g33980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 21270495 21273694 + downstream 9 LOC_Os03g61319 RD26, putative gene RD26, putative chr3 34807007 34807957 - downstream 9 LOC_Os02g34210 hypothetical protein gene hypothetical protein chr2 20460825 20462776 + downstream 9 LOC_Os09g27270 ribosomal RNA large subunit methyltransferase J, putative gene ribosomal RNA large subunit methyltransferase J, putative chr9 16579415 16579891 - downstream 9 LOC_Os05g02690 sensitivity to red light reduced protein 1, putative, expressed gene sensitivity to red light reduced protein 1, putative, expressed chr5 956005 957034 + downstream 9 LOC_Os06g46438 NADPH-dependent oxidoreductase, putative gene NADPH-dependent oxidoreductase, putative chr6 28183007 28183312 - downstream 9 LOC_Os02g41850 conserved hypothetical protein gene conserved hypothetical protein chr2 25150680 25155593 + downstream 9 LOC_Os11g36700 glycosyltransferase, putative gene glycosyltransferase, putative chr11 21205535 21206849 + downstream 9 LOC_Os09g24460 expressed protein gene expressed protein chr9 14554402 14557305 + downstream 9 LOC_Os12g08530 conserved hypothetical protein gene conserved hypothetical protein chr12 4323450 4324050 - downstream 9 LOC_Os04g46710 thioesterase family protein, putative gene thioesterase family protein, putative chr4 27509360 27511136 - downstream 9 LOC_Os08g32830 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 20341009 20344296 - downstream 9 LOC_Os04g10880 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 5894491 5897891 - downstream 9 LOC_Os11g41880 potyvirus VPg interacting protein, putative gene potyvirus VPg interacting protein, putative chr11 24715139 24717316 - downstream 9 LOC_Os11g36170 hypothetical protein gene hypothetical protein chr11 20804163 20805524 - downstream 9 LOC_Os09g28920 hypothetical protein gene hypothetical protein chr9 17576912 17577926 + downstream 9 LOC_Os02g32030 elongation factor, putative, expressed gene elongation factor, putative, expressed chr2 18911065 18916199 + downstream 9 LOC_Os02g54180 expressed protein gene expressed protein chr2 33214492 33215291 + downstream 9 LOC_Os07g02390 hypothetical protein gene hypothetical protein chr7 818209 821136 - downstream 9 LOC_Os03g16929 unknown gene unknown chr3 9415580 9415973 + downstream 9 LOC_Os06g18780 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr6 10648541 10658109 + downstream 9 LOC_Os10g26250 no apical meristem protein, putative gene no apical meristem protein, putative chr10 13522237 13523051 + downstream 9 LOC_Os05g11990 TTL1, putative, expressed gene TTL1, putative, expressed chr5 6858598 6862577 + downstream 9 LOC_Os03g44260 conserved hypothetical protein gene conserved hypothetical protein chr3 24880665 24880922 + downstream 9 LOC_Os02g29040 ankyrin repeat domain containing protein, putative, expressed gene ankyrin repeat domain containing protein, putative, expressed chr2 17190218 17198761 - downstream 9 LOC_Os11g07970 OsFBW2 - F-box domain and WD40 repeat containing protein, expressed gene OsFBW2 - F-box domain and WD40 repeat containing protein, expressed chr11 4130231 4136381 - downstream 9 LOC_Os05g34840 hypothetical protein gene hypothetical protein chr5 20620992 20621429 - downstream 9 LOC_Os11g17350 hypothetical protein gene hypothetical protein chr11 9669621 9670097 + downstream 9 LOC_Os10g10410 OsFBX377 - F-box domain containing protein gene OsFBX377 - F-box domain containing protein chr10 5734185 5735435 - downstream 9 LOC_Os03g20970 phospholipid-transporting ATPase 1, putative, expressed gene phospholipid-transporting ATPase 1, putative, expressed chr3 11891846 11896946 - downstream 9 LOC_Os03g12820 ATP8, putative, expressed gene ATP8, putative, expressed chr3 6894176 6897426 + downstream 9 LOC_Os08g37420 hypothetical protein gene hypothetical protein chr8 23708559 23708897 + downstream 9 LOC_Os06g16060 zinc finger, C3HC4 type domain containing protein, expressed gene zinc finger, C3HC4 type domain containing protein, expressed chr6 9136388 9137009 - downstream 9 LOC_Os11g08689 unknown gene unknown chr11 4633832 4635452 - downstream 9 LOC_Os05g34970 hypothetical protein gene hypothetical protein chr5 20710960 20712040 + downstream 9 LOC_Os03g05430 peptidase, putative, expressed gene peptidase, putative, expressed chr3 2681303 2684440 + downstream 9 LOC_Os05g35750 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 21156560 21159402 + downstream 9 LOC_Os11g11230 hypothetical protein gene hypothetical protein chr11 6211942 6212634 - downstream 9 LOC_Os07g41860 DC1 domain-containing protein, putative gene DC1 domain-containing protein, putative chr7 25076123 25076680 + downstream 9 LOC_Os10g02050 hypothetical protein gene hypothetical protein chr10 662594 662881 + downstream 9 LOC_Os06g17890 hypothetical protein gene hypothetical protein chr6 10381005 10382012 + downstream 9 LOC_Os02g20690 speckle-type POZ protein, putative gene speckle-type POZ protein, putative chr2 12191627 12192598 - downstream 9 LOC_Os12g11610 hypothetical protein gene hypothetical protein chr12 6298546 6298752 - downstream 9 LOC_Os11g44540 hypothetical protein gene hypothetical protein chr11 26460846 26461497 + downstream 9 LOC_Os09g32944 OsSPL18 - SBP-box gene family member, expressed gene OsSPL18 - SBP-box gene family member, expressed chr9 19643053 19647823 + downstream 9 LOC_Os10g29410 MBTB53 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain gene MBTB53 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain chr10 15208727 15209932 - downstream 9 LOC_Os07g05820 hydroxyacid oxidase 1, putative, expressed gene hydroxyacid oxidase 1, putative, expressed chr7 2796692 2800365 + downstream 9 LOC_Os07g04440 expressed protein gene expressed protein chr7 1964294 1965342 + downstream 9 LOC_Os07g42380 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr7 25356847 25361773 + downstream 9 LOC_Os05g27080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 15684861 15694913 + downstream 9 LOC_Os03g10200 ethylene-responsive element-binding protein, putative, expressed gene ethylene-responsive element-binding protein, putative, expressed chr3 5174140 5178234 + downstream 9 LOC_Os12g34670 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 21013178 21017370 - downstream 9 LOC_Os01g61530 hypothetical protein gene hypothetical protein chr1 35591990 35592415 + downstream 9 LOC_Os11g33160 conserved hypothetical protein gene conserved hypothetical protein chr11 19161751 19162242 + downstream 9 LOC_Os04g09870 hypothetical protein gene hypothetical protein chr4 5302724 5304517 + downstream 9 LOC_Os04g31600 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 18719682 18723368 + downstream 9 LOC_Os12g40930 hypothetical protein gene hypothetical protein chr12 25304088 25306843 - downstream 9 LOC_Os12g12220 DEFL18 - Defensin and Defensin-like DEFL family gene DEFL18 - Defensin and Defensin-like DEFL family chr12 6709871 6710490 + downstream 9 LOC_Os09g23399 expressed protein gene expressed protein chr9 13906884 13908785 - downstream 9 LOC_Os01g08550 aminoacyl-tRNA synthetase, putative, expressed gene aminoacyl-tRNA synthetase, putative, expressed chr1 4244417 4248851 - downstream 9 LOC_Os11g03830 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr11 1513933 1520408 - downstream 9 LOC_Os04g04680 hypothetical protein gene hypothetical protein chr4 2249206 2250108 + downstream 9 LOC_Os12g33390 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 20159668 20160162 - downstream 9 LOC_Os09g26040 hypothetical protein gene hypothetical protein chr9 15651945 15652250 + downstream 9 LOC_Os01g34540 hypothetical protein gene hypothetical protein chr1 19052854 19053120 - downstream 9 LOC_Os06g13929 unknown gene unknown chr6 7761237 7761499 + downstream 9 LOC_Os05g35680 hypothetical protein gene hypothetical protein chr5 21132166 21133388 - downstream 9 LOC_Os02g55350 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr2 33894920 33902185 + downstream 9 LOC_Os11g46850 wall-associated kinase, putative gene wall-associated kinase, putative chr11 27593090 27593530 + downstream 9 LOC_Os08g30710 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 18934996 18938721 - downstream 9 LOC_Os10g40800 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 21845865 21850126 - downstream 9 LOC_Os05g39530 ribonuclease P family protein, putative, expressed gene ribonuclease P family protein, putative, expressed chr5 23133575 23138906 - downstream 9 LOC_Os11g10580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 5799327 5801702 + downstream 9 LOC_Os09g17640 hypothetical protein gene hypothetical protein chr9 10795067 10795641 - downstream 9 LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed gene synaptonemal complex protein 2, putative, expressed chr4 22398339 22407816 + downstream 9 LOC_Os03g44944 CCR4-NOT transcription factor, putative gene CCR4-NOT transcription factor, putative chr3 25374145 25374801 - downstream 9 LOC_Os11g29830 hypothetical protein gene hypothetical protein chr11 16850349 16850594 + downstream 9 LOC_Os06g06880 Ser/Thr protein phosphatase family protein, putative, expressed gene Ser/Thr protein phosphatase family protein, putative, expressed chr6 3262800 3266309 - downstream 9 LOC_Os01g55930 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr1 32215001 32215324 - downstream 9 LOC_Os02g06725 expressed protein gene expressed protein chr2 3378926 3386410 - downstream 9 LOC_Os04g31559 unknown gene unknown chr4 18702629 18702894 + downstream 9 LOC_Os08g36520 peptidase aspartic family protein, putative gene peptidase aspartic family protein, putative chr8 23059896 23060513 - downstream 9 LOC_Os08g35180 ECAGL4 - ECA1 gametogenesis related family protein precursor, putative gene ECAGL4 - ECA1 gametogenesis related family protein precursor, putative chr8 22173070 22173570 + downstream 9 LOC_Os12g39160 expressed protein gene expressed protein chr12 24053640 24056428 - downstream 9 LOC_Os02g38084 unknown gene unknown chr2 23002791 23005212 - downstream 9 LOC_Os02g34140 hypothetical protein gene hypothetical protein chr2 20411524 20411889 + downstream 9 LOC_Os02g12170 hypothetical protein gene hypothetical protein chr2 6325077 6326357 - downstream 9 LOC_Os01g40280 integral membrane protein, putative, expressed gene integral membrane protein, putative, expressed chr1 22741475 22746140 + downstream 9 LOC_Os01g04740 hypothetical protein gene hypothetical protein chr1 2139865 2141091 - downstream 9 LOC_Os01g11920 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 6470718 6484507 + downstream 9 LOC_Os03g03250 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr3 1384810 1390916 - downstream 9 LOC_Os06g34710 expressed protein gene expressed protein chr6 20168369 20176264 + downstream 9 LOC_Os07g41900 expressed protein gene expressed protein chr7 25099406 25103606 + downstream 9 LOC_Os01g14360 hypothetical protein gene hypothetical protein chr1 8039956 8040210 - downstream 9 LOC_Os03g01770 rhodanese, putative, expressed gene rhodanese, putative, expressed chr3 481917 483761 - downstream 9 LOC_Os06g32520 hypothetical protein gene hypothetical protein chr6 18915542 18915904 - downstream 9 LOC_Os03g06770 hypothetical protein gene hypothetical protein chr3 3442825 3444002 - downstream 9 LOC_Os03g51180 expressed protein gene expressed protein chr3 29275908 29279504 - downstream 9 LOC_Os07g31980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 19017658 19020585 - downstream 9 LOC_Os04g28310 hypothetical protein gene hypothetical protein chr4 16588336 16591571 + downstream 9 LOC_Os03g11930 hypothetical protein gene hypothetical protein chr3 6249429 6250724 - downstream 9 LOC_Os10g18490 cytokinin-O-glucosyltransferase 2, putative, expressed gene cytokinin-O-glucosyltransferase 2, putative, expressed chr10 9317949 9318554 - downstream 9 LOC_Os12g39940 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 24650767 24652855 + downstream 9 LOC_Os11g08959 unknown gene unknown chr11 4751499 4753466 - downstream 9 LOC_Os01g55740 OsRhmbd4 - Putative Rhomboid homologue, expressed gene OsRhmbd4 - Putative Rhomboid homologue, expressed chr1 32093359 32097671 + downstream 9 LOC_Os01g11260 phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed gene phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed chr1 6024074 6028649 + downstream 9 LOC_Os01g21130 expressed protein gene expressed protein chr1 11791447 11792141 + downstream 9 LOC_Os10g09750 conserved hypothetical protein gene conserved hypothetical protein chr10 5291907 5292557 + downstream 9 LOC_Os06g43400 tabersonine 16-hydroxylase, putative gene tabersonine 16-hydroxylase, putative chr6 26088783 26089887 + downstream 9 LOC_Os09g17980 hypothetical protein gene hypothetical protein chr9 10999929 11000465 + downstream 9 LOC_Os03g57820 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 32937211 32940305 + downstream 9 LOC_Os03g49260 lipoxygenase, putative, expressed gene lipoxygenase, putative, expressed chr3 28042495 28046779 + downstream 9 LOC_Os07g31660 conserved hypothetical protein gene conserved hypothetical protein chr7 18805655 18806800 - downstream 9 LOC_Os09g28780 hypothetical protein gene hypothetical protein chr9 17480452 17480742 + downstream 9 LOC_Os02g56850 glutathione reductase, putative, expressed gene glutathione reductase, putative, expressed chr2 34831870 34838075 + downstream 9 LOC_Os05g03830 aminotransferase, putative, expressed gene aminotransferase, putative, expressed chr5 1704939 1707093 + downstream 9 LOC_Os02g03470 tetratricopeptide repeat containing protein, putative, expressed gene tetratricopeptide repeat containing protein, putative, expressed chr2 1412107 1416005 + downstream 9 LOC_Os09g17180 hypothetical protein gene hypothetical protein chr9 10540838 10544059 + downstream 9 LOC_Os01g64410 ATOFP18/OFP18, putative, expressed gene ATOFP18/OFP18, putative, expressed chr1 37380414 37381171 + downstream 9 LOC_Os03g14830 GHMP kinases ATP-binding protein, putative, expressed gene GHMP kinases ATP-binding protein, putative, expressed chr3 8066425 8070764 - downstream 9 LOC_Os06g43470 cytochrome P450 71A9, putative gene cytochrome P450 71A9, putative chr6 26122170 26123153 - downstream 9 LOC_Os03g32430 hypothetical protein gene hypothetical protein chr3 18543015 18543885 + downstream 9 LOC_Os03g29020 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 16470669 16474486 - downstream 9 LOC_Os07g03490 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 1394215 1399932 - downstream 9 LOC_Os08g07690 expressed protein gene expressed protein chr8 4299556 4300473 + downstream 9 LOC_Os07g49090 WD-40 repeat family protein, putative gene WD-40 repeat family protein, putative chr7 29384698 29385612 - downstream 9 LOC_Os10g40840 retrotransposon protein, putative, LINE subclass gene retrotransposon protein, putative, LINE subclass chr10 21887886 21890123 + downstream 9 LOC_Os06g42980 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 25817483 25823638 - downstream 9 LOC_Os05g41830 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 24433918 24439136 - downstream 9 LOC_Os04g52210 terpene synthase, putative, expressed gene terpene synthase, putative, expressed chr4 30834247 30839140 + downstream 9 LOC_Os03g48850 valyl-tRNA synthetase, putative, expressed gene valyl-tRNA synthetase, putative, expressed chr3 27819920 27828226 + downstream 9 LOC_Os05g23380 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr5 13295756 13301911 - downstream 9 LOC_Os09g18520 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed gene oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed chr9 11347301 11348992 - downstream 9 LOC_Os01g46980 vacuolar ATP synthase subunit E, putative, expressed gene vacuolar ATP synthase subunit E, putative, expressed chr1 26810805 26815683 + downstream 9 LOC_Os03g38375 hypothetical protein gene hypothetical protein chr3 21301945 21304639 - downstream 9 LOC_Os01g28520 OsFBX8 - F-box domain containing protein gene OsFBX8 - F-box domain containing protein chr1 15967321 15968526 + downstream 9 LOC_Os01g03330 BBTI3 - Bowman-Birk type bran trypsin inhibitor precursor, expressed gene BBTI3 - Bowman-Birk type bran trypsin inhibitor precursor, expressed chr1 1343557 1345419 - downstream 9 LOC_Os04g27400 terpene synthase, putative gene terpene synthase, putative chr4 16015234 16019797 - downstream 9 LOC_Os10g31159 unknown gene unknown chr10 16248318 16249047 - downstream 9 LOC_Os12g43760 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 27151012 27153132 - downstream 9 LOC_Os06g01470 AGAP000326-PA, putative, expressed gene AGAP000326-PA, putative, expressed chr6 281348 283950 + downstream 9 LOC_Os04g18100 hypothetical protein gene hypothetical protein chr4 9993029 9993346 + downstream 9 LOC_Os03g31810 hypothetical protein gene hypothetical protein chr3 18194983 18196674 + downstream 9 LOC_Os12g36850 pathogenesis-related Bet v I family protein, putative, expressed gene pathogenesis-related Bet v I family protein, putative, expressed chr12 22558115 22559961 + downstream 9 LOC_Os07g04290 alcohol oxidase-related, putative gene alcohol oxidase-related, putative chr7 1894231 1895338 + downstream 9 LOC_Os01g13370 seven in absentia protein family domain containing protein, expressed gene seven in absentia protein family domain containing protein, expressed chr1 7449837 7452683 - downstream 9 LOC_Os01g14514 expressed protein gene expressed protein chr1 8129247 8130090 + downstream 9 LOC_Os01g28089 conserved hypothetical protein gene conserved hypothetical protein chr1 15721789 15723486 - downstream 9 LOC_Os06g11760 expressed protein gene expressed protein chr6 6232101 6232580 + downstream 9 LOC_Os03g19770 glycine-rich cell wall protein, putative gene glycine-rich cell wall protein, putative chr3 11125450 11126070 - downstream 9 LOC_Os04g56320 AAA-type ATPase family protein, putative, expressed gene AAA-type ATPase family protein, putative, expressed chr4 33390036 33394539 - downstream 9 LOC_Os07g43120 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr7 25838990 25842879 - downstream 9 LOC_Os01g11850 hypothetical protein gene hypothetical protein chr1 6401993 6409872 - downstream 9 LOC_Os04g33520 RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed gene RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed chr4 20108405 20110022 + downstream 9 LOC_Os04g33160 hypothetical protein gene hypothetical protein chr4 19895850 19896248 - downstream 9 LOC_Os06g22110 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 12835897 12836437 + downstream 9 LOC_Os12g29714 hypothetical protein gene hypothetical protein chr12 17720777 17721313 - downstream 9 LOC_Os06g40860 pentatricopeptide, putative, expressed gene pentatricopeptide, putative, expressed chr6 24368838 24371851 - downstream 9 LOC_Os09g35920 mediator of RNA polymerase II transcription subunit 10, putative, expressed gene mediator of RNA polymerase II transcription subunit 10, putative, expressed chr9 20673350 20678159 - downstream 9 LOC_Os03g02750 OsSub25 - Putative Subtilisin homologue, expressed gene OsSub25 - Putative Subtilisin homologue, expressed chr3 1032959 1035669 - downstream 9 LOC_Os10g36830 transmembrane and coiled-coil domain-containing protein 4, putative, expressed gene transmembrane and coiled-coil domain-containing protein 4, putative, expressed chr10 19644238 19648615 - downstream 9 LOC_Os08g35480 cupin superfamily protein, putative, expressed gene cupin superfamily protein, putative, expressed chr8 22355759 22358356 + downstream 9 LOC_Os03g18850 pathogenesis-related Bet v I family protein, putative, expressed gene pathogenesis-related Bet v I family protein, putative, expressed chr3 10561147 10562195 + downstream 9 LOC_Os05g32290 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr5 18760618 18766281 - downstream 9 LOC_Os12g43630 lactate/malate dehydrogenase, putative, expressed gene lactate/malate dehydrogenase, putative, expressed chr12 27061046 27065750 - downstream 9 LOC_Os03g51750 hypothetical protein gene hypothetical protein chr3 29669650 29670138 + downstream 9 LOC_Os02g39240 cyclin, putative gene cyclin, putative chr2 23699789 23700991 + downstream 9 LOC_Os08g09400 hypothetical protein gene hypothetical protein chr8 5449894 5450259 + downstream 9 LOC_Os03g41080 seed maturation protein PM23, putative, expressed gene seed maturation protein PM23, putative, expressed chr3 22825915 22831506 + downstream 9 LOC_Os03g37760 hypothetical protein gene hypothetical protein chr3 20935632 20936077 + downstream 9 LOC_Os02g34000 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 20288050 20291354 - downstream 9 LOC_Os02g27900 hypothetical protein gene hypothetical protein chr2 16508771 16509758 + downstream 9 LOC_Os03g46350 transcription factor, putative gene transcription factor, putative chr3 26214953 26216082 + downstream 9 LOC_Os07g18750 LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 11089526 11090273 + downstream 9 LOC_Os03g61310 receptor-like protein kinase, putative, expressed gene receptor-like protein kinase, putative, expressed chr3 34802947 34806112 + downstream 9 LOC_Os12g26160 hypothetical protein gene hypothetical protein chr12 15240051 15242128 - downstream 9 LOC_Os02g53270 expressed protein gene expressed protein chr2 32596270 32605203 + downstream 9 LOC_Os02g33720 RING-H2 finger protein, putative, expressed gene RING-H2 finger protein, putative, expressed chr2 20112353 20112961 + downstream 9 LOC_Os09g19490 hypothetical protein gene hypothetical protein chr9 11661543 11661995 + downstream 9 LOC_Os09g16800 hypothetical protein gene hypothetical protein chr9 10269182 10269600 - downstream 9 LOC_Os02g46159 unknown gene unknown chr2 28123823 28124520 - downstream 9 LOC_Os09g09210 expressed protein gene expressed protein chr9 4928366 4931323 - downstream 9 LOC_Os12g24510 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 13988934 13992563 + downstream 9 LOC_Os03g46850 hypothetical protein gene hypothetical protein chr3 26496220 26497558 + downstream 9 LOC_Os01g43250 WD domain, G-beta repeat domain containing protein, expressed gene WD domain, G-beta repeat domain containing protein, expressed chr1 24702727 24707867 - downstream 9 LOC_Os01g07670 hypothetical protein gene hypothetical protein chr1 3688940 3691705 - downstream 9 LOC_Os03g26980 hypothetical protein gene hypothetical protein chr3 15432821 15433135 - downstream 9 LOC_Os02g57800 PPR repeat containing protein, expressed gene PPR repeat containing protein, expressed chr2 35392089 35397227 - downstream 9 LOC_Os03g45350 hypothetical protein gene hypothetical protein chr3 25602783 25603106 + downstream 9 LOC_Os01g58660 LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL29 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr1 33910254 33910945 + downstream 9 LOC_Os07g17320 hypothetical protein gene hypothetical protein chr7 10229091 10229963 - downstream 9 LOC_Os10g18510 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed chr10 9321985 9324321 - downstream 9 LOC_Os04g49250 UDP-glucose/GDP-mannose dehydrogenase family, central domain containing protein, expressed gene UDP-glucose/GDP-mannose dehydrogenase family, central domain containing protein, expressed chr4 29205987 29207625 + downstream 9 LOC_Os06g02920 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 1073319 1074518 + downstream 9 LOC_Os01g72800 signal recognition particle receptor, putative, expressed gene signal recognition particle receptor, putative, expressed chr1 42233540 42236414 - downstream 9 LOC_Os11g07060 receptor protein kinase CLAVATA1 precursor, putative, expressed gene receptor protein kinase CLAVATA1 precursor, putative, expressed chr11 3512916 3518114 + downstream 9 LOC_Os02g38820 expressed protein gene expressed protein chr2 23460100 23462202 - downstream 9 LOC_Os05g13680 hypothetical protein gene hypothetical protein chr5 7580437 7581942 + downstream 9 LOC_Os03g64130 avr9/Cf-9 rapidly elicited protein, putative, expressed gene avr9/Cf-9 rapidly elicited protein, putative, expressed chr3 36231982 36233739 - downstream 9 LOC_Os01g03300 seven in absentia protein family protein gene seven in absentia protein family protein chr1 1334864 1336407 + downstream 9 LOC_Os11g45250 ribonucleases P/MRP protein subunit POP1 containing protein, expressed gene ribonucleases P/MRP protein subunit POP1 containing protein, expressed chr11 26911903 26916820 - downstream 9 LOC_Os07g40986 NAD dependent epimerase/dehydratase family protein, putative, expressed gene NAD dependent epimerase/dehydratase family protein, putative, expressed chr7 24516979 24527001 - downstream 9 LOC_Os02g19340 conserved hypothetical protein gene conserved hypothetical protein chr2 11301327 11301638 + downstream 9 LOC_Os04g45010 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed gene OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed chr4 26435890 26437456 - downstream 9 LOC_Os01g45620 CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed gene CGMC_MAPKCMGC_2.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed chr1 25916579 25921934 - downstream 9 LOC_Os03g47930 expressed protein gene expressed protein chr3 27231490 27244021 + downstream 9 LOC_Os11g40920 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr11 24024090 24033599 - downstream 9 LOC_Os06g23380 IQ calmodulin-binding motif family protein, putative gene IQ calmodulin-binding motif family protein, putative chr6 13646635 13647353 + downstream 9 LOC_Os01g14840 ZOS1-06 - C2H2 zinc finger protein, expressed gene ZOS1-06 - C2H2 zinc finger protein, expressed chr1 8296586 8301407 + downstream 9 LOC_Os05g36100 AP2 domain containing protein, expressed gene AP2 domain containing protein, expressed chr5 21341995 21346473 + downstream 9 LOC_Os01g57530 hypothetical protein gene hypothetical protein chr1 33236075 33236290 - downstream 9 LOC_Os12g39860 phosphoribosyl transferase, putative, expressed gene phosphoribosyl transferase, putative, expressed chr12 24603362 24606304 - downstream 9 LOC_Os01g13010 hypothetical protein gene hypothetical protein chr1 7235012 7235450 - downstream 9 LOC_Os11g02040 hypothetical protein gene hypothetical protein chr11 545279 547231 - downstream 9 LOC_Os07g03310 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 1327908 1333629 - downstream 9 LOC_Os11g08230 DEFL46 - Defensin and Defensin-like DEFL family gene DEFL46 - Defensin and Defensin-like DEFL family chr11 4315098 4321447 - downstream 9 LOC_Os04g54890 hypothetical protein gene hypothetical protein chr4 32463070 32467617 - downstream 9 LOC_Os05g30790 CW-type Zinc Finger, putative gene CW-type Zinc Finger, putative chr5 17795782 17804675 - downstream 9 LOC_Os12g30740 hypothetical protein gene hypothetical protein chr12 18432785 18433152 + downstream 9 LOC_Os03g45194 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed gene oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed chr3 25515789 25523301 - downstream 9 LOC_Os01g01970 expressed protein gene expressed protein chr1 523579 527002 - downstream 9 LOC_Os08g37630 elastin precursor, putative gene elastin precursor, putative chr8 23845134 23845727 - downstream 9 LOC_Os04g34850 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 20960282 20964774 + downstream 9 LOC_Os10g39170 peroxidase precursor, putative, expressed gene peroxidase precursor, putative, expressed chr10 20828611 20830821 + downstream 9 LOC_Os12g02720 DUF567 domain containing protein, putative, expressed gene DUF567 domain containing protein, putative, expressed chr12 953452 954661 - downstream 9 LOC_Os12g42660 AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed gene AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed chr12 26473835 26479946 + downstream 9 LOC_Os02g55120 translation initiation factor IF-3, putative, expressed gene translation initiation factor IF-3, putative, expressed chr2 33753097 33756764 - downstream 9 LOC_Os02g38494 protein phosphatase 2C, putative gene protein phosphatase 2C, putative chr2 23273999 23279506 + downstream 9 LOC_Os10g32070 GATA zinc finger domain containing protein gene GATA zinc finger domain containing protein chr10 16776177 16777923 - downstream 9 LOC_Os05g32760 BZIP protein, putative, expressed gene BZIP protein, putative, expressed chr5 19115850 19121223 + downstream 9 LOC_Os04g10214 expressed protein gene expressed protein chr4 5517354 5518219 + downstream 9 LOC_Os06g11690 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 6196207 6196577 + downstream 9 LOC_Os08g02250 IQ calmodulin-binding motif domain containing protein, expressed gene IQ calmodulin-binding motif domain containing protein, expressed chr8 794186 796590 - downstream 9 LOC_Os11g04740 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed gene FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed chr11 2015624 2020096 - downstream 9 LOC_Os01g07650 hypothetical protein gene hypothetical protein chr1 3681143 3681364 + downstream 9 LOC_Os08g20720 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr8 12447398 12453070 - downstream 9 LOC_Os04g46680 ZOS4-10 - C2H2 zinc finger protein, expressed gene ZOS4-10 - C2H2 zinc finger protein, expressed chr4 27490117 27491504 + downstream 9 LOC_Os09g26440 expressed protein gene expressed protein chr9 15979183 15980138 - downstream 9 LOC_Os07g13080 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 7495014 7497808 + downstream 9 LOC_Os05g50030 conserved hypothetical protein gene conserved hypothetical protein chr5 28619464 28621467 + downstream 9 LOC_Os05g51070 inactive receptor kinase At2g26730 precursor, putative, expressed gene inactive receptor kinase At2g26730 precursor, putative, expressed chr5 29244670 29249036 + downstream 9 LOC_Os09g35580 conserved hypothetical protein gene conserved hypothetical protein chr9 20450238 20450736 + downstream 9 LOC_Os01g67980 cysteine proteinase EP-B 1 precursor, putative, expressed gene cysteine proteinase EP-B 1 precursor, putative, expressed chr1 39500287 39501935 + downstream 9 LOC_Os08g33790 hypothetical protein gene hypothetical protein chr8 21133264 21133473 - downstream 9 LOC_Os02g53559 unknown gene unknown chr2 32764474 32764597 - downstream 9 LOC_Os08g40120 conserved hypothetical protein gene conserved hypothetical protein chr8 25392625 25394918 + downstream 9 LOC_Os02g27260 hypothetical protein gene hypothetical protein chr2 16041521 16042750 - downstream 9 LOC_Os07g47000 conserved hypothetical protein gene conserved hypothetical protein chr7 28077081 28078799 - downstream 9 LOC_Os11g08740 hypothetical protein gene hypothetical protein chr11 4649403 4649678 - downstream 9 LOC_Os04g28560 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 16735903 16741573 - downstream 9 LOC_Os03g30519 expressed protein gene expressed protein chr3 17408801 17411764 - downstream 9 LOC_Os09g15180 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr9 9214022 9218387 + downstream 9 LOC_Os12g31190 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr12 18748084 18754194 - downstream 9 LOC_Os01g19150 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed gene CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed chr1 10821559 10826133 + downstream 9 LOC_Os03g08300 glycosyl transferase, group 1 domain containing protein, expressed gene glycosyl transferase, group 1 domain containing protein, expressed chr3 4222432 4227470 - downstream 9 LOC_Os02g10380 Regulator of chromosome condensation domain containing protein, expressed gene Regulator of chromosome condensation domain containing protein, expressed chr2 5465521 5468118 - downstream 9 LOC_Os01g12630 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 6953748 6954074 - downstream 9 LOC_Os09g07340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 3649452 3652733 - downstream 9 LOC_Os06g43290 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr6 26011705 26015703 + downstream 9 LOC_Os12g03899 major facilitator superfamily antiporter, putative, expressed gene major facilitator superfamily antiporter, putative, expressed chr12 1605073 1619845 - downstream 9 LOC_Os06g37210 hypothetical protein gene hypothetical protein chr6 21980417 21980941 + downstream 9 LOC_Os03g06950 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed gene ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed chr3 3539147 3549710 - downstream 9 LOC_Os12g24650 leucine aminopeptidase, chloroplast precursor, putative, expressed gene leucine aminopeptidase, chloroplast precursor, putative, expressed chr12 14106628 14111848 + downstream 9 LOC_Os07g04970 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr7 2186379 2187940 - downstream 9 LOC_Os11g47660 conserved hypothetical protein gene conserved hypothetical protein chr11 28256599 28257710 + downstream 9 LOC_Os10g11270 sulfotransferase domain containing protein, expressed gene sulfotransferase domain containing protein, expressed chr10 6267683 6270085 - downstream 9 LOC_Os01g10750 hypothetical protein gene hypothetical protein chr1 5749067 5749435 + downstream 9 LOC_Os05g13480 S-adenosylmethionine decarboxylase proenzyme, putative gene S-adenosylmethionine decarboxylase proenzyme, putative chr5 7476410 7476982 + downstream 9 LOC_Os01g73710 RCLEA3 - Root cap and Late embryogenesis related family protein precursor, putative gene RCLEA3 - Root cap and Late embryogenesis related family protein precursor, putative chr1 42703238 42704331 - downstream 9 LOC_Os11g45530 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr11 27091675 27095850 - downstream 9 LOC_Os08g13300 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 7901670 7906774 + downstream 9 LOC_Os12g18400 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 10641530 10647056 - downstream 9 LOC_Os08g37920 ZOS8-09 - C2H2 zinc finger protein, expressed gene ZOS8-09 - C2H2 zinc finger protein, expressed chr8 24012309 24017941 + downstream 9 LOC_Os01g43130 DEAD/DEAH box helicase, putative, expressed gene DEAD/DEAH box helicase, putative, expressed chr1 24601181 24604484 + downstream 9 LOC_Os07g40320 vesicle transport protein GOT1B, putative, expressed gene vesicle transport protein GOT1B, putative, expressed chr7 24176408 24181844 + downstream 9 LOC_Os01g57220 secretory carrier-associated membrane protein, putative, expressed gene secretory carrier-associated membrane protein, putative, expressed chr1 33058143 33064348 + downstream 9 LOC_Os09g38920 thiol protease SEN102 precursor, putative, expressed gene thiol protease SEN102 precursor, putative, expressed chr9 22351167 22353173 - downstream 9 LOC_Os02g49440 dof zinc finger domain containing protein, putative, expressed gene dof zinc finger domain containing protein, putative, expressed chr2 30201095 30202437 - downstream 9 LOC_Os05g34440 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 20339197 20342982 - downstream 9 LOC_Os02g48040 hypothetical protein gene hypothetical protein chr2 29399394 29401166 - downstream 9 LOC_Os11g08225 conserved hypothetical protein gene conserved hypothetical protein chr11 4314656 4318262 - downstream 9 LOC_Os08g10304 expressed protein gene expressed protein chr8 6005496 6006077 - downstream 9 LOC_Os05g14460 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 8166873 8170573 + downstream 9 LOC_Os07g34830 ankyrin repeat family protein, putative, expressed gene ankyrin repeat family protein, putative, expressed chr7 20873275 20875730 + downstream 9 LOC_Os12g16580 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 9486006 9487648 + downstream 9 LOC_Os08g36080 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr8 22732079 22735408 - downstream 9 LOC_Os09g12950 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr9 7466242 7468075 - downstream 9 LOC_Os09g36250 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr9 20914820 20919327 - downstream 9 LOC_Os12g44010 purple acid phosphatase precursor, putative, expressed gene purple acid phosphatase precursor, putative, expressed chr12 27266680 27269114 - downstream 9 LOC_Os06g47150 auxin response factor 18, putative, expressed gene auxin response factor 18, putative, expressed chr6 28585447 28589360 + downstream 9 LOC_Os04g43150 nuclear transport factor 2, putative, expressed gene nuclear transport factor 2, putative, expressed chr4 25358184 25364453 + downstream 9 LOC_Os08g34520 hypothetical protein gene hypothetical protein chr8 21662832 21663108 - downstream 9 LOC_Os10g05840 POEI6 - Pollen Ole e I allergen and extensin family protein precursor, expressed gene POEI6 - Pollen Ole e I allergen and extensin family protein precursor, expressed chr10 2949182 2950066 - downstream 9 LOC_Os04g44270 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr4 26038374 26040972 + downstream 9 LOC_Os08g02150 a_IG002N01.7, putative, expressed gene a_IG002N01.7, putative, expressed chr8 719518 720865 - downstream 9 LOC_Os09g39080 hypothetical protein gene hypothetical protein chr9 22432947 22433195 - downstream 9 LOC_Os05g51330 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 29378119 29381145 - downstream 9 LOC_Os03g53320 hypothetical protein gene hypothetical protein chr3 30595774 30596124 - downstream 9 LOC_Os09g23180 hypothetical protein gene hypothetical protein chr9 13740074 13740472 - downstream 9 LOC_Os01g65290 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr1 37880361 37882864 - downstream 9 LOC_Os03g07920 expressed protein gene expressed protein chr3 4036979 4038505 - downstream 9 LOC_Os06g02028 eyes absent homolog 4, putative, expressed gene eyes absent homolog 4, putative, expressed chr6 586544 591230 + downstream 9 LOC_Os01g33900 conserved hypothetical protein gene conserved hypothetical protein chr1 18648975 18649205 + downstream 9 LOC_Os08g35230 hypothetical protein gene hypothetical protein chr8 22232246 22232737 + downstream 9 LOC_Os02g27150 expressed protein gene expressed protein chr2 15975786 15976337 - downstream 9 LOC_Os03g54150 expressed protein gene expressed protein chr3 31020366 31025454 + downstream 9 LOC_Os10g31690 glycine-rich cell wall structural protein 2 precursor, putative gene glycine-rich cell wall structural protein 2 precursor, putative chr10 16542611 16543189 - downstream 9 LOC_Os02g01280 T-complex protein, putative, expressed gene T-complex protein, putative, expressed chr2 158662 163732 + downstream 9 LOC_Os09g15220 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr9 9237164 9242848 + downstream 9 LOC_Os04g41670 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr4 24519531 24523159 + downstream 9 LOC_Os04g56070 COP9 signalosome complex subunit 5b, putative, expressed gene COP9 signalosome complex subunit 5b, putative, expressed chr4 33209374 33212861 + downstream 9 LOC_Os02g13180 SKP1, putative, expressed gene SKP1, putative, expressed chr2 7024790 7025386 + downstream 9 LOC_Os12g42670 expressed protein gene expressed protein chr12 26480146 26481035 - downstream 9 LOC_Os06g13180 metalloendoproteinase 1 precursor, putative, expressed gene metalloendoproteinase 1 precursor, putative, expressed chr6 7223943 7225418 + downstream 9 LOC_Os04g53700 zinc finger protein, putative, expressed gene zinc finger protein, putative, expressed chr4 31817613 31822220 - downstream 9 LOC_Os08g24434 expressed protein gene expressed protein chr8 14757570 14763552 - downstream 9 LOC_Os05g07270 DUF260 domain containing protein, putative gene DUF260 domain containing protein, putative chr5 3843751 3845457 - downstream 9 LOC_Os08g33960 hypothetical protein gene hypothetical protein chr8 21262371 21263101 + downstream 9 LOC_Os07g09260 unknown gene unknown chr7 4850782 4851430 - downstream 9 LOC_Os06g20890 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr6 12073390 12074748 - downstream 9 LOC_Os01g49830 B3 DNA binding domain containing protein, expressed gene B3 DNA binding domain containing protein, expressed chr1 28618439 28620073 - downstream 9 LOC_Os06g50400 expansin precursor, putative, expressed gene expansin precursor, putative, expressed chr6 30519193 30520383 + downstream 9 LOC_Os09g34240 hypothetical protein gene hypothetical protein chr9 20218376 20219892 + downstream 9 LOC_Os12g27096 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr12 15878333 15890592 - downstream 9 LOC_Os01g55850 expressed protein gene expressed protein chr1 32164396 32164752 + downstream 9 LOC_Os01g53870 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr1 30966603 30968936 + downstream 9 LOC_Os07g44070 pectinacetylesterase domain containing protein, expressed gene pectinacetylesterase domain containing protein, expressed chr7 26339134 26343363 + downstream 9 LOC_Os07g05020 expressed protein gene expressed protein chr7 2211602 2214479 + downstream 9 LOC_Os09g25360 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 15190325 15192507 + downstream 9 LOC_Os05g48300 purine permease, putative, expressed gene purine permease, putative, expressed chr5 27627359 27628796 - downstream 9 LOC_Os02g36505 expressed protein gene expressed protein chr2 22048069 22048991 - downstream 9 LOC_Os08g02490 AT hook motif domain containing protein, expressed gene AT hook motif domain containing protein, expressed chr8 1006219 1010067 + downstream 9 LOC_Os01g51320 peroxisomal N-acetyl-spermine/spermidine oxidase precursor, putative, expressed gene peroxisomal N-acetyl-spermine/spermidine oxidase precursor, putative, expressed chr1 29512239 29513873 - downstream 9 LOC_Os06g17700 embryogenesis transmembrane protein, putative gene embryogenesis transmembrane protein, putative chr6 10278630 10279285 - downstream 9 LOC_Os12g27320 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 16046753 16047640 - downstream 9 LOC_Os07g32600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed gene glucan endo-1,3-beta-glucosidase precursor, putative, expressed chr7 19435906 19441783 + downstream 9 LOC_Os01g74152 haloacid dehalogenase-like hydrolase family protein, putative, expressed gene haloacid dehalogenase-like hydrolase family protein, putative, expressed chr1 42953119 42955602 + downstream 9 LOC_Os10g04880 hypothetical protein gene hypothetical protein chr10 2371159 2371953 - downstream 9 LOC_Os08g07030 hypothetical protein gene hypothetical protein chr8 3939183 3939416 - downstream 9 LOC_Os01g37630 esterase, putative, expressed gene esterase, putative, expressed chr1 21055586 21056995 - downstream 9 LOC_Os07g04780 hypothetical protein gene hypothetical protein chr7 2121763 2122525 - downstream 9 LOC_Os02g21100 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr2 12509464 12515070 + downstream 9 LOC_Os05g02380 hypothetical protein gene hypothetical protein chr5 777513 779852 + downstream 9 LOC_Os12g32480 expressed protein gene expressed protein chr12 19580421 19583398 + downstream 9 LOC_Os08g11340 hypothetical protein gene hypothetical protein chr8 6665565 6667231 - downstream 9 LOC_Os09g16570 hypothetical protein gene hypothetical protein chr9 10170261 10171249 - downstream 9 LOC_Os04g12130 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr4 6673330 6677230 - downstream 9 LOC_Os03g57000 DNA topoisomerase IV subunit A, putative gene DNA topoisomerase IV subunit A, putative chr3 32463055 32465076 + downstream 9 LOC_Os09g11180 hypothetical protein gene hypothetical protein chr9 6196403 6196831 + downstream 9 LOC_Os03g55600 CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed gene CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed chr3 31645571 31651130 + downstream 9 LOC_Os03g20010 nifU, putative, expressed gene nifU, putative, expressed chr3 11270555 11271928 + downstream 9 LOC_Os07g11430 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr7 6290734 6292213 + downstream 9 LOC_Os01g17980 hypothetical protein gene hypothetical protein chr1 10057607 10058873 - downstream 9 LOC_Os03g12860 homeobox associated leucine zipper, putative, expressed gene homeobox associated leucine zipper, putative, expressed chr3 6930707 6932326 + downstream 9 LOC_Os07g39340 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 23565142 23567598 + downstream 9 LOC_Os06g04590 OsSAUR24 - Auxin-responsive SAUR gene family member gene OsSAUR24 - Auxin-responsive SAUR gene family member chr6 1999168 1999570 + downstream 9 LOC_Os12g10940 hypothetical protein gene hypothetical protein chr12 5912672 5913127 + downstream 9 LOC_Os01g08180 BRASSINAZOLE-RESISTANT 2, putative gene BRASSINAZOLE-RESISTANT 2, putative chr1 3961465 3962568 - downstream 9 LOC_Os07g43580 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr7 26074305 26076160 - downstream 9 LOC_Os03g39080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 21717255 21718867 + downstream 9 LOC_Os10g40430 LTPL139 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL139 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr10 21586548 21587344 - downstream 9 LOC_Os05g18930 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr5 10986573 10988834 - downstream 9 LOC_Os02g42980 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr2 25866512 25866909 + downstream 9 LOC_Os11g44450 hypothetical protein gene hypothetical protein chr11 26424443 26425923 + downstream 9 LOC_Os09g09740 hypothetical protein gene hypothetical protein chr9 5270628 5271226 - downstream 9 LOC_Os12g44210 ATPase, AAA family domain containing protein, expressed gene ATPase, AAA family domain containing protein, expressed chr12 27388834 27390398 + downstream 9 LOC_Os05g31210 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 18090110 18094211 + downstream 9 LOC_Os12g09650 hypothetical protein gene hypothetical protein chr12 5090118 5090366 + downstream 9 LOC_Os01g41170 THION27 - Plant thionin family protein precursor, expressed gene THION27 - Plant thionin family protein precursor, expressed chr1 23310127 23311537 - downstream 9 LOC_Os09g12830 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr9 7373109 7376673 + downstream 9 LOC_Os04g55230 tetratricopeptide repeat domain containing protein, putative, expressed gene tetratricopeptide repeat domain containing protein, putative, expressed chr4 32650055 32663367 + downstream 9 LOC_Os08g32940 endoglucanase, putative gene endoglucanase, putative chr8 20426747 20428324 - downstream 9 LOC_Os10g03480 cyclin-dependent kinase G-1, putative, expressed gene cyclin-dependent kinase G-1, putative, expressed chr10 1497125 1498146 - downstream 9 LOC_Os05g28200 prenyltransferase, putative, expressed gene prenyltransferase, putative, expressed chr5 16454551 16460330 + downstream 9 LOC_Os06g42220 TOO MANY MOUTHS precursor, putative, expressed gene TOO MANY MOUTHS precursor, putative, expressed chr6 25346176 25347650 - downstream 9 LOC_Os09g11190 hypothetical protein gene hypothetical protein chr9 6204643 6206169 + downstream 9 LOC_Os07g11650 LTPL164 - Protease inhibitor/seed storage/LTP family protein precursor, expressed gene LTPL164 - Protease inhibitor/seed storage/LTP family protein precursor, expressed chr7 6431381 6432175 - downstream 9 LOC_Os03g21020 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr3 11923186 11928435 - downstream 9 LOC_Os10g37530 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed gene mitochondrial import inner membrane translocase subunit Tim17, putative, expressed chr10 20023987 20025017 - downstream 9 LOC_Os04g44660 hypothetical protein gene hypothetical protein chr4 26252239 26252769 + downstream 9 LOC_Os07g01180 ZOS7-01 - C2H2 zinc finger protein, expressed gene ZOS7-01 - C2H2 zinc finger protein, expressed chr7 108286 109520 + downstream 9 LOC_Os07g04580 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed gene zinc finger C-x8-C-x5-C-x3-H type family protein, expressed chr7 2034173 2035743 - downstream 9 LOC_Os04g51150 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr4 30102025 30104736 - downstream 9 LOC_Os01g38570 hypothetical protein gene hypothetical protein chr1 21662153 21662814 - downstream 9 LOC_Os05g23830 endo-1,4-beta-xylanase, putative gene endo-1,4-beta-xylanase, putative chr5 13639019 13640672 - downstream 9 LOC_Os01g11830 oryzain alpha chain precursor, putative, expressed gene oryzain alpha chain precursor, putative, expressed chr1 6395150 6396294 - downstream 9 LOC_Os06g08110 nodulin, putative, expressed gene nodulin, putative, expressed chr6 3933028 3936230 - downstream 9 LOC_Os09g21070 hypothetical protein gene hypothetical protein chr9 12701497 12701886 + downstream 9 LOC_Os12g34690 hypothetical protein gene hypothetical protein chr12 21027207 21028199 - downstream 9 LOC_Os03g11640 hypothetical protein gene hypothetical protein chr3 6070382 6072151 - downstream 9 LOC_Os05g03150 expressed protein gene expressed protein chr5 1259206 1261977 - downstream 9 LOC_Os09g29430 citrate transporter, putative, expressed gene citrate transporter, putative, expressed chr9 17880818 17884640 + downstream 9 LOC_Os05g09230 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr5 5157467 5160825 - downstream 9 LOC_Os02g49400 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr2 30178061 30185110 + downstream 9 LOC_Os01g47350 enoyl-CoA hydratase/isomerase family protein, putative, expressed gene enoyl-CoA hydratase/isomerase family protein, putative, expressed chr1 27049805 27053560 - downstream 9 LOC_Os02g53340 cyclic nucleotide-gated ion channel, putative, expressed gene cyclic nucleotide-gated ion channel, putative, expressed chr2 32642737 32653908 + downstream 9 LOC_Os01g63010 universal stress protein domain containing protein, putative, expressed gene universal stress protein domain containing protein, putative, expressed chr1 36495026 36497122 - downstream 9 LOC_Os09g12080 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 6817035 6819807 - downstream 9 LOC_Os01g56610 homocysteine S-methyltransferase protein, putative, expressed gene homocysteine S-methyltransferase protein, putative, expressed chr1 32655620 32657437 - downstream 9 LOC_Os07g03400 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 1361061 1366782 - downstream 9 LOC_Os02g52620 expressed protein gene expressed protein chr2 32183382 32184277 + downstream 9 LOC_Os01g53860 hypothetical protein gene hypothetical protein chr1 30960860 30964170 + downstream 9 LOC_Os09g29350 phototropic-responsive NPH3 family protein, putative gene phototropic-responsive NPH3 family protein, putative chr9 17821799 17822254 - downstream 9 LOC_Os04g56820 hypothetical protein gene hypothetical protein chr4 33697068 33697502 + downstream 9 LOC_Os05g46360 possible lysine decarboxylase domain containing protein, expressed gene possible lysine decarboxylase domain containing protein, expressed chr5 26805690 26808511 + downstream 9 LOC_Os02g49620 expressed protein gene expressed protein chr2 30319915 30323597 + downstream 9 LOC_Os03g19140 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 10722958 10723623 + downstream 9 LOC_Os03g45820 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 25871082 25874424 - downstream 9 LOC_Os02g35260 conserved hypothetical protein gene conserved hypothetical protein chr2 21184800 21185279 + downstream 9 LOC_Os11g38765 expressed protein gene expressed protein chr11 22586948 22587371 - downstream 9 LOC_Os01g14200 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 7952423 7963300 + downstream 9 LOC_Os01g40880 hypothetical protein gene hypothetical protein chr1 23122742 23122954 - downstream 9 LOC_Os08g33000 conserved hypothetical protein gene conserved hypothetical protein chr8 20470880 20476240 + downstream 9 LOC_Os11g16400 expressed protein gene expressed protein chr11 9059767 9063567 - downstream 9 LOC_Os01g12230 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed gene peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed chr1 6666854 6669442 - downstream 9 LOC_Os02g14460 peroxidase precursor, putative gene peroxidase precursor, putative chr2 7959781 7960983 + downstream 9 LOC_Os12g34190 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr12 20693538 20693936 + downstream 9 LOC_Os05g46600 hypothetical protein gene hypothetical protein chr5 26911032 26911855 + downstream 9 LOC_Os05g29940 conserved hypothetical protein gene conserved hypothetical protein chr5 17260254 17260775 - downstream 9 LOC_Os01g57570 NADPH-dependent FMN reductase domain containing protein, expressed gene NADPH-dependent FMN reductase domain containing protein, expressed chr1 33263187 33267400 + downstream 9 LOC_Os04g21530 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr4 12166287 12167640 + downstream 9 LOC_Os02g54860 ankyrin repeat-rich protein, putative, expressed gene ankyrin repeat-rich protein, putative, expressed chr2 33589859 33593590 + downstream 9 LOC_Os01g16550 expressed protein gene expressed protein chr1 9393337 9395436 - downstream 9 LOC_Os09g01510 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr9 370137 370370 + downstream 9 LOC_Os02g56010 anthocyanidin 3-O-glucosyltransferase, putative gene anthocyanidin 3-O-glucosyltransferase, putative chr2 34268532 34271081 + downstream 9 LOC_Os01g56100 BSD domain containing protein, expressed gene BSD domain containing protein, expressed chr1 32297811 32301991 + downstream 9 LOC_Os11g09800 hypothetical protein gene hypothetical protein chr11 5237305 5239188 + downstream 9 LOC_Os03g48464 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr3 27596555 27600252 + downstream 9 LOC_Os03g07630 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr3 3876123 3878447 + downstream 9 LOC_Os10g01984 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 613403 628437 - downstream 9 LOC_Os08g08980 cupin domain containing protein, expressed gene cupin domain containing protein, expressed chr8 5227825 5229037 + downstream 9 LOC_Os01g27380 glutathione S-transferase, putative, expressed gene glutathione S-transferase, putative, expressed chr1 15288188 15290289 + downstream 9 LOC_Os11g30770 hypothetical protein gene hypothetical protein chr11 17460600 17461034 + downstream 9 LOC_Os05g28800 LIPLESS1, putative gene LIPLESS1, putative chr5 16825507 16826395 - downstream 9 LOC_Os08g25700 expressed protein gene expressed protein chr8 15635045 15639286 + downstream 9 LOC_Os05g28050 conserved hypothetical protein gene conserved hypothetical protein chr5 16335334 16335996 - downstream 9 LOC_Os07g22760 conserved hypothetical protein gene conserved hypothetical protein chr7 12842392 12842992 - downstream 9 LOC_Os06g47230 coiled-coil domain-containing protein 72, putative, expressed gene coiled-coil domain-containing protein 72, putative, expressed chr6 28638654 28640498 - downstream 9 LOC_Os01g56350 PTAC12, putative, expressed gene PTAC12, putative, expressed chr1 32469230 32475595 + downstream 9 LOC_Os03g09160 hydroxyproline-rich glycoprotein family protein, putative, expressed gene hydroxyproline-rich glycoprotein family protein, putative, expressed chr3 4774567 4775382 + downstream 9 LOC_Os11g19200 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr11 10961502 10964617 + downstream 9 LOC_Os04g32630 hypothetical protein gene hypothetical protein chr4 19486811 19488992 + downstream 9 LOC_Os03g26510 hypothetical protein gene hypothetical protein chr3 15137327 15137593 - downstream 9 LOC_Os04g54970 hypothetical protein gene hypothetical protein chr4 32511499 32512802 - downstream 9 LOC_Os08g09000 Cupin domain containing protein, expressed gene Cupin domain containing protein, expressed chr8 5238002 5239151 + downstream 9 LOC_Os05g40100 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr5 23494367 23495757 + downstream 9 LOC_Os11g32580 chalcone synthase, putative, expressed gene chalcone synthase, putative, expressed chr11 18760423 18762187 - downstream 9 LOC_Os09g04090 hypothetical protein gene hypothetical protein chr9 2116169 2121452 + downstream 9 LOC_Os03g43880 PLA IIIA/PLP7, putative, expressed gene PLA IIIA/PLP7, putative, expressed chr3 24614401 24616002 - downstream 9 LOC_Os06g03960 hypothetical protein gene hypothetical protein chr6 1598329 1600781 - downstream 9 LOC_Os12g16770 conserved hypothetical protein gene conserved hypothetical protein chr12 9609222 9611145 - downstream 9 LOC_Os03g05580 hypothetical protein gene hypothetical protein chr3 2792540 2793220 + downstream 9 LOC_Os08g31420 MBTB26 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed gene MBTB26 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed chr8 19433345 19434757 - downstream 9 LOC_Os02g01290 expressed protein gene expressed protein chr2 163311 164372 - downstream 9 LOC_Os02g07420 splicing factor, arginine/serine-rich 12, putative, expressed gene splicing factor, arginine/serine-rich 12, putative, expressed chr2 3830478 3832332 - downstream 9 LOC_Os03g07690 hypothetical protein gene hypothetical protein chr3 3909469 3909903 + downstream 9 LOC_Os10g40740 helix-loop-helix DNA-binding domain containing protein, expressed gene helix-loop-helix DNA-binding domain containing protein, expressed chr10 21791484 21796143 - downstream 9 LOC_Os01g71640 conserved hypothetical protein gene conserved hypothetical protein chr1 41523468 41524410 + downstream 9 LOC_Os01g05250 expressed protein gene expressed protein chr1 2473556 2474156 + downstream 9 LOC_Os01g28460 retrotransposon, putative, centromere-specific gene retrotransposon, putative, centromere-specific chr1 15944478 15946072 + downstream 9 LOC_Os11g39770 hypothetical protein gene hypothetical protein chr11 23239154 23239791 - downstream 9 LOC_Os01g45290 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr1 25707272 25713945 + downstream 9 LOC_Os11g31730 hypothetical protein gene hypothetical protein chr11 18139507 18140219 + downstream 9 LOC_Os06g10170 flavin-containing monooxygenase family protein, putative, expressed gene flavin-containing monooxygenase family protein, putative, expressed chr6 5207682 5211331 - downstream 9 LOC_Os07g05880 OsFBK18 - F-box domain and kelch repeat containing protein, expressed gene OsFBK18 - F-box domain and kelch repeat containing protein, expressed chr7 2823322 2825638 - downstream 9 LOC_Os03g57940 CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed gene CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed chr3 32992372 32999768 + downstream 9 LOC_Os09g24860 hypothetical protein gene hypothetical protein chr9 14840072 14840437 + downstream 9 LOC_Os10g34890 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr10 18551565 18556573 - downstream 9 LOC_Os11g37140 conserved hypothetical protein gene conserved hypothetical protein chr11 21459737 21462017 - downstream 9 LOC_Os07g37590 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr7 22520298 22522065 - downstream 9 LOC_Os03g03530 expressed protein gene expressed protein chr3 1524176 1526100 - downstream 9 LOC_Os04g12960 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed gene UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed chr4 7148971 7151370 - downstream 9 LOC_Os05g37050 MYB family transcription factor, putative, expressed gene MYB family transcription factor, putative, expressed chr5 21587694 21588499 - downstream 9 LOC_Os09g33760 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr9 19938391 19938945 + downstream 9 LOC_Os05g06960 hypothetical protein gene hypothetical protein chr5 3643034 3643718 + downstream 9 LOC_Os10g18860 retrotransposon protein, putative, Ty1-copia subclass gene retrotransposon protein, putative, Ty1-copia subclass chr10 9539340 9543565 - downstream 9 LOC_Os04g54570 transferase family protein, putative gene transferase family protein, putative chr4 32268157 32270106 - downstream 9 LOC_Os06g35730 ribosomal protein L5, putative, expressed gene ribosomal protein L5, putative, expressed chr6 20850111 20852752 - downstream 9 LOC_Os02g30960 transposon protein, putative, Ac/Ds sub-class gene transposon protein, putative, Ac/Ds sub-class chr2 18489698 18492227 - downstream 9 LOC_Os01g68090 harpin-induced protein 1 domain containing protein gene harpin-induced protein 1 domain containing protein chr1 39581312 39582679 - downstream 9 LOC_Os03g10810 HLS, putative, expressed gene HLS, putative, expressed chr3 5537698 5539321 - downstream 9 LOC_Os11g31800 hypothetical protein gene hypothetical protein chr11 18195176 18200246 - downstream 9 LOC_Os02g44111 sec20 domain containing protein, expressed gene sec20 domain containing protein, expressed chr2 26657394 26661813 - downstream 9 LOC_Os03g54030 transposon protein, putative, CACTA, En/Spm sub-class, expressed gene transposon protein, putative, CACTA, En/Spm sub-class, expressed chr3 30966336 30970903 - downstream 9 LOC_Os11g35080 expressed protein gene expressed protein chr11 20100430 20101714 - downstream 9 LOC_Os05g45210 respiratory burst oxidase, putative, expressed gene respiratory burst oxidase, putative, expressed chr5 26174822 26183256 - downstream 9 LOC_Os08g43110 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr8 27252778 27257301 + downstream 9 LOC_Os04g56900 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr4 33740448 33742020 + downstream 9 LOC_Os05g28320 myb-like DNA-binding domain containing protein, putative, expressed gene myb-like DNA-binding domain containing protein, putative, expressed chr5 16524652 16525769 - downstream 9 LOC_Os06g36330 MATE domain containing protein, expressed gene MATE domain containing protein, expressed chr6 21314875 21316581 - downstream 9 LOC_Os03g25550 myb-like DNA-binding domain containing protein, putative gene myb-like DNA-binding domain containing protein, putative chr3 14596855 14598259 - downstream 9 LOC_Os11g35380 conserved hypothetical protein gene conserved hypothetical protein chr11 20267698 20268255 - downstream 9 LOC_Os05g09280 AGAP006957-PA, putative, expressed gene AGAP006957-PA, putative, expressed chr5 5187735 5189732 - downstream 9 LOC_Os01g04760 hypothetical protein gene hypothetical protein chr1 2161723 2161971 - downstream 9 LOC_Os01g27160 cullin, putative, expressed gene cullin, putative, expressed chr1 15145058 15151492 + downstream 9 LOC_Os11g33360 hypothetical protein gene hypothetical protein chr11 19276127 19277791 + downstream 9 LOC_Os03g07910 nitrilase, putative, expressed gene nitrilase, putative, expressed chr3 4023332 4027524 + downstream 9 LOC_Os08g01110 expressed protein gene expressed protein chr8 77198 83427 + downstream 9 LOC_Os09g34920 glycosyl hydrolase family 29, putative, expressed gene glycosyl hydrolase family 29, putative, expressed chr9 20348458 20350420 - downstream 9 LOC_Os09g11370 expressed protein gene expressed protein chr9 6322254 6322796 + downstream 9 LOC_Os01g68210 hypothetical protein gene hypothetical protein chr1 39642649 39643800 - downstream 9 LOC_Os03g17760 RNA recognition motif containing protein, putative, expressed gene RNA recognition motif containing protein, putative, expressed chr3 9876961 9879866 - downstream 9 LOC_Os05g48600 glycosyltransferase family 43 protein, putative, expressed gene glycosyltransferase family 43 protein, putative, expressed chr5 27797932 27802412 + downstream 9 LOC_Os02g48280 expressed protein gene expressed protein chr2 29542503 29542955 + downstream 9 LOC_Os10g04910 hypothetical protein gene hypothetical protein chr10 2400642 2403392 - downstream 9 LOC_Os07g41564 DEAD/DEAH box helicase domain protein, putative gene DEAD/DEAH box helicase domain protein, putative chr7 24907638 24914950 + downstream 9 LOC_Os12g02460 transposon protein, putative, unclassified gene transposon protein, putative, unclassified chr12 828515 830650 - downstream 9 LOC_Os04g33700 ABC transmembrane transporter domain containing protein, expressed gene ABC transmembrane transporter domain containing protein, expressed chr4 20234050 20238450 - downstream 9 LOC_Os04g05400 conserved hypothetical protein gene conserved hypothetical protein chr4 2700727 2703036 - downstream 9 LOC_Os03g58130 thioredoxin, putative, expressed gene thioredoxin, putative, expressed chr3 33089041 33092635 + downstream 9 LOC_Os07g11680 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 6458221 6465656 - downstream 9 LOC_Os04g55940 sodium/calcium exchanger protein, putative, expressed gene sodium/calcium exchanger protein, putative, expressed chr4 33129520 33134265 + downstream 9 LOC_Os06g44770 hypothetical protein gene hypothetical protein chr6 27045715 27046929 - downstream 9 LOC_Os02g31140 major ampullate spidroin 2-2, putative, expressed gene major ampullate spidroin 2-2, putative, expressed chr2 18633267 18636019 - downstream 9 LOC_Os11g04280 zinc finger, C3HC4 type domain containing protein gene zinc finger, C3HC4 type domain containing protein chr11 1751235 1751891 - downstream 9 LOC_Os06g35070 hypothetical protein gene hypothetical protein chr6 20415539 20416236 - downstream 9 LOC_Os02g15310 RNA recognition motif containing protein, expressed gene RNA recognition motif containing protein, expressed chr2 8553856 8558164 - downstream 9 LOC_Os02g29240 hypothetical protein gene hypothetical protein chr2 17372797 17373081 + downstream 9 LOC_Os04g32240 retrotransposon, putative, centromere-specific, expressed gene retrotransposon, putative, centromere-specific, expressed chr4 19148760 19150292 + downstream 9 LOC_Os03g41390 ZOS3-15 - C2H2 zinc finger protein, expressed gene ZOS3-15 - C2H2 zinc finger protein, expressed chr3 23034716 23035925 - downstream 9 LOC_Os11g07910 transmembrane 9 superfamily member, putative, expressed gene transmembrane 9 superfamily member, putative, expressed chr11 4072807 4079376 + downstream 9 LOC_Os06g03370 retrotransposon protein, putative, Ty3-gypsy subclass gene retrotransposon protein, putative, Ty3-gypsy subclass chr6 1283505 1286411 - downstream 9 LOC_Os11g43710 hypothetical protein gene hypothetical protein chr11 25922099 25923977 - downstream 9 LOC_Os09g09540 transposon protein, putative, unclassified, expressed gene transposon protein, putative, unclassified, expressed chr9 5149258 5153230 - downstream 9 LOC_Os02g43540 retrotransposon protein, putative, unclassified, expressed gene retrotransposon protein, putative, unclassified, expressed chr2 26265810 26266788 + downstream 9 LOC_Os04g53970 hypothetical protein gene hypothetical protein chr4 31967742 31970038 - downstream 9 LOC_Os07g34700 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr7 20795088 20796729 - downstream 9 LOC_Os10g39190 B3 DNA binding domain containing protein gene B3 DNA binding domain containing protein chr10 20844640 20845578 - downstream 9 LOC_Os04g46444 hypothetical protein gene hypothetical protein chr4 27359277 27360161 + downstream 9 LOC_Os11g32070 conserved hypothetical protein gene conserved hypothetical protein chr11 18432778 18434171 + downstream 9 LOC_Os03g51440 LRR receptor-like protein kinase, putative, expressed gene LRR receptor-like protein kinase, putative, expressed chr3 29419386 29423955 - downstream 9 LOC_Os02g37000 mitochondrial prohibitin complex protein 1, putative, expressed gene mitochondrial prohibitin complex protein 1, putative, expressed chr2 22341194 22342316 - downstream 9 LOC_Os10g20980 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr10 10550890 10554376 + downstream 9 LOC_Os03g22740 nucleolar protein NOP5-1, putative gene nucleolar protein NOP5-1, putative chr3 13132524 13135898 - downstream 9 LOC_Os04g47830 SNF2 family N-terminal domain containing protein, expressed gene SNF2 family N-terminal domain containing protein, expressed chr4 28194525 28201706 + downstream 9 LOC_Os10g18280 cysteine-rich receptor-like protein kinase 7 precursor, putative gene cysteine-rich receptor-like protein kinase 7 precursor, putative chr10 9213147 9214795 - downstream 9 LOC_Os03g15200 conserved hypothetical protein gene conserved hypothetical protein chr3 8320326 8320526 + downstream 9 LOC_Os01g53760 hypothetical protein gene hypothetical protein chr1 30901700 30902014 - downstream 9 LOC_Os11g25260 nucleoside-triphosphatase, putative, expressed gene nucleoside-triphosphatase, putative, expressed chr11 13926565 13934440 - downstream 9 LOC_Os10g06490 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 3335767 3338191 - downstream 9 LOC_Os10g26300 retrotransposon protein, putative, unclassified gene retrotransposon protein, putative, unclassified chr10 13553364 13553774 + downstream 9 LOC_Os10g18470 hypothetical protein gene hypothetical protein chr10 9312837 9313391 - downstream 9 LOC_Os12g11340 transposon protein, putative, CACTA, En/Spm sub-class gene transposon protein, putative, CACTA, En/Spm sub-class chr12 6111643 6116727 - downstream 9 LOC_Os06g15250 3-ketoacyl-CoA synthase, putative gene 3-ketoacyl-CoA synthase, putative chr6 8644292 8645806 - downstream 9 LOC_Os04g50990 L11 domain containing ribosomal protein, putative, expressed gene L11 domain containing ribosomal protein, putative, expressed chr4 29995185 29996923 + downstream 9 LOC_Os01g14270 OsFBX4 - F-box domain containing protein gene OsFBX4 - F-box domain containing protein chr1 7996491 8002010 - downstream 9 LOC_Os08g23940 hypothetical protein gene hypothetical protein chr8 14480743 14481652 - downstream 9 LOC_Os09g35770 transposon protein, putative, Mutator sub-class gene transposon protein, putative, Mutator sub-class chr9 20575896 20578473 - downstream 9 LOC_Os12g04400 hypothetical protein gene hypothetical protein chr12 1866002 1866811 + downstream 9 LOC_Os03g54820 hypothetical protein gene hypothetical protein chr3 31158571 31159566 + downstream 9 LOC_Os02g28170 transferase family protein, putative, expressed gene transferase family protein, putative, expressed chr2 16672274 16674187 - downstream 9 LOC_Os01g42760 integral membrane protein TmpA, putative, expressed gene integral membrane protein TmpA, putative, expressed chr1 24333336 24335114 + downstream 9 LOC_Os09g28190 hypothetical protein gene hypothetical protein chr9 17105645 17106890 + downstream 9 LOC_Os08g07520 hypothetical protein gene hypothetical protein chr8 4219052 4219414 - downstream 9 LOC_Os04g24830 hypothetical protein gene hypothetical protein chr4 14274160 14276483 + downstream 9 LOC_Os01g40540 lectin receptor-type protein kinase, putative gene lectin receptor-type protein kinase, putative chr1 22898785 22899273 + downstream 9 LOC_Os01g15700 transposon protein, putative, Pong sub-class gene transposon protein, putative, Pong sub-class chr1 8828544 8833069 + downstream 9 LOC_Os09g31380 jmjC domain-containing protein 5, putative gene jmjC domain-containing protein 5, putative chr9 18862285 18866497 - downstream 9 LOC_Os01g62920 homeodomain protein, putative, expressed gene homeodomain protein, putative, expressed chr1 36443976 36448908 - downstream 9 LOC_Os06g11870 hypothetical protein gene hypothetical protein chr6 6308926 6309282 - downstream 9 LOC_Os02g45360 hypothetical protein gene hypothetical protein chr2 27561322 27562314 - downstream 9 LOC_Os05g40030 hypothetical protein gene hypothetical protein chr5 23449216 23449659 - downstream