agriGO - single species analysis

Xenopus laevis Singular Enrichment Analysis (SEA)

1. Select analysis tool:

Singular Enrichment Analysis (SEA)

Parametric Analysis of Gene Set Enrichment (PAGE)

searching for genes or GO terms

SEA is a traditional and widely used method. User only needs to prepare a list of gene/probe names, and enrichment GO terms will be found out after statistical test from pre_calculated background or customized one.

2. Input a gene list:


<allowed ID types in Xenopus_laevis>
locus ID (DFIC)  (eg.TC416578)

3. Select reference:

Suggested backgrounds

Customized reference [ Example ]

For each species, suggested backgrounds are provided. These backgrounds are all pre_computated, and are available to download. To those species without a relatively completed GO profile, backgrounds from near organisms are used as suggestion. If you don't like these backgrounds, then you may submit your customized with/without GO annotation.

Xenopus laevis Singular Enrichment Analysis (SEA)

1. Select analysis tool:

Singular Enrichment Analysis (SEA)

Parametric Analysis of Gene Set Enrichment (PAGE)

searching for genes or GO terms

2. Input a gene list:

3. Select reference:

4. Advanced options (optional):